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Anopheles gambiae
cluster # 8917 cluster # 8917       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8917#0 length = 2064 sequences # 12  
consensus_8917#1 length = 624 sequences # 1  

consensusID : consensus_8917#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2064
fasta sequence
                              [CTCTCCATATTTTTTTCAATTCAACTGTTAATTTATTGTCAACGACATATCGACGAAAAGCTACTGTGTTGCTCATGTTACTGCTGTTGCTGCTGCTACTGGCGATTAAGATAGAAATTTTGTCGTGGCGACATTACCGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAACAAAAGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTTTCCCTCACGGGCCCGCTTGGCTGGCCGAGCGGAATAAACAAAAAACAAAACGAGATAGATAGATAACAAATTCGGTAACTACGACTCTGGAATGGAGCAAGGCCTAGAAGGA-GGGGGGTCACCATTTCACAACGCAACATGATTGTAAAAATGCC-CGCCTGGAA--GCGGAA--TTAA-CAACGGGTTACA-TTGGTTTACAACACAGTGGAACAACA-TTC-AACA-TTGCA-CCTAC-ATAAATATAACGAGCA-GG-GGG-GGAAGAGAT--AGAGAGAGACAGACGGAGGACACACTCGTCCGGCAAGGATGACCGGAAAGGGGAGATTGTGTCCGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCCTCCGACACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAGCTTCCCAACACCGAAGCGATCACCCC-AAAAGTGTACCATTTTGTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCAGCT-GGACGCGCCAGCGCT-CGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCC--GGGCAGTGTTTGCCGCCCAGCGGCA-TCTTGAGATCCTGCCAGA-CCACCTTCATGTCGCGCAC-CAG--CTCGT--CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCCGAAGCTTCTCCTCA-CCGC-GCGCC-ACCGTCGG--A-A-GT-TGATCGCCTGCACGTAATGCCCGAAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGCAGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGAATGTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATGAACCCGGCCGCATACGACCGGATCATGTCAATCAGCAGCGCCGTCCCGGCAATGTACCCGCCGACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGGCCCTCCCGCTCGCCAATGCCCGCCCCATGCTCGCCGTACAGCCCGACCGCGTGCACCTCGTCCACGAACGTTAGCGCACCGTACTCGTGCGCGATC-TCGCACAGCTCCTCCAGCGGAC-AGACCGCGCCCG-CATCGAGTGGACCGTCTCGAACGCGACTATCTTCGGCAGCGACCGGTCGACAACCTGCAGCAGCTCGCGCAGATGCGCCGGATCGTTGTGGCGGAAGATGTGCTTCGGCACGCCACTGTTGCGGATGCCCTGTATCATCGAGGCGTGGTTGCCGGCGTCGGAAAAGATGTGACAGCCGGGCAGCGCCTTCGCCAGCGTGAACAGCGTTGAATCGTGTCGGTTACGTGCGTGTTCGGTGTTGATTTTCAAGTCCTAAACACAAAACTCGTTCACCCTCACCTTAGCACAGCTTTGGTCCACCAAGAACGTGGCGGAATACACAACGTACGCGGCGACGATCGCTTTCGTTTCGTCAACCTACTTTTTAGTCGCGGTTGGCCTATGCAAACTCCCTCTTGTTGCTATGGAGACAGACGGGCACACACACACACACGTTTGGGGGAATTGAGAAATCTTTGCCAGCAGCGAAACTTCCGTGGATGATGAAGGTTCAAAA]

