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Anopheles gambiae
cluster # 8898 cluster # 8898       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8898#0 length = 2150 sequences # 10  
consensus_8898#1 length = 1191 sequences # 2  

consensusID : consensus_8898#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2150
fasta sequence
                              [CCGCTGTTACACGGTCTTGGTTTCGGTGCGCCGGAATAAGCGACGTTCTCGCTGTGGCAATTTGTCTGCTGGAGGCTTTTTCGTTCTCTAACGAAGAGTTGTTAGAGTGGCTTATCTCGTCTGGCGCGCGCGCCACCAGCGTGTTGTGTCGCAGGCAAGTGCCGAACGACCGAAAGCAGTACAAGTGCCGTTCAACGCCACGGACAAAAGAGGGCAACGGGCAACTTGTGCTAGCTGATAACATACGACGACGACGACGACGACGGCCCGACCACGAATACACGCACACCTACAAAAAGATCGTGCTAATACGTGCGATATTTGACCGTAGTGAATTGCCCGGTGTGCGGAAATCTGTACAAGTGTCCTCTCGAAAAGAAAACG-AAAAAAGAGCGAGGCCATAGGGGCTACATCATCCGCCTGGTCGGTTATCTTTCGATGTGCCACGATCAGCGGTGGAACGTGTTCCAGTGGCAGCGCAGTGTGGCAGAGCAGCAGTTTTTCGTGCGGGTGGTTAGTTCACGCCGGCGATAGATAATACCGAGGGCACACATCGCTTCGATAACGACGAGAAGCTAGCACACAAAATGGATGTCGTCTACACGTCGGACAGCTGCGATAGCGATTCGCGCGAGCAGAAAACCGTCGATTTGGGCCACTCGAACAAGCGGCATCTCGATGACGATCTGTTGCGTGTCTCTAAATCGAAGAAGCTAGCGGAGGATATTGAAACGGTGCTGCTGAACCACAACAAGCTGATAAGGGTGCCGCTGTCCCTGAACGACTTTACCAATCTGAAGGTGCTGGATCTGAGCAACAATCGCCTCGAGGAGCTGCCGGAGGTGATCACGCAATGCCAGCTGACGACGCTGATCGTAAAGAACAACCTGTTGACGGATAAATCGCTGCCCAAATCATTGCTCGGCGCTGCCGGGCATGGTCTGAAGGAGCTCAATCTGAGCGGCAACCGTTTCGCGCACTTTCCCGAACAGGTGATCGAGCTGCGATCGCTCAAGTATCTCTACCTGGGCGGCAATCAGATCACCAACGTTTCGAAGGACATCTGGAAGCTGCAGAACCTACAGCTCCTGTCACTGGGTGGAAACCTCATTACCGAGATTCCGGAGACCGTCGGGCTGCTCAACCACCTGCACGCGCTCGTCCTCTGTGATAATCTGCTCGAGGCGCTTCCTGCGTCCATAGCCCGTTTGGTCAATCTGAAGTCGCTGTTGCTGCACAAAAATCGTCTAAGACATCTGCCACGGGAGATTATAACGTTGCGAAACCTAACTGAGTTGAGTTTGCGTGATAACCCATTGGTTGTGCGCTTCGTTAAGGATATGACCTTGAATCCACCAAGTTTGCTAGAGCTCGCCGGACGAACTGTGAAAACCTGTGCCATTCGCTACGCAGCGGAAGATCTACCTCGGACCTTGATCGAGTACCTTCAGACGGCCAACTGCTGTGTGAACCCCAATTGCAAAGGAGTATTTTTCGACAATCGTGTAGAGCATATCAAGTTTGTAGATTTCTGTGGCAAATACCGTATTCCTTTGTTGCAGTATTTATGCTCCTCAAAATGCGTTGCAGATACCAGCTCGTCGGATCCGGGCAGCGAGCCAAACAGTAGCATGATGCGTAAGGTGCTACTCGGTTAGTTGGAGGATGTGTTTCTTTGTTAATGGTACAAATTGTTAGAGCTTATCGCCAAAACGCGCCATAAAACGGGTTGACAGTCATAGTACAACATCCATCCTTGAAGCTGGCGTTTCACATCCCCACGCCAGAAAAGGACGGGTCCGATTGTTCCCCCCCCCCCCCTCCCCTATACCTAAAGTGCTACTCTAGTTCAACTGGCTACACTTTCTAGAAGAGAATATCAAAGCAAGGTTATGATTGTAAATTGCATGACAGAATGTGCACATTGCGATACAAAAGAGGTGGATGGATATCGTCAAACGTTAGAGTGTGTGTGTGGCAAGAAAGGACAGGATGGGTCACCGCAATAGTAGCAGCTGTAACAGCATTCTCTTATCGCAAAGCAGGCGACCGCGACACCTCTTGGAAGGATTATGTGATTTGCTCCAAGAGCAGCTAGATGGGAAGCACTAATATTTACAATATATACATCATATACACAAAACAAAAAA]

