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Anopheles gambiae
cluster # 8901 cluster # 8901       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8901#0 length = 1514 sequences # 10  
consensus_8901#1 length = 903 sequences # 1  
consensus_8901#2 length = 863 sequences # 1  

consensusID : consensus_8901#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1514
fasta sequence
                              [GCGCACAAAACATCGTCGCAAACGCGAGCAAGCAAGTAGTCGGTCGGTGTTTGGG-GGCTCGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGG-CTCAAGGGACAGGAGTTGGGCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGGCGAAACTACGAC-CGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGTAGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGCCCGCCCCGCGCTACATCGAGCTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAAAGATCCTGACCCGCCTGTTCCGGGTGTTTGTGCACGTATACATTCATCATTTCGATAGGATTTTCAGTATTGGCGCGGAAGCGCACGTTAACACCTGCTACAAACATTTCT-ACTACTTCGTGACCGAGTTCGATCTGATGTCAGCGAAAGAACTCGAGCCACTCGCGGTGATGACCTCGCAAATGTGTAAAGACTAAACGGAGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGTTTTCAACGACGGTTAAACAAACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCATGCTCAAGTGACGAATGGCAAGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAACATATAAAAAACGGCCGCGACGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGACCGCGAGACTCACGAGTTATGCAAAGCCTCATCATCAAGCAAAGAAATAAAGTGCAAACAAGAAGAAGTTACAAACAATAATCGGTAAAGGTTTTAACAGATTTTAATAAAAATCAATGACTGTAAATTATCTG]

[+] EMBL CNS08Q6K             [GCGCACAAAACATCGTCGCAAACGCGAACAAGCAAGTAGTCGGTCGGTGTTTGGG GGCTCGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGG CTCAAGGGACAGGAGTTGGGCG ACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGGCGAAACTACGACGCGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08N47             [                       GCGAGCAAGCAAGTAGTCGGTCGGTGTTTGGG GGCTCGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGG CTCAAGGGACAGGAGTTGGGCG ACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGGCGAAACTACGAC CGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGTAGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGCCCGCCCCGCGCTACATCGAGCTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAAAGATCCTGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08MV2             [                           GCTAGCAAGTAGTCGGTCGGTGTTTGGG GGCTCGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGGCCTCAAGGGACAGGAGTTGGGCGAAGTGTGTGCAGTCGTAAAGAGGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08F3G             [                                CAAGTAGTCGGTCGGTGTTTGGGCGGCTCGCCAATTTCCTGCCACCGCTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGG CTCAAGGGACAGGAGTTGGGCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGGCGAAACTACGAC CGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGTAGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGCCCGCCCCGCGCTACATCGAGCTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08U56             [                                               TGTTTGGG GG TCGCC ATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGG CTCAAGGGACAGGAGTTGGGCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGGCGAAACTACGAC CGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGTAGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGCCCGCCCCGCGCTACATCGAGCTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAAAGATCCTGACCCGCCTGTTCCGGGTGTTTGTGCACGTATACATTCATCATTTCGATAGGATTTTCAGTATTGGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS08F3H             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACAACTGGTTAGCAAAGCATGTGGTAGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGC GCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGCCCGCCCCGCGCTACATCGAGCTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAAAGATCCTGACCCGCCTGTTCCGGGTGTTTGTGCACGTATACATTCATCATTTCGATAGGATTTTCAGTATTGGCGCGGAAGCGCACGTTAACACCTGCTACAAACATTTCT ACTACTTCGTGACCGAGTTCGATCTGATGTCAGCGAAAGAACTCGAGCCACTCGCGGTGATGACCTCGCAAATGTGTAAAGACTAAACGGAGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGTTTTCAACGACGGTTAAACAAACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCATGCTCAAGTGACGAATGGCAAGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAACATATAAAAAACGGCCGCGACGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGACCGCGAGACTCACGAGTTATGCAAAGCCTCATCATCAAGCAAAGAAATAAAGTGCAAA                                                                            ]
[-] EMBL CNS08N48             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGCCCGCCCCGCGCTACATCGAGCTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAAAGATCCTGACCCGCCTGTTCCGGGTGTTTGTGCACGTATACATTCATCATTTCGATAGGATTTTCAGTATTGGCGCGGAAGCGCACGTTAACACCTGCTACAAACATTTCTAACTACTTCGTGACCGAGTTCGATCTGATGTCAGCGAAAGAACTCGAGCCACTCGCGGTGATGACCTCGCAAATGTGTAAAGACTAAACGGAGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGTTTTCAACGACGGTTAAACAAACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCATGCTCAAGTGACGAATGGCAAGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAACATATAAAAAACGGCCGCGACGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGACCGCGAGACTCACGAGTTATGCAAAGCCTCATCATCAAGCAAAGAAATAA                                                                                    ]
[-] EMBL CNS08U57             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAAAGATCCTGACCCGCCTGTTCCGGGTGTTTGTGCACGTATACATTCATCATTTCGATAGGATTTTCAGTATTGGCGCGGAAGCGCACGTTAACACCTGCTACAAACATTTCT ACTACTTCGTGACCGAGTTCGATCTGATGTCAGCGAAAGAACTCGAGCCACTCGCGGTGATGACCTCGCAAATGTGTAAAGACTAAACGGAGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGTTTTCAACGACGGTTAAACAAACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCATGCTCAAGTGACGAATGGCAAGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAACATATAAAAAACGGCCGCGACGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGACCGCGAAACTCACGAGTTATGCAAAGCCTCATCATCAAGCAAAGAAATAAAG GCAAACAAGAAGAAGT                                                                 ]
[-] EMBL CNS08Q6L             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCTCGCAAATGTGTAAAGACTAAACGGAGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGTTTTCAACGACGGTTAAACAAACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCATGCTCAAGTGACGAATGGCAAGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAACATATAAAAAACGGCCGCGACGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGACCGCGAAACTCACGAGTTATGCAAAGCCTCATCATCAAGCAAAGAAATAAAGTGCAAACAAGAAGAAGCTACAAACAATAATCGGTAAAGGTTTTAACAGATTTTAATAAAAATCAATGACTGTAAATTATCTG]
[-] EMBL CNS08MV3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGTTTTCAACGACGGTTAAACAAACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCATGCTCAAGTGACGAATGGCAAGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAACATATAAAAAACGGCCGCGACGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGACCGCGATACTCACGAGTTATGCAAAGCCTTATCATCAAGCAAAGAAATAAAGTGCAAA                                                                            ]


