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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8931#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1370 fasta sequence
[CCGCGGACGCGTGGGTACGCGACACGTAAAGCGTATCTTAACCGACTAACTTTGCTTACTTTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCCTTGCTCTTTCAATGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAATACAAAGCGCGTCTATAACCTGCATCACTAAGCCAGAGCACTGCATCGAAACGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCAT-GTTACGATGACTCTATGGCCGTTCTGCTCTGTTGTATCAACCGGTGACGTCTCAGTGGTGTAGAGTAACATGGTCGATG-TTTGA-CGCTGTTCAGCAAACG-ATGTATGTGTGCGACCCCAGTTCAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTTATGCGTGCGATCGT-GTGTACTATTGAAAGACATTCGTAAGTGCGTGAAATTATTGTGCATGT-GTGTATGATGA-GTGTTTAC-TTTAAGAAGTGGCGCACAG-TGCAGAAAGCAGAAAACATGAATCCATTATATTTTCCTCG-CGGCGTATATTAGATCAGATTGCTAAGATGCAATAGTTGGTTCGTTCTCTTACTCTACAAAGCATTCACAACAAGGTTGAGGTACGAATATCTTAGATCTTATCAAACCAGACGCGCGCTGCATAAATTAGGAAAGATAAACACTCATTCTTACGGTCAGGACGAATAAGTTTTCCAGATACGATGGCTAAGTCTGGAACGTTTAGTTGCATGTGTTTACACCATAATCTAGATTTTAATCGACTAGTTTAAACAAAATTGATAACGGCTAACGGCTGATTGACAACATTTCAAGATGCAAACGGATATAATATGTGTGGAGAAATACAACTGATTGCAAAGTAAGTTTGCAATTATTTTAGACACACTTTATTTAAGACACAGTTGAATTTGTTTTTTAAACCATTCTCATTTTCACGCAGTTTGACAATGTTTGTCTCTAAAACACCTTCTGAAAATAGCTTTTTTTCTTTATAATAACTGAAGCTAATGATTGTAGTTCAGTTATTTATTCAGTGAAGCAGCATGGGCTTAC-TTTG-TTCGC-TG-TNAGAC-NTTTGCC-TACGGCCTTTCAATTATGATTTGCTACCAGGATCACAGTACTCACAGTGTCAGTAATTATTTGTAAATTATTAATTATTTAATATCTCTATATTCATGCCTTCTTCTGGTCACTCCTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTG]
[+] EMBL BM613921 [CCGCGGACGCGTGGGTACGCGACACGTAAAGCGTATCTTAACCGACTAACTTTGCTTACTTTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCCTTGCTCTTTCAATGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAATACAAAGCGCGTCTATAACCTGCATCACTAAGCCAGAGCACTGCATCGAAACGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCAT GTTACGATGACTCTATGGCCGTTCTGCTCTGTTGTATCAACCGGTGACGTCTCAGTGGTGTAGAGTAACATGGTCGATG TTTGA CGCTGTTCAGCAAACG ATGTATGTGTGCGACCCCAGTTCAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTTATGCGTGCGATCGT GTGTACTATTGAAAGACATTCGTAAGTGCGTGAAATTATTGTGCATGT GTGTATGATGA GTGTTTACTTTTAAGAAGTGGCGCACA ]
[+] EMBL BX620639 [ GAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAACACAAAGCGCGTCTATAACCTGCATCACCAAGCCAGAGCACTGCATCGAAATGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCAT GTTACGATGACTCTATGGCCGTTCTGCTCTGTTGTATCAACCGGTGACGTCTCAGTGGTGTAGAGTAACATGGTCGATG TTTGA CGCTGTTCAGCAAACG ATGTATGTGTGCGACCCCAGTTCAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTTATGCGTGCGATCGT GTGTACTATTGAAAGACATTCGTAAGTGCGTGAAATTATTGTGCATGT GTGTATGATGA GTGTTTAC TTTAAGAAGTGGCGCACAG TGCAGAAAGCAGAAAACATGAATCCATTATATTTTCCTCG CGGCGAATATTAGATCAGATTGCTAAGATGCAATAGTTGGTTCGTTCTCTTACTCTACAAAGCATTCACAACGAGGTTGAGGTACGAATATCTTAGATCTTATCAAACCAGACGCGCGCTGCATAAATTAGGAAAGATAAACACTCATTCTTACNGTCAGGACGAATAAGTTTTCCAGATACGATGGCTAAGTCTGGAACGTTT ]