[+] EMBL BM594714             [CCGCTGTTACACGGTCTTGGTTTCGGTGCGCCGGAATAAGCGACGTTCTCGCTGTGGCAATTTGTCTGCTGGAGGCTTTTTCGTTCTCTAACGAAGAGTTGTTAGAGTGGCTTATCTCGTCTGGCGCGCGCGCCACCAGCGTGTTGTGTCGCAGGCAAGTGCCGAACGACCGAAAGCAGTACAAGTGCCGTTCAACGCCACGGACAAAAGAGGGCAACGGGCAACTTGTGCTAGCTGATAACATACGACGACGACGACGACGACGGCCCGACCACGAATACACGCACACCTACAAAAAGATCGTGCTAATACGTGCGATATTTGACCGTAGTGAATTGCCCGGTGTGCGGAAATCTGTACAAGTGTCCTCTCGAAAAGAATACG AAAAAAGAGCGAGGCCATAAGGGCTACATCATCCGCCTGGTCGGTTATCTTTCGATGTGCCACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM643883             [          cCGGTCGTGGTTTCGGTGCGCCGGAATAAGCGACGTTCGCGCTGTGGCAATTTGGCTGCTGGAGGCTTTTTCGTTCTCGAACGAAGAGTTGTTAGAGTGGCTTAGCTCGTCTGGCGCGCGCGCCACCAGCGTGTTGTGTCGCAGGCAAGTGCCGAACGACCAAAAGCAGTACAAGTGCCGTTCAACGCCACGGACAAAAGAGGGCAACGGGCAACTTGTGCTAGCTGATAACAGACGACGACGACGACGACGACGGCCCGACCACGAATACACGCACACCTACAAAAAGATCGTGCTAATACGTGCGAGATTTGACCGTAGTGAATTGTCCGGTGTGCGGAAATCTGTACAAGTGTCCTCTCGAAAAGAGAACGAAAAAAAGAGCGAGGCCATAGGGGCTACATCATCCGCCTGGTCGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX604943             [                                                                                                                                                                                                                                                                                                                                                                   TGTACAAGTGTCCTCTCGAAAAGAAAACG AAAAAAGAGCGAGGCCATAGGGGCTACATCATCCGCCTGGTCGGTTATCTTTCGATGTGCCACGATCAGCGGTGGAACGTGTTCCAGTGGCAGCGCAGTGTGGCAGAGCAGCAGTTTTTCGTGCGGGTGGTTAGTTCACGCCGGCGATAGATAATACCGAGGGCACACATCGCTTCGATAACGACGAGAAGCTAGCACACAAAATGGATGTCGTCTACACGTCGGACAGCTGCGATAGCGATTCGCGCGAGCAGAAAACCGTCGATTTGGGCCACTCGAACAAGCGGCATCTCGATGACGATCTGTTGCGTGTCTCTAAATCGAAGAAGCTAGCGGAGGATATTGAAACGGTGCTGCTGAACCACAACAAGCTGATAAGGGTGCCGCTGTCCCTGAACGACTTTACCAATCTGAAGGTGCTGGATCTGAGCAACAATCGCCTCGAGGAGCTGCCGGAGGTGATCACGCAATGCCAGCTGACGACGCTGATCGTAAAGAACAACCTGTTGACGGATAAATCGCTGCCCAAATCATTGCTCGGCGCTGCCGGGCATGGTCTGAAGGAGCTCAATCTGAGCGGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX605174             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGTTAGTTCACGCCGGCGATAGATAATACCGAGGGCACACATCGCTTCGATAACGACGAGAAGCTAGCACACAAAATGGATGTCGTCTACACGTCGGACAGCTGCGATAGCGATTCGCGCGAGCAGAAAACCGTCGATTTGGGCCACTCGAACAAGCGGCATCTCGATGACGATCTGTTGCGTGTCTCTAAATCGAAGAAGCTAGCGGAGGATATTGAAACGGTGCTGCTGAACCACAACAAGCTGATAAGGGTGCCGCTGTCCCTGAACGACTTTACCAATCTGAAGGTGCTGGATCTGAGCAACAATCGCCTCGAGGAGCTGCCGGAGGTGATCACGCAATGCCAGCTGACGACGCTGATCGTAAAGAACAACCTGTTGACGGATAAATCGCTGCCCAAATCATTGCTCGGCGCTGCCGGGCATGGTCTGAAGGAGCTCAATCTGAGCGGCAACCGTTTCGCGCACTTTCCCGAACAGGTGATCGAGCTGCGATCGCTCAAGTATCTCTACCTGGGCGGCAATCAGATCACCAACGTTTCGAAGGACATCTGGAAGCTGCAGAACCTACAGCTCCTGTCACTGGGTGGAAACCTCATTACCGAGATTCCGGAGACCGTCGGGCTGCTCAACCACCTGCACGCGCTCGTCCTCTGTGATAATCTGCTCGAGGCGCTTCCTGCGTCCATAGCCCGTTTGGTCAATCTGAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM630870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGGTTAGTTCACGCCGGCGATAGATAATACCGAGGGCACACATCGCTTCGATAACGACGAGAAGCTAGCACACAAAATGGATGTCGTCTACACGTCGGACAGCTGCGATAGCGATTCGCGCGAGCAGAAAACCGTCGATTTGGGCCACTCGAACAAGCGGCATCTCGATGACGATCTGTTGCGTGTCTCTAAATCGAAGAAGCTAGCGGAGGATATTGAAACGGTGCTGCTGAACCACAACAAGCTGATAAGGGTGCCGCTGTCCCTCAACGACTTTACCAATCTGAAGGTGCTGGATCTGAGCAACAATCGCCTCGAGGAGCTGCCGGAGGTGATCACGCAATGCCAGCTGACGACGCTGATCGTAAAGAACAACCTGTTGACGGATAAATCGCTGCCCAAATCATTGCTCGGCGCTGCCGGCCATGGTCTGAAGGAGCTCAATCTGAGCGGCAACCGTTTCGCGCACTTTCCCGAACAGGTTATCGAGCTGCGATCGCTTAAGTATCTCTACCTGGGCGGCAATCAGATCACCAACGTTTCGAAGGACATCTGGAAGCTGCAGAACCTACAGCTCCTGTCACTGGGTGGAAACCTCATTACCGAGATTCCGGAGACCGTCGGGCTGCTCAACCACCTGCACGCGCTCGTCCTCTGTGATAATCTGCTCGAGGCGCTTCCTGCGTCCATAGCCCGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX618407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCACGCAATGCCAGCTGACGACGCTGATCGTAAAGAACAACCTGTTGACGGATAAATCGCTGCCCAAATCATTGCTCGGCGCTGCCGGGCATGGTCTGAAGGAGCTCAATCTGAGCGGCAACCGTTTCGCGCACTTTCCCGAACAGGTGATCGAGCTGCGATCGCTCAAGTATCTCTACCTGGGCGGCAATCAGATCACCAACGTTTCGAAGGACATCTGGAAGCTGCAGAACCTACAGCTCCTGTCACTGGGTGGAAACCTCATTACCGAGATTCCGGAGACCGTCGGGCTGCTCAACCACCTGCACGCGCTCGTCCTCTGTGATAATCTGCTCGAGGCGCTTCCTGCGTCCATAGCCCGTTTGGTCAATCTGAAGTCGCTGTTGCTGCACAAAAATCGTCTAAGACATCTGCCACGGGAGATTATAACGTTGCGAAACCTAACTGAGTTGAGTTTGCGTGATAACCCATTGGTTGTGCGCTTCGTTAAGGATATGACCTTGAATCCACCAAGTTTGCTAGAGCTCGCCGGACGAACTGTGAAAACCTGTGCCATTCGCTACGCAGCGGAAGATCTACCTCGGACCTTGATCGAGTACCTTCAGACGGCCAACTGCTGTGTGAACCCCAATTGCAAAGGAGTATTTTTCGACAATCGTGTAGAGCATATCAAGTTTGTAGATTTCTGTGGCAAATACCGTATTCCTTTGTTGCAGTATTTATGCTCCTCAAAATGCGTTGCAGATACCAGCTCGTCGGATCCGGGCAGCGAGCCAAACAGTAGCATGATGCGTAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX605177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CATTGCTCGGCGCTGCCGGGCATGGTCTGAAGGAGCTCAATCTGAGCGGCAACCGTTTCGCGCACTTTCCCGAACAGGTGATCGAGCTGCGATCGCTCAAGTATCTCTACCTGGGCGGCAATCAGATCACCAACGTTTCGAAGGACATCTGGAAGCTGCAGAACCTACAGCTCCTGTCACTGGGTGGAAACCTCATTACCGAGATTCCGGAGACCGTCGGGCTGCTCAACCACCTGCACGCGCTCGTCCTCTGTGATAATCTGCTCGAGGCGCTTCCTGCGTCCATAGCCCGTTTGGTCAATCTGAAGTCGCTGTTGCTGCACAAAAATCGTCTAAGACATCTGCCACGGGAGATTATAACGTTGCGAAACCTAACTGAGTTGAGTTTGCGTGATAACCCATTGGTTGTGCGCTTCGTTAAGGATATGACCTTGAATCCACCAAGTTTGCTAGAGCTCGCCGGACGAACTGTGAAAACCTGTGCCATTCGCTACGCAGCGGAAGATCTACCTCGGACCTTGATCGAGTACCTTCAGACGGCCAACTGCTGTGTGAACCCCAATTGCAAAGGAGTATTTTTCGACAATCGTGTAGAGCATATCAAGTTTGTAGATTTCTGTGGCAAATACCGTATTCCTTTGTTGCAGTATTTATGCTCCTCAAAATGCGTTGCAGATACCAGCTCGTCGGATCCGGGCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM645421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccGGTCAATCTGAAGTCGCTGTTGCTGCACAAAAATCGTCTAAGACATCTGCCACGGGAGATTATAACGTTGCGAAACCTAACTGAGTTGAGTTTGCGTGATAACCCATTGGTTGTGCGCTTCGTTAAGGATATGACCTTGAATCCACCAAGTTTGCTAGAGCTCGCCGGACGAACTGTGAAAACCTGTGCCATTCGCTACGCAGCGGAAGATCTACCTCGGACCTTGATCGAGTACCTTCAGACGGCCAACTGCTGTGTGAACCCCAATTGCAAAGGAGTATTTTTCGACAATCGTGTAGAGCATATCAAGTTTGTAGATTTCTGTGGCAAATACCGTATTCCTTTGTTGCAGTATTTATGCTCCTCAAAATGCGTTGCAGATACCAGCTCGTCGGATCCGGGCAGCGAGCCAAACAGTAGCATGATGCGTAAGGTGCTACTCGGTTAGTTGGAGGATGTGTTTCTTTGTTAATGGTACAAATTGTTAGAGCTTATCGCCAAAACGCGCCATAAAACGGGTTGACAGTCATAGTACAACATCCATCCTTGAAGCTGGCGTTTCACATCCCCACGCCAGAAAAGGACGGGTCCGATTGTTCCCCCCCCCCCCCTCCCCTATACCTAAAGTGCTACTCTAGTTCAACTGGCTACACTTTCTAGAAGAGAATATCAAAGCAAGGTTATG                                                                                                                                                                                                                                                               ]
[+] EMBL BM583727             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgCGCAGCGGAAGATCTACCTCGGACCTTGATCGAGTACCTTCAGACGGCCAACTGCTGTGTGAACCCCAATTGCAAAGGAGTATTTTTCGACAATCGTGTAGAGCATATCAAGTTTGTAGATTTCTGTGGCAAATACCGTATTCCTTTGTTGCAGTATTTATGCTCCTCAAAATGCGTTGCAGATACCAGCTTGTCGGATCCGGGCAGCGAGCCAAACAGTAGCATGATGCGTAAGGTGCTACTCGGTTAGTTGGAGGATGTGTTTCTTTGTTAATGGTACAAATTGTTAGAGCTTATCGCCAAAACGCGCCATAAAACGGGTTGACAGTCATAGTACAACATCCATCCTTGAAGCT GCGTTTCACATCCCCACGCCAGAAAAGGAACGGTTCGATTGTT       GCCCCCTTCCCTATACCTAAAGTGCTACTCTAGTTCAACTGGCTACACTTTCTAGA                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS099EC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCCCCGCAGGGCCCCTATACCTAAAGTGCTACTCTAGTTCAACTGGCTACACTTTCTAGAAGAGAATATCAAAGCAAGGTTATGATTGTAAATTGCATGACAGAATGTGCACATTGCGATACAAAAGAGGTGGATGGATATCGTCAAACGTTAGAGTGTGTGTGTGGCAAGAAAGGACAGGATGGGTCACCGCAATAGTAGCAGCTGTAACAGCATTCTCTTATCGCAAAGCAGGCGACCGCGACACCTCTTGGAAGGATTATGTGATTTGCTCCAAGAGCAGCTAGATGGGAAGCACTAATATTTACAATATATACATCATATACACAAAACAAAAAA]