>consensus_8901#0 GCGCACAAAACATCGTCGCAAACGCGAGCAAGCAAGTAGTCGGTCGGTGTTTGGGGGCTC GCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGC AGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTA TTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGA GTGCTGGGCCCGCTCAACAAGGCTCAAGGGACAGGAGTTGGGCGAACTGTGTGCAGTCGT AAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCG GACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATT GATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGG CGAAACTACGACCGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGA AAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGC AGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCG GCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGTAGACTTTTTCAACCGAATCAACC TCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCG GCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGC CCGCCCCGCGCTACATCGAGCTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGA CGCTCTTTCCCGTCTCGACCGACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAA AGATCCTGACCCGCCTGTTCCGGGTGTTTGTGCACGTATACATTCATCATTTCGATAGGA TTTTCAGTATTGGCGCGGAAGCGCACGTTAACACCTGCTACAAACATTTCTACTACTTCG TGACCGAGTTCGATCTGATGTCAGCGAAAGAACTCGAGCCACTCGCGGTGATGACCTCGC AAATGTGTAAAGACTAAACGGAGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGT TTTCAACGACGGTTAAACAAACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCA TGCTCAAGTGACGAATGGCAAGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAA CATATAAAAAACGGCCGCGACGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGA CCGCGAGACTCACGAGTTATGCAAAGCCTCATCATCAAGCAAAGAAATAAAGTGCAAACA AGAAGAAGTTACAAACAATAATCGGTAAAGGTTTTAACAGATTTTAATAAAAATCAATGA CTGTAAATTATCTG



