These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8926#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2028 fasta sequence [CCGAAGGACGTGTGCATGCTCACCGCCCGCCGGTTCTGGATCACCAACATCGACGGGCCGGCCGGCGTACTGAGGACGAAGGCGGTGCTGCTGCAGCACCTGCACCTGCAGCAGAAGCAGCAAGGCCATGCGCAACCGCCGGCTTCGTCCAGTGCCGGCGATGAGACGGATCTAGCCGGCAACGGGGGCAAAGGCGGCGGCGCGGTGGAACCGAAAGCTACGCAGCTACCGAACAATCTCGACAGTGCGGCACAACCAAACAACAACACCGGCAGCAACCGTACGCCGGAACGAAAGCCCGTCAAGTGTAACAACATCATCGGCGCGGACGTGGACGTGGCCAGCTTGAAGCGTAAATCGTTCGGCAACATTAACGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGGTGGAAGCTTTCCCTCCACGGTAGTTACTATTAATTTAATTTAATTATCAGGGGTTACACTAAAGACATCGTTTATTCGTTGCATTGCTCGGGGCTTGTCGTAGTGAGGGAAGAAACGGATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGCGTAACAGAGAGCACTGGAAACTGTTTGTGATATTGTTTTGTTTTTTAATCAGATAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA-------A-AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATACTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAACTTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTAT-AAAATACTCCATCTTTTCTCGTGCGGGCAGATGCAGTCGTCGAGCAGAAGGAAAAGCAAGAGAGATTGTTGAAAGAGTAG] [+] EMBL BM598724 [CCGAAGGACGTGTGCATGCTCACCGCCCGCCGGTTCTGGATCACCAACATCGACGGGCCGGCCGGCGTACTGAGGACGAAGGCGGTGCTGCTGCAGCACCTGCACCTGCAGCAGAAGCAGCAAGGCCATGCGCAACCGCCGGCTTCGTCCAGTGCCGGCGATGAGACGGATCTAGCCGGCAACGGGGGCAAAGGCGGCGGCGCGGTGGAACCGAAAGCTACGCAGCTACCGAACAATCTCGACAGTGCGGCACAACCAAACAACAACACCGGCAGCAACCGTACGCCGGAACGAAAGCCCGTCAAGTGTAACAACATCATCGGCGCGGACGTGGACGTGGCCAGCTTGAAGCGTAAATCGTTCGGCAACATTAACGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGC ] [+] EMBL BX602757 [ gcAAATCGTTCGGCAACATTAGCGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGGTGGAAGCTTTCCCTCCACGGTAGTTACTATTAATTTAATTTAATTATCAGGGGTTACACTAAAGACATCGTTTATTCGTTGCATTGCTCGGGGCTTGTCGTAGTGAGGGAAGAAACGGATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGA ] [+] EMBL BX608005 [ TTTGAAGCTGAACAACAATAATAACAATAATAACAACATTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGGTGGAAGCTTTCCCTCCACGGTAGTTACTATTAATTTAATTTAATTATCAGGGGTTACACTAAAGACATCGTTTATTCGTTGCATTGCTCGGGGCTTGTCGTAGTGAGGGAAGAAACGGATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACC ] [+] EMBL BX621619 [ GATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGCGTAACAGAGAGCACTGGAAACTGTTTGTGATATTGTTTTGTTTTTTAATCAGATAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACT ] [+] EMBL BX625675 [ GATACTATACTATAGTCTGTAATGTTGTGTACTTCGTTTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGCCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGCGTAACAGAGAGCACTGGAAACTGTTTGTGATATTGTTTTGTTTTTTAATCAGATAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTTGTTTGTTTTANGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCNAGTCCAGTGCAGCATTATTGGGTATGA ] [+] EMBL BM575898 [ ccgGTGGAAGTG TTT TTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACATGGTACCGACGAAATGTGGTTTGGTGTAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGTTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCTAGTGCGATTGGGCACTGATATATAACACAGAACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGTGTCCACCCCTTCTCTAGGTAGTATGATAAGAACTTATTCCGTCTGACACAACTTTTCATGCTACAGCCCGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATGGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCACACATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAACAACAAAAAGAAGGGAAACGATTTGTTTTTCCCCCCTGACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAA ] [+] EMBL BX624678 [ GGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATACTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAACTTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTAT AAAATACT ] [+] EMBL BX603754 [ CAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGA A AGATAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATAC ] [+] EMBL BX623789 [ AGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAGCAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAACGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTCCCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATACTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAACTTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTATAAAAATACTCCATCTTTTCTCGTGCGGGCAGATGCAGTCGTCGAGCAGAAGGAAAAGCAAGAGAGATTGTTGAAAGAGTAG] consensusID : consensus_8926#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 744 fasta sequence [CGAGGTTAATCTTTGAAGCTGAACAACACTAATAACAATAATAACAACATTTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGCGCTGGAAGCTTTCCCTCCACGGTAGCTTACTACTTAATTTAACTTTAATTATCACCGGGTTACACTANACAGCACATCGCTTTATTCGTTGCATTGCTCGGGGCTTGTCGTACGTGAGGGAAGAACACGGATACTATACTATAGTCTGTNATGTNGTAGTACTTCGCTTNCTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGCGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGACCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTCTCGTACAAACGATCAAATAGGACCACCGGCAACAAGCTGTGTGGTTCGCGCGTAACCAGAGAGCACTGGAAACTGTTTAGTGATATAGNAAAAGTAGAACAAAATCNAGAATAGTAAATGCCGACCAGCATTNGCCGNTGAATATTTCAGAGAATGTTGGNCGNCGTCGCGTGCGCGGTTTTATCTTCATCNTCGTATTAATCCTCATGTTTCCATGTTATCACAAGTTCGCN] [+] EMBL AL931577 [CGAGGTTAATCTTTGAAGCTGAACAACACTAATAACAATAATAACAACATTTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAGCAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGAGCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGCGCTGGAAGCTTTCCCTCCACGGTAGCTTACTACTTAATTTAACTTTAATTATCACCGGGTTACACTANACAGCACATCGCTTTATTCGTTGCATTGCTCGGGGCTTGTCGTACGTGAGGGAAGAACACGGATACTATACTATAGTCTGTNATGTNGTAGTACTTCGCTTNCTGCTGTTATGTCTATCATTGGTTGCGCATACACTGCTGTTATAGATGTGAGCGAAACGCCAACAGTATGGAAACGTTAATGATGTTACCTAGACCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAAAGGATTTCTCGTACAAACGATCAAATAGGACCACCGGCAACAAGCTGTGTGGTTCGCGCGTAACCAGAGAGCACTGGAAACTGTTTAGTGATATAGNAAAAGTAGAACAAAATCNAGAATAGTAAATGCCGACCAGCATTNGCCGNTGAATATTTCAGAGAATGTTGGNCGNCGTCGCGTGCGCGGTTTTATCTTCATCNTCGTATTAATCCTCATGTTTCCATGTTATCACAAGTTCGCN] consensusID : consensus_8926#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence [CAGTATGTAACGTTAACGTTGTTAACCAGCCACCGAGCAAGTGTTGACATGAGGAAAAACCTTTTCGGATTTTTCGTACAAATGATCAAATAGGAGCCCTGCAACAAGGTGTGTGGTTCGTTCGTAACAGAGAGAACTGGAAACTGTTTGTGATATTGTTTTTCATTTTTTTTTAAATCAGTTAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGCGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTGTCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGTTTTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACATGGTACCGACGAAATGTGGTTTGGTGTAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGTTAGATACTTTAACAACT] [+] EMBL BX626964 [CAGTATGTAACGTTAACGTTGTTAACCAGCCACCGAGCAAGTGTTGACATGAGGAAAAACCTTTTCGGATTTTTCGTACAAATGATCAAATAGGAGCCCTGCAACAAGGTGTGTGGTTCGTTCGTAACAGAGAGAACTGGAAACTGTTTGTGATATTGTTTTTCATTTTTTTTTAAATCAGTTAGTAATGCCGTCAGCCATTGCCCGTTGATTTTCGCGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTGTCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGTTTTTTGTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACATGGTACCGACGAAATGTGGTTTGGTGTAACAAGACAGAGAGAGAGAGAGAGAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGTTAGATACTTTAACAACT] consensusID : consensus_8926#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence [GAATCCCGAGGTAAGCATGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTCCGTCGGCGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAAAGATACGAGAGAGAGAGCGTTGCGTTAGACCGCTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATAGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTAGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCGTTACCTTCGGCCAGCGGTCCACCCCTTACTNAGGTAAGCTATG] [+] EMBL AL933668 [GAATCCCGAGGTAAGCATGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGCGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGTTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTCCGTCGGCGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAAAGATACGAGAGAGAGAGCGTTGCGTTAGACCGCTAACAAAAGCTAGATACTTTAACAACTTCTCAAGTCCAGTGCAGCATTATAGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTAGGGCACTGATATATAATACAGCACAGAAGTAATAGTTCGCTGCGTTACCTTCGGCCAGCGGTCCACCCCTTACTNAGGTAAGCTATG] consensusID : consensus_8926#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence [AGGCCAGAACTCGGCACGTAGGCTTTAACAACTTCTCAAGTCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGGTTCGCTGCTTTTCTTTCGCAGCGGTCANCCCTTCTTTAGGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGGCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGAGTCTAAAACATCGATAGGCCAAGCGTCTTCCCTTAGAGCTTTACTTATTGCGGAGCAGCAGAAGAGAACGT] [+] EMBL BX468369 [AGGCCAGAACTCGGCACGTAGGCTTTAACAACTTCTCAAGTCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGGTTCGCTGCTTTTCTTTCGCAGCGGTCANCCCTTCTTTAGGGTAGTATGGTAAGAACTTATTCCGTCTGACACAACTTTTCATGCTGCAGGCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGAGTCTAAAACATCGATAGGCCAAGCGTCTTCCCTTAGAGCTTTACTTATTGCGGAGCAGCAGAAGAGAACGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CCGAAGGACGTGTGCATGCTCACCGCCCGCCGGTTCTGGATCACCAACATCGACGGGCCG 60 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 GCCGGCGTACTGAGGACGAAGGCGGTGCTGCTGCAGCACCTGCACCTGCAGCAGAAGCAG 120 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CAAGGCCATGCGCAACCGCCGGCTTCGTCCAGTGCCGGCGATGAGACGGATCTAGCCGGC 180 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 AACGGGGGCAAAGGCGGCGGCGCGGTGGAACCGAAAGCTACGCAGCTACCGAACAATCTC 240 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 GACAGTGCGGCACAACCAAACAACAACACCGGCAGCAACCGTACGCCGGAACGAAAGCCC 300 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 GTCAAGTGTAACAACATCATCGGCGCGGACGTGGACGTGGCCAGCTTGAAGCGTAAATCG 360 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ---------------------------------CGAGGTTAATCTTTGAAGCTGAACAAC 27 consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 TTCGGCAACATTAACGCGACGCTGCCGAAAAGTGTGAACGAATCTTTGAAGCTGAACAAC 420 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ACTAATAACAATAATAACAACATTTAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAG 87 consensus_8926#2 -----------------CAGTATGTAACG-TTAACGTTGTTAACCAGCCACCG-AGCAAG 41 consensus_8926#0 AATAATAACAATAATAACAACAT-TAACAACTACCATCTGCCTTCGGCCGCCGCGGTAAG 479 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 CAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGT-AGA 146 consensus_8926#2 TGTTGACATGAGGAAAAACCTTTTCGGATTTTTCG----TACAAATGATCAAATA--GGA 95 consensus_8926#0 CAATGGGACTGGGAGTGAGGCGAGTGGACCAAAGGACAACACCAAGAAGGAGGTGTAGGA 539 consensus_8926#3 -----GAATCCCGAGGTAAGCATGCCCGTTGATTTTCGTGAATGTTGGCCGTTCGTTCGC 55 consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 GCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATATGCGCGCTGGAAGC 206 consensus_8926#2 GCCCTGCAACAAGGTGT----GTGGTTCGTTCGTAA------CAGA-GAGAACTGGAAAC 144 consensus_8926#0 GCACTTTACTTTAGCGATGAAGAGGCTTTTCTGAAAGCTTCCTATA--TGCGGTGGAAGC 597 consensus_8926#3 GTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAGT 115 consensus_8926#4 -------------------------------------------------AGGCCAGAACT 11 * consensus_8926#1 TTTCCCTCCACGGTAGCTTACTACTTAATTTAACTTTAATTATCACCGGGTTACACTANA 266 consensus_8926#2 TGTTT-------GTGATATTGTTTTTCATTTTTTTTTAA--ATCAGTTAGTAATGCCGT- 194 consensus_8926#0 TTTCCCTCCACGGTAGT-TACTA-TTAATTTAA-TTTAATTATCAG-GGGTTACACTAAA 653 consensus_8926#3 TCGCTCTTATTTATTGTCA-TTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTCCGTCG 174 consensus_8926#4 CGGCACGTAGGCTTTAACAACTTCTCAAGTCAGTGCA---GCATTATTGGGTATGAATTA 68 * * * consensus_8926#1 CAGCACATCGCTTTATTCGTTGCATTGCTCGGG-GCTTGTCGTACGTGAGGGAAGAACAC 325 consensus_8926#2 CAGC------CATTGCCCGTTGATTTTCGCGAATGTTGGCCGTTCGTT---------CGC 239 consensus_8926#0 GACATC----GTTTATTCGTTGCATTGCTCGGG-GCTTGTCGTA-GTGAGGGAAGA-AAC 706 consensus_8926#3 GCGTTTT--AGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGG--CA 230 consensus_8926#4 AGGCAAA--ATGGGAAGCTATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGA--TT 124 * consensus_8926#1 GGATACTATACTATAGTCTGTNATGTNGTAGTACTT-CGCTTNCTGCTGTTATGTCTATC 384 consensus_8926#2 GTGCGCGGTTTTATCTTCATCCTCGTAGTTAAAT-----CCTCATGTTTCCATGT-TGTC 293 consensus_8926#0 GGATACTATACTATAGTCTGTAATGTTGT-GTACT----TCGTTTGCTGTTATGTCTATC 761 consensus_8926#3 AACAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAA--AGA 288 consensus_8926#4 GGGCACTGATATAT--AATACAGCACAGAAGTAATA-GGTTCGCTGCTTTTCTTT--CGC 179 * ** * * ** consensus_8926#1 ATTGGTT-GCGCATACACTGCTGTTATAGATGTGAGCGAAACGCCAACAGTATGGAAACG 443 consensus_8926#2 ACCAGTTCGCTCTTAT-TTATTGTCAT-----TCCGCAGGTTGATTTAAGTGTGGAAGTG 347 consensus_8926#0 ATTGGTT-GCGCATACACTGCTGTTATAGATGTGAG-GAAACGCCAACAGTATGGAAACG 819 consensus_8926#3 TACGAGA-GAGAGAGCGTTGCGTTAGAC----CGCTAACAAAAGCTAGATACTTTAACAA 343 consensus_8926#4 AGCGGTC-ANCCCTTCTTTAGGGTAGTA----TGGTAAGAACTTATTCCGTCTGACACAA 234 * * * * consensus_8926#1 TTAATGATGTTACCTAGACCACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAA 503 consensus_8926#2 TTTTTTGTTTGTTTTAGG--ATTAAATATGTATT-ACTTTTACATCTACTTGCGTCCGCT 404 consensus_8926#0 TTAATGATGTTACCTAGCC-ACCGCGCAAGTGTTGACACGAGGAAAATCCTATTCCCGAA 878 consensus_8926#3 CTTCTCAAGTC---CAG--TGCAGCATTATAGGGTATGAATTAAGGCAAAATGGGAAGCT 398 consensus_8926#4 CTTTTCATGCTG--CAGGCTGTTGCACCATCAGTAATTCGGTAATGCGTAATGTGAGTCT 292 * * ** * * consensus_8926#1 AGGATTTCTCGTACAAACGATCAAATAGGACCACCG-GCAACAAGCTGTGTGGTTCGCGC 562 consensus_8926#2 AGAGGCAAACAACTAAGAAATCAAACATGGT-ACCG-ACGAAA-----TGTGGTTTG-GT 456 consensus_8926#0 AGGATTTTTCGTACAAACGATCAAATAGGACCACCGCGCAACAAGCTGTGTGGTTCGTGC 938 consensus_8926#3 ATCAACCGGTGTAATACTAGTCGAGAGTCGAGTGCGATTAGGGCACTGATATATAATACA 458 consensus_8926#4 A--AAACATCG----ATAGGCCAAGCGTC---TTCCCTTAGAGC-TTTACTTATTGCGGA 342 * * * * * * consensus_8926#1 GTAACCAGAGAGCACTGGAAACTGTTTAGTGATATAGNAAAAGTAGAACAAAATCNAGAA 622 consensus_8926#2 