>consensus_8898#0 CCGCTGTTACACGGTCTTGGTTTCGGTGCGCCGGAATAAGCGACGTTCTCGCTGTGGCAA TTTGTCTGCTGGAGGCTTTTTCGTTCTCTAACGAAGAGTTGTTAGAGTGGCTTATCTCGT CTGGCGCGCGCGCCACCAGCGTGTTGTGTCGCAGGCAAGTGCCGAACGACCGAAAGCAGT ACAAGTGCCGTTCAACGCCACGGACAAAAGAGGGCAACGGGCAACTTGTGCTAGCTGATA ACATACGACGACGACGACGACGACGGCCCGACCACGAATACACGCACACCTACAAAAAGA TCGTGCTAATACGTGCGATATTTGACCGTAGTGAATTGCCCGGTGTGCGGAAATCTGTAC AAGTGTCCTCTCGAAAAGAAAACGAAAAAAGAGCGAGGCCATAGGGGCTACATCATCCGC CTGGTCGGTTATCTTTCGATGTGCCACGATCAGCGGTGGAACGTGTTCCAGTGGCAGCGC AGTGTGGCAGAGCAGCAGTTTTTCGTGCGGGTGGTTAGTTCACGCCGGCGATAGATAATA CCGAGGGCACACATCGCTTCGATAACGACGAGAAGCTAGCACACAAAATGGATGTCGTCT ACACGTCGGACAGCTGCGATAGCGATTCGCGCGAGCAGAAAACCGTCGATTTGGGCCACT CGAACAAGCGGCATCTCGATGACGATCTGTTGCGTGTCTCTAAATCGAAGAAGCTAGCGG AGGATATTGAAACGGTGCTGCTGAACCACAACAAGCTGATAAGGGTGCCGCTGTCCCTGA ACGACTTTACCAATCTGAAGGTGCTGGATCTGAGCAACAATCGCCTCGAGGAGCTGCCGG AGGTGATCACGCAATGCCAGCTGACGACGCTGATCGTAAAGAACAACCTGTTGACGGATA AATCGCTGCCCAAATCATTGCTCGGCGCTGCCGGGCATGGTCTGAAGGAGCTCAATCTGA GCGGCAACCGTTTCGCGCACTTTCCCGAACAGGTGATCGAGCTGCGATCGCTCAAGTATC TCTACCTGGGCGGCAATCAGATCACCAACGTTTCGAAGGACATCTGGAAGCTGCAGAACC TACAGCTCCTGTCACTGGGTGGAAACCTCATTACCGAGATTCCGGAGACCGTCGGGCTGC TCAACCACCTGCACGCGCTCGTCCTCTGTGATAATCTGCTCGAGGCGCTTCCTGCGTCCA TAGCCCGTTTGGTCAATCTGAAGTCGCTGTTGCTGCACAAAAATCGTCTAAGACATCTGC CACGGGAGATTATAACGTTGCGAAACCTAACTGAGTTGAGTTTGCGTGATAACCCATTGG TTGTGCGCTTCGTTAAGGATATGACCTTGAATCCACCAAGTTTGCTAGAGCTCGCCGGAC GAACTGTGAAAACCTGTGCCATTCGCTACGCAGCGGAAGATCTACCTCGGACCTTGATCG AGTACCTTCAGACGGCCAACTGCTGTGTGAACCCCAATTGCAAAGGAGTATTTTTCGACA ATCGTGTAGAGCATATCAAGTTTGTAGATTTCTGTGGCAAATACCGTATTCCTTTGTTGC AGTATTTATGCTCCTCAAAATGCGTTGCAGATACCAGCTCGTCGGATCCGGGCAGCGAGC CAAACAGTAGCATGATGCGTAAGGTGCTACTCGGTTAGTTGGAGGATGTGTTTCTTTGTT AATGGTACAAATTGTTAGAGCTTATCGCCAAAACGCGCCATAAAACGGGTTGACAGTCAT AGTACAACATCCATCCTTGAAGCTGGCGTTTCACATCCCCACGCCAGAAAAGGACGGGTC CGATTGTTCCCCCCCCCCCCCTCCCCTATACCTAAAGTGCTACTCTAGTTCAACTGGCTA CACTTTCTAGAAGAGAATATCAAAGCAAGGTTATGATTGTAAATTGCATGACAGAATGTG CACATTGCGATACAAAAGAGGTGGATGGATATCGTCAAACGTTAGAGTGTGTGTGTGGCA AGAAAGGACAGGATGGGTCACCGCAATAGTAGCAGCTGTAACAGCATTCTCTTATCGCAA AGCAGGCGACCGCGACACCTCTTGGAAGGATTATGTGATTTGCTCCAAGAGCAGCTAGAT GGGAAGCACTAATATTTACAATATATACATCATATACACAAAACAAAAAA



