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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8903#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1260 fasta sequence
[CCGGGCAAGAGAACGACACGTTGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTT-GGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGG-TTAGTGATTTTGTTC-GCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCAAAGGGACCTGGAAGACTGCAGCTTGATCAAGTGACGGACAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAATGGTGGT------GGCGGC------GGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGC]
[+] EMBL BM643559 [CCGGGCAAGAGAACGACACGTTGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCCTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTT GGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGG TTAGTGATTTTGTTCTGC AACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGAGCAGTGACG ]
[+] EMBL BM651643 [ ccgGAGAACGACACGTCGATCGTGCTAAAGTGTGGTGTTGGTGAACTGTTTGTGTACAATTCATAGTTTTAGTTCAAAACATCTG TTTTTTTATTGTGTTGCAACACAACACAAAGCAGGTGTGCGTGTTGTGTGTGTG TGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGTTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTTGGGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTTAGTGATTTTGTTC GCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCAAAGGGAC ]
[+] EMBL BM585129 [ CCGCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTT GGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGG TTAGTGATTTTGTTC GCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCAAAGGGACCTGGAAGACTGCAGCTTGATCAAGTGACGGACAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAATGGTAGT GGCGGC GGCGGTGGAATGCGGCCCCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGg ]
[+] EMBL BX602584 [ ATCAGAGAACAGACAGCGTCGCCCTGCGGCGATACCCAGACGACATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAATGGTGGT GGCGGCGGCGGTGGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGT ]
[+] EMBL BM643709 [ ccgACTGGTACGAGTAATGGTGGTGGCGGCGGCGGC GGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTATGGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGTCCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGC]
consensusID : consensus_8903#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1080 fasta sequence
[CAGAATCGCCNGAGGTNAACGCTCAGCTATCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGGTTTGTCACCACGGCCGAAGGGCAAAGAAGCTGAAGCACCAAAAATCAAAGCCCTACGCGCTGGTGGAAATGTTCCGGCGGAAAGGCGGAAGCTCAAACCTTGCCGAGGGTGTTGGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACCGCGGATGTGTACGATACTATAGCTTTGGCGTGGAGAAAAGCTGCAAAACGCTTCAGCGGAAAACCAGTCTACTCTAGGCACGACACAGCCCAGGGGATGACGGGGGAAGGTCTTTTTAGAGGTTGTACGATTGATGGATTGTGTAAACCTGGTACTCACGATGCGCACTACTACTACTACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGACTATTTAGGGCTAATTAAATTGTAACTGTGCCG-CACACGGGAAATTCCTGCAACAGTATTGGAATGTAGTAAATTTTAGTACGAAATTTTTGTGGGGCTGATGTATTGTGGTGATGAGATTCTAATCAACGGTTCAAGGATGCAGACCGGTTTGCCATAAACACACGATCGAAAGTATCGAAATGAGGAGAAATTCGCAACGCAAAAGTTAGATGTGCTGTTAGATAGATTACTTCCCTTTCTACACTGTCCAAAAAGTGTGACCAAAAGAAGACTTCCCTGATAATGCAGTCAATAGCGATGTTCTAACTGGAGAGGTGAAGATTGATAAACACCTGAAGCGATAGTGGGCTGGGGCTACTAAAGAAGGGGCATGTTGGCGCGTAGATAGCACAGGAACAAGAATTGTTAAAAGAGTATTTATAGTGATAGAGAAGGCGAAGGAAAGATTGGTACGCGTGTTGAAAGCGGAAATGGAAAACTGAAAGGGTGTAAGCAAACGACGGTAGGG]