[+] EMBL AL695226 [ ccgaggtTTTTGAACACTA CACTAACATGGTTACGATGACTCTATGGCCG TC GCTCTGTTGTATCAACCGGTGACGTCTCAGTGGTGTA AGTAACATGGTCGATGTTTTGACCGCTGTTCAGCAAACGAATGTATGTGTGCGAACCCAGTTCAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTTATGCGTGCGATCGTGGTGTACTATTGAAAGACATTCGTAAGTGCGTGAAATTATTGTGCATGTGGTGTATGATGAGGTGTTTAC TTTAAGAAGTGGCGCACAGCTGCAGAAAG NGAAAACATGNATCCATTATA TTTCCTCG CGGCGgta ]
[+] EMBL BX616245 [ CCCAGTTCAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTTATGCGTGCGATCGT GTGTACTATTGAAAAACATTCATAAGTGCGTGAAATTATTGTGCATGT GTGTTTGATGA GTGTTTAC TTTAAGAAGTGGCGCACAG TGCAGAAAGCAGAAAACATGAATCCATTATATTTTCCTCG CGGCGTATATTAGATCAGAT ]
[+] EMBL BX619219 [ CATGAATCCATTATATTTTCCTCGNCGGCGTATATTAGATCAGATTGCTAAGATGCAATAGTTGGTTCGTTCTCTTACTCTACAAAGCATTCACAACAAGGTTGAGGTACGAATATCTTAGATCTTATCAAACCAGACGCGCGCTGCATAAATTAGGAAAGATAAACACTCATTCTTACGGTCAGGACGAATAAGTTTTCCAGATACGATGGCTAAGTCTGGAACGTTTAGTTGCATGTGTTTACACCATAATCTAGATTTTAATCGACTAGTTTAAACAAAATTGATAACGGCTAACGGCTGATTGACAACATTTCAAGATGCAAACGGATATAATATGTGTGGAGAAATACAACTGATTGCAAAGTAAGTTTGCAATTATTTTAGACACACTTTATTTAAGACACAGTTGAATTTGTTTTTTAAACCATTCTCATTTTCACGCAGTTTGACAATGTTTGTCTCTAAAACACCTTCTGAAAATAGCTTTTTTTCTTTATAATAACTGAAGCTAATGATTGTAGTTCAGTTATTTATTCAGTGAAGCAGCATGGGCTTAC TTTG TTCGC TG TNAGAC NTTTGCC TACGG ]
[+] EMBL BX611451 [ ACTCTACAAAGCATTCACAACAAGGTTGAGGTACGAATTTTTTACATCTTATCAAACCAGACGCGCGCTGCATAAATTAGGAAAGATAGACACTCATTCTTACGGTCAGGACGAATAAGTTTTCCAGATACGATGGCTAAGTCTGGAACGTTTAGTTGCATGTGTTTACACCATAATCTAGATTTTAATCGACTAGTTTAAACATAATTGATAACGGCTAACGGCTGATTGACAACATTTCAAGATGCAAACGGATATAATATGTGTGGAGAAATACAACTGATTGCAAAGTAAGTTTGCAATTATTTTAGACACACTTTATTTAAGACACAGTTGAATTTGTTTTTTAAACCATTCTCATTTTCACGCAGTTTGACAATGTTTGTCTCTAAAACACCTTCTGAAAATAGCTTTTTTTCTTTATAATAACTGAAGCTAATGATT TAGTTCAGTTATTTATTCAGTGAAGCAGCATTGGCTTACTTTTGTTTCGCTTGTTAAGACATTTTGCCTTACGGCCTTTCAATTATGATTTGCTACCAGGATCACAGTACTCACAGTGTCAGTAATTATTTGTAAATTATTAATTATTTAATATCTCTATATTCATGCCTTCTTCTGGTCACTCCTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTG]
consensusID : consensus_8931#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1146 fasta sequence
[CCGATGGAACGGTCCCACCGTTCGCGAAGCGCCCGTTCGAGGAGGGTGGCGGAGAGTATCGGCGCGTGCCGGAGTACGAGTATCCGGATGGTGCGCCGCCGTATGATGATGGAGCGCCTGGGTATGGGGGCGGCGGCTACGGTGCCCGTTCGTTCCGCGGTCGGGGCAGTGGTGGAAGTGGAAGTGGCTATCGGGGACGCGGTGGTGGCAGCTTCCGCGGTGGTTTCCACCACGATGGGCACCGTCCGGCCGGAGCTGGCGGACCGCCGCATCACGGACCGGGTGGCGAGGAGGAGTGGCGACGTCCACCGGGCGGCGGCGGTGGTGAGCCGGGCGAATATGATCAACGCCGTCGGTCCGGCTCACGCGAGCCGGGCGGTATCGATCGGTCCCGGTCGCGCTCACCACGCAGACGCAGCCCGGCGGATTCGGATTCCGACTCGTCGACACGCCGCAATGGTGTGCTGACGTCGGCCCGCACACTTTCCGAGGTGGCGCGCAAATCGAGCACCGTCTGGCAGGGCGCACTGATCCTGAAGAGTTCCCTTTTCCCGGCCAAATTCCATCTCACCGATGGCGATGCCGATATCGTCGACGGGCTAATGAAAGCACGAGGATGGCAAGCACCATTTGCGCATCACGCAACGTTTGCGCCTCGATCAGCCGAAGCTGGAGGATGTGCAGAAAAGAATTTCCACCTCGTCGTCGCATGCCATCTTCCTCGGGCTGCCGGGCTCGAACCCGGCCGTGTCGTCATCGGACGATGCAAGCGTACAGACTCGCCCGCTGCGCAATCTGGTAACCTACCTGAAGCAGAAGGAAGCCGCCGGGGTAATTTCGCTCTTGAACAAGGAAACGGAAGCGACCGGCGTGCTGTACACGTTCCCGCCGTGTGAATTCTCCACCGAGCTGCGGGGCGGGACTGCCTAGGAGCGGGAGGAAGAGGCCGATGATCGGGAGCTAGAGGTACGGAAGAAGAAAAGTAAGAAGCCAGCAAGTAAAACTAGCAAGTCGGATAAACCATCATCATCTACCGACTAAAATGCAAACGACGGGCAGACCTCTGAATTCATCGGTGACGAGACTACTCTACTTTGATTGTGGAAGTