These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8920#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1204 fasta sequence [TGTGCCCTTTTTTTTTTTTTTTTTAGGGATAAAAGATGAATTTATTTGCAACACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT-C-GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG-ACATCGTCCAGGTTTTGCGTG-AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA-TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT-CAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG-TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG-CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT-CGCACGGCGTGAACCTTTTTTTTACCCATTTGGCCAAAAGTTCTCGAGGAATTCCCACCTTTTTTATAAAAAAATTTTCTCTACCGCCAAAAGAAAGGGAACACCCCGAAAGACACGCTCTGAATGCCCCAACCGGGGCGGGACGGAAAAAAAAAAAAAAACAAACGGCCCCGAAGGGGGAAGGA] [-] EMBL CNS092IH [TGTGCCCTTTTTTTTTTTTTTTTTAGGGATAAAAGATGAATTTATTTGCAACACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACA TTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGCTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAG TGCGCGTGTGCAGCGACGGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTGAACCTTTGTTaccaaac ] [+] EMBL CNS08Q38 [ TTTTTTTTTTTACGCCTAAAAGATGAATTTATTTGCAAAACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTCCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAGCTGCGCGTGTTCAGCGACA CCCCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATTTTCTTTTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGAATGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTTTCCTGCACCTCGG TGACGCGCGCCAACACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTG ] [+] EMBL CNS092II [ AAAAGATGAATTTATTTGC ACACTCTGAACACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGCTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCA CTTGCCGTACTT CAAGCTGCGCGTGTTCAGCGACGGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTGGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTTCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTTAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTTAGC ] [+] EMBL CNS09430 [ AACACCCCCTCACACCCCCAACACCCCCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCC C GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGCCCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AA CCTCCCCCTTCGCCTCCTTCACTGTTCATCATCGGGGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCA CTTGCCGTACTT CAAGCTGCGCGTGTTCA ] [-] EMBL CNS08HMQ [ CACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT C GGACAC TCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGAAGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTTCCAAG TGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAAAAAAAGTCAACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCGACCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTG ] [-] EMBL CNS08Q37 [ CTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCATGCATTCCTGGTGCAGCAGCT CGGGACA TTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAG TGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGGCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTGAAC ] [-] EMBL CNS0942Z [ TCCTGGTGCAGCACCTCC GGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGCTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACG ACATCGTCCAGGTTTTGCGTG AAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAG TGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTT CGCACGGCGTGAACC TTTGTTTACCCA ] [+] EMBL CNS08HMR [ CTTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGTTGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGTACATCGTCCAGGTTTTGCGTGTAAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAA TCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTTTTAAAGTGCTTATTTTGCCGCTGTATCAGAAAAAGAAAAAAAAAAAAAAAAATGCCCTGCGCCACCTTGCCGGACTT CAAGCGGCGCGGGTGCAGCGACAG GCCCCGTCCGAGTGGACGTTCTGCACCCCGGCCGAGAATAGATCGCCCCCCTGCAGGGACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTGGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTTTTTGCGCGCCAACACCAAGTCCCCGATTTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGGGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTTAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATAAAGCCCTGCTGACTCGTCACGACCTCG CCGGGTGTTAATAGACGCTGGCTTTTGCTTTCATCGCTGAAGAGTGGAATTTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTTCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAA CGAGTGACTTAACCCTT TGCACGGCGTAAACCTTTTTTTTACCCATTTGGCCAAAAGTTCTCGAGGAATTCCCACCTTTTTTATAAAAAAATTTTCTCTACCGCCAAAAGAAAGGGAACACCCCGAAAGACACGCTCTGAATGCCCCAACCGGGGCGGGACGGAAAAAAAAAAAAAAACAAACGGCCCCGAAGGGGGAAGGA] [-] EMBL BM593303 [ CGAGATCCAAATGAACCCCATTGTTGCCCAGTATAATCGATGCACCGCACGGTAGATTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTT CAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCACGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTAAACAAAAAAAGGAAGTAGAATCGAGCGACAGAGCCCcg g ] [-] EMBL BM618585 [ TTGTTGCCCAGTATAATCGACGCACCGCACGGCAGATTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGTATGCCCTGCGCCAGCTTGCCGTACTT CAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGG TGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCG CCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCATTGCTGCAGGA CGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCCGGAC GCGTGggcgg ] consensusID : consensus_8920#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 894 fasta sequence [TTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTTCAAGTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCCACGGCGTGAACCTTTGTGGCCAAACCCAG] [-] EMBL CNS0961Y [TTTTGCGACTCCTCGTACGCGTACAGTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGAGCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGCCTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAGAATGCCCTGCGCCAGCTTGCCGTACTTCAAGTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCACGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCATTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCCACGGCGTGAACCTTTGTGGCCAAACCCAG] [+] EMBL CNS0961Z [ TCGGGGAAATCCAAATGAATCCATTGTTGCCCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCAAAATGCCCTGCG ] consensusID : consensus_8920#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence [CGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCCAGTATGCCCTGCGCCAGCTTTGCCGTACTTCAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCATTGCTGCAGGACGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCGCACGGCGCCCACGCGTCCGCGG] [-] EMBL