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Anopheles gambiae
cluster # 8884 cluster # 8884       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8884#0 length = 1182 sequences # 9  
consensus_8884#1 length = 1145 sequences # 3  

consensusID : consensus_8884#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1182
fasta sequence
                              [CCG-CCGCAGCGCATTGGATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCCAAAACGCGCCGCAAAACGAAAGGCGGCACCACCG-GGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAGCGGAGCAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTGACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGATAACGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCGAGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTCTACTGCATCCAGAATCCCTTTTTCCATCTTTTTGAATGCCTTGTCCCAGCCCCAGCTTCCCCGGCAAGCTGAATGGAAATAGCG-AAACACACACACACCCCCCGGCAGGACAAAAAAATGGCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGATAAATTTTTGGACCAATTTCAGTTTTGTTTCGCGCTGGAAAACAAACACGTTAAAGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAAATTGTGAAATTGCTACACCAATGCACACACGCAGAGACGACATTAAATT]

[+] EMBL BM653927             [CCG CCGCAGCGCATTGGATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCTAAAACGCGCCGCAAAACGAAAGGCGGCACCACCG GGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAGCGGAGCAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTACTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTGACATACAGGACAACCACGAGGAGGCGACGGGTGGCGCGTTTCTCATCTGTGATCTGATAACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM608125             [CCGCCCGCAGCGCATTGGATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGCCGCAGACCAGCAGCCAAAACGCGCCGCAAAACGAAAGGCGGCACCACCG GGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAGCGGAGCAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGACCGAACGTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTGACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08LBW             [              TTGGATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCCAAAACGCGCCGCAAAACGAAAGGCGGCACCACCGCGGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAGCGGA CAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGCACGGGCGACAAGGTGAAGCTTCCCGGCAC GCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCACATACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGTCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09F3G             [               TGGATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCCAAAACGCGCCGCAAAACGAAAGGCGGCACCACCG GGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAGCGGA CAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGCACGGGCGACAAGGTGAAGCTTCCCGGCAC GCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCACATACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGTCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTGACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGATAACGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCGAGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTCTACTGCATCCAGAATCCCTTTTTCCATCTTTTTGAATGCCTTGTCCCAGCCCCAGCTTCCCCGGCAAGCTGAATGGAAATAGCG AAACACACACACACACCACGGCAGGACAAAAAAATGGCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGAAAAAATTTTGGACCAATTTCAGTTTTGTTTCGCGCTGGAAAACAAACA                                                                                                                                              ]
[+] EMBL CNS093WS             [                 GATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCCAAAACGCGCCGCAAAACGAAAGGCGGCACCACCG GGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAGCGGAGCAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGCACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCA CACATACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGC ATAGGCGAATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX611471             [                                                                                                                                                                      CGAGAACAGAACGCAGCGGAGCAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGACCGAACGTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09F3H             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCTTTTTTAATGCCTTGTCCCAGCCCCAGCTTCCCCGGCAAGCTGAATGGAAATAGCG AGAAAAACACACACCCCCCGGCAGGACAAAAAAATGGCAAAATGATGCATGCTAGTGACAATTATTTTTTTTTGATAAATTTTTGGACCAATTTCAGTTTTGTTTCGCGCTGGAAAAAAAACACGTTAAAGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTTTTTATTTAAACTAATTTGCATTATCATTTGCAAAAATTGTGAAATTGCTACCCCAATGCACACACGCAGAGA            ]
[-] EMBL CNS093WT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCTGAATGGAAATAGCGCAAACACACACACACCCCCCGGCAGGACAAAAAAATGGCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGATAAATTTTTGGACCAATTTCAGTTTTGTTTCGCGCTGGAAAACAAACACGTTAAAGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAAATTGTGAAATTGCTACACCAATGCACACACGCAGAGACGACATTAAATT]
[-] EMBL CNS08LBX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   agttttgGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAAATTGTGAAATTGCTACACCAATGCACA                      ]


>consensus_8884#0 CCGCCGCAGCGCATTGGATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTAT TTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCCAAAACGCGCCGC AAAACGAAAGGCGGCACCACCGGGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAG CGGAGCAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCC AAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGA TGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCG ACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCA CGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACG GCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGC TCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGA TAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTG ACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGATAA CGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCG AGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTCTACTGCA TCCAGAATCCCTTTTTCCATCTTTTTGAATGCCTTGTCCCAGCCCCAGCTTCCCCGGCAA GCTGAATGGAAATAGCGAAACACACACACACCCCCCGGCAGGACAAAAAAATGGCAAAAT GATGCATGCTAGTGACAATTATTTTATTTTGATAAATTTTTGGACCAATTTCAGTTTTGT TTCGCGCTGGAAAACAAACACGTTAAAGGAATTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAAATTGTGA AATTGCTACACCAATGCACACACGCAGAGACGACATTAAATT