GTAACAAGACAGAGAGAGAGA-------GAGAGAGAGAGAGCGTTGCGTTAGACCG---T 506 consensus_8926#0 GTAAC-AGAGAGCACTGGAAACTGTTT-GTGATATTGT---TTTGTTTTTTAATCA--GA 991 consensus_8926#3 GCA-CAGAAGTAATAGTTCGCTGCGTTACCTTCGGCCAGCGGTCCACCCCTTACTNAGGT 517 consensus_8926#4 GCAGCAGAAGAGAACGT------------------------------------------- 359 * * * * consensus_8926#1 TAGTAAATGCCGACCAGCATTNGCCGNTGAATATTTCAGAGAATGTTGGNCGNCG--TCG 680 consensus_8926#2 TAACAAAAGTTAGATA-CTTTAACAACT-------------------------------- 533 consensus_8926#0 TAGTAA-TGCCGTCAGCCATTGCCCGTTGA---TTTTCGTGAATGTTGGCCGTTCGTTCG 1047 consensus_8926#3 AAGCTATG---------------------------------------------------- 525 consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 CGTGCGCGGTTTTATCTTCATCNTCGTATT--AATCCTCATGTTTCCATGTTATCACAAG 738 consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CGTGCGCGGTTTTATCTTCATCCTCGTAGTTAAATCCTCATGTTTCCATGTTATCACCAG 1107 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 TTCGCN------------------------------------------------------ 744 consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 TTCGCTCTTATTTATTGTCATTCCGCAGGTTGATTTAAGTGTGGAAGTGCTTTTTTGTTT 1167 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 GTTTGTTTTAGGATTAAATATGTATTACTTTTACATCTACTTGCGTCCGCTAGAGGCAAA 1227 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CAACTAAGAAATCAAACGTAGTACCGACGAAATGTGGTTTGGTGTAACAAGAAAGATAGA 1287 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 GAGAGAGAGCGTTGCGTTAGACCGTTAACAAAAGCTAGATACTTTAACAACTTCTCAAGT 1347 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CCAGTGCAGCATTATTGGGTATGAATTAAGGCAAAATGGGAAGCTATCAACCGGTGTAAT 1407 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 ACTAGTCGAGAGTCGAGTGCGATTGGGCACTGATATATAATACAGCACAGAAGTAATAGT 1467 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 TCGCTGCTTTTCTTTCGCAGCGTCCACCCCTTCTTTAGGTAGTATGGTAAGAACTTATTC 1527 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CGTCTGACACAACTTTTCATGCTGCAGCCTGTTGCACCATCAGTAATTCGGTAATGCGTA 1587 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 ATGTGATCTAAAACATCGATAGCCAAGCTCTTCCCTTAGGCTTTACTTATTGCGGAGCAG 1647 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CAGAAGGAAACGTTTAGAAATTTCCGCTCATTTCCGATTTAAGCAGAGGCTGAACCAGAA 1707 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CGATGCCAAAATTGTAATTTACAAACGAAAAACAAAAAGAAGGGAAACGATTTGTTTTTC 1767 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CCTCCTAACTCTTCCTTGCTCATTTACACAGATTCCAACTTCTGCTAAAACTTATTCATA 1827 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 CTTTACTTACCGTGAATGAATTCAGCAAACGCACACGCGCACACACCCGCACCACACAAC 1887 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 TTACGAAAGCAATAGGAGCTTGTAATGGCACTTCAGGAATCAGGAATAGTATACCTTTTA 1947 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 ------------------------------------------------------------ consensus_8926#2 ------------------------------------------------------------ consensus_8926#0 TAAAATACTCCATCTTTTCTCGTGCGGGCAGATGCAGTCGTCGAGCAGAAGGAAAAGCAA 2007 consensus_8926#3 ------------------------------------------------------------ consensus_8926#4 ------------------------------------------------------------ consensus_8926#1 --------------------- consensus_8926#2 --------------------- consensus_8926#0 GAGAGATTGTTGAAAGAGTAG 2028 consensus_8926#3 --------------------- consensus_8926#4 --------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||