[+] EMBL AL696916 [CAGAATCGCCNGAGGTNAACGCTCAGCTATCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGGTTTGTCACCACGGCCGAAGGGCAAAGAAGCTGAAGCACCAAAAATCAAAGCCCTACGCGCTGGTGGAAATGTTCCGGCGGAAAGGCGGAAGCTCAAACCTTGCCGAGGGTGTTGGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACCGCGGATGTGTACGATACTATAGCTTTGGCGTGGAGAAAAGCTGCAAAACGCTTCAGCGGAAAACCAGTCTACTCTAGGCACGACACAGCCCAGGGGATGACGGGGGAAGGTCTTTTTAGAGGTTGTACGATTGATGGATTGTGTAAACCTGGTACTCACGATGCGCACTACTACTACTACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGACTATTTAGGGCTAATTAAATTGTAACTGTGCCG CACACGGGAAATTCCTGCAACAGTATTGGAATGTAGTAAATTTTAGTA ]
[+] EMBL BM642362 [ ccggcgcACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGAATATTTAGGGCTAATTAAATTGTAGCTGTGCCGCCACACGGGAAATTCCTGCAACAGTATTGGAATGTAGTAAATTTTAGTACGAAATTTTTGTGGGGCTGATGTATTGTGGTGATGAGATTCTAATCAACGGTTCAAGGATGCAGACCGGTTTGCCATAAACACACGATCGAAAGTATCGAAATGAGGAGAAATTCGCAACGCAAAAGTTAGATGTGCTGTTAGATAGATTACTTCCCTTTCTACACTGTCCAAAAAGTGTGACCAAAAGAAGACTTCCCTGATAATGCAGTCAATAGCGATGTTCTAACTGGAGAGGTGAAGATTGATAAACACCTGAAGCGATAGTGGGCTGGGGCTACTAAAGAAGGGGCATGTTGGCGCGTAGATAGCACAGGAACAAGAATTGTTAAAAGAGTATTTATAGTGATAGAGAAGGCGAAGGAAAGATTGGTACGCGTGTTGAAAGCGGAAATGGAAAACTGAAAGGGTGTAAGCAAACGACGGTAGGG]
consensusID : consensus_8903#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence
[CCGCGACACGTTGATCGTGCTAAAGTGTGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCCTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTTGGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGATTTTGTTCTGCAACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAAAAGGAAAGCGAAAGGGACCTGGAAGACTGCAGCTTGAAGCAGAGACGGGCAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGAC]
[+] EMBL BM639846 [CCGCGACACGTTGATCGTGCTAAAGTGTGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCCTAATTGTCCTCCAGTGCGACCTGCTATCGCGGTGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGGCCGTACGCTTGGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGATTTTGTTCTGCAACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGAGCAGTGACGAAGGGCTTTTGGAAGGGCCTAAAAGGAAAGCGAAAGGGACCTGGAAGACTGCAGCTTGAAGCAGAGACGGGCAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACCCAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGAC]
consensusID : consensus_8903#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence
[CCGTTCAAAACAACGCCGTAGTTCGTTGTTCGAGTGCGACGCATTATATGCCCGCGTGTCACAGTTTCGTTCATAACGAGTTCCAAACAACGGGGACAGAGTGGGAAAAGAAGGAAAAAACACCCTAAAAAACAAAAAATAAACGATACCATAGTGAGCCAAAGCGGTTTGGTGAGGCTTTGCCGTGTATTCGTGTGGACGACGACAACCTGTTGGCGCTGTTGGGGTTTTGTTTGTTGTCATCTTCGCAGCGCAAACCCCCCACCCGTGATGATCGTTGCGTGATCGTGATCTCTACACACAAATACACGCGAGATACGAGACGGCGGAAAAAAAGGGAAACCACCCTATCACGGGAATAGTGTGTTGAAGTTAATTTCCGAGCAGGTTATCGGTGTGTGGATTCGATCGCTGCAATATGGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAG]
[+] EMBL BM642947 [CCGTTCAAAACAACGCCGTAGTTCGTTGTTCGAGTGCGACGCATTATATGCCCGCGTGTCACAGTTTCGTTCATAACGAGTTCCAAACAACGGGGACAGAGTGGGAAAAGAAGGAAAAAACACCCTAAAAAACAAAAAATAAACGATACCATAGTGAGCCAAAGCGGTTTGGTGAGGCTTTGCCGTGTATTCGTGTGGACGACGACAACCTGTTGGCGCTGTTGGGGTTTTGTTTGTTGTCATCTTCGCAGCGCAAACCCCCCACCCGTGATGATCGTTGCGTGATCGTGATCTCTACACACAAATACACGCGAGATACGAGACGGCGGAAAAAAAGGGAAACCACCCTATCACGGGAATAGTGTGTTGAAGTTAATTTCCGAGCAGGTTATCGGTGTGTGGATTCGATCGCTGCAATATGGGTGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAG]