[+] EMBL CNS09QUS             [CTCTCCATATTTTTTTCAATTCAACTGTTAATTTATTGTCAACGACATATCGACGAAAAGCTACTGTGTTGCTCATGTTACTGCTGTTGCTGCTGCTACTGGCGATTAAGATAGAAATTTTGTCGTGGCGACATTACCGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAACAAAAGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTTTCCCTCACGGGCCCGCTTGGCTGGCCGAGCGGAATAAACAAAAAACAAAACGAGATAGATAGATAACAAATTCGGTAACTACGACTCTGGAATGGAGCAAGGCCTAGAAGGA GGGGGGTCACCATTTCACAACGCAACGTGATTGTAAAAATGCC CGCCTGGAA  GCGGAA  TTAA CAACGGGTTACA TTGGTTTACAACACAGTGGAACAACA TTC AACA TTGCA CCTAC ATATTTATAACGAGCAGGG GGG GGAAGAGAT  AGAGAGAGACAGACGGAGGACACCCTCGTCCGGCAAGGATAACCGGAAAGGGGAGATTGTGTCCGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCCTCCGACACAACCGGAC  CGAA GACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAGCTTGCCAACACCGAAGCGATCACCCC AAAAGTGTACCATCTTGTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCA CTGGGACGCGCCA CCCTGCGTGCGCGCTTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCC  GGGCAGTGTTTGCCGCCCAGC GCATTCTTGAGATCCTGCCAGA CCACCTTCATGTCGCGCAC CAG  CTCGT  CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL BM582202             [                                                                                                                                                                                                                                                                                                                                         gGGAGGGGGGGTCACCATTTCACAACGCAACATGATTGTAAAAATGCC CGCCTGGAA  GCGGAA  TTAA CAACGGGTTACA TTGGTTTACAACACAGTGGAACAACA TTC AACA TTGCA CCTAC ATAAATATAACGAGCA GG GGG GAAAGAGATAGAGAGAGAGACAAATAGAGGACACACTCGTCCGGCAAGGATAACCGGAAAGGGGAGATTGTGTCCGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCCTCCGACACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAGCTTCCCAACACCGAAGCGATCACCCC AAAAGTGTACCATCTTTTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCATACCGCTCTCTCTCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCACAGCT GGACGCGCCAGCGCT CGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCC  GGGCcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BX617815             [                                                                                                                                                                                                                                                                                                                                                                     AACATGATTGTAAAAATGCC CGCCTGGAA  GCGGAA  TTAA CAACGGGTTACA TTGGTTTACAACACAGTGGAACAACA TTC AACA TTGCA CCTAC ATAAATATAACGAGCA GG GGG GGAAGAGAT  AGAGAGAGACAGACGGAGGACACACTCGTCCGGCAAGGATGACCGGAAAGGGGAGATTGTGTCCGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCCTCCGACACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAGCTTCCCAACACCGAAGCGATCACCCC AAAAGTGTACCATTTTGTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCAGCT GGACGCACCAGCGCT CGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCC  GGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BX468249             [                                                                                                                                                                                                                                                                                                                                                                            ntnaanAAATGCCTCGCCTGGAAANCCGGAACNTTAACCACCGGGTTACACTTGGTTTACAACACAGTGGAACAACAGTTCNAACACTTGCACCCTAC ATAAATATAACGAGCA GGNGGGNGGAAGAGAT  AGAGAGAGACAGACGGAGGACACACTCGTCCGGCAAGGATGACCGGAAAGGGGAGATTGTGTCCGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCCTCCGACACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAGCTTCCCAACACCGAAGCGATCACCCC AAAAGTGTACCATTTTGTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCAGCT GGACGCACCAGCGCT CGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTACGGCAGAAGGCACACTCCTCC  GGGCAGTGTTTGCCGCCCAGCGGCA TCTTGAGATCCTG CAGAGCCACCTTCATGTCGCGCACTTAGACCTCGTGGCGATTCTGGCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BX622599             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCN CCTACAATAAATATAACGAGCA  G GGG GGAAGAGAT  AGAGAGAGACAGACGGAGGACACACTCGTCCGGCAAGGATGACCGGAAAGGGGAGATTGTGTCNGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCNTCCGACACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAGCTTCCCAACACCGAAGCGATCACCCC AAAAGTGTACCATTTTGTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCAGCT GGACGCACCAGCGCT CGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCC  GGGCAGTGTTTGCCGCCCAGCGGCA TCTTGAGATCCTGCCAGA CCACCTTCATGTCGCGCAC CAG  CTCGT  CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCCGAAGCTTCTCCTCA CCGC GCGCC ACCGTCGG  ATA GT TGATCGCCTGCACGTAATGCCCGAAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTGCCGATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL BM618894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCTTTTTTTGGTTCCGCATGTCGATATGTCATTGCGTCCTCCGACACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAGCTTCCCAACACCGAAGCGATCACCCC AAAAGTGTACCATTTTTTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACATCGCTCTC  TCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGAATCTGGCAGTGGAGCTCCTGGGCGCAGCT GGACGCGCCAGCGCT CGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCC  GGGCAGTGTTTGCCGCCCAGCGGCA TCTTGAGATCCTGCCAGA CCACCTTCATGTCGCGCAC CAG  CTCGT  CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCCGAAGCTTCTCCTCA CCGC GCGCC ACCGTCGG  ATA GT TGATCGCCTGCACGTAATGCCCGAAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTGCCGATCTTCACCGGAATGATcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BM634298             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGATCACCCCAAAAAGTGTACCATTTTGTCCCTTCCCCGAGAGCACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATTGGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCAGCT GGACGCGCCAGC CTGCGTGCGCGCTTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCC  GGGCAGTGTTTGCCGCCCAGCGGCA TCTTGAGATCCTGCCAGA CCACCTTCATGTCGCGCAC CAG  CTCGT  CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCCGAAGCTTCTCCTCA CCGC GCGCC ACCGTCGG  ATA GT TGATCGCCTGCACGTAATGCCCGAAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGCAGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL BM645792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCCTGGGCACAGCT GGACGCGCCAGCGCT CGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCCCGGGGCAGTGTTTGCCGCCCAGCGGCA TCTTGAGATCCTGCCAGA CCACCTTCATGTCGCGCAC CAG  CTCGT  CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCCGAAGCTTCTCCTCACCCGCGGCGCCAACCGTTGGGAA A ATATGATCGCCTGCACGTAATGCCCGAAGCGCTGTATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTGCCGATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGCAGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGAATGTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATGAACCCGGCCGCATACGACCGGATCATGTCAATCAGCAGCGCCGTCCCGGCAATGTACCCGCCGACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGGCCCTCGCGCgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BM634364             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTGGGCGCAGCT GGACGCGCCAGC CTGCGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGGCACACTCCTCCG GGGCAGTGTTTGCCGCCCAGCGGCA TCTTGAGATCCTGCCAGA CCACCTTCATGTCGCGCAC CAG  CTCGT  CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCCGAAGCTTCTCCTCA CCGC GCGCC ACCGTCGG  A ATAT TGATCGCCTGCACGTAATGCCCGAAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGCAGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGAATGTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATGAACCCGGCCGCATACGACCGGATCATGTCAATCAGCAGCGCCGTCCCGGCAATGTACCCGCCGACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGGCCCTCCCGCTCGCCAATGCCCGCCCCATGCTCGCCGTACAGCCCGACCGCGTGCACCcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL BM610001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 A CCACCTTCATGTCGCGCAC CAG  CTCGT  CCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCCGAAGTTTCTCCTCA CCGCGGCGCC ACCGTTGG  A A TTCTGATCGCCTGCACGTAATGCCCGAAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGCAGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGAATGTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATGAACCCGGCCGCATACGACCGGATCATGTCAATCAGCAGCGCCGTCCCGGCAATGTACCCGCCGACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGGCCCTCCCGCTCGCCAATGCCCGCCCCATGCTCGCCGTACAGCCCGACCGCGTGCACCTCGTCCACGAACGTTAGCGCACCGTACTCGTGCGCGATC TCGCACAGCTCCTCCAGCCCACGCGTCCGCCCACG CGTCcgcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS09QUR             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGCACGTAATGCCCGAAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCC CTGGCGCAGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGAATGTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATGAACCCGGCCGCATACGACCGGATCATGTCAATCAGCAGC CCGTCCCGGCAATGTACCCGCCGACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGGCCCTCCCGCTCGCCAATGCCCGCCCCATGCTCGCCGTACAGCCCGACCGCGTGCACCTCGTCCACGAACGTTAGCGCACCGTACTCGTGCGCGATCATCGCACAGCTCCTCCAGCGGAC AGACCGCGCCCGACATCGAGTGGACCGTCTCGAACGCGACTATCTTCGGCAGCGACCGGTCGACAACCTGCAGCAGCTCGCGCAGATGCGCCGGATCGTTGTGGCGGAAGATGTGCTTCGGCACGCCACTGTTGCGGATGCCCTGTATCATCGAGGCGTGGTTGCCGGCGTCGGAAAAGATGTGACAGCCGGGCAGCGCCTTCGCCAGCGTGAACAGCGTTGAATCGTGTCGGTTACGTGCGTGTTCGGTGTTGATTTTCAAGTCCTAAACACAAAACTCGTTCACCCTCACCTTAGCACAGCTTTGGTCCACCAAGAACGTGGCGGAATACACAACGTACGCGGCGACGATCGCTTTCGTTTCGTCAACCTACTTTTTAGTCGCGGTTGGCCTATGCAAACTCCCTCTTGTTGCTATGGAGACAGACGGGCACACACACACACACGTTTGGGGGAATTGAGAAATCTTTGCCAGCAGCGAAACTTCCGTGGATGATGAAGGTTCAAAA]
[-] EMBL BM576358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACCGGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGCAGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGAATGTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATGAACCCGGCCGCATACGACCGGATCATGTCAATCAGCAGCGCCGTCCCGGCAATGTACCCGCCGACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGGCCCTCCCGCTCGCCAATGCCCGCCCCATGCTCGCCGTACAGCCCGACCGCGTGCACCTCGTCCACGAACGTTAGCGCACCGTACTCGTGCGCGATC TCGCACAGCTCCTCCAGCGGAC AGACCGCGCCCGACATCGAGTGGACCGTCTCGAACGCGACTATCTTCGGCAGCGACCGGTCGACGCGCTGCAGCAGCTCGCGCAGATGCGCCGGATCGTTGTGGCGGAAGATGTGCTTCGGCACGCCACTGTTGCGGATGCCCTGTATCATCGAGGCGTGGTTGCCGGCGTCGGAAAAGATGTGACAGCCGGGCAGCGCCTTCGCCAGCGTcgg                                                                                                                                                                                                                                                                                                       ]


