These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8878#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1080 fasta sequence [TCTCAGTGGTTAGTTGCATCGAATTTAGTGGACCGTAACATTTCAGTTGCAAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAACTCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAA-GGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC-GGAAG-AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA-AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC-GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC-GGAC-GTCCTGACCGG-CGGCAGCACACTGGCGACGGTGGCCATCGA-CGGGG-CGAAGGTT-GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA-C-C--GCAATCAGGGCTGCGATATGCTGATCTACC-CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCACTGGAGAAGTAG-GCCGTGAATGCCATTTT-TAAAAAAAAAACG-TGTTGAAAATATACAGACAT] [+] EMBL CNS08UP1 [TCTCAGTGGTTAGTTGCATCGAATTTAGTGGACCGTAACATTTCAGTTGCAAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAACTCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTCGCGGACAAGGGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGGAAGCAGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCACACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C C GCAATCAGGGCTGCGATATGCTGATCTACC CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATAT ] [+] EMBL AL694520 [ ccgaggttAATTTAGTGGACCGCAACATTTCAGTTGCAAAGAATCCCGAAGTGTCTAGCAAAGCGAACCACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCTCCGTGGCGGACAA GGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAACAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGG AAAATGTCGTACGGACAGCAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGA GTACCG AAAATCCATCTGTTCGACATCAACATTCCGGGCGGGATTACGTTCCGCGAGTCTGGACGGTCCTGACCGGCCGGCAGCACACTGGCGACGGTGGCCATCGACCGGGGCCGAAGGTTGGGCCTNGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C CTGGAAATCAG ] [+] EMBL CNS08TH8 [ CGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAACTCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTCGCGGACAA GGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCACACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C C GCAATCAGGGCTGCGATATGCTGATCTACC CGGG ] [+] EMBL BX623667 [ TTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAA GGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGTCGTACGGACAGCAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGCGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCACACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCATCTGCTACGACATGCGGTTCGACGAGCTGGCAAGGCTGTA C C GCAATCAGGGCTGCGATATGTTGATCTACC CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAG ] [+] EMBL BX604788 [ CTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAA GGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGG ] [-] EMBL CNS08UP2 [ CGGACAA GGGTGCACGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGC GGAAG AGATACCGTCCGGTGAGACGAGCCGCCACCTGGCGGAAATCGCGAA AGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCC GGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTC GGAC GTCCTGACCGG CGGCAGCAAACTGGCGACGGTGGCCATCGA CGGGG CGAAGGTT GGCCTTGGCTTCTGCTACGACATGCGGTTCGACGGGCTGGCAAGGCTGTAGCGC GCAATCAGGGCTGCGATATGCTGATCTACCTCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCACTGGAGAAGTAGTGCCGTGAATGCCATTTTGTAAAAAAAAAACGTTGTTGAAAATATACAGACAT] [-] EMBL