consensusID : consensus_8903#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence
[CCCCCGAGGTTACATTGTGGTGGACGGGGCCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGGCATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCTGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACTGCGGATGTTGTACGATACTATAGCTTTGGCGTGTAGAAAAGCTGCAAACGCTTCAGCGGAAAACAGTCTACTCTAGGCACGGCACAACCCAGGTCGGACTGACGGGGGAAGGTCTTTTTCAAAGGTTGTAGACTTGATGGATTGTGTAAAC]
[+] EMBL AL692970 [CCCCCGAGGTTACATTGTGGTGGACGGGGCCCGATTACGCGCTAACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACCCGGAGATAAGGCATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATCTGCGTGTGCCCTGGTCGGAGAAGTTTGTCACCACGGCCGAGGGCAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAAGCTCAACCTTGCCGAGGTGTTTGACGAGGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCGGACTGCGGATGTTGTACGATACTATAGCTTTGGCGTGTAGAAAAGCTGCAAACGCTTCAGCGGAAAACAGTCTACTCTAGGCACGGCACAACCCAGGTCGGACTGACGGGGGAAGGTCTTTTTCAAAGGTTGTAGACTTGATGGATTGTGTAAAC]
consensusID : consensus_8903#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence
[GCGGCGTGCGTGCATAGTAATAAACCCTTTTCCCGAGTGTTTCTGGTGTCTCTTGTGCAAAGTGGCGAGAATTTACAAAGTGTGTACAAACACAAGCGAACGAAGTGGAAACAATAAAACAGTACAAAACATCCCATCAATCAGTCCAGTCAAGAGTCATCCCCAGGAGCTCAAGACTGGACGCATTGGACGCGGTGAACCAAAGCTGAAGGGGTTGGTAGTGGCGTGCGTGTTGTGTGTGTGTGCTGTTAAGTGCGTTAGGACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGTTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATC]
[+] EMBL BM655632 [GCGGCGTGCGTGCATAGTAATAAACCCTTTTCCCGAGTGTTTCTGGTGTCTCTTGTGCAAAGTGGCGAGAATTTACAAAGTGTGTACAAACACAAGCGAACGAAGTGGAAACAATAAAACAGTACAAAACATCCCATCAATCAGTCCAGTCAAGAGTCATCCCCAGGAGCTCAAGACTGGACGCATTGGACGCGGTGAACCAAAGCTGAAGGGGTTGGTAGTGGCGTGCGTGTTGTGTGTGTGTGCTGTTAAGTGCGTTAGGACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGTTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGCCCTTAATTGTCCTCCAGTGCGACCTGCTATC]
consensusID : consensus_8903#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence
[CCGGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGGTAAAAATAAATGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGGCCCCTAATTGTCCTCCAGT]
[+] EMBL BM580109 [CCGGATCGTGCTAAAGTGTGGTATTGGTGAACTGTTTGTGTACAATTCACAGTTTTAGTTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGGTAAAAATAAATGTGCGTGTTGTGTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCTGCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCGCGGCCATCACAGTGCAATTGTAAATGAGCACACAGCAACCACCACGTCGATGACATTTCCAGCTACGATTGACATTTTTCAACGTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGGCCCCTAATTGTCCTCCAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8903#0 ------------------------------------------------------------
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ------------------------------------------------------------
consensus_8903#4 CCCCCGAGGTTACATTGTGGTGGACGGGGCCCGATTACGCGCTAACGCTGTGGGACACGG 60
consensus_8903#0 ------------------------------------------------------------
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ----------GCGGCGTGCGTGCATAGTAATAAACCCTTTTCCCGAGTGTTTCTGGTGTC 50
consensus_8903#3 ------------------------CCGTTCAAAACAACGCCGTAGTTCGTTGTTCGAGTG 36