consensusID : consensus_8901#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 903
fasta sequence
                              [GCAGAATCCCCCGAGGTTAAACACTGTCGACGATTAGCGGTGGCGCCAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGGCCGGCCCGCGCTACATCGAGCTGCTTGATGGATTGGGTAGAGAACCCCGATCAACNACGCAGACAGCCTCCTTATCCCGTCCTCGTCACCGACGTGNCGCACATATCCCGAGAGNAAAGGCTTTNCCGAGACCTTGGTGGCGGAAAAGATTCCTGAAACCCGGCCTGGTTCCCGCGGCCTGGTATTAGGTGNGACCGNGTATTACCAACTTCACTCCTTTTCGGACTACGGAATTCTCANGGCAATTTGGGCGGCGGGAAAACGCCACCGGTTTAAACAACACCTTGGCTTAACACAAAACATTTATTCCTTAACCTGAACTTCCGGTTGGAACCCGGANGATATNCCGACACTCCTTGGAGTTGGTCACGCNGGAAACAAGNAGACCTCCCGAAGACCACACACTTCCGGCCGGGCTTGGAATTGTACACCCCTCCGCGCCACACACCTTGGCGTTGGGTTATACAACGGGNAGCCCTTAAAACACCCGGNCGGGCAAAGATNCCCGGGGCCGGCNCCAAAACCCGGGAANCGATAACCGACGGCGAACATTTTAACACGTGCTGGGGGTGCCCCCCCGNGCGCTAAGCGTCCCAAACACCCCTAAGGACCNCAAATTTGTGGCCGTGCCACAAANGCATTGGGAAACCCGGCAACANAATTGGGGGGNNGACGAANCGGCGTTANAATACCAACNCCTAAAACNTACCCAGCCAACACAAATCCAACTGTAGGCNCGGCGCCGGCCCCTTAAATATGGGCCCGATAGTATGGGCAGCAGGAAGAAAGCGCAGNAAAAAAC]

[+] EMBL AL933462             [GCAGAATCCCCCGAGGTTAAACACTGTCGACGATTAGCGGTGGCGCCAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGGCCGGCCCGCGCTACATCGAGCTGCTTGATGGATTGGGTAGAGAACCCCGATCAACNACGCAGACAGCCTCCTTATCCCGTCCTCGTCACCGACGTGNCGCACATATCCCGAGAGNAAAGGCTTTNCCGAGACCTTGGTGGCGGAAAAGATTCCTGAAACCCGGCCTGGTTCCCGCGGCCTGGTATTAGGTGNGACCGNGTATTACCAACTTCACTCCTTTTCGGACTACGGAATTCTCANGGCAATTTGGGCGGCGGGAAAACGCCACCGGTTTAAACAACACCTTGGCTTAACACAAAACATTTATTCCTTAACCTGAACTTCCGGTTGGAACCCGGANGATATNCCGACACTCCTTGGAGTTGGTCACGCNGGAAACAAGNAGACCTCCCGAAGACCACACACTTCCGGCCGGGCTTGGAATTGTACACCCCTCCGCGCCACACACCTTGGCGTTGGGTTATACAACGGGNAGCCCTTAAAACACCCGGNCGGGCAAAGATNCCCGGGGCCGGCNCCAAAACCCGGGAANCGATAACCGACGGCGAACATTTTAACACGTGCTGGGGGTGCCCCCCCGNGCGCTAAGCGTCCCAAACACCCCTAAGGACCNCAAATTTGTGGCCGTGCCACAAANGCATTGGGAAACCCGGCAACANAATTGGGGGGNNGACGAANCGGCGTTANAATACCAACNCCTAAAACNTACCCAGCCAACACAAATCCAACTGTAGGCNCGGCGCCGGCCCCTTAAATATGGGCCCGATAGTATGGGCAGCAGGAAGAAAGCGCAGNAAAAAAC]