consensusID : consensus_8884#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1145
fasta sequence
                              [CCGCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCTAAAACGCGCCGCAAAACGAAAGGCGGCACCACCAGGGGGAAAAAACGGGAGCAAAACGAGAACAGAACGCAGTAAACAACAAAACCGGTCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTGACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGATAACGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCGAGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTCTACTGCATCCAGAATCCCTTTTTCCCTCTTTTTGAATGGCTTGTCCCAGCCCCAGCTCCCCCGGCAAGCTGAATGGAAATAGCGAAACACACACACACACACACACCACGGCAGGACAAAAAAAATGGCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGATAAATTTTTGGACCAATTTCAGTTTTGTTTCGCGCTGGAAAACAAACACGTTAAAGGAATTGTGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAAATTGTAAAATTGCTATACCAATGCACACACGCAGAGACGACATTAAAGTTGAACAGCACACAGGGTAAAAAAAA]

[+] EMBL BM583897             [CCGCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCTAAAACGCGCCGCAAAACGAAAGGCGGCACCACCAGGGGGAAAAAACGGGAGCAAAACGAGAACAGAACGCAGTAAACAACAAAACCGGTCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX617093             [                                                                             TAAAACGCGCCGCAAAACGAAAGGCGGCACCACCAGGGGGAAAAAACGGGAGCAAAACGAGAACAGAACGCAGTAAACAACAAAACCGGTCGGAACAACAACGGTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTGACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGATAACGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCGAGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTCTACTGCATCCAGAATCCC                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL AGA280581            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCGAGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTTTACTGCATCCAGAATCCCTTTTTCCCTCTTTTTGAATGGCTTGTCCCAGCCCCAGCTCCCCCGGCAAGCTGAATGGAAATAGCGAAACACACACACACACACACACCACGGCAGGACAAAAAAAATGGCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGATAAATTTTTGGACCAATTTCAGTTTTGTTTCGCGCTGGAAAACAAACACGTTAAAGGAATTGTGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAAATTGTAAAATTGCTATACCAATGCACACACGCAGAGACGACATTAAAGTTGAACAGCACACAGGGTAAAAAAAA]


>consensus_8884#1 CCGCACAAGTCCTACGATTTTAGCGTTTATTTACTTATTCTTTTCATTGTAGGATAGAGC AGTCGCCGACCAGCAGCTAAAACGCGCCGCAAAACGAAAGGCGGCACCACCAGGGGGAAA AAACGGGAGCAAAACGAGAACAGAACGCAGTAAACAACAAAACCGGTCGGAACAACAACG GTGCCGGAAACGATGAGCCAAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCG TCCAACATGAACCGATCGATGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTA CGGTCGTTCGGTACGGGCGACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAAC GTGTACGAGTTCGGCACCACGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAG CAATACTACACACAGAACGGCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCC TGCCCGGAAAAGTTTCAGCTCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAG CGAGTTTACGATCAGGTGATAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCG GTGCACGTGATCAACATTGACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTT CTCATCTGTGATCTGATAACGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGAC GAGCTGCTGCACGATTTCGAGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTC TACTAGAGCTTCTACTGCATCCAGAATCCCTTTTTCCCTCTTTTTGAATGGCTTGTCCCA GCCCCAGCTCCCCCGGCAAGCTGAATGGAAATAGCGAAACACACACACACACACACACCA CGGCAGGACAAAAAAAATGGCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGATA AATTTTTGGACCAATTTCAGTTTTGTTTCGCGCTGGAAAACAAACACGTTAAAGGAATTG TGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAAATTGTAAAA TTGCTATACCAATGCACACACGCAGAGACGACATTAAAGTTGAACAGCACACAGGGTAAA AAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8884#0      CCGCCGCAGCGCATTGGATACGAAAACATTGGCCACAAGTCCTACGATTTTAGCGTTTAT 60
consensus_8884#1      ------------------------------CCGCACAAGTCCTACGATTTTAGCGTTTAT 30
                                                       ***************************

consensus_8884#0      TTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCCAAAACGCGCCGC 120
consensus_8884#1      TTACTTATTCTTTTCATTGTAGGATAGAGCAGTCGCCGACCAGCAGCTAAAACGCGCCGC 90
                      *********************************************** ************

consensus_8884#0      AAAACGAAAGGCGGCACCACCGGGGGAAAAACACGGGAGCAAAACGAGAACAGAACGCAG 180
consensus_8884#1      AAAACGAAAGGCGGCACCACCAGGGGGAAAAAACGGGAGCAAAACGAGAACAGAACGCAG 150
                      ********************* **** **** ****************************

