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Anopheles gambiae
cluster # 8887 cluster # 8887       Sequences # 12       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8887#0 length = 1504 sequences # 7  
consensus_8887#1 length = 799 sequences # 1  
 consensus_8887#2 length = 703 sequences # 3  
consensus_8887#3 length = 562 sequences # 1  
consensusID : consensus_8887#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1504
fasta sequence 
                              [CCGCCCACGCGTCCGGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGCGTACAATGGGTCGTTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTTCGTCGAGCTGGTGCGCATGAACGGCACGACCGAGAGTATCAAATCGTCCACCCTTCCGATAACCGTGATCCGCCCGGAGCGCGTCATTGACCATGTGTTTACCGGATCGGTCATACTGCTCATCTCCATCCTGTACATTAACTTTGGCGCTGCGCTGGACGTTGGAGCGCTGAAGCAGATCGCACGGCGTCCGATTGGACCGATGATCGGGTTCGTGTGCCAGTTCGTGTTCATGCCCCTGCTCAGTTACGGTCTCGGGCATTTGCTGTTTCCGGACAACTACGAGCTGCAGCTGGGACTGTTCTTTACCGGCGTCTCGCCGGCCGGTGGAGCTTCCAACATCTGGACTGTGGCGCTGGGCGGTAATCTAACGCTCTCCATCGCCATGACCACTATCAGCACGATCGCCGCGTTCGGCATGATGCCGCTGTGGATTTTTACCCTCGGGCGTACTATCTTCCAGCGGGCAAACCTCGTCGTGCCCTACAGCCGCATTGCGTACACGGCCGTTGGATTGGTGGTCCCGATCAGTGCCGGTCTGCTCATACAACGGTACTGTCCCCGGTTCAGCCGGCTGCTGGTGCGCATCCTGAAGCCCATGTCCGTGATATTGATCCTGTTCATCGTCATCTTCGCGATCGTAACCAACCTGTACCTGTTTGAGCTGTTTTCCTGGCAAATCATCATCGCCGGGTTGGGTCTCCCTTTGCTCGGCTACTGTTTCGGGTTTTTGGCGAGCACACTGATGCGACTGCCGCTTGCCGACTCGCTGGCCATATCGGTCGAAACGGGCATACAGAACACCGGTATTGCGATCTTTCTGCTACGCTTTGCCCTGGAACAGCCGGCGGCGGATCTAACGACGGGTATGCCCGTTTCGAATGCGATTATGACACCGNTACCTCTGCTTCTGCTCCTGGTCGGGCTACGCATTCATGAACGCACGAAGCGACGCGCTGAAAAC]