>consensus_8901#1 GCAGAATCCCCCGAGGTTAAACACTGTCGACGATTAGCGGTGGCGCCAATACGAATACCT GTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGGCCGGCCCGCGCTACATCGA GCTGCTTGATGGATTGGGTAGAGAACCCCGATCAACNACGCAGACAGCCTCCTTATCCCG TCCTCGTCACCGACGTGNCGCACATATCCCGAGAGNAAAGGCTTTNCCGAGACCTTGGTG GCGGAAAAGATTCCTGAAACCCGGCCTGGTTCCCGCGGCCTGGTATTAGGTGNGACCGNG TATTACCAACTTCACTCCTTTTCGGACTACGGAATTCTCANGGCAATTTGGGCGGCGGGA AAACGCCACCGGTTTAAACAACACCTTGGCTTAACACAAAACATTTATTCCTTAACCTGA ACTTCCGGTTGGAACCCGGANGATATNCCGACACTCCTTGGAGTTGGTCACGCNGGAAAC AAGNAGACCTCCCGAAGACCACACACTTCCGGCCGGGCTTGGAATTGTACACCCCTCCGC GCCACACACCTTGGCGTTGGGTTATACAACGGGNAGCCCTTAAAACACCCGGNCGGGCAA AGATNCCCGGGGCCGGCNCCAAAACCCGGGAANCGATAACCGACGGCGAACATTTTAACA CGTGCTGGGGGTGCCCCCCCGNGCGCTAAGCGTCCCAAACACCCCTAAGGACCNCAAATT TGTGGCCGTGCCACAAANGCATTGGGAAACCCGGCAACANAATTGGGGGGNNGACGAANC GGCGTTANAATACCAACNCCTAAAACNTACCCAGCCAACACAAATCCAACTGTAGGCNCG GCGCCGGCCCCTTAAATATGGGCCCGATAGTATGGGCAGCAGGAAGAAAGCGCAGNAAAA AAC



consensusID : consensus_8901#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 863
fasta sequence
                              [AGTCGGTCGGTGTTTGGGGGCTCGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGGCTCAAGGGACAGGAGTTGGGCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGGCGAAACTACGACCGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGTAGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGCGCTACATCGAGCTGCTGATGGGTTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGA]

[+] EMBL CNS09CAL             [AGTCGGTCGGTGTTTGGGGGCTCGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGGCTCAAGGGACAGGAGTTGGGCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAGTGGACGGAACAGCTCAATTGTGGCGAAACTACGACCGTCGAGAATGGCGCTGAACGGATTTTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCACGATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGTAGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAACGTACAAGAAGCCGCGCTACATCGAGCTGCTGATGGGTTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGA]


>consensus_8901#2 AGTCGGTCGGTGTTTGGGGGCTCGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGT GCAATAGAAACTGTGTATTTAGCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCT TTGGTAAGGCTTCCCAGGGTGTATTTGCGTGCAAAACGATGGATTATCGCGCTTGACCCA GAGGACACAGTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGGCTCAAGGGACAGGAG TTGGGCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAG GAATTTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAG GTGCAACGAACGCAAATACTATTGATCGTGAAGCGACGGCGAATACATCTCGCGACCAAG TGGACGGAACAGCTCAATTGTGGCGAAACTACGACCGTCGAGAATGGCGCTGAACGGATT TTTGGAATTCTTCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACCCAGGGCAC GATACGCTACTCGCTGCACAAGCAGGCCAACGCGAGCCTCCAGTCCGGGATCAACCTGAA GGAGGTGGTCAAACTTCCGGCCGGCGAGAACATGAACGACTGGTTAGCGGTGCATGTGGT AGACTTTTTCAACCGAATCAACCTCATCTACGGCACCATCTCGGAGTACTGCAACGAAAC CACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTGTGGGCGGACGGAGAAAC GTACAAGAAGCCGCGCTACATCGAGCTGCTGATGGGTTGGGTAGAGAACCAGATCAACAA CGAGACGCTCTTTCCCGTCTCGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8901#0      GCGCACAAAACATCGTCGCAAACGCGAGCAAGCAAGTAGTCGGTCGGTGTTTGGGGGCT- 59
consensus_8901#2      -------------------------------------AGTCGGTCGGTGTTTGGGGGCT- 22
consensus_8901#1      -----------------GCAGAATCCCCCGAGGTTAAACACTGTCGACGATTAGCGGTGG 43
                                                           *  * ****  * ** * **   

consensus_8901#0      CGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTG-TGTATTTA 118
consensus_8901#2      CGCCAATTTCCTGCCACCACTTTGGCGTGCCGCACTGTGCAATAGAAACTG-TGTATTTA 81
consensus_8901#1      CGCCAATA--CGAATACC-TGTGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTG 100
                      *******   *    ***   * ****  * *      * *  **** * * *  *  * 