CNS08TH9 [ CC CGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCAAACGATACGCATTCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCGGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCCGAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAAGTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCACTGGAGAAGAAG GCCCGGAATGCCATTTT TAAAAAAAAAACG TGTTGAGAATA ] consensusID : consensus_8878#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 762 fasta sequence [GAATNGCCCGAGGATTCAGTTGAAAATAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCTGCACTGCGTAAATGAACAGGATGTGCACGCTGCCGGTTTCCTGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCTGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACTGCTCCTGCCGTGGCTGGACGAAGGGTGCTCGCGTGGTAGCTGCTGGCCGAATGTTTCAACTCCCCGTACGGTACTGCAACACTTTCCTGGCTGTACTGCGGAAGGAGATACCGTCCGGTGAGACTGAGCCGNAGCCTGGCGGCAATCGCCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACCGATTCCCGTGTAGAAAATGCCTGTACAGTGACATGCAAGCTGTACAACACCCTGTACGGTATGGTCGCCGGAAGTGGGTCCCTGACTTGGGCTGACGTACCGNNAAAATCCCATACTGTTTGACATTCAACCATTTACCCGTGGGGCAGGGGAATTTACCGTTTCCCGCAGGAANGTTCTGNGAACCGTTACCTTGNAACCCAGCGCGNGCATGCAACAACTTTGGGGCGCACCGGGTNGTGCCCCCAATCNGAANCGNCGGCGAAACAGGTNGGAGACCTCTTGTGGCATCATTGGCNTAACACGAACNATTGGCCGGTATCGCAA] [+] EMBL AL931183 [GAATNGCCCGAGGATTCAGTTGAAAATAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCTGCACTGCGTAAATGAACAGGATGTGCACGCTGCCGGTTTCCTGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCTGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACTGCTCCTGCCGTGGCTGGACGAAGGGTGCTCGCGTGGTAGCTGCTGGCCGAATGTTTCAACTCCCCGTACGGTACTGCAACACTTTCCTGGCTGTACTGCGGAAGGAGATACCGTCCGGTGAGACTGAGCCGNAGCCTGGCGGCAATCGCCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACCGATTCCCGTGTAGAAAATGCCTGTACAGTGACATGCAAGCTGTACAACACCCTGTACGGTATGGTCGCCGGAAGTGGGTCCCTGACTTGGGCTGACGTACCGNNAAAATCCCATACTGTTTGACATTCAACCATTTACCCGTGGGGCAGGGGAATTTACCGTTTCCCGCAGGAANGTTCTGNGAACCGTTACCTTGNAACCCAGCGCGNGCATGCAACAACTTTGGGGCGCACCGGGTNGTGCCCCCAATCNGAANCGNCGGCGAAACAGGTNGGAGACCTCTTGTGGCATCATTGGCNTAACACGAACNATTGGCCGGTATCGCAA] consensusID : consensus_8878#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 755 fasta sequence [AGAATCGCCCGAGNTAACATTTCAGTTGCAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGNGGTACGATTTCCGGAANAANTGCCGTACGGACAGTAAGGCTGTACAACACCGTTGTACCTGTGTGGTCGCCGGNAGGGGTCCCTGCTGGCGGACGGCTACCGGCGATAAACTCCGATCTGTCGACCATTCAGACATTCCGGAGGTGGGGATTACCGTACCCCGGCGAAGGTCGGGACGGTTCCGAACCGCCGGCAGTAAACTTGGCGAAAGNGNGTGGGCCATCGANCTGGGGGCGCAAGGTTGGCCTTGGGCATNCTGGCTAAAGGANAAATNCNNGGTTTGACGAAGCGCTGGGCCNAGGCGNTACCGGACACTAGGCTGCGAAAATNCNGNTCAC] [+] EMBL AL934754 [AGAATCGCCCGAGNTAACATTTCAGTTGCAAGAATCCCGAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAACCCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGNGGTACGATTTCCGGAANAANTGCCGTACGGACAGTAAGGCTGTACAACACCGTTGTACCTGTGTGGTCGCCGGNAGGGGTCCCTGCTGGCGGACGGCTACCGGCGATAAACTCCGATCTGTCGACCATTCAGACATTCCGGAGGTGGGGATTACCGTACCCCGGCGAAGGTCGGGACGGTTCCGAACCGCCGGCAGTAAACTTGGCGAAAGNGNGTGGGCCATCGANCTGGGGGCGCAAGGTTGGCCTTGGGCATNCTGGCTAAAGGANAAATNCNNGGTTTGACGAAGCGCTGGGCCNAGGCGNTACCGGACACTAGGCTGCGAAAATNCNGNTCAC] consensusID : consensus_8878#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 737 fasta sequence [ACGCTTCCCTTGTTTGCTGCCCTATTTTTACAGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACCGGCGGCAGTACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGCTACGACATGCGGTTTGACGAGCTGGCCAGGCTGTACCGCAATCAGGGCTGCGATATGCTGATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCGAACGATACGCAATCGTACGTGGCGACCATTTCGCCGGCACGCGACCCAGCCGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCATC] [+] EMBL BX605229 [ACGCTTCCCTTGTTTGCTGCCCTATTTTTACAGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACAAGCCGCAGCCTGGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGCCGTACGGACAGTAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACCGGCGGCAGTACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGCTACGACATGCGGTTTGACGAGCTGGCCAGGCTGTACCGCAATCAGGGCTGCGATATGCTGATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGGGGCCGTGCGAACGATACGCAATCGTACGTGGCGACCATTTCGCCGGCACGCGACCCAGCCGCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCATC] consensusID : consensus_8878#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 610 fasta sequence [GCCAGCAGATCCCGAGGTTTTGTTGAAATAATCCGAANTGTTAGCAAGCGAAACATTAACTGTACATTTCTTCTCTTTCTCTGTGCTCAACCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGACAAAATCGAGCGCTGGCAAAATACGCTCCGCGTGGGGNCAAGGTGTCGGTGGTAGCGCTGCCGAATGTTCAAATCCCCGTACGGTACGCAACACTTTCCGGGGTACGCGGAAAGAGGATACCGTCCGGTTGAGGACGAAGCCCGAAGACCTTGGGNGGNCACACTCGCGACACAGAGCTCGGAATCTTATCNTGATTACGGGGNGTACGAATTCCCGGTGAAAAANTTGCCCGTCACGGCAACACGCACACGACTGTACAAANAACNTGGTAAGGATNATTGGNTCGGACCGAAGGGNTCCCCTGCTNGGAGAACCGTACCANGAAAAAACACAATCCTTGTTNTGAAAATTCCAACAATTTCCCGAGGGCCGGGACATATACCAGTNCACGGACATGTC] [+] EMBL AL696026 [GCCAGCAGATCCCGAGGTTTTGTTGAAATAATCCGAANTGTTAGCAAGCGAAACATTAACTGTACATTTCTTCTCTTTCTCTGTGCTCAACCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCGCACTGCGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGACAAAATCGAGCGCTGGCAAAATACGCTCCGCGTGGGGNCAAGGTGTCGGTGGTAGCGCTGCCGAATGTTCAAATCCCCGTACGGTACGCAACACTTTCCGGGGTACGCGGAAAGAGGATACCGTCCGGTTGAGGACGAAGCCCGAAGACCTTGGGNGGNCACACTCGCGACACAGAGCTCGGAATCTTATCNTGATTACGGGGNGTACGAATTCCCGGTGAAAAANTTGCCCGTCACGGCAACACGCACACGACTGTACAAANAACNTGGTAAGGATNATTGGNTCGGACCGAAGGGNTCCCCTGCTNGGAGAACCGTACCANGAAAAAACACAATCCTTGTTNTGAAAATTCCAACAATTTCCCGAGGGCCGGGACATATACCAGTNCACGGACATGTC] consensusID : consensus_8878#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 508 fasta sequence [CCAGGCTTTNAATCCGAAGTGTTAGCAAAGCGAACACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAACCCTGATNCGGAAAGTTTGTGCAATTCATCCCAACTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGNTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACGAGCCGCAGCCTGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGTCGTACGGACAGCCAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAAC] [+] EMBL AL930966 [CCAGGCTTTNAATCCGAAGTGTTAGCAAAGCGAACACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAACCCTGATNCGGAAAGTTTGTGCAATTCATCCCAACTTCAGCGCACTACGTAAATGAACAGGATGGCACGCGCCGGTTTCCGAATTGNTCTGCTTCAGCTAAAAGTCGGAGCCGACAAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACGCTCCGCCGTGGCGGACAAGGGTGCTCGCGTGGTAGCGCTGCCCGAATGTTTCAACTCCCCGTACGGTACGCAACACTTTCCGGCGTACGCGGAAGAGATACCGTCCGGTGAGACGAGCCGCAGCCTGCGGCAATCGCGAAAGAGCTCGGCATCTATCTGATCGGCGGTACGATTCCGGAAAAATGTCGTACGGACAGCCAAGCTGTACAACACCTGTACCGTGTGGTCGCCGGAAGGGTCCCTGCTGGCGACGTACCGCAAAATCCATCTGTTCGACATCAAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8878#1 ----------------------GAATNGCCCGAGGA-----TTCAGTTGAAAATAATCCC 33 consensus_8878#4 ------------------GCCAGCAGATCCCGAGGT-----TTT-GTTGAAA-TAATCC- 34 consensus_8878#5 ------------------------------CCAGGC-----TTT---------NAATCC- 15 consensus_8878#2 ---------------------AGAATCGCCCGAGNTAACATTTCAGTTGCAA-GAATCCC 38 consensus_8878#0 TCTCAGTGGTTAGTTGCATCGAATTTAGTGGACCGTAACATTTCAGTTGCAAAGAATCCC 60 consensus_8878#3 ------------------------------------------------------------ consensus_8878#1 GAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAAC 93 consensus_8878#4 GAANTGT-TAGCAA-GCGAAACATTAACTGTAC-ATTTCTTCTCTTTCTCTGTGCTCAAC 91 consensus_8878#5 GAAGTGT-TAGCAAAGCGAA-CACAAACTGTGTTATTTCTTCTCTTTCTCTGTGCTCAAC 73 consensus_8878#2 GAAGTGTCTAGCAAAGCGAACCATTAACTGTACCATTTCTTCTCTTTCTCTGTGCTCAAC 98 consensus_8878#0 GAAGTGTCTAGCAAAGCGAACCATTAACTGTGCCATTTCTTCTCTTTCTCTGTGCTCAAC 120 consensus_8878#3 ------------------------------------------------------------ consensus_8878#1 CCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGCTGCACTGCGTAAATGAACA 153 consensus_8878#4 C-TGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGC-GCACTGCGTAAATGAACA 149 consensus_8878#5 CCTGATNCGGAAAGTTTGTGCAATTCATCCCAAC-TTCAGC-GCACTACGTAAATGAACA 131 consensus_8878#2 CCTGATCCGGAAAGTTTGTGCAATTCATCCCAACCTTCAGC-GCACTGCGTAAATGAACA 157 consensus_8878#0 TCTGACCCGGAAAGTTTGGTCAATTTATCCCAACCTTCAGCGCACTGCGTAAATGAACAG 180 consensus_8878#3 -------------------------------------ACGCTTCCCTTGTTTGCTGCCCT 23 ** consensus_8878#1 GGATGTGCACGCTGCCGGTTTCCTGAATTGCTCTGCTTCAGCTAAAAGTCGGAGCCTGAC 213 consensus_8878#4 GGATG-GCACGC-GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 205 consensus_8878#5 GGATG-GCACGC-GCCGGTTTCC-GAATTGNTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 187 consensus_8878#2 GGATG-GCACGC-GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 213 consensus_8878#0 GATGG--CACGC-GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 235 consensus_8878#3 ATTTT--TACA--GCCGGTTTCC-GAATTGCTCTGCTTCAGCTAAAAGTCGGAGCC-GAC 77 ** ********** ****** ************************* *** consensus_8878#1 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATACTGCTCCTGCCGTGGCTGGACGAA 273 consensus_8878#4 AAGG-ACAAA--ATCGA----GCGCTGGC-AAAATAC-GCTCC--GCGTGG--GGNCAAG 252 consensus_8878#5 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 244 consensus_8878#2 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 270 consensus_8878#0 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 292 consensus_8878#3 AAGGCACAAAACATCGAAAACGCGCTGGCCAAAATAC-GCTCC-GCCGTGGC-GGACAAG 134 **** ***** ***** ******** ******* ***** ***** ** * * consensus_8878#1 GGGTGCTCGCGTGGTAGCTGCTGGCCGAATGTTTCAACTCCCCGTACGGTACTGCAACAC 333 consensus_8878#4 GTG---TCG-GTGGTAGC-GCTG-CCGAATGTT-CAAATCCCCGTACGGTAC-GCAACAC 304 consensus_8878#5 G-GTGCTCGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 301 consensus_8878#2 G-GTGCTCGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 327 consensus_8878#0 G-GTGCACGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 349 consensus_8878#3 G-GTGCTCGCGTGGTAGC-GCTGCCCGAATGTTTCAACTCCCCGTACGGTAC-GCAACAC 191 * * ** ******** **** ********* *** ************** ******* consensus_8878#1 TTTCCTGGCTGTACTGCGGAAGGAGATACCGTCCGGT--GAGACTGAGCC-GNAGCC--- 387 consensus_8878#4 TTTCCGGG--GTACGCGGAAAGAGGATACCGTCCGGTTGAGGACGAAGCCCGAAGACCTT 362 consensus_8878#5 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-GAGCC-GCAGCC--- 350 consensus_8878#2 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-AAGCC-GCAGCC--- 376 consensus_8878#0 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-GAGCC-GCAGCC--- 398 consensus_8878#3 TTTCCGGC--GTACGCGGAA--GAGATACCGTCCGGT--GAGAC-AAGCC-GCAGCC--- 240 ***** * **** * * ************* *** **** * ** * consensus_8878#1 ---TGGCGGCAATCGCCGAA-AGAGCTCGGCATCTA--TCTGATC---GGCGGTACCGAT 438 consensus_8878#4 GGGNGGNCACACTCGCGACACAGAGCTCGGAATCTTATCNTGATTACGGGGNGTACGAAT 422 consensus_8878#5 ----TGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGCGGTAC-GAT 398 consensus_8878#2 ---TGGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGNGGTACGATT 426 consensus_8878#0 ---TGGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGCGGTAC-GAT 447 consensus_8878#3 ---TGGCGGCAATCGCGAAA--GAGCTCGGCATCTA--TCTGATC---GGCGGTAC-GAT 289 * ** **** * ******** **** **** ** **** * consensus_8878#1 TCCCG-TGTAGAAAATGCCTGT-ACAGTGACATGCA---AGCTGTACAA-CACCCTGTAC 492 consensus_8878#4 TCCCGGTGAAAAANTTGCCCGTCACGGCAACACGCACACGACTGTACAAANAACNTGGTA 482 consensus_8878#5 TCCGG-----AAAAATGTC-GT-ACGG--ACAGCCA---AGCTGTACAA--CACCTGTAC 444 consensus_8878#2 TCCGG----AANAANTGCC-GT-ACGG--ACAGTAA---GGCTGTACAACACCGTTGTAC 475 consensus_8878#0 TCCGG-----AAAAATGCC-GT-ACGG--ACAGTAA----GCTGTACAA--CACCTGTAC 492 consensus_8878#3 TCCGG-----AAAAATGCC-GT-ACGG--ACAGTAA----GCTGTACAA--CACCTGTAC 334 *** * * ** * ** ** * *** * ******** ** consensus_8878#1 G-GTATGGTCG--CCGGA---AGTGGGTCCCTGACTTGGGCTGACGTACC--GNNAAAAT 544 consensus_8878#4 A-GGATNATTGGNTCGGACCGAAGGGNTCCCCTGCTNGGAGAACCGTACCANGAAAAAAC 541 consensus_8878#5 C-GTGTGGTCG--CCGGA-----AGGGTCCCT-GCTGG---CGACGTACC--GCAAAATC 490 consensus_8878#2 CTGTGTGGTCG--CCGGN----AGGGGTCCCT-GCTGGCGGACGGCTACCGGCGATAAAC 528 consensus_8878#0 C-GTGTGGTCG--CCGGA-----AGGGTCCCT-GCTGG---CGACGTACC--GCAAAATC 538 consensus_8878#3 C-GTGTGGTCG--CCGGA-----AGGGTCCCT-GCTGG---CGACGTACC--GCAAAATC 380 * * * * *** ** **** ** * **** ** consensus_8878#1 CCCATACTGTTTG---ACATTCAA------CCATTTACCCGTGGGGCAGGGGAATTTACC 595 consensus_8878#4 ACAATCCTTGTTNTGAAAATTCCA------ACAATTTCCCG-AGGGCCGGGACATATACC 594 consensus_8878#5 CATCTGTTCGACATCAAC------------------------------------------ 508 consensus_8878#2 TCCGATCTGTCGAC---CATTCAG------ACATTCCGGAGGTGGGGATTACCGTACCCC 579 consensus_8878#0 CATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACC 598 consensus_8878#3 CATCTGTTCGACATCAACATTCCGGGTGGGATTACGTTCCGCGAGTCGGACGTCCTGACC 440 * consensus_8878#1 GTTTCCCGCAGGAANGTTCTGNGAACCGTTACCTTGNAACCCAGCGCGNGCATG-----C 650 consensus_8878#4 AGTNCACG--GACATGTC------------------------------------------ 610 consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 GGCGAAGGTCGGGACGGTTC-CGAACCGCCGGCAGTAAACTTGGCGAAAGNGNGTGGGCC 638 consensus_8878#0 GGCGGCAGCACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGC 658 consensus_8878#3 GGCGGCAGTACACTGGCGACGGTGGCCATCGACGGGGCGAAGGTTGGCCTTGGCATCTGC 500 consensus_8878#1 AACAACTTTGGGGCGCACCGGGTNGTGCCCCCAATCNG-AANCGNCGGCGAAACAGGTNG 