>consensus_8917#0 CTCTCCATATTTTTTTCAATTCAACTGTTAATTTATTGTCAACGACATATCGACGAAAAG CTACTGTGTTGCTCATGTTACTGCTGTTGCTGCTGCTACTGGCGATTAAGATAGAAATTT TGTCGTGGCGACATTACCGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAA CAAAAGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTTTCCCTCACGGGCCCGCTTG GCTGGCCGAGCGGAATAAACAAAAAACAAAACGAGATAGATAGATAACAAATTCGGTAAC TACGACTCTGGAATGGAGCAAGGCCTAGAAGGAGGGGGGTCACCATTTCACAACGCAACA TGATTGTAAAAATGCCCGCCTGGAAGCGGAATTAACAACGGGTTACATTGGTTTACAACA CAGTGGAACAACATTCAACATTGCACCTACATAAATATAACGAGCAGGGGGGGAAGAGAT AGAGAGAGACAGACGGAGGACACACTCGTCCGGCAAGGATGACCGGAAAGGGGAGATTGT GTCCGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCCTCCGA CACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTACAG CTTCCCAACACCGAAGCGATCACCCCAAAAGTGTACCATTTTGTCCCTTCCCCGAGAGCA CACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATTGG CCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCAGCTGG ACGCGCCAGCGCTCGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAAGG CACACTCCTCCGGGCAGTGTTTGCCGCCCAGCGGCATCTTGAGATCCTGCCAGACCACCT TCATGTCGCGCACCAGCTCGTCCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAGCC GAAGCTTCTCCTCACCGCGCGCCACCGTCGGAAGTTGATCGCCTGCACGTAATGCCCGAA GCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACCGG AATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGCAG ATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGAAT GTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATGAA CCCGGCCGCATACGACCGGATCATGTCAATCAGCAGCGCCGTCCCGGCAATGTACCCGCC GACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGGCC CTCCCGCTCGCCAATGCCCGCCCCATGCTCGCCGTACAGCCCGACCGCGTGCACCTCGTC CACGAACGTTAGCGCACCGTACTCGTGCGCGATCTCGCACAGCTCCTCCAGCGGACAGAC CGCGCCCGCATCGAGTGGACCGTCTCGAACGCGACTATCTTCGGCAGCGACCGGTCGACA ACCTGCAGCAGCTCGCGCAGATGCGCCGGATCGTTGTGGCGGAAGATGTGCTTCGGCACG CCACTGTTGCGGATGCCCTGTATCATCGAGGCGTGGTTGCCGGCGTCGGAAAAGATGTGA CAGCCGGGCAGCGCCTTCGCCAGCGTGAACAGCGTTGAATCGTGTCGGTTACGTGCGTGT TCGGTGTTGATTTTCAAGTCCTAAACACAAAACTCGTTCACCCTCACCTTAGCACAGCTT TGGTCCACCAAGAACGTGGCGGAATACACAACGTACGCGGCGACGATCGCTTTCGTTTCG TCAACCTACTTTTTAGTCGCGGTTGGCCTATGCAAACTCCCTCTTGTTGCTATGGAGACA GACGGGCACACACACACACACGTTTGGGGGAATTGAGAAATCTTTGCCAGCAGCGAAACT TCCGTGGATGATGAAGGTTCAAAA