[+] EMBL BM652936             [CCGCCCACGCGTCCGGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGCGTACAATGGGTCGTTTACCGTCGTTGCCAACTTTCTCGGGCAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM605594             [                      ccgGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGGCATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCAGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGCGTACAATGGGTCGTTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTTCGTCGAGCTGGTGCGCATGAACGGCACGACCGAGAGTATCAAATCGTCCACCCTTCCGATAACCGTGATCCGCCCGGAGCGCGTCATTGACCATGTGTTTACCGGATCGGTCATACTGCTCATCTCCATCCTGTACATTAACTTTGGCGCTGCGCTGGACGTTGGAGCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX607894             [                                                                             CTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATCAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGATCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGCGTACAATGGGTCGTTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTTCGTCGAGCTGGTGCGCATGAACGGCACGACCGAGAGTATCAAATCGTCCACCCTTCCGATAACCGTGATCCGCCCGGAGCGCGTCATTGACCATGTGTTTACCGGATCGGTCATACTGCTCATCTCCATCCTGTACATTAACTTTGGCGCTGCGCTGGATGTTGGAGCGTTGAAGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX612751             [                                                                                                                                                                                                                                                                                                GGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAATGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGCGTACAATGGGTCGTTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTTCGTCGAGCTGGTGCGCATGAACGGCACGACCGAGAGTATCAAATCGTCCACCCTTCCGATAACCGTGATCCGCCCGGAGCGCGTCATTGACCATGTGTTTACCGGATCGGTCATACTGCTCATCTCCATCCTGTACATTAACTTTGGCGCTGCGCTGGACGTTGGAGCGCTGAAGCAGATCGCACGGCGTCCGATTGGACCGATGATCGGGTTCGTGTGCCAGTTCGTGTTCATGCCCCTGCTCAGTTACGGTCTCGGGCATTTGCTGTTTCCGGACAACTACGAGCTGCAGCTGGGACTGTTCTTTACCGGCGTCTCGCCGGCCGGTGGAGCTTCCAACATCTGGACTGTGGCGCTGGGCGGTAATCTAACGCTCTCCATCGCCATGACCACTATCAGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM575096             [                                                                                                                                                                                                                                                                                                                                              ccgACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGCGTACAATGGGTCGTTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTTCGTCGAGCTGGTGCGCATGAACGGCACGACCGAGAGTATCAAATCGTCCACCCTTCCGATAACCGTGATCCGCCCAGAGCGCGTCATTGACCATGTGTTTACCGGATCGGTCATACTGCTCATCTCCATCCTGTACATTAACTTTGGCGCTGCGCTGGACGTTGGAGCGCTGAAGCAGATCGCACGGCGTCCGATTGGACCGATGATCGGGTTCGTGTGCCAGTTCGTGTTCATGCCCCTGCTCAGTTACGGTCTCGGGCATTTGCTGTTTCCGGACAACTACGAGCTGCAGCTGGGACTGTTCTTTACCGGCGTCTCGCCGGCCGGTGGAGCTTCCAACATCTGGACTGTGGCGCTTGGCGGCAATCTAACGCTCTCCATCGCCATGACCACTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX620012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGATTGGACCGATGATCGGGTTCGTGTGCCAGTTCGTGTTCATGCCCCTGCTCAGTTACGGTCTCGGGCATTTGCTGTTTCCGGACAACTACGAGCTGCAGCTGGGACTGTTCTTTACCGGCGTCTCGCCGGCCGGTGGAGCTTCCAACATCTGGACTGTGGCGCTGGGCGGCAATCTAACGCTCTCCATCGCCATGACCACTATCAGCACGATCGCCGCGTTCGGCATGATGCCGCTGTGGATTTTTACCCTCGGGCGTACTATCTTCCAGCGGGCAAACCTCGTCGTGCCCTACAGCCGCATTGCGTACACGGCCGTTGGATTGGTGGTCCCGATCAGTGCCGGTCTGCTCATACAACGGTACTGTCCCCGGTTCAGCCGGCTGCTGGTGCGCATCCTGAAGCCCATGTCCGTGATATTGATCCTGTTCATCGTCATCTTCGCGATCGTAACCAACCTGTACCTGTTTGAGCTGTTTTCCTGGCAAATCATCATCGCCGGGTTGGGTCTCCCTTTGCTCGGCTACTGTTTCGGGTTTTTGGCGAGCACACTGATGCGACTGCCGCTTGCCGACTCGCTGGCCATATCGGTCGAAACGGGCATACAGAACACCGGTATTGCGATCTTTCTGCTACGCTTTGCCCTGGAACAGCCGGCGGCGGATCTAACGACGGGTATGCCCGTTTCGAATGCGATTATGACACCGNTACCTCTGCTTCTGCTCCTGGTCGGGCTACGCATTCATGAACGCACGAAGCGACGCGCTGAAAAC]
[+] EMBL BX615880             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGCTGGGCGGTAATCTAACGCTCGCCATCGCCATGACCACTATCAGCACGATCGCCGCGTTCGGCATGATGCCGCTGTGGATTTTTACCCTCGGGCGTACGATCTTCCAGCGGGCAAACCGCGTCGGGCCCTACAGCCGCTTTGCGTACACGGCCGTCGGATTGGTGGTCCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_8887#0
CCGCCCACGCGTCCGGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCA
TGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTA
TCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCT
GCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGC
AAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGT
TACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACG
AATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGA
GCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGC
CATCGCGTACAATGGGTCGTTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTT
CGTCGAGCTGGTGCGCATGAACGGCACGACCGAGAGTATCAAATCGTCCACCCTTCCGAT
AACCGTGATCCGCCCGGAGCGCGTCATTGACCATGTGTTTACCGGATCGGTCATACTGCT
CATCTCCATCCTGTACATTAACTTTGGCGCTGCGCTGGACGTTGGAGCGCTGAAGCAGAT
CGCACGGCGTCCGATTGGACCGATGATCGGGTTCGTGTGCCAGTTCGTGTTCATGCCCCT
GCTCAGTTACGGTCTCGGGCATTTGCTGTTTCCGGACAACTACGAGCTGCAGCTGGGACT
GTTCTTTACCGGCGTCTCGCCGGCCGGTGGAGCTTCCAACATCTGGACTGTGGCGCTGGG
CGGTAATCTAACGCTCTCCATCGCCATGACCACTATCAGCACGATCGCCGCGTTCGGCAT
GATGCCGCTGTGGATTTTTACCCTCGGGCGTACTATCTTCCAGCGGGCAAACCTCGTCGT
GCCCTACAGCCGCATTGCGTACACGGCCGTTGGATTGGTGGTCCCGATCAGTGCCGGTCT
GCTCATACAACGGTACTGTCCCCGGTTCAGCCGGCTGCTGGTGCGCATCCTGAAGCCCAT
GTCCGTGATATTGATCCTGTTCATCGTCATCTTCGCGATCGTAACCAACCTGTACCTGTT
TGAGCTGTTTTCCTGGCAAATCATCATCGCCGGGTTGGGTCTCCCTTTGCTCGGCTACTG
TTTCGGGTTTTTGGCGAGCACACTGATGCGACTGCCGCTTGCCGACTCGCTGGCCATATC
GGTCGAAACGGGCATACAGAACACCGGTATTGCGATCTTTCTGCTACGCTTTGCCCTGGA
ACAGCCGGCGGCGGATCTAACGACGGGTATGCCCGTTTCGAATGCGATTATGACACCGNT
ACCTCTGCTTCTGCTCCTGGTCGGGCTACGCATTCATGAACGCACGAAGCGACGCGCTGA
AAAC

