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Anopheles gambiae
cluster # 8913 cluster # 8913       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8913#0 length = 1243 sequences # 12  
consensus_8913#1 length = 686 sequences # 1  

consensusID : consensus_8913#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1243
fasta sequence
                              [AAGAATCCCCGAGGTTAAAGTGGTCCTGCTAAAATCTCAGGAACTTAAACCT-TTTTTTG-TATAGGGAATTCATAAT-CATAGGTTTGGAAATAACACGCCCCACAATAT-GAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAG-TTCCATAAAT-AAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC-CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA-TGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGTAGTG-CTCGTA-GATCATCATGTTTCGAGCCTAAATCAGAACATAG-TGGGAATCGTTGAT-CATCGTCCCGTGGAAGCTG-CTGCACGGTTCAACCCAAATGCT-TTTAAAACAATTGAGCTTG-TTGGT-TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG-AAGGATATAACG-TTG-CAT-TGGGGTTAT-TGTAT-GCTGCTATCG-TGCTAGAT-ACTGT-AAACTTTTCCAAAGAAGCCGA-CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTG-CAGATTACGGA-ACAAGTTCGC-TCACTGCATCGAGAGCAACTGTTCAAGTCCTTGGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTTGAAAGATTTGAAAATAATATCACAAAATGATCGTACCGTGGCGGTGCCCGGTTTCCCGATGGCAGTTCAGGAGTACATAAAACTGCCGGAATGGAGAGAGCATCTGAACAGGTTTGCCACCAGCACTGAAAGCAATGTTGTGATTTTGCTCGGAATGAAAGTACACCCTGATGGCAGCGTGCGTCGCGATGTTGGTATCATTCCGATCGATGGCACACCGTTAGCGGAGAAGATTATTGCAGCATTGCACGCATGCCAGGAAATGAATTTTGAGCTCGAAGAAATACCATGTTCGGAGAATGGCACGTTTTATCAGCAACATAATTTAAAAGCGTCGAGAAAACAATTAATACCAATTG-TAAAAATTGCTCAGCACAATACAGTGATCAAATAATGCTACATT]