consensus_8903#1 --------CAGAATCGCCNGAGGTN---AACGCTCAGCTATCC-AACACCGACTGTTTCC 48
consensus_8903#4 CCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCCCAACACCGACTGTTTCC 120
consensus_8903#0 -----------------------------------------CCGGGCAAGAGAACGACAC 19
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 TCTTGTGCAAAGTGGCGAGAATTTACAAAGT-GTGTACAAACACAAGCGAACGAAGTGGA 109
consensus_8903#3 CGACGCATTATATGCCCGCGTGTCACAGTTTCGTTCATAACGAGTTCCAAACAACGGGGA 96
consensus_8903#1 TCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACC 108
consensus_8903#4 TCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGTGCTGTCCAAGTGGTACC 180
consensus_8903#0 GTTGATCGTGCTAAAGTGTGGTATTG--GTGAACTGTTTGTGTACAATTCACAGTTTTAG 77
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 CCGGATCGTGCTAAAGTGTGGTATTG--GTGAACTGTTTGTGTACAATTCACAGTTTTAG 58
consensus_8903#5 AACAATAAAACAGTACAAAACATCCC--ATCAATCAGTCCAGTCAAGAGTCATCCCCAGG 167
consensus_8903#3 CAGAGTGGGAAAAGAAGGAAAAAACA--CCCTAAAAAACAAAAAATAAACGATACCATAG 154
consensus_8903#1 CGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGTCGG-ACCAAGAGCGATC 167
consensus_8903#4 CGGAGATAAGGCATTTTGCACCCTCCGTACCGATCGTGCTTGTCGGCACCAAGAGCGATC 240
consensus_8903#0 TTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGG----------- 126
consensus_8903#2 -----------------CCGCGACACGTTG-ATCGTGCTA--AAGTGTG----------- 29
consensus_8903#6 TTCAAAACATCTGTTTTTTTTATTGTGTTGCAACACAACACAAAGCAGGGTAAAAATAAA 118
consensus_8903#5 AGCTCAAGACTGGACGCATTGGACGCGGTGAACCAAAGCTGAAGGGGTTG---GTAGTGG 224
consensus_8903#3 TGAGCCAAAGCGGTTTGGT--GAGGCTTTGCCGTGTATTCGTGTGGACGACGACAACCTG 212
consensus_8903#1 TGCGTGTGCCCGGGTCGGA-GAAGGTTTGTCACCACGGCCGAAGGGCAAAGAAGCTGAAG 226
consensus_8903#4 TGCGTGTGCCCTGGTCGGA-GAAG-TTTGTCACCACGGCCGAGGGC--AAGAAGCTGAAG 296
*
consensus_8903#0 TGTGCG-TGTTGTGTGTGTGTATGTTGTTAAGTGCGTT----------AGTACGAAGT-- 173
consensus_8903#2 TGTGCG-TGTTGTGTGTGTGTATGTTGTTAAGTGCGTT----------AGTACGAAGT-- 76
consensus_8903#6 TGTGCG-TGTTGTGTGTGTGTATGTTGTTAAGTGCGTT----------AGTACGAAGT-- 165
consensus_8903#5 CGTGCG-TGTTGTGTGTGTGT--GCTGTTAAGTGCGTT----------AGGACGAAGT-- 269
consensus_8903#3 TTGGCGCTGTTGGGGTTTTGTTTGTTGTCATCTTCGC-----------AGCGCAAACCCC 261
consensus_8903#1 CACCAAAAATCAAAGCCCTACGCGCTGGTGGAAATGTTCCGGCGGAAAGGCGGAAGCTCA 286
consensus_8903#4 CAC--AAAATCAAAGCC-TACGCGCTGGTGGAA-TGTTCC----GCGAAGCGGAAGCTCA 348
* * * ** * * *
consensus_8903#0 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 226
consensus_8903#2 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 129
consensus_8903#6 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 218
consensus_8903#5 ------GATATGATTACAGTGCAA-CGTGGCTGCCGTCCACTGCTCGGACCAACGGAAAC 322
consensus_8903#3 CCACCCGTGATGATCGTTGCGTGATCGTGATCTCTACACACAAATACACGCGAGATACGA 321
consensus_8903#1 AACCTTGCCGAGGGTGTTGGACGA-GGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCG 345
consensus_8903#4 A-CCTTGCCGAGG-TGTTTGACGA-GGCGGTGCGCGCTGTCGAGAAGAAACCACACGCCG 405
* * * * * * * *
consensus_8903#0 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 285
consensus_8903#2 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 188
consensus_8903#6 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 277