consensusID : consensus_8917#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 624
fasta sequence
                              [GATTTGAAATAACATTTATTTTAGACGACAGTGTATATAATGTATACTTTTTGTGTGTGTGGAATAGACATTTTCAATTCGACTGTTAATTTATTGTCAACGACATATCGACGAAAAGCTGCTGTGTTGCTCATCGTACTGCTGTTGCTGCTACTAGCGATTAAGATATAAATTTTGTCGTGGGCGACATTACGGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAACAAAAGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTTCCTCACGGCCGCTTGGCTGGCGAGGCATATAAACATAAAACAAAACAAGACAGATAGATAACAAATTCGGTAACTACGACTCTGGAATGGAGCAAGCGCTAGAAGGGAGGGGGGGTCACATTTCACAAACGCAACATGATTGTAAAAATCGCCGCCTGGACTCGGGAATTAACAACGGGTTACATTGGTTACAACACAGTGAACAACAGTCAACATTGCACCTACATAAATATAACGAGCAGGGGGGAAAGAGATAGAGAGAGACAATAGAGGACACACTCTCGCAGATACGAAAGGGAGATTGTGTCGTAATATACGCTTTTGTCGCATGTCGATATGTATGCGTC]

[+] EMBL AGAA13324            [GATTTGAAATAACATTTATTTTAGACGACAGTGTATATAATGTATACTTTTTGTGTGTGTGGAATAGACATTTTCAATTCGACTGTTAATTTATTGTCAACGACATATCGACGAAAAGCTGCTGTGTTGCTCATCGTACTGCTGTTGCTGCTACTAGCGATTAAGATATAAATTTTGTCGTGGGCGACATTACGGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAACAAAAGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTTCCTCACGGCCGCTTGGCTGGCGAGGCATATAAACATAAAACAAAACAAGACAGATAGATAACAAATTCGGTAACTACGACTCTGGAATGGAGCAAGCGCTAGAAGGGAGGGGGGGTCACATTTCACAAACGCAACATGATTGTAAAAATCGCCGCCTGGACTCGGGAATTAACAACGGGTTACATTGGTTACAACACAGTGAACAACAGTCAACATTGCACCTACATAAATATAACGAGCAGGGGGGAAAGAGATAGAGAGAGACAATAGAGGACACACTCTCGCAGATACGAAAGGGAGATTGTGTCGTAATATACGCTTTTGTCGCATGTCGATATGTATGCGTC]