consensusID : consensus_8887#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 799
fasta sequence 
                              [GGCCAAGAATCGGCACGATGGAGCAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAATCGGTGCTTAGTAACGTGGTAAAACTAACGTATCACACACCTCCGAACGCAATTCCATACGAGTACAATGGCCTGTCCACATAGTATAAGCTGCGTGCGTATTCACTGCCCTACTGATACGTTCAACTGATAGCGGACCTGCAAAGCCACTTTCAGTCAGCAAATTGACTGATAGAGCAACGGGATAACTGCCATCCGCCAGGTGTCCAGCGTGGGCTCGGGAAGTTACCTATGATCCTGCCTAAGCTCAAGCTATGGGCATGAGCGACCACGCGAAGACGTAACGCTACGAATATGAGCGCATAGCGAAGGCAGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGTCGTACAATGGGTCGTCTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTCGTCGAGCTGGTGCGCATGAACGGCAACGACCGAGAAGTATCGAAGATCTGGTCCACCCTTNCTCGATAAACCCGTGGATTCCCGGCCCGGAGGCAGCGGTCCAATTGAACCCAATGTGTTTAACCCGGNATCCGGGTNAATACTAGGTCAAATCTTCCAAGTNCCGTGTCACATTTACACCTTTTGGTCGCTTCGTACTGTGGACACGTTTGGAGGCGCCTGAAAAGAA]

[+] EMBL BX469826             [GGCCAAGAATCGGCACGATGGAGCAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAATCGGTGCTTAGTAACGTGGTAAAACTAACGTATCACACACCTCCGAACGCAATTCCATACGAGTACAATGGCCTGTCCACATAGTATAAGCTGCGTGCGTATTCACTGCCCTACTGATACGTTCAACTGATAGCGGACCTGCAAAGCCACTTTCAGTCAGCAAATTGACTGATAGAGCAACGGGATAACTGCCATCCGCCAGGTGTCCAGCGTGGGCTCGGGAAGTTACCTATGATCCTGCCTAAGCTCAAGCTATGGGCATGAGCGACCACGCGAAGACGTAACGCTACGAATATGAGCGCATAGCGAAGGCAGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCGTCATTGAACCACTCGTCGCGGCCATCGTCGTACAATGGGTCGTCTTACCGTCGTTGCCAACTTTCTCGGCCAGACCAGCTTTTCGTCGAGCTGGTGCGCATGAACGGCAACGACCGAGAAGTATCGAAGATCTGGTCCACCCTTNCTCGATAAACCCGTGGATTCCCGGCCCGGAGGCAGCGGTCCAATTGAACCCAATGTGTTTAACCCGGNATCCGGGTNAATACTAGGTCAAATCTTCCAAGTNCCGTGTCACATTTACACCTTTTGGTCGCTTCGTACTGTGGACACGTTTGGAGGCGCCTGAAAAGAA]




>consensus_8887#1
GGCCAAGAATCGGCACGATGGAGCAACTAAAGTGAACGTGAACGTGCAATGTTCCATACA
ATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAATCGGTGCTTAGTAACGTGGTAAAA
CTAACGTATCACACACCTCCGAACGCAATTCCATACGAGTACAATGGCCTGTCCACATAG
TATAAGCTGCGTGCGTATTCACTGCCCTACTGATACGTTCAACTGATAGCGGACCTGCAA
AGCCACTTTCAGTCAGCAAATTGACTGATAGAGCAACGGGATAACTGCCATCCGCCAGGT
GTCCAGCGTGGGCTCGGGAAGTTACCTATGATCCTGCCTAAGCTCAAGCTATGGGCATGA
GCGACCACGCGAAGACGTAACGCTACGAATATGAGCGCATAGCGAAGGCAGATTTGGAAG
ACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTA
CGATCGTCATTGAACCACTCGTCGCGGCCATCGTCGTACAATGGGTCGTCTTACCGTCGT
TGCCAACTTTCTCGGCCAGACCAGCTTTTCGTCGAGCTGGTGCGCATGAACGGCAACGAC
CGAGAAGTATCGAAGATCTGGTCCACCCTTNCTCGATAAACCCGTGGATTCCCGGCCCGG
AGGCAGCGGTCCAATTGAACCCAATGTGTTTAACCCGGNATCCGGGTNAATACTAGGTCA
AATCTTCCAAGTNCCGTGTCACATTTACACCTTTTGGTCGCTTCGTACTGTGGACACGTT
TGGAGGCGCCTGAAAAGAA

consensusID : consensus_8887#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 703
fasta sequence 
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGTTTGGTGCATGCCGCTCTACGCGTAGAGCGCAGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACCACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTAGCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTTCCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCG]

[+] EMBL BM581734             [CCGCCCACGCGTCCGCCCACGCGTCCGGGTTTGGTGCATGCCGCCCTACGCGTAGAGCGCAGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACCACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTAGCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTTCCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTG                    ]
[+] EMBL BM607343             [                    ccggtttGGTTTGGTGCATGCCGCTCTACGCGTAGAGCGCAGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACCACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTAGCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTTCCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCG]
[+] EMBL BM598032             [                                ccgGCATGCCGCTCTACGCGTAGAGCGCAGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACCACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTAGCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTTCCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACGCTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGG                        ]