consensus_8901#0      GCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAA-------GGCTTCC 171
consensus_8901#2      GCAGATCCGATTAAACTCCAACTTTAGAATAGCGCGGCTTTGGTAA-------GGCTTCC 134
consensus_8901#1      GCCGGCCCGCGCTACATCGAGCTGCTTGATGGATTGGGTAGAGAACCCCGATCAACNACG 160
                      ** *  ***    *  ** * **     ** *   ** *   * *          *  * 

consensus_8901#0      CAGGGTGTAT-----TTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACA 226
consensus_8901#2      CAGGGTGTAT-----TTGCGTGCAAAACGATGGATTATCGCGCTTGACCCAGAGGACACA 189
consensus_8901#1      CAGACAGCCTCCTTATCCCGTCCTCGTCACCGACGTGNCGCACAT-ATCCCGAGAGNAAA 219
                      ***   *  *     *  *** *    *   *   *  *** * * * ** ***   * *

consensus_8901#0      GTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGGCTCAAGGGACAGGAGTTGG----- 281
consensus_8901#2      GTCTGGTTGGTTGAGTGCTGGGCCCGCTCAACAAGGCTCAAGGGACAGGAGTTGG----- 244
consensus_8901#1      GGCT---TTNCCGAGACCTTGG--TGGCGGAAAAGATTCCTGAAACCCGGCCTGGTTCCC 274
                      * **   *    ***  ** **   *    * ***  **  *  **  *   ***     

consensus_8901#0      GCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAAT 341
consensus_8901#2      GCGAACTGTGTGCAGTCGTAAAGAGGTACAGACAGACAGAATGGAACCCAAAAAAGGAAT 304
consensus_8901#1      GCGGCCTGGTATTAGGTGNGACCGNGTATTACCAACTTCACTCCTTTTCGGACTACGGAA 334
                      ***  ***     **  *  *    ***    **     * *      *  *  * * * 

consensus_8901#0      TTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGC 401
consensus_8901#2      TTTCTTCGGCGTTTAATCGGACACATGCAACCACGACGCAGTGCGACAGGCCACAGGTGC 364
consensus_8901#1      TTCTCANGGCAATT--TGGGCGGCGGGAAAACGCCACCGGTTTAAACAACACCTTGGCTT 392
                      **     ***  **  * **   *  * ** * * **    *   ***   *   **   

consensus_8901#0      AACG-AACGCAAATACTATTGATCGTGAAGCGACGGC--GAATACATCTCGCGACCAAGT 458
consensus_8901#2      AACG-AACGCAAATACTATTGATCGTGAAGCGACGGC--GAATACATCTCGCGACCAAGT 421
consensus_8901#1      AACACAAAACATTTATTCCTTAACCTGAACTTCCGGTTGGAACCCGGANGATATNCCGAC 452
                      ***  **  **  ** *  * * * ****    ***   ***  *          *    

consensus_8901#0      GGAC---GGAACAGCTCAATTGTGGCGAAACTACGACCGTCGAGAATGGCGCTGAACGGA 515
consensus_8901#2      GGAC---GGAACAGCTCAATTGTGGCGAAACTACGACCGTCGAGAATGGCGCTGAACGGA 478
consensus_8901#1      ACTCCTTGGAGTTGGTCACGCNGGAAACAAGNAGACCTCCCGAAGACCACACACTTCCGG 512
                         *   ***   * ***     *    **  *   *   ***  *   * *    * * 

consensus_8901#0      TT---TTTGGAATTCT---TCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACC 569
consensus_8901#2      TT---TTTGGAATTCT---TCCAGCGGGAGAAAACGTTTCGACCGAAGAAACGCTTCACC 532
consensus_8901#1      CCGGGCTTGGAATTGTACACCCCTCCGCGCCACACACCTTGGC-GTTGGGTTATACAACG 571
                            ******** *    **  * *    * **   * * * *  *         ** 

consensus_8901#0      CAGGGCACGATACGCTACTCGCTGCACAAGCAGGCC-AACGCGAGCCTCCAGTCCGGGAT 628
consensus_8901#2      CAGGGCACGATACGCTACTCGCTGCACAAGCAGGCC-AACGCGAGCCTCCAGTCCGGGAT 591
consensus_8901#1      GGNAGCCCTTAAAACACCCGGNCGGGCAAAGATNCCCGGGGCCGGCNCCAAAACCCGGG- 630
                          ** *   *  *  *  *  *  ***  *  **    **  **  * *  ** **  