[+] EMBL AL695079             [AAGAATCCCCGAGGTTAATGTGGTCCTGCTAAAATCTCAGGAACTTAAACCT TTTTTTG TATAGGGAATTCATAATACATAGGTTTGGAAATAACACGCCCCACAATATAGAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAG TTCCATAAAT AAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGCNCACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGATTGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGTAGTG CTCGTAGGATCATCATGTTTCGAGCCTAAATCAGAACATAGNTGGGAATCGTTGATCCATCGTCCCGTGGAAGCTGCCTGCACGGTTCAACCCAAATGCTATTTAAAACAATTGAGCTCGCTTGGTNTCTTGCGCGA CCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAGCAAGGATATAACGTTTGCCATATGGGGTTATNCGTATAGCTGCTATCGCTGCTANATAACTGTGAAACTTTTCCANAGAAGCCGACCAAAGCAAAA CCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTGTGAGATTACGGACAC AGTTCGCNTCACTGCATCCAGAGC ACTGgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS093F9             [                  AGTGGTCCTGCTAAAATCTCGGGAATTTAAACCTGTTTTTTGTTATAGGGAATTCATAAT CATAGCTTTGGAAATAACACGCCCCACAATAT GAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAG TTCCGTAAAT AAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA TGAGATGATTTGTCGTGATGACATCGATTAGCTGACGGAACAAGCCTTGAACGTAGTGCCTCGTA GATCATCATGTTTCGAGCCTAAATCAAAACATAG TGGGAATCGTTGAT CATCGTCCCGTGGAAGCTG CTGCACGGTTCAACCCAAATGCT TTTAAAACAATTGAGCTTG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCGGCTATCG TGCTAGAT ACTGT AAACTTTTCCAAAGAAGCCGA CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTG CAGATTACGGA ACAAGTTCGC TCACTGCATCGAGAGCAACTGTTCAAGTCCTTGGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTTGAAAGATTTGAAAATAATATCACAAAATGATCGTACCGTGGCGGTGCCCGGTTTCCCGATGGCAGTTCAGGAGTACATAAAACTGCCGGAATGGAGAGAGCATCTGAACAGGTTTGCCACCAGCACTGAAAGCAATGTTGTGATTTTGCT                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08WC2             [                  AGTGGTTCTGCTAAAATCTCGGGAATTTAAACCT TTTTTTG TATAGGGAATTCATAAT CATAGCTTTGGAAATAACACGCCCCACAATAT GAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAGCTTCCGTAAATAAAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA TGAGATGATTTGTCGTGATGACATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX622872             [                      GTCCTGCTANAATCTCAGGAACTTAAACCT TTTTTTG TATAGGGAATTCATAAT CATAGGTTTGGAAATAACACGCCCCACAATAT GAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAG TTCCATAAAT AAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA TGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGTAGTG CTCGTA GATCATCATGTTTCGAGCCTAAATCAGAACATAG TGGGAATCGTTGAT CATCGTCCCGTGGAAGCTG CTGCACGGTTCAACCCAAATGCT TTTAAAACAATTGAGCTCG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCTGCTATCG TGCTAGAT ACTGT AAACTTTTCCAAAGAAGCCGA CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTG CAGATTACGGA ACAAGTTCGC TCACTGCATCGAGAGCAACTGGTCAAGTCCTTGGTCGATGCCCGTANCGACGTGTCNGAGCTGAACGCTTATCAGTTGCTGGTG AANA TTG AAAT ATATCGCAAAt                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08FTG             [                      GTCCTGCTAAAATCTCGGGAATTTAAACCT TTTTTTG TATAGGGAATTCATAAT CATAGCTTTGGAAATAACACGCCCCACAATAT GAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAG TTCCGTAAAT AAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA TGAGATGATTTGTCGTGATGACATCGATTGGCTGACGGAACAAGCCTTGAACGTAGTG CTCGTA GATCATCATGTTTCGAGCCTAAATCAAAACATAG TGGGAATCGTTGAT CATCGTCCCGTGGAAGCTG CTGCACGGTTCAACCCAAATGCT TTTAAAACAATTGAGCTTG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCGGCTATCG TGCTAGAT ACTGT AAACTTTTCCAAAGAAGCCGA CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTG CAGATTACGGA ACAAGTTCGC TCACTGCATCGAGAGCAACTGTTCAAGTCCTTGGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTTGAAAGATTTGAAAATAA                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM639845             [                           ccgAAAATCTCAGGAACTTAAACCT TTTTTTG TATAGGGAATTCATAAT CATAGGTTTGGAAATAACACGCCCCACAATAT GAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAG TTCCATAAAT AAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA TGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGTAGTG CTCGTA GATCATCATGTTTCGAGCCTAAATCAGAACATAG TGGGAATCGTTGAT CATCGTCCCGTGGAAGCTG CTGCACGGTTCAACCCAAATGCT TTTAAAACAATTGAGCTCG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCTGCTATCG TGCTAGAT ACTGT AAACTTTTCCAAAGAAGCCGA CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM585525             [                                  ccgCAGGAACTTAAACCT TTTTTTG TATAGGGAATTCATAAT CATAGGTTTGGAAATAACACGCCCCACAATAT GAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAG TTCCATAAAT AAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA TGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGTAGTG CTCGTA GATCATCATGTTTCGAGCCTAAATCAGAACATAG TGGGAATCGTTGAT CATCGTCCCGTGGAAGCTG CTGCACGGTTCAACCCAAATGCT TTTAAAACAATTGAGCTCG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG AAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS093FA             [                                                                                                                                                                                                                                                                                  CCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGC CACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGA TGAGATGATTTGTCGTGATGACATCGATTAGCTGACGGAACAAGCCTTGAACGTAGTG CTCGTA GATCATCATGTTTCGAGCCTAAATCAAAACATAG TGGGAATCGTTGAT CATCGTCCCGTGGAAGCTG CTGCACGGTTCAACCCAAATGCT TTTAAAACAATTGAGCTTG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCGGCTATCG TGCTAGAT ACTGT AAATTTTTCCAAAGAAGCCGA CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTG CAGATTACGGA ACAAGTTCGC TCACTGCATCGAGAGCAACTGTTCAAGTCCTTGGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTTGAAAGATTTGAAAATAATATCACAAAATGATCGTACCGTGGCGGTGCCCGGTTTCCCGATGGCAGTTCAGGAGTACATAAAACTGCCGGAATGGAGAGAGCATCTGAACAGGTTTGCCACCAGCACTGAAAGCAATGTTGTGATTTTGCTCGGAATGAAAGTACACCCTGATGGCAGCGTGCGTCGCGATGTTGGTATCATTCCGATCGATGGCACACCGTTAGCGGAGAAGATTATTGCAGCATTGCACGCATGCCAGGAAATGAATTTTGAGCTCGAAGAAATACCATGTTCGGAGAATGGCACGTTTTATCAGCAACATAATTTAAAAGCGTCGAGAAAACAATTAATACCAATTG TTAAAAATGGTCAGCACAATACAGTGATCAAATAATGCTACATT]
[-] EMBL CNS08FTH             [                                                                                                                                                                                                                                                                                                                                                                                                                           ACGGAACAAGCCTTGAACGTAGTG CTCGTA GATCATCATGTTTCGAGCCTAAATCAAAACATAG TGGGAATCGTTGAT CATCGTCCCGTGGAAGCTG CTGCACGGTTCAACCCAAATGCT TTTAAAACAATTGAGCTTG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCGGCTATCG TGCTAGAT ACTGT AAACTTTTCCAAAGAAGCCGA CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTG CAGATTACGGA ACAAGTTCGC TCACTGCATCGAGAGCAACTGTTCAAGTCCTTGGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTTGAAAGATTTGAAAATAATATCACAAAATGATCGTACCGTGGCGGTGCCCGGTTTCCCGATGGCAGTTCAGGAGTACATAAAACTGCCGGAATGGAGAGAGCATCTGAACAGGTTTGCCACCAGCACTGAAAGCAATGTTGTGATTTTGCTCGGAATGGAAGTACACCCTGATGGCAGCGTGCGTCGCGATGTTGGTATCATTCCGATCGATGGCACACCGTTAGCGGAGAAGATTATTGCAGCATTGCACGCATGCCAGGAAATGAATTTTGAGCTCGAAGAAATACCATGTTCGGAGAATGGCACGTTTTATCAGCAACATAATTTAAAAGCGTCGAGAAAACAATTAATACCAATTGTTAAAAATTGCTCAGCACAATACAGTGATC               ]
[+] EMBL CNS08G6G             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAGCTTG TTGGT TCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATTTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCTGCTATCG TGCTAGAT ACTGT AAACTTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08G6H             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAATTTCGCCCGAAGAGCGAG AAGGATATAACG TTG CAT TGGGGTTAT TGTAT GCTGCTATCG TGCTAGAT ACTGT AAACTTTTCCAAAGAAGCCGA CAAAGCAAAACCCCTCGATTACGATATGGCAGAAAGAATAGAGTCGCAACTG CAGATTACGGA ACAAGTTCGC TCACTGCATCGAGAGCAACTGTTCAAGTCCTTAGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTTGAAAGATTTGAAAATAATATCGCAAAATGATCGTACCGTGGCGGTGCC                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08WC3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTTGAAAGATTTGAAAATAATATCACAAAATGATCGTACCGTGGCGGTGCCCGGTTTCCCGATGGCAGTTCAGGAGTACATAAAACTGCCGGAATGGAGAGAGCATCTGAACAGGTTTGCCACCAGCACTGAAAGCAATGTTGTGATTTTGCTCGGAATGAAAGTACACCCTGATGGCAGCGTGCGTCGCGATGTTGGTATCATTCCGATCGATGGCACACCGTTAGCGGAGAAGATTATTGCAGCATTGCACGCATGCCAGGAAATGAATTTTGAGCTCGAAGAAATACCATGTTCGGAGAATGGCACGTTTTATCAGCAACATAATTTAAAAGCGTCGAGAAAACAATTAATACCAATTG TAAAAATTGCTCAGCACAATACAGTGATCAAATAATGCTt    ]