>consensus_8887#2
CCGCCCACGCGTCCGCCCACGCGTCCGGGTTTGGTGCATGCCGCTCTACGCGTAGAGCGC
AGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACC
ACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTA
GCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTT
CCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAA
TCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTA
ACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAG
CTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTA
GCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGG
GAAGTTACCTATGATCCGCCTAAGCTCAACATGGACATGAGCACCACGCGAAACGTAACG
CTACGAATAGAGCGCATAGCGAAGGCGGATTTGGAAGACATCCGCTCGGTGCAGTTGAGA
AGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTACGATCG

consensusID : consensus_8887#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 562
fasta sequence 
                              [CCGCGGACGCGTGGGTGCCGCTCTACGCGTAGAGCGCAGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACCACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTAGCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTTCCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGGCATGAGCACC]

[+] EMBL BM625554             [CCGCGGACGCGTGGGTGCCGCTCTACGCGTAGAGCGCAGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACCACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTAGCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTTCCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATCTCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGCAATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACTGATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACGGGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAAGCTCAACATGGGCATGAGCACC]




>consensus_8887#3
CCGCGGACGCGTGGGTGCCGCTCTACGCGTAGAGCGCAGTTGCATCACAATATTCATTCC
GATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACCACAGTAAAACGCTGTTCAATTTC
TCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTAGCCCCTACTGTGACTACGAACAC
ATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTTCCAGCACTTTTCAGCAAAACGCA
AACTAAAGTGAACGTGAACGTGCAATGTTCCATACAATCTCATGAACCAGCGCAAATATC
TCCTGCTCCCAACGGTGCTTAGTAACGTGGAAAACTAACGTATCACACACCTCCGAACGC
AATTCCATCGAGTACAATGGCCTGTCCACTGTATAAGCTGCTGCTATTCACTGCCCTACT
GATACTTCAACTGATAGCGACCTGCAAAGCCACTTTAGCAGCAAATTACGATGAGCAACG
GGATAATGCCATCCGCCAGGTGTCCAGCGTGGGCTGGGAAGTTACCTATGATCCGCCTAA
GCTCAACATGGGCATGAGCACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8887#2      CCGCCCACGCGTCCGCCCACGCGTCCGGGTTTGGTGCATGCCGCTCTACGCGTAGAGCGC 60
consensus_8887#3      -----------------------CCGCGGACGCGTGGGTGCCGCTCTACGCGTAGAGCGC 37
consensus_8887#0      ------------------------------------------------------------
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      AGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACC 120
consensus_8887#3      AGTTGCATCACAATATTCATTCCGATCGCTGTTGTGATTGAAAGTTGCACACAGTGCACC 97
consensus_8887#0      ------------------------------------------------------------
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTA 180
consensus_8887#3      ACAGTAAAACGCTGTTCAATTTCTCATCGTGGGAGCCGCTGCTAGTGTGCACGTTTTTTA 157
consensus_8887#0      ------------------------------------------------------------
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      GCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTT 240
consensus_8887#3      GCCCCTACTGTGACTACGAACACATTCCGAAAGGGGTATCCACGCAGTTGTTTTGTTTTT 217
consensus_8887#0      ------------------------------------------------------------
consensus_8887#1      ----------------------------------------------------------GG 2
                                                                                  

consensus_8887#2      CCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAA 300
consensus_8887#3      CCAGCACTTTTCAGCAAAACGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAA 277
consensus_8887#0      ----CCGCCCACG-CGTCCGGCAAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAA 55
consensus_8887#1      CCAAGAATCGGCA-CGATGGAGCAACTAAAGTGAACGTGAACGTGCAATGTTCCATACAA 61
                                 *  *        *************************************