consensusID : consensus_8898#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1191
fasta sequence
                              [GATCGAACGTGGTGCACCCGTGTGCGTGCGGGCGTGCGAGGTTACGATGAAGGCGAACGAGGTGTGGAACGCCGTTATGAAGGGCGACATGGAGAAGCTGCGCCACTGACCCATGCCAAGGCACCGCGGCCAGACTTTGGCAAGCGGTTCGACAACCATCACTGGAACATACTGCACCACGCCGTCGTCAGCCGCAATCTGGACTGCGTCAAGCTGGTGGTGGACCACTTCCATCCCGCCACCAACGTGCAGTGCTACGAAGGGCTCACCCCGCTGGCGCGCGCCTGCGAGCAGTCCGTGTCGGCCGACATCGTGAGCTACTTGTTGCGTCTGGACCGCAGCGTGGTCAACACGGGGGACACGGAGAGCATCACGCCGCTCCACTACGAAATGTCGAACGATCGGCTGGATCTGGTCGAGCCAGCTGTTGGAAGATTTTGTAGCATTTAGTAACGCATCGTTGAAAACCCTGAAACAAACCGTACGCAACATTATGCCGGCGGTCGTGATGGAAATTCACGCGCTGGATAACGTCAAGATTAACGCGCTGCTGTACGAGCAGTATCAGCGTGCCATCGATTATCTGGCCCTGCTGAACGGCACCGAGCTGGATGCACTCGTTAAACATTTACTCACCGAAGTTGTACGCACAAAGATGGACATGATTTTTCCATGTCTGAAGTATTGTTCTTATGGATTTTTGGCGCGCCGCATCAACGATGCCATACCGAAGAATCCACTATACCAGTGGCTGCTGTACCGGTTTGGCACGTGGCGGGCGATCTACAGTATTATGGGCAGGCCCCAGTTTGAGCTGTTTACGCTGAAACGCTTCGCCCGGGACACCGTGCGGGAGGTTGTGTGGAGAAACATGAACCGGTTGGCGCCGGACAAGGTGCAGATTATGAATGGGCGGCTCCAGTCGCTCGATCTTCCCACTGAGATGAAACTTTATCTTATATATCGCGACAATTCCTCGAAAATGCTGTTTGTTTAGAGGGAAAATTGTCAATTTTTAACGGGGGTTTGGCAGAGACGCGCCAAGGGGAAGTGGGAGAGCATATGAAATAATTATCACTGCATGTAATTCACGGTACCGTGTATATGTATGTTTGGCTGTGTATGTGTTAACGCTTGTTGGTAGACAACGGGCATTACATAAATGGGATAGTTCCCATGATCATTCACGAT]

[+] EMBL CNS09EP3             [GATCGAACGTGGTGCACCCGTGTGCGTGCGGGCGTGCGAGGTTACGATGAAGGCGAACGAGGTGTGGAACGCCGTTATGAAGGGCGACATGGAGAAGCTGCGCCACTGACCCATGCCAAGGCACCGCGGCCAGACTTTGGCAAGCGGTTCGACAACCATCACTGGAACATACTGCACCACGCCGTCGTCAGCCGCAATCTGGACTGCGTCAAGCTGGTGGTGGACCACTTCCATCCCGCCACCAACGTGCAGTGCTACGAAGGGCTCACCCCGCTGGCGCGCGCCTGCGAGCAGTCCGTGTCGGCCGACATCGTGAGCTACTTGTTGCGTCTGGACCGCAGCGTGGTCAACACGGGGGACACGGAGAGCATCACGCCGCTCCACTACGAAATGTCGAACGATCGGCTGGATCTGGTCGAGCCAGCTGTTGGAAGATTTTGTAGCATTTAGTAACGCATCGTTGAAAACCCTGAAACAAACCGTACGCAACATTATGCCGGCGGTCGTGATGGAAATTCACGCGCTGGATAACGTCAAGATTAACGCGCTGCTGTACGAGCAGTATCAGCGTGCCATCGATTATCTGGCCCTGCTGAACGGCACCGAGCTGGATGCACTCGTTAAACATTTACTCACCGAAGTTGTACGCACAAAGATGGACATGATTTTTCCATGTCTGAAGTATTGTTCTTATGGATTTTTGGCGCGCCGCATCAACGATGCCATACCGAAGAATCCACTATACCAGTGGCTGCTGTACCGGTTTGGCACGTGGCGGGCGATCTACAGTATTATGGGCAGGCCCCAGTTTGAGCTGTTTACGCTGAAACGCTTCGCCCGGGACACCGTGCGGGAGGTTGTGTGGAGAAACATGAACCGGTTGGCGCCGGACAAGGTGCAGATTATGAATGGGCGGCTCCAGTCGCTCGATCTTCCCACTGAGATGAAACTTTATCTTATATATCGCGACAATT                                                                                                                                                                                                                         ]
[-] EMBL CNS09EP4             [                                                                                                                                                                                                                                                                                      GCGCGCCTGCGAGCAGTCCGTGTCGGCCGACATCGTGAGCTACTTGTTGCGTCTGGACCGCAGCGTGGTCAACACGGGGGACACGGAGAGCATCACGCCGCTCCACTACGCCGTGTCGAACGATCGGCTGGATCTGGTCGAGCCAGCTGTTGGAAGATTTTGTAGCATTTAGTAACGCATCGTTGAAAACCCTGAAACAAACCGTACGCAACATTATGCCGGCGGTCGTGATGGAAATTCACGCGCTGGATAACGTCAAGATTAACGCGCTGCTGTACGAGCAGTATCAGCGTGCCATCGATTTTCTGGCCCTGCTGAACGGCACCGAGCTGGATGCACTCGTTAAACATTTACTCACCGAAGTTGTACGCACAAAGATGGACATGATTTTTCCATGTCTGAAGTATTGTTCTTATGGATTTTTGGCGCGCCGCATCAACGATGCCATACCGAAGAATCCACTATACCAGTGGCTGCTGTACCGGTTTGGCACGTGGCGGGCGATCTACAGTATTTTGGGCAGGCCCCAGTTTGAGCTGTTTACGCTGAAACG TTCGCCCGGGACACCGTGCGGGAGGTTGTGTGGAGAAACATGAACCGGTTGGCGCCGGACAAGGTGCAGATTATGAATGGGCGGCTCCAGTCGCTCGATCTTCCCACTGAGATGAAACTTTATCTTATATATCGCGACAATTCCTCGAAAATGCTGTTTGTTTAGAGGGAAAATTGTCAATTTTTAACGGGGGTTTGGCAGAGACGCGCCAAGGGGAAGTGGGAGAGCATATGAAATAATTATCACTGCATGTAATTCACGGTACCGTGTATATGTATGTTTGGCTGTGTATGTGTTAACGCTTGTTGGTAGACAACGGGCATTACATAAATGGGATAGTTCCCATGATCATTCACGAT]