consensus_8901#0      CAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGA-GAACATGAACGACTGGTTAGCGG 687
consensus_8901#2      CAACCTGAAGGAGGTGGTCAAACTTCCGGCCGGCGA-GAACATGAACGACTGGTTAGCGG 650
consensus_8901#1      -AANCGATAACCGACGGCGAACATTTTAACACGTGCTGGGGGTGCCCCCCCG---NGCGC 686
                       ** *   *   *  **  **  **    *  * *  *    **  *  * *    *** 

consensus_8901#0      TGCATGTGGTAGACTTTTTCAACCGAATCAACCTCAT-------CTACGGCACCATCTCG 740
consensus_8901#2      TGCATGTGGTAGACTTTTTCAACCGAATCAACCTCAT-------CTACGGCACCATCTCG 703
consensus_8901#1      TAAGCGTCCCAAACACCCCTAAGGACCNCAAATTTGTGGCCGTGCCACAAANGCATTGGG 746
                      *    **   * **      **      ***  *  *       * **     ***   *

consensus_8901#0      GAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTG 800
consensus_8901#2      GAGTACTGCAACGAAACCACCTGCCCGACGATGAGCGGCGGCGCCAAATACGAATACCTG 763
consensus_8901#1      AAACCCGGCAACANAATTGGGGGGNNGACGA--ANCGGCGTTAN--AATACCAACNCCTA 802
                       *   * *****  **      *   *****  * *****      ***** **  *** 

consensus_8901#0      TGGGCGGACGGAGAAACGTACAAGAAGCCGATACAGCTGCCCGCCCCGCGCTACATCGAG 860
consensus_8901#2      TGGGCGGACGGAGAAACGTACAAGAAGCCG------------------CGCTACATCGAG 805
consensus_8901#1      AAACNTACCCAGCCAACACAAATCCAACTGTAGGCNCGGC--GCCGGCCCCTTAAATATG 860
                              *     ***  * *   * * *                  * **  *    *

consensus_8901#0      CTGCTGATGGATTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGACC 920
consensus_8901#2      CTGCTGATGGGTTGGGTAGAGAACCAGATCAACAACGAGACGCTCTTTCCCGTCTCGA-- 863
consensus_8901#1      GGCCCGATAGTATGGGCAGCAGGAAGAAAGCGCAGNAAAAAAC----------------- 903
                         * *** *  **** **        *    **   * *  *                 

consensus_8901#0      GACGTGCCATTTCCGAAGACGTTTCCGAGCTTGTGCAAAAAGATCCTGACCCGCCTGTTC 980
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      CGGGTGTTTGTGCACGTATACATTCATCATTTCGATAGGATTTTCAGTATTGGCGCGGAA 1040
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      GCGCACGTTAACACCTGCTACAAACATTTCTACTACTTCGTGACCGAGTTCGATCTGATG 1100
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      TCAGCGAAAGAACTCGAGCCACTCGCGGTGATGACCTCGCAAATGTGTAAAGACTAAACG 1160
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      GAGCGCGCACGATACAGGTAAGCAGAACATTCAAGCATGTTTTCAACGACGGTTAAACAA 1220
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      ACACGTGCCACTCGATAAGATACGGCCCGCATCACCAGCATGCTCAAGTGACGAATGGCA 1280
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      AGTAAACAAACAAATCGGCGCGCTATGCTTTGCAAACAAACATATAAAAAACGGCCGCGA 1340
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      CGTCTTGGAAACGCCGAATGGAAGGGAGAACACGGAGCGACCGCGAGACTCACGAGTTAT 1400
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      GCAAAGCCTCATCATCAAGCAAAGAAATAAAGTGCAAACAAGAAGAAGTTACAAACAATA 1460
consensus_8901#2      ------------------------------------------------------------
consensus_8901#1      ------------------------------------------------------------
                                                                                  

consensus_8901#0      ATCGGTAAAGGTTTTAACAGATTTTAATAAAAATCAATGACTGTAAATTATCTG 1514
consensus_8901#2      ------------------------------------------------------
consensus_8901#1      ------------------------------------------------------
                                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)