consensus_8903#5 GTACGCCAGCTTTGTGCCGTATCG-GGCCATCGCGGCCATCACAGTGCAATTGTAAATGA 381
consensus_8903#3 GACGGCGGAAAAAAAGGGAAACCA-CCCTATCACGGGAAT-AGTGTGTTGAAGTTAATTT 379
consensus_8903#1 GACCGCGGATGT-GTACGATACTATAGCTTTGGCGTGGAGAAAAGCTGCAAAACGCTTCA 404
consensus_8903#4 GACTGCGGATGTTGTACGATACTATAGCTTTGGCGTGTAGAAAAGCTGCAAA-CGCTTCA 464
* ** * * * ** * * * *
consensus_8903#0 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGCTACGATTGACATTTTTCAAC 341
consensus_8903#2 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGCTACGATTGACATTTTTCAAC 244
consensus_8903#6 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGCTACGATTGACATTTTTCAAC 333
consensus_8903#5 GCACACAG-CAACCACCACGTCGAT--GACATT-TCCAGTTACGATTGACATTTTTCAAC 437
consensus_8903#3 CCGAGCAGGTTATCGGTGTGTGGATTCGATCGC-TGCAATATGGGTGTGCGTGTT---GT 435
consensus_8903#1 GCGGAAAACCAGTCTACTC-TAGGCACGACACAGCCCAGG---GGATGACGGGGGAAGGT 460
consensus_8903#4 GCGGAAAAC-AGTCTACTC-TAGGCACGGCACAACCCAGGTCGGACTGACGGGGGAAGGT 522
* * * * * * ** * *
consensus_8903#0 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGG-CCCTTAATTGTCCTCCAGTGCGACC 400
consensus_8903#2 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGG-CCCCTAATTGTCCTCCAGTGCGACC 303
consensus_8903#6 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGGGCCCCTAATTGTCCTCCAGT------ 387
consensus_8903#5 GTGATTAAAAGCCTTCCTGCCCCTTCCACCCGGG-CCCTTAATTGTCCTCCAGTGCGACC 496
consensus_8903#3 GTGTGTGTATGTTGTTAAGTGCGTTAGTACGAAGTGATATGATTACAGTGCAACGTGGCT 495
consensus_8903#1 CTTTTT-AGAGGTTGTACGATTGATGGATTGTGTAAACCTGGTA--CTCACGATGCGCAC 517
consensus_8903#4 CTTTTTCAAAGGTTGTAGACTTGATGGATTGTGTAAAC---------------------- 560
* * * *
consensus_8903#0 TGCTATCGCGG-TGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGG 459
consensus_8903#2 TGCTATCGCGG-TGGCTCTCGCGCAAGCACACGATAAGATACGCGAATACGGTACGCAGG 362
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 TGCTATC----------------------------------------------------- 503
consensus_8903#3 GCCGTCCACTGCTCGGACCAACGGAAACGTACGCCAGCTTTGTGCCGTATCGGGCCATCG 555
consensus_8903#1 TACTACTACTACTACTACTACTACGAGGGGGACTCGTTCGAACTTTAGACGACTATTTAG 577
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 CCGTACGCTTGGGGAAGGTTGTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGA 519
consensus_8903#2 CCGTACGCTTGGGGAAGGTTTTTGCTGTTTGTTTGTCTGTCCGGTGTGGTTGGTTAGTGA 422
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 CGGCCATCACAG------------------------------------------------ 567
consensus_8903#1 GGCTAATTAAATTGTAACTGTGCCGCACACGGGAAATTCCTGCAACAGTATTGGAATGTA 637
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 TTTTGTTCGCAAACTTAAAAATAACCTGTCAGCGAACGGTAAAGTTCTATTCCACAAAGA 579
consensus_8903#2 TTTTGTTCTGCAACTTTAAAATAACCTGCCAGCGAACGATAAAGCTCTATCCCACACAGA 482
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 GTAAATTTTAGTACGAAATTTTTGTGGGGCTGATGTATTGTGGTGATGAGATTCTAATCA 697
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 GCAGTGACGAAGGGCTTTTGGAAGGGCCTAGCA---------AAGGGACCTGGAAGACTG 630
consensus_8903#2 GCAGTGACGAAGGGCTTTTGGAAGGGCCTAAAAGGAAAGCGAAAGGGACCTGGAAGACTG 542
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ACGGTTCAAGGATGCAGACCGGTTTGCCATAAACACACGATCGAAAGTATCGAAATGAGG 757
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 CAGCTTGATCAAGTGACGGACAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACC 690