>consensus_8898#1 GATCGAACGTGGTGCACCCGTGTGCGTGCGGGCGTGCGAGGTTACGATGAAGGCGAACGA GGTGTGGAACGCCGTTATGAAGGGCGACATGGAGAAGCTGCGCCACTGACCCATGCCAAG GCACCGCGGCCAGACTTTGGCAAGCGGTTCGACAACCATCACTGGAACATACTGCACCAC GCCGTCGTCAGCCGCAATCTGGACTGCGTCAAGCTGGTGGTGGACCACTTCCATCCCGCC ACCAACGTGCAGTGCTACGAAGGGCTCACCCCGCTGGCGCGCGCCTGCGAGCAGTCCGTG TCGGCCGACATCGTGAGCTACTTGTTGCGTCTGGACCGCAGCGTGGTCAACACGGGGGAC ACGGAGAGCATCACGCCGCTCCACTACGAAATGTCGAACGATCGGCTGGATCTGGTCGAG CCAGCTGTTGGAAGATTTTGTAGCATTTAGTAACGCATCGTTGAAAACCCTGAAACAAAC CGTACGCAACATTATGCCGGCGGTCGTGATGGAAATTCACGCGCTGGATAACGTCAAGAT TAACGCGCTGCTGTACGAGCAGTATCAGCGTGCCATCGATTATCTGGCCCTGCTGAACGG CACCGAGCTGGATGCACTCGTTAAACATTTACTCACCGAAGTTGTACGCACAAAGATGGA CATGATTTTTCCATGTCTGAAGTATTGTTCTTATGGATTTTTGGCGCGCCGCATCAACGA TGCCATACCGAAGAATCCACTATACCAGTGGCTGCTGTACCGGTTTGGCACGTGGCGGGC GATCTACAGTATTATGGGCAGGCCCCAGTTTGAGCTGTTTACGCTGAAACGCTTCGCCCG GGACACCGTGCGGGAGGTTGTGTGGAGAAACATGAACCGGTTGGCGCCGGACAAGGTGCA GATTATGAATGGGCGGCTCCAGTCGCTCGATCTTCCCACTGAGATGAAACTTTATCTTAT ATATCGCGACAATTCCTCGAAAATGCTGTTTGTTTAGAGGGAAAATTGTCAATTTTTAAC GGGGGTTTGGCAGAGACGCGCCAAGGGGAAGTGGGAGAGCATATGAAATAATTATCACTG CATGTAATTCACGGTACCGTGTATATGTATGTTTGGCTGTGTATGTGTTAACGCTTGTTG GTAGACAACGGGCATTACATAAATGGGATAGTTCCCATGATCATTCACGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8898#0      CCGCTGTTACACGGTCTTGGTTTCGGTGCGCCGGAATAAGCGACGTTCTCGCTGTGGCAA 60
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TTTGTCTGCTGGAGGCTTTTTCGTTCTCTAACGAAGAGTTGTTAGAGTGGCTTATCTCGT 120
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CTGGCGCGCGCGCCACCAGCGTGTTGTGTCGCAGGCAAGTGCCGAACGACCGAAAGCAGT 180
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ACAAGTGCCGTTCAACGCCACGGACAAAAGAGGGCAACGGGCAACTTGTGCTAGCTGATA 240
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ACATACGACGACGACGACGACGACGGCCCGACCACGAATACACGCACACCTACAAAAAGA 300
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      TCGTGCTAATACGTGCGATATTTGACCGTAGTGAATTGCCCGGTGTGCGGAAATCTGTAC 360
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      AAGTGTCCTCTCGAAAAGAAAACGAAAAAAGAGCGAGGCCATAGGGGCTACATCATCCGC 420
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CTGGTCGGTTATCTTTCGATGTGCCACGATCAGCGGTGGAACGTGTTCCAGTGGCAGCGC 480
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      AGTGTGGCAGAGCAGCAGTTTTTCGTGCGGGTGGTTAGTTCACGCCGGCGATAGATAATA 540
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CCGAGGGCACACATCGCTTCGATAACGACGAGAAGCTAGCACACAAAATGGATGTCGTCT 600
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ACACGTCGGACAGCTGCGATAGCGATTCGCGCGAGCAGAAAACCGTCGATTTGGGCCACT 660
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      CGAACAAGCGGCATCTCGATGACGATCTGTTGCGTGTCTCTAAATCGAAGAAGCTAGCGG 720
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      AGGATATTGAAACGGTGCTGCTGAACCACAACAAGCTGATAAGGGTGCCGCTGTCCCTGA 780
consensus_8898#1      ------------------------------------------------------------
                                                                                  