consensus_8887#2      TCTCATGAACCAGCGCAAATATCTCCTGCTCCCAA-CGGTGCTTAGTAACGTGG-AAAAC 358
consensus_8887#3      TCTCATGAACCAGCGCAAATATCTCCTGCTCCCAA-CGGTGCTTAGTAACGTGG-AAAAC 335
consensus_8887#0      TCTCATGAACCAGCGCAAATATCTCCTGCTCCCAA-CGGTGCTTAGTAACGTGG-AAAAC 113
consensus_8887#1      TCTCATGAACCAGCGCAAATATCTCCTGCTCCCAATCGGTGCTTAGTAACGTGGTAAAAC 121
                      *********************************** ****************** *****

consensus_8887#2      TAACGTATCACACACCTCCGAACGCAATTCCAT-CGAGTACAATGGCCTGTCCACT--GT 415
consensus_8887#3      TAACGTATCACACACCTCCGAACGCAATTCCAT-CGAGTACAATGGCCTGTCCACT--GT 392
consensus_8887#0      TAACGTATCACACACCTCCGAACGCAATTCCAT-CGAGTACAATGGCCTGTCCACT--GT 170
consensus_8887#1      TAACGTATCACACACCTCCGAACGCAATTCCATACGAGTACAATGGCCTGTCCACATAGT 181
                      ********************************* *********************   **

consensus_8887#2      ATAAGCTGC-TGC-TATTCACTGCCCTACTGATAC-TTCAACTGATAGCG-ACCTGCAAA 471
consensus_8887#3      ATAAGCTGC-TGC-TATTCACTGCCCTACTGATAC-TTCAACTGATAGCG-ACCTGCAAA 448
consensus_8887#0      ATAAGCTGC-TGC-TATTCACTGCCCTACTGATAC-TTCAACTGATAGCG-ACCTGCAAA 226
consensus_8887#1      ATAAGCTGCGTGCGTATTCACTGCCCTACTGATACGTTCAACTGATAGCGGACCTGCAAA 241
                      ********* *** ********************* ************** *********

consensus_8887#2      GCCACTTTAG--CAGCAAATTA--CGAT-GAGCAACGGGATAA-TGCCATCCGCCAGGTG 525
consensus_8887#3      GCCACTTTAG--CAGCAAATTA--CGAT-GAGCAACGGGATAA-TGCCATCCGCCAGGTG 502
consensus_8887#0      GCCACTTTAG--CAGCAAATTA--CGAT-GAGCAACGGGATAA-TGCCATCCGCCAGGTG 280
consensus_8887#1      GCCACTTTCAGTCAGCAAATTGACTGATAGAGCAACGGGATAACTGCCATCCGCCAGGTG 301
                      ********    *********    *** ************** ****************

consensus_8887#2      TCCAGCGTGGGCT-GGGAAGTTACCTATGATCC-GCCTAAGCTCAA--CATGGACATGAG 581
consensus_8887#3      TCCAGCGTGGGCT-GGGAAGTTACCTATGATCC-GCCTAAGCTCAA--CATGGGCATGAG 558
consensus_8887#0      TCCAGCGTGGGCT-GGGAAGTTACCTATGATCC-GCCTAAGCTCAA--CATGGACATGAG 336
consensus_8887#1      TCCAGCGTGGGCTCGGGAAGTTACCTATGATCCTGCCTAAGCTCAAGCTATGGGCATGAG 361
                      ************* ******************* ************   **** ******

consensus_8887#2      C-ACCACGCGAA-ACGTAACGCTACGAATA-GAGCGCATAGCGAAGGCGGATTTGGAAGA 638
consensus_8887#3      C-ACC------------------------------------------------------- 562
consensus_8887#0      C-ACCACGCGAA-ACGTAACGCTACGAATA-GAGCGCATAGCGAAGGCGGATTTGGAAGA 393
consensus_8887#1      CGACCACGCGAAGACGTAACGCTACGAATATGAGCGCATAGCGAAGGCAGATTTGGAAGA 421
                      * ***                                                       

consensus_8887#2      CATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTAC 698
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      CATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTAC 453
consensus_8887#1      CATCCGCTCGGTGCAGTTGAGAAGCGAGCGTGAGCACGTGGCTTGGGTCGAGAACGGTAC 481
                                                                                  