consensus_8903#2 CAGCTTGAAGCAGAGACGGGCAGAATCAGAGGACAGACAGCGTCGCCCAGCGGCGATACC 602
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 AGAAATTCGCAACGCAAAAGTTAGATGTGCTGTTAGATAGATTACTTCCCTTTCTACACT 817
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 CAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGACGATCACTGGTACGAGTAA 750
consensus_8903#2 CAGACGATATTAGTGGAGTTAATAGTGCCACACAGCTATGAC------------------ 644
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 GTCCAAAAAGTGTGACCAAAAGAAGACTTCCCTGATAATGCAGTCAATAGCGATGTTCTA 877
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 TGGTGGTGGCGGCGGCGGTGGAATGCGGCCTCTGAAGGTAACGACGGTCGGCGACGGTAT 810
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ACTGGAGAGGTGAAGATTGATAAACACCTGAAGCGATAGTGGGCTGGGGCTACTAAAGAA 937
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 GGTCGGGAAGACCTGCATGCTCATCACCTACACGCAGAACGAGTTCCCGAGCGAGTACGT 870
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 GGGGCATGTTGGCGCGTAGATAGCACAGGAACAAGAATTGTTAAAAGAGTATTTATAGTG 997
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 CCCGACCGTGTTCGACAATCACGCGTGCAACATTGTGGTGGACGGGGCCGATTACGCGCT 930
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ATAGAGAAGGCGAAGGAAAGATTGGTACGCGTGTTGAAAGCGGAAATGGAAAACTGAAAG 1057
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 AACGCTGTGGGACACGGCCGGCCAGGAAGATTACGAACGGTTGCGACCGCTCAGCTATCC 990
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 GGTGTAAGCAAACGACGGTAGGG------------------------------------- 1080
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 CAACACCGACTGTTTCCTCATCTGCTACTCCATATCGAACCGCACATCTTTCGATAACGT 1050
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ------------------------------------------------------------
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 GCTGTCCAAGTGGTACCCGGAGATAAGACATTTTGCACCCTCCGTACCGATCGTGCTTGT 1110
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ------------------------------------------------------------
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 CGGCACCAAGAGCGATCTGCGTGTGCCCGGGTCGGAGAAGTTTGTCACCACGGCCGAGGG 1170
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ------------------------------------------------------------
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 CAAGAAGCTGAAGCACAAAATCAAAGCCTACGCGCTGGTGGAATGTTCCGCGAAGCGGAA 1230
consensus_8903#2 ------------------------------------------------------------
consensus_8903#6 ------------------------------------------------------------
consensus_8903#5 ------------------------------------------------------------
consensus_8903#3 ------------------------------------------------------------
consensus_8903#1 ------------------------------------------------------------
consensus_8903#4 ------------------------------------------------------------
consensus_8903#0 GCTCAACCTTGCCGAGGTGTTTGACGAGGC 1260
consensus_8903#2 ------------------------------
consensus_8903#6 ------------------------------
consensus_8903#5 ------------------------------
consensus_8903#3 ------------------------------
consensus_8903#1 ------------------------------
consensus_8903#4 ------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||