consensus_8898#0      ACGACTTTACCAATCTGAAGGTGCTGGATCTGAGCAACAATCGCCTCGAGGAGCTGCCGG 840
consensus_8898#1      -----------GATC-GAACGTGGTGCACCCGTGTGCGTGCGGGCGTGCGAGGTTAC--- 45
                                  *** *** *** ** * * * *        * *  * *  * * *   

consensus_8898#0      AGGTGATCACGCAATGCCAGCTGACGACGCTGATCGTAAAGAACAACCTGTTGACGGATA 900
consensus_8898#1      -GATGAAGGCG-AACGAGGTGTGG-AACGCCG-TTATGAAGGGCGACATGGAGA-AGCTG 100
                       * ***   ** ** *     **   **** * *  * ***  * ** **  **  * * 

consensus_8898#0      AATCGCTGCCCAAATCATTGCTCGGCGCTGCCGGGCATGGTCTGAAGGAGCTCAATCTGA 960
consensus_8898#1      CGCCACTGACC----CATGCCAAGGCACCGC-GGCCAGACTTTGG-------CAAGCGGT 148
                         * *** **    ***  *  *** * ** ** **   * **        *** * * 

consensus_8898#0      GCGGCAACCGTTTCGCGCACTTTCCCGAACAGGTGATCG--AGCTGCGATCGCTCAAGTA 1018
consensus_8898#1      TCGACAACCATCACTGGAACATACTGCACCACGCCGTCGTCAGCCGCAATC--TGGACTG 206
                       ** ***** *  *  * ** * *   * ** *   ***  *** ** ***  *  * * 

consensus_8898#0      TCTCTACCTGGGCGGCAATCAGATCACCAACGTTTCGAAGGACATCTGGAAGCTGCAGAA 1078
consensus_8898#1      CGTCAAGCTGGTGG-----TGGACCACTTCCATCCC----GCCACCAACGTGCAGTGCTA 257
                        ** * ****  *       ** ***   * *  *    * ** *     ** *    *

consensus_8898#0      CCTACAGCTCCTGTCACTGGGTGGAAACCTCATTACCGAGATTCCGGAGACCGTCGGGCT 1138
consensus_8898#1      CGAAGGGCTCACCCCGCTGG-CGCGCGCCTG-----CGAGCAGTCCGTGTCGGCCGACAT 311
                      *  *  ****    * ****  *    ***      ****    * * * * * **   *

consensus_8898#0      GCTCAACCACCTGCACGCGCTCGTCCTCTGTGATAATCTGCTCGAGGCGCTTCCTGCGTC 1198
consensus_8898#1      CGTGAGCTACTTGT-TGCGTCTGGACCGCAGCGTGGTCAACACGGGGGACA--CGGAGAG 368
                        * * * ** **   ***   *  *       *  **  * ** **  *   * * *  

consensus_8898#0      CATAGCCCGTTTGGTCAATCTGAAGTCGCTGTTGCTGCACAAAAATCGTCTAAGACATCT 1258
consensus_8898#1      CAT--CACGCCGCTCCACTACGAAATGTCGAACGATCGGCTGGATCTGGTCGAGCCAGCT 426
                      ***  * **      ** *  *** *  *    * *   *   *   *    ** ** **

consensus_8898#0      GCCACGGGAGATTATAACGTTGCGAAACCTAACTGAGTTGAGTTTGCGTGATAACCCATT 1318
consensus_8898#1      GTTGGAAGATTTTGTAGCATTTAGTAACGCATC---GTTGAAAACCCTGAA------ACA 477
                      *      **  ** ** * **  * ***  * *   *****     *   *      *  