>consensus_8913#0 AAGAATCCCCGAGGTTAAAGTGGTCCTGCTAAAATCTCAGGAACTTAAACCTTTTTTTGT ATAGGGAATTCATAATCATAGGTTTGGAAATAACACGCCCCACAATATGAACGCATATTT ACAACGATGCCGGAGTGTTCTGAAAAGTTCCATAAATAAAATCGCTGTTATCGGTAACGA AAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTC ACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGT AACGCGCGCCGAGCTGCCACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAAT TGCGCTGGATGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAA CGTAGTGCTCGTAGATCATCATGTTTCGAGCCTAAATCAGAACATAGTGGGAATCGTTGA TCATCGTCCCGTGGAAGCTGCTGCACGGTTCAACCCAAATGCTTTTAAAACAATTGAGCT TGTTGGTTCTTGCGCGACCCTCGTCGGTCGTCAACTGTTTAGCGATGGAATCTCGCCCGA AGAGCGAGAAGGATATAACGTTGCATTGGGGTTATTGTATGCTGCTATCGTGCTAGATAC TGTAAACTTTTCCAAAGAAGCCGACAAAGCAAAACCCCTCGATTACGATATGGCAGAAAG AATAGAGTCGCAACTGCAGATTACGGAACAAGTTCGCTCACTGCATCGAGAGCAACTGTT CAAGTCCTTGGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCAGTTGCTGTT GAAAGATTTGAAAATAATATCACAAAATGATCGTACCGTGGCGGTGCCCGGTTTCCCGAT GGCAGTTCAGGAGTACATAAAACTGCCGGAATGGAGAGAGCATCTGAACAGGTTTGCCAC CAGCACTGAAAGCAATGTTGTGATTTTGCTCGGAATGAAAGTACACCCTGATGGCAGCGT GCGTCGCGATGTTGGTATCATTCCGATCGATGGCACACCGTTAGCGGAGAAGATTATTGC AGCATTGCACGCATGCCAGGAAATGAATTTTGAGCTCGAAGAAATACCATGTTCGGAGAA TGGCACGTTTTATCAGCAACATAATTTAAAAGCGTCGAGAAAACAATTAATACCAATTGT AAAAATTGCTCAGCACAATACAGTGATCAAATAATGCTACATT