consensus_8887#2      GATCG------------------------------------------------------- 703
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      GATCGTCATTGAACCACTCGTCGCGGCCATCG-CGTACAATGGGTCGT-TTACCGTCGTT 511
consensus_8887#1      GATCGTCATTGAACCACTCGTCGCGGCCATCGTCGTACAATGGGTCGTCTTACCGTCGTT 541
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      GCCAACTTTCTCGGCCAGACCAGCTTTTTCGTCGAGCTGGTGCGCATGAACGGCA-CGAC 570
consensus_8887#1      GCCAACTTTCTCGGCCAGACCAGCTTTT-CGTCGAGCTGGTGCGCATGAACGGCAACGAC 600
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      CGAGA-GTATCAAATCGTCCACCCTTCCGATAACCGTGATCCGCCCGGAGCGCGTCATTG 629
consensus_8887#1      CGAGAAGTATCGAAG-ATCTGGTCCACCCTTNCTCG--ATAAACCCGTGG---ATTCCCG 654
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      ACCATGTGTTTACCGGATCGGTCATACTGCTCATCTCCATCCTGTACATTAACTTTGGCG 689
consensus_8887#1      GCC-CGGAGGCAGCGGTCCAATTGAACCCAATGTGTTTAACCCG-GNATCCGGGTNAATA 712
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      CTGCGCTGGACGTTG-GAGCGCTGAAGCAGATCGCACGGCGTCCGATTGGACCGATGATC 748
consensus_8887#1      CTAGGTCAAATCTTCCAAGTNCCGTGTCACATT-TACACCTTTTGGTCGCTTCGTACTGT 771
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      GGGTTCGTGTGCCAGTTCGTGTTCATGCCCCTGCTCAGTTACGGTCTCGGGCATTTGCTG 808
consensus_8887#1      GGACACGTTTGGAGGCGCCTGAAAAGAA-------------------------------- 799
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      TTTCCGGACAACTACGAGCTGCAGCTGGGACTGTTCTTTACCGGCGTCTCGCCGGCCGGT 868
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      GGAGCTTCCAACATCTGGACTGTGGCGCTGGGCGGTAATCTAACGCTCTCCATCGCCATG 928
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      ACCACTATCAGCACGATCGCCGCGTTCGGCATGATGCCGCTGTGGATTTTTACCCTCGGG 988
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      CGTACTATCTTCCAGCGGGCAAACCTCGTCGTGCCCTACAGCCGCATTGCGTACACGGCC 1048
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      GTTGGATTGGTGGTCCCGATCAGTGCCGGTCTGCTCATACAACGGTACTGTCCCCGGTTC 1108
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      AGCCGGCTGCTGGTGCGCATCCTGAAGCCCATGTCCGTGATATTGATCCTGTTCATCGTC 1168
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      ATCTTCGCGATCGTAACCAACCTGTACCTGTTTGAGCTGTTTTCCTGGCAAATCATCATC 1228
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      GCCGGGTTGGGTCTCCCTTTGCTCGGCTACTGTTTCGGGTTTTTGGCGAGCACACTGATG 1288
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      CGACTGCCGCTTGCCGACTCGCTGGCCATATCGGTCGAAACGGGCATACAGAACACCGGT 1348
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      ATTGCGATCTTTCTGCTACGCTTTGCCCTGGAACAGCCGGCGGCGGATCTAACGACGGGT 1408
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------------------------------
consensus_8887#3      ------------------------------------------------------------
consensus_8887#0      ATGCCCGTTTCGAATGCGATTATGACACCGNTACCTCTGCTTCTGCTCCTGGTCGGGCTA 1468
consensus_8887#1      ------------------------------------------------------------
                                                                                  

consensus_8887#2      ------------------------------------
consensus_8887#3      ------------------------------------
consensus_8887#0      CGCATTCATGAACGCACGAAGCGACGCGCTGAAAAC 1504
consensus_8887#1      ------------------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)