consensus_8884#0      CGGAGCAACAGTAAACAACAAAACCGGCCGGAACAACAACGGTGCCGGAAACGATGAGCC 240
consensus_8884#1      -----------TAAACAACAAAACCGGTCGGAACAACAACGGTGCCGGAAACGATGAGCC 199
                                 **************** ********************************

consensus_8884#0      AAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGA 300
consensus_8884#1      AAGCGTACGTTAGCCCACTCTCCATAGCCGTGATCTGTTCGTCCAACATGAACCGATCGA 259
                      ************************************************************

consensus_8884#0      TGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCG 360
consensus_8884#1      TGGAGGCGCACGGGTTTCTGGCGAAAAAGCGATTCAAGGTACGGTCGTTCGGTACGGGCG 319
                      ************************************************************

consensus_8884#0      ACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCA 420
consensus_8884#1      ACAAGGTGAAGCTTCCCGGCACGGCAGCGGACCGGCCGAACGTGTACGAGTTCGGCACCA 379
                      ************************************************************

consensus_8884#0      CGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACG 480
consensus_8884#1      CGTACGACGACATCTACAACGATTTGGCCGCGAAAGACAAGCAATACTACACACAGAACG 439
                      ************************************************************

consensus_8884#0      GCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGC 540
consensus_8884#1      GCCTGCTACACATGCTCGATCGCAATAGGCGAATAAAATCCTGCCCGGAAAAGTTTCAGC 499
                      ************************************************************

consensus_8884#0      TCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGA 600
consensus_8884#1      TCTGCACGGAGCGGTTCGATGTGCTGGTCACGTGCGAGGAGCGAGTTTACGATCAGGTGA 559
                      ************************************************************

consensus_8884#0      TAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTG 660
consensus_8884#1      TAGAATTTATGGAATCGAAAACTCCCAGCTACAACCTGCCGGTGCACGTGATCAACATTG 619
                      ************************************************************

consensus_8884#0      ACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGATAA 720
consensus_8884#1      ACATACAGGACAACCACGAGGAGGCGACGGTTGGCGCGTTTCTCATCTGTGATCTGATAA 679
                      ************************************************************

consensus_8884#0      CGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCG 780
consensus_8884#1      CGATGATGGCTCAAAGCGAAGACCTGGACAACGATATCGACGAGCTGCTGCACGATTTCG 739
                      ************************************************************

consensus_8884#0      AGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTCTACTGCA 840
consensus_8884#1      AGAACAAATGCCAGCGCAGTGTACTGCACTGTGTACAGTTCTACTAGAGCTTCTACTGCA 799
                      ************************************************************

consensus_8884#0      TCCAGAATCCCTTTTTCCATCTTTTTGAATGCCTTGTCCCAGCCCCAGCTTCCCCGGCAA 900
consensus_8884#1      TCCAGAATCCCTTTTTCCCTCTTTTTGAATGGCTTGTCCCAGCCCCAGCTCCCCCGGCAA 859
                      ****************** ************ ****************** *********

consensus_8884#0      GCTGAATGGAAATAGCGAAACACACACACACCCCC------CGGCAGGACAAAAAAA-TG 953
consensus_8884#1      GCTGAATGGAAATAGCGAAACACACACACACACACACACCACGGCAGGACAAAAAAAATG 919
                      ******************************* * *      **************** **

consensus_8884#0      GCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGATAAATTTTTGGACCAATTTCA 1013
consensus_8884#1      GCAAAATGATGCATGCTAGTGACAATTATTTTATTTTGATAAATTTTTGGACCAATTTCA 979
                      ************************************************************

consensus_8884#0      GTTTTGTTTCGCGCTGGAAAACAAACACGTTAAAGGAATTGTGTGTGTGTGTGTGTGTGT 1073
consensus_8884#1      GTTTTGTTTCGCGCTGGAAAACAAACACGTTAAAGGAATTGTGTGTGTGTG--------- 1030
                      ***************************************************         

consensus_8884#0      GTGTGTGTGTGTGTGTGTGCGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAA 1133
consensus_8884#1      -------------------CGTGTTTTTGTTTAAACTAATTTGCATTATCATTTGCAAAA 1071
                                         *****************************************

consensus_8884#0      ATTGTGAAATTGCTACACCAATGCACACACGCAGAGACGACATTAAATT----------- 1182
consensus_8884#1      ATTGTAAAATTGCTATACCAATGCACACACGCAGAGACGACATTAAAGTTGAACAGCACA 1131
                      ***** ********* ******************************* *           

consensus_8884#0      --------------
consensus_8884#1      CAGGGTAAAAAAAA 1145
                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)