consensusID : consensus_8913#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 686
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGAAAATCTCAGGAACTTAAACCTTTTTTTGTATAGGGAATTCATAATCATAGGTTTGGAAATAACACGCCCCACAATATGAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAGTTCCATAAATAAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCACTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGCCACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGATGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGTAGTGCTCGTAGATCATCATGTTTCGAGCCTAAATCAGAACATAGTGGGAATCGTTGATCATCGTCCCGTGGAAGCTGCTGCACGGTTCAACCCAAATGCTTTTAAAACAATTGGAAGCTCCGTTGGTTCTTGCGCGAACCCTCGTCGGTCGTCAACTGGTTTAGCGATGGAATCTCGCCCGAAGAGCGAGAAGGATATAACGTTTGCATTTGGGGGTTATTGTATGGCTGCTATCGTGCTAGATACTGTAAACTTTTCCAAAGAAG]

[+] EMBL BM639213             [CCGCCCACGCGTCCGCCCACGCGTCCGAAAATCTCAGGAACTTAAACCTTTTTTTGTATAGGGAATTCATAATCATAGGTTTGGAAATAACACGCCCCACAATATGAACGCATATTTACAACGATGCCGGAGTGTTCTGAAAAGTTCCATAAATAAAATCGCTGTTATCGGTAACGAAAGCTGTGATCTAGATTCGGCACTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAACGCGCGCCGAGCTGCCACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGCGCTGGATGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGTAGTGCTCGTAGATCATCATGTTTCGAGCCTAAATCAGAACATAGTGGGAATCGTTGATCATCGTCCCGTGGAAGCTGCTGCACGGTTCAACCCAAATGCTTTTAAAACAATTGGAAGCTCCGTTGGTTCTTGCGCGAACCCTCGTCGGTCGTCAACTGGTTTAGCGATGGAATCTCGCCCGAAGAGCGAGAAGGATATAACGTTTGCATTTGGGGGTTATTGTATGGCTGCTATCGTGCTAGATACTGTAAACTTTTCCAAAGAAG]


>consensus_8913#1 CCGCCCACGCGTCCGCCCACGCGTCCGAAAATCTCAGGAACTTAAACCTTTTTTTGTATA GGGAATTCATAATCATAGGTTTGGAAATAACACGCCCCACAATATGAACGCATATTTACA ACGATGCCGGAGTGTTCTGAAAAGTTCCATAAATAAAATCGCTGTTATCGGTAACGAAAG CTGTGATCTAGATTCGGCACTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTCACC GAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGTAAC GCGCGCCGAGCTGCCACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAATTGC GCTGGATGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAACGT AGTGCTCGTAGATCATCATGTTTCGAGCCTAAATCAGAACATAGTGGGAATCGTTGATCA TCGTCCCGTGGAAGCTGCTGCACGGTTCAACCCAAATGCTTTTAAAACAATTGGAAGCTC CGTTGGTTCTTGCGCGAACCCTCGTCGGTCGTCAACTGGTTTAGCGATGGAATCTCGCCC GAAGAGCGAGAAGGATATAACGTTTGCATTTGGGGGTTATTGTATGGCTGCTATCGTGCT AGATACTGTAAACTTTTCCAAAGAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8913#0      AAGAATCCCCGAGGTTAAAGTGGTCCTGCTAAAATCTCAGGAACTTAAACCTTTTTTTGT 60
consensus_8913#1      ---CCGCCCACGCGTCCGCCCACGCGTCCGAAAATCTCAGGAACTTAAACCTTTTTTTGT 57
                            ***    **         * * * ******************************

consensus_8913#0      ATAGGGAATTCATAATCATAGGTTTGGAAATAACACGCCCCACAATATGAACGCATATTT 120
consensus_8913#1      ATAGGGAATTCATAATCATAGGTTTGGAAATAACACGCCCCACAATATGAACGCATATTT 117
                      ************************************************************