>consensus_8917#1 GATTTGAAATAACATTTATTTTAGACGACAGTGTATATAATGTATACTTTTTGTGTGTGT GGAATAGACATTTTCAATTCGACTGTTAATTTATTGTCAACGACATATCGACGAAAAGCT GCTGTGTTGCTCATCGTACTGCTGTTGCTGCTACTAGCGATTAAGATATAAATTTTGTCG TGGGCGACATTACGGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAACAAA AGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTTCCTCACGGCCGCTTGGCTGGCGA GGCATATAAACATAAAACAAAACAAGACAGATAGATAACAAATTCGGTAACTACGACTCT GGAATGGAGCAAGCGCTAGAAGGGAGGGGGGGTCACATTTCACAAACGCAACATGATTGT AAAAATCGCCGCCTGGACTCGGGAATTAACAACGGGTTACATTGGTTACAACACAGTGAA CAACAGTCAACATTGCACCTACATAAATATAACGAGCAGGGGGGAAAGAGATAGAGAGAG ACAATAGAGGACACACTCTCGCAGATACGAAAGGGAGATTGTGTCGTAATATACGCTTTT GTCGCATGTCGATATGTATGCGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8917#0      ----------------------------------------------CTCTCCATATTT-- 12
consensus_8917#1      GATTTGAAATAACATTTATTTTAGACGACAGTGTATATAATGTATACTTTTTGTGTGTGT 60
                                                                    ** *   * * *  

consensus_8917#0      ----------TTTTCAATTCAACTGTTAATTTATTGTCAACGACATATCGACGAAAAGCT 62
consensus_8917#1      GGAATAGACATTTTCAATTCGACTGTTAATTTATTGTCAACGACATATCGACGAAAAGCT 120
                                ********** ***************************************

consensus_8917#0      ACTGTGTTGCTCATGTTACTGCTGTTGCTGCTGCTACTGGCGATTAAGATAGAAATTTTG 122
consensus_8917#1      GCTGTGTTGCTCATCGTACTGCTGTTGCTGC---TACTAGCGATTAAGATATAAATTTTG 177
                       *************  ***************   **** ************ ********

consensus_8917#0      TCGTGG-CGACATTACCGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAAC 181
consensus_8917#1      TCGTGGGCGACATTACGGCCCAGATTGCATCCGGTGTACGATCTCGCCGGCAGAAACAAC 237
                      ****** ********* *******************************************

consensus_8917#0      AAAAGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTTTCCCTCACGGGCCCGCTTGG 241
consensus_8917#1      AAAAGACAGCTGGTGTTGTAATAAGTAGTAGGTAGAATTT--CCTCACGG--CCGCTTGG 293
                      ****************************************  ********  ********

consensus_8917#0      CTGGCCGAGCGGAATAAACAAAAAACAAAACGAGATAGATAGATAACAAATTCGGTAACT 301
consensus_8917#1      CTGGC-GAGGCATATAAACATAAAACAAAACAAGACAGATAGATAACAAATTCGGTAACT 352
                      ***** ***    ******* ********** *** ************************

consensus_8917#0      ACGACTCTGGAATGGAGCAAGGCCTAGAAGG-AGGGGGGTCACCATTTCACAA-CGCAAC 359
consensus_8917#1      ACGACTCTGGAATGGAGCAAGCGCTAGAAGGGAGGGGGGGTCACATTTCACAAACGCAAC 412
                      *********************  ******** *******    ********** ******

consensus_8917#0      ATGATTGTAAAAATGCCCGCCTGGAAGCGG-AATTAACAACGGGTTACATTGGTTTACAA 418
consensus_8917#1      ATGATTGTAAAAATCGCCGCCTGGACTCGGGAATTAACAACGGGTTACATTGGTT-ACAA 471
                      **************  *********  *** ************************ ****

consensus_8917#0      CACAGTGGAACAACATTCAACATTGCACCTACATAAATATAACGAGCAGGGGGGGAAGAG 478
consensus_8917#1      CACAGTG-AACAACAGTCAACATTGCACCTACATAAATATAACGAGCAGGGGGGAAAGAG 530
                      ******* ******* ************************************** *****

consensus_8917#0      ATAGAGAGAGACAGACGGAGGACACACTCGTCCGGCAAGGATGACCGGAAAGGGGAGATT 538
consensus_8917#1      ATAGAGAGAGACA-ATAGAGGACACACTC---TCGCAGATACGA------AAGGGAGATT 580
                      ************* *  ************     ***   * **      * ********