consensus_8898#0      GGTTGTGCGCTTCGTTAAGGATATGACCTTGAATCCACCAAGTTTGCTAGAGCTCGCCGG 1378
consensus_8898#1      AACCGTACGCAACATTATGCCGGCGGTCGTGAT----GGAAATTCACG------CGCTGG 527
                          ** ***  * *** *     *  * ***       ** **  *       *** **

consensus_8898#0      ACGAACTGTGAAAACCTGTGCCATTCGCTACGCAGCGGAAGATCTACCTCGGACCT-TGA 1437
consensus_8898#1      ATAA--CGTCAAGATTAACGCGCTGCTGTACG-AGCAGTA--TCAGCGTGCCATCGATTA 582
                      *  *   ** ** *     **  * *  **** *** * *  **  * *   * *  * *

consensus_8898#0      TCGAGTACCTTCAGACGGCCAACTGCTGTGTGAACCCCAATTGCAAAGGAGTATTTTTCG 1497
consensus_8898#1      TCTGGCCCTGCTGAACGGCACCGAGCTGGATGCACTC--GTT--AAACATTTACTCACCG 638
                      **  *  *      *****     ****  ** ** *   **  ***    ** *   **

consensus_8898#0      ACAATCGTGTAGAGCATATCAAGTTTGTAGATTTCTGTGGCAAATACCGTATTCCTTTGT 1557
consensus_8898#1      A-AGTTGTACGCACAAAGATGGACATG-ATTTTTCCATGTCTGA---AGTATTGTTCTTA 693
                      * * * **    *  *         ** *  ****  ** *  *    *****  * *  

consensus_8898#0      TGCAGTATTTATGCTCCTCAAAATGCGTTGCAGATACCAGCTCGTCGGATCCGGGCAGCG 1617
consensus_8898#1      TGGATTTTTGGCGCGCCGCATCA-ACGATGCC-ATACCGAAGAATCC-ACTATACCAGTG 750
                      ** * * **   ** ** **  *  ** ***  *****      **  *      *** *

consensus_8898#0      AGCCAAACAGTAGCATGATGCGTAAGGTGCTACTCGGTTAGTTGGAGGATGTGTTTCTTT 1677
consensus_8898#1      GCTGCTGTACCGGTTTGGCACGTGGCGGGCGATCTACAGTATTAT-GGGCAGGCCCCAGT 809
                              *   *  **   ***   * ** *         **   **    *   *  *

consensus_8898#0      GTTAATGGTACAAATTGTTAGAGCTTATCGCCAAAACGCGCCATAAAACGGGTTGACAGT 1737
consensus_8898#1      TTGAGCTGTTTA---CGCTGAAACGCTTCGCCCGGG-ACACCGTGCGGGAGGTTG----- 860
                       * *   **  *    * *  * *   *****      * ** *      *****     

consensus_8898#0      CATAGTACAACATCCATCCTTGAAGCTGGCGTTTCACATCCC-CACGCCAGAAAAGGACG 1796
consensus_8898#1      TGTGGAGAAACATGAACC-----GGTTGGCGCCGGACAAGGTGCAGATTATGAATGGGCG 915
                        * *   *****  * *      * *****    ***     **    *  ** ** **

consensus_8898#0      GGTCCGATTGTTCCCCCCCCCCCCCTCCCCTATACCTAAAGTGCTACTCTAGTTCAACTG 1856
consensus_8898#1      GCTCCAGTCGCTCGATCTTCCCACTG-------AGATGAAACTTTATCTTA---TATATC 965
                      * ***  * * **   *  *** *         *  * **    **   **    *  * 

consensus_8898#0      GCTACACTTTCTAGAAGAGAATATCAAAGCAAGGTTATGATTGTAAATTGCATGACAGAA 1916
consensus_8898#1      GCGACAATTCCTCGAAAATGCTGTTTGTTTAGAGGGAAAATTGTCAATTTT-TAACGGGG 1024
                      ** *** ** ** *** *   * *      *  *  *  ***** ****   * ** *  

consensus_8898#0      TGTGCACATTGCGATACAAAAGAG--GTGGATGGATATCGTCAAACGTTAGAGTGTGTGT 1974
consensus_8898#1      GTTTGGCAGAGACGCGCCAAGGGGAAGTGGGAGAGCAT-ATGAAATAATTATCACTGCAT 1083
                        *   **  *     * ** * *  ****  *   **  * ***   *      **  *

consensus_8898#0      GTGGCAAGAAAGGACAGGATGGGTCACCGCAATAGTAGCAGCTGTAACAGCATTCTCTTA 2034
consensus_8898#1      GTAATTC-ACGGTACCGTGTATATGTATGTT-TGGCTGTGTATGTGTTAACG----CTTG 1137
                      **      *  * ** *  *   *    *   * *  *    ***   * *     *** 

consensus_8898#0      TCGCAAAGCAGGCGACCGCGACACCTCTTGGAAGGATTATGTGATTTGCTCCAAGAGCAG 2094
consensus_8898#1      TTGGTAGACAA-CGGGCATTACATAAATGGGATAGTTCCCATGATCATTCACGAT----- 1191
                      * *  *  **  **  *   ***    * ***  * *    ****      * *      

consensus_8898#0      CTAGATGGGAAGCACTAATATTTACAATATATACATCATATACACAAAACAAAAAA 2150
consensus_8898#1      --------------------------------------------------------
                                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)