BM584033 [CGTTTTGCGCCGCTGTATCAGCGACGGGAACACCTTCACCCAGTATGCCCTGCGCCAGCTTTGCCGTACTTCAAGCTGCGCGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATCGCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTCGCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTCCACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGGTCCCCGATCTCGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCACGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGAAGCCCTGCTGGCTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCATCGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCATTGCTGCAGGACGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCCTTCGCACGGCGCCCACGCGTCCGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8920#0 TGTGCCCTTTTTTTTTTTTTTTTTAGGGATAAAAGATGAATTTATTTGCAACACTCTGAA 60 consensus_8920#1 ------------------------------------------------------------ consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 CACCGCCTCACACCTCCAGCACCCGCAAACGGTGCTGCGTTAGGAACGCAATGTCGGTCA 120 consensus_8920#1 ------------------------------------------------------------ consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 TGCATTCCTGGTGCAGCAGCTCGGACACTTCGTACTTTTGCGACTCCTCGTACGCGTACA 180 consensus_8920#1 -----------------------------------TTTTGCGACTCCTCGTACGCGTACA 25 consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 GTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGA 240 consensus_8920#1 GTATGCTGGTGTCGTACAGCATCATCTTGCAGTGGGCCAGCGCTAGGATGCAGTTCCTGA 85 consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 GCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGC 300 consensus_8920#1 GCCGCGCAATCGTTTGGCGATCCTCCTTCGTCACGACATCGTCCAGGTTTTGCGTGAAGC 145 consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 CTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGC 360 consensus_8920#1 CTCCTCCTTCGCCTCCTTCACTGTTCATCATCGGCGAAATCCAAATGAATCCATTGTTGC 205 consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 CCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCA 420 consensus_8920#1 CCAGTATAATCGACGCACCGCACGGCAGGTTGTGAAAGTGCGTTTTGCGCCGCTGTATCA 265 consensus_8920#2 ----------------------------------------CGTTTTGCGCCGCTGTATCA 20 ******************** consensus_8920#0 GCGACGGGAACACCTTCACC-AGAATGCCCTGCGCCAGCTT-GCCGTACTTCAAGCTGCG 478 consensus_8920#1 GCGACGGGAACACCTTCACC-AGAATGCCCTGCGCCAGCTT-GCCGTACTTCAAG-TGCG 322 consensus_8920#2 GCGACGGGAACACCTTCACCCAGTATGCCCTGCGCCAGCTTTGCCGTACTTCAAGCTGCG 80 ******************** ** ***************** ************* **** consensus_8920#0 CGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATC 538 consensus_8920#1 CGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATTAGATC 382 consensus_8920#2 CGTGTGCAGCGACAGCGTCCCGTCCGAGTGGACGTTCTGCACCTCGGCCGAGATCAGATC 140 ****************************************************** ***** consensus_8920#0 GCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTC 598 consensus_8920#1 GCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTC 442 consensus_8920#2 GCCCTCCTGCAGGTACTTGCGCATCTGCTTCTCGTCCTCGACGCCACGCCGCCGTAGCTC 200 ************************************************************ consensus_8920#0 GCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTC 658 consensus_8920#1 GCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTC 502 consensus_8920#2 GCCGCCCGGCAGATTGACCGAGGACAGCAGCAGCATCGAGTCGAGCCGCGAGTTGGTGTC 260 ************************************************************ consensus_8920#0 CACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACG-TCCCCGATCT 717 consensus_8920#1 CACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACG-TCCCCGATCT 561 consensus_8920#2 CACCTTCCAGCGCTTCTCCTGCACCTCGGTGACGCGCGCCACCACCACGGTCCCCGATCT 320 ************************************************* ********** consensus_8920#0 CGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCA 777 consensus_8920#1 CGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTGATCAGCTTGTTCACCTGTACCATCA 621 consensus_8920#2 CGCCCACGTACCGGCCCTTGAGCGCTTTCACCGTTATCAGCTTGTTCACCTGTACCATCA 380 ********************************** ************************* consensus_8920#0 CGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGA 837 consensus_8920#1 CGCCCGCGACTGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGA 681 consensus_8920#2 CGCCCGCGACGGAGGATTTGATCGTATCGTCCTCCATGTACGTGCCGTGGCCGCGCATGA 440 ********** ************************************************* consensus_8920#0 AGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCAT 897 consensus_8920#1 AGCCCTGCTGACTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCAT 741 consensus_8920#2 AGCCCTGCTGGCTCGTCACGACCTCGCCGGGTGTGAATAGACGCTGGCTTTTGCTTTCAT 500 ********** ************************************************* consensus_8920#0 CGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCA 957 consensus_8920#1 CGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTGGAGTTCA 801 consensus_8920#2 CGCTGATGAGTGGAATGTTTACCCGGTCGCAAGCTAACCGGATGGACACGTTTGAGTTCA 560 **************************************************** ******* consensus_8920#0 TTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCC 1017 consensus_8920#1 TTGCTGCACTATGCGAATATTTTACACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCC 861 consensus_8920#2 TTGCTGCAGGA--CGAATGTTTTAAACAAAAAACCGGGGTGAAATCGAGCGACTGAGCCC 618 ******** * ***** ***** *********************************** consensus_8920#0 TTCGCACGGCGTGAACCTTTTTTTTACCCATTTGGCCAAAAGTTCTCGAGGAATTCCCAC 1077 consensus_8920#1 TTC-CACGGCGTGAACCTTTGTGGC-CAAACCCAG------------------------- 894 consensus_8920#2 TTCGCACGGCGCCCACGCGTCCGCGG---------------------------------- 644 *** ******* ** * consensus_8920#0 CTTTTTTATAAAAAAATTTTCTCTACCGCCAAAAGAAAGGGAACACCCCGAAAGACACGC 1137 consensus_8920#1 ------------------------------------------------------------ consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 TCTGAATGCCCCAACCGGGGCGGGACGGAAAAAAAAAAAAAAACAAACGGCCCCGAAGGG 1197 consensus_8920#1 ------------------------------------------------------------ consensus_8920#2 ------------------------------------------------------------ consensus_8920#0 GGAAGGA 1204 consensus_8920#1 ------- consensus_8920#2 ------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||