709 consensus_8878#4 ------------------------------------------------------------ consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 ATCGANCTGGGGGCGCAAGGTTGGCCTTGGGCATNCTG-GCTAAAGGANAAATNCNNGGT 697 consensus_8878#0 TACGACATGCGGTTCGACGAGCTGGCAAGGCTGTACCGCAATCAGGGCTGCGATATGCTG 718 consensus_8878#3 TACGACATGCGGTTTGACGAGCTGGCCAGGCTGTACCGCAATCAGGGCTGCGATATGCTG 560 consensus_8878#1 GAGACCTCTTGTGGCATCATTGGCNTAACACGAACNATTGGCCGGTATCGCAA------- 762 consensus_8878#4 ------------------------------------------------------------ consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 TTGACGAAGCGCTGGGCCNAGGCGNTACCGGACACTAGGCTGCGAAAATNCNGNTCAC-- 755 consensus_8878#0 ATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGG 778 consensus_8878#3 ATCTACCCGGGCGCGTTCAACATGAAGACGGGCCCGCTGCACTGGGAGCTGTTGGCGCGG 620 consensus_8878#1 ------------------------------------------------------------ consensus_8878#4 ------------------------------------------------------------ consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 ------------------------------------------------------------ consensus_8878#0 GGCCGTGCAAACGATACGCAATCATACGTGGCGACCATTTCGCCGGCACGCGACCCAGCG 838 consensus_8878#3 GGCCGTGCGAACGATACGCAATCGTACGTGGCGACCATTTCGCCGGCACGCGACCCAGCC 680 consensus_8878#1 ------------------------------------------------------------ consensus_8878#4 ------------------------------------------------------------ consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 ------------------------------------------------------------ consensus_8878#0 GCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCGTCGCC 898 consensus_8878#3 GCCGGGTACGTTGCCTGGGGCCATTCGATGGTGGTCGACCCGTGGGCCAAGGTCATC--- 737 consensus_8878#1 ------------------------------------------------------------ consensus_8878#4 ------------------------------------------------------------ consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 ------------------------------------------------------------ consensus_8878#0 GAGGCGAACGAGGAGGAAGCGACCGTTGTCGCCGATGTGAATCTCCAGACGGTGGATGAA 958 consensus_8878#3 ------------------------------------------------------------ consensus_8878#1 ------------------------------------------------------------ consensus_8878#4 ------------------------------------------------------------ consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 ------------------------------------------------------------ consensus_8878#0 GTACGGGCACAGATTCCAATATTTAGCCAGCGGCGCACTGACCTGTACGCGACGAACGCA 1018 consensus_8878#3 ------------------------------------------------------------ consensus_8878#1 ------------------------------------------------------------ consensus_8878#4 ------------------------------------------------------------ consensus_8878#5 ------------------------------------------------------------ consensus_8878#2 ------------------------------------------------------------ consensus_8878#0 CTGGAGAAGTAGGCCGTGAATGCCATTTTTAAAAAAAAAACGTGTTGAAAATATACAGAC 1078 consensus_8878#3 ------------------------------------------------------------ consensus_8878#1 -- consensus_8878#4 -- consensus_8878#5 -- consensus_8878#2 -- consensus_8878#0 AT 1080 consensus_8878#3 -- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||