consensus_8913#0      ACAACGATGCCGGAGTGTTCTGAAAAGTTCCATAAATAAAATCGCTGTTATCGGTAACGA 180
consensus_8913#1      ACAACGATGCCGGAGTGTTCTGAAAAGTTCCATAAATAAAATCGCTGTTATCGGTAACGA 177
                      ************************************************************

consensus_8913#0      AAGCTGTGATCTAGATTCGGCAGTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTC 240
consensus_8913#1      AAGCTGTGATCTAGATTCGGCACTGAGTGCAATTGCCTTTGCATTTCATCTGCAACACTC 237
                      ********************** *************************************

consensus_8913#0      ACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGT 300
consensus_8913#1      ACCGAAGTTGTTGAGCCCTTGGTACAAGCCCGATACAATAGTTTATCCCGTGCTGAATGT 297
                      ************************************************************

consensus_8913#0      AACGCGCGCCGAGCTGCCACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAAT 360
consensus_8913#1      AACGCGCGCCGAGCTGCCACTGAAAACTGAGGTAACCTTCTTCCTCAAACGACAGGGAAT 357
                      ************************************************************

consensus_8913#0      TGCGCTGGATGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAA 420
consensus_8913#1      TGCGCTGGATGAGCTGATTTGTCGTGATGACATCGATTGGCCGACGGAACAAGCCTTGAA 417
                      ************************************************************

consensus_8913#0      CGTAGTGCTCGTAGATCATCATGTTTCGAGCCTAAATCAGAACATAGTGGGAATCGTTGA 480
consensus_8913#1      CGTAGTGCTCGTAGATCATCATGTTTCGAGCCTAAATCAGAACATAGTGGGAATCGTTGA 477
                      ************************************************************

consensus_8913#0      TCATCGTCCCGTGGAAGCTGCTGCACGGTTCAACCCAAATGCTTTTAAAACAATTG--AG 538
consensus_8913#1      TCATCGTCCCGTGGAAGCTGCTGCACGGTTCAACCCAAATGCTTTTAAAACAATTGGAAG 537
                      ********************************************************  **

consensus_8913#0      CTT-GTTGGTTCTTGCGCGA-CCCTCGTCGGTCGTCAACTG-TTTAGCGATGGAATCTCG 595
consensus_8913#1      CTCCGTTGGTTCTTGCGCGAACCCTCGTCGGTCGTCAACTGGTTTAGCGATGGAATCTCG 597
                      **  **************** ******************** ******************

consensus_8913#0      CCCGAAGAGCGAGAAGGATATAACGTT-GCATT--GGGGTTATTGTATG-CTGCTATCGT 651
consensus_8913#1      CCCGAAGAGCGAGAAGGATATAACGTTTGCATTTGGGGGTTATTGTATGGCTGCTATCGT 657
                      *************************** *****  ************** **********

consensus_8913#0      GCTAGATACTGTAAACTTTTCCAAAGAAGCCGACAAAGCAAAACCCCTCGATTACGATAT 711
consensus_8913#1      GCTAGATACTGTAAACTTTTCCAAAGAAG------------------------------- 686
                      *****************************                               

consensus_8913#0      GGCAGAAAGAATAGAGTCGCAACTGCAGATTACGGAACAAGTTCGCTCACTGCATCGAGA 771
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      GCAACTGTTCAAGTCCTTGGTCGATGCCCGTAGCGACGTGTCGGAGCTGAACGCTTATCA 831
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      GTTGCTGTTGAAAGATTTGAAAATAATATCACAAAATGATCGTACCGTGGCGGTGCCCGG 891
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      TTTCCCGATGGCAGTTCAGGAGTACATAAAACTGCCGGAATGGAGAGAGCATCTGAACAG 951
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      GTTTGCCACCAGCACTGAAAGCAATGTTGTGATTTTGCTCGGAATGAAAGTACACCCTGA 1011
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      TGGCAGCGTGCGTCGCGATGTTGGTATCATTCCGATCGATGGCACACCGTTAGCGGAGAA 1071
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      GATTATTGCAGCATTGCACGCATGCCAGGAAATGAATTTTGAGCTCGAAGAAATACCATG 1131
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      TTCGGAGAATGGCACGTTTTATCAGCAACATAATTTAAAAGCGTCGAGAAAACAATTAAT 1191
consensus_8913#1      ------------------------------------------------------------
                                                                                  

consensus_8913#0      ACCAATTGTAAAAATTGCTCAGCACAATACAGTGATCAAATAATGCTACATT 1243
consensus_8913#1      ----------------------------------------------------
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)