consensus_8917#0      GTGTCCGAAAATAATACGGCTTTTTTTGATTCCGCATGTCGATATGTCATTGCGTCCTCC 598
consensus_8917#1      GTGTC-----GTAATATACGCTTTTGT-----CGCATGTCGATATGTA--TGCGTC---- 624
                      *****      *****     **** *     ***************   ******    

consensus_8917#0      GACACAACCGGACCGCGAAGGACTATTATACTCTTTTTGCCTGGTTGTCTGCTTGTGTAC 658
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      AGCTTCCCAACACCGAAGCGATCACCCCAAAAGTGTACCATTTTGTCCCTTCCCCGAGAG 718
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CACACCTACACCTCGATGGAAGCAATTTTGCGCCTCACACCGCTCTCTTTCTCTCTAATT 778
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      GGCCACGGCAGCGATCTGCGGGCAGTTCGGTATCTGGCAGTGGAGCTCCTGGGCGCAGCT 838
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      GGACGCGCCAGCGCTCGTGCGCGCCTCGAAGCGATCGAACAGCAGCGGCTTCCGGCAGAA 898
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      GGCACACTCCTCCGGGCAGTGTTTGCCGCCCAGCGGCATCTTGAGATCCTGCCAGACCAC 958
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CTTCATGTCGCGCACCAGCTCGTCCATCATGGCGCGCGTATGGTGAGGCGTCGGAGCCAG 1018
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CCGAAGCTTCTCCTCACCGCGCGCCACCGTCGGAAGTTGATCGCCTGCACGTAATGCCCG 1078
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      AAGCGCTGGATCATGCGGTCCGACAGCTCGGTGCACTGCTGCGGATTCCCAATCTTCACC 1138
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      GGAATGATGTGGCTCGGCGTATGCTCCACCGGGAAGCCCTCCTCCTGCAGCCGCTGGCGC 1198
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      AGATAGCGCACGTTCGACTGGTGGCGGGCGCGCAGCTCGCGGCCCTCCTCCGACGCGAGA 1258
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      ATGTCGACCGCCTTCAGCGCACCGCACAGCACGGTCGGTGGCAGCGAGGTGGTAAAGATG 1318
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      AACCCGGCCGCATACGACCGGATCATGTCAATCAGCAGCGCCGTCCCGGCAATGTACCCG 1378
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CCGACGTTGCCGAACGCCTTCCCGAGCGTGCCGGAAATGATGTCCATGTTGTGCAGCTGG 1438
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CCCTCCCGCTCGCCAATGCCCGCCCCATGCTCGCCGTACAGCCCGACCGCGTGCACCTCG 1498
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      TCCACGAACGTTAGCGCACCGTACTCGTGCGCGATCTCGCACAGCTCCTCCAGCGGACAG 1558
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      ACCGCGCCCGCATCGAGTGGACCGTCTCGAACGCGACTATCTTCGGCAGCGACCGGTCGA 1618
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CAACCTGCAGCAGCTCGCGCAGATGCGCCGGATCGTTGTGGCGGAAGATGTGCTTCGGCA 1678
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CGCCACTGTTGCGGATGCCCTGTATCATCGAGGCGTGGTTGCCGGCGTCGGAAAAGATGT 1738
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      GACAGCCGGGCAGCGCCTTCGCCAGCGTGAACAGCGTTGAATCGTGTCGGTTACGTGCGT 1798
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      GTTCGGTGTTGATTTTCAAGTCCTAAACACAAAACTCGTTCACCCTCACCTTAGCACAGC 1858
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      TTTGGTCCACCAAGAACGTGGCGGAATACACAACGTACGCGGCGACGATCGCTTTCGTTT 1918
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CGTCAACCTACTTTTTAGTCGCGGTTGGCCTATGCAAACTCCCTCTTGTTGCTATGGAGA 1978
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CAGACGGGCACACACACACACACGTTTGGGGGAATTGAGAAATCTTTGCCAGCAGCGAAA 2038
consensus_8917#1      ------------------------------------------------------------
                                                                                  

consensus_8917#0      CTTCCGTGGATGATGAAGGTTCAAAA 2064
consensus_8917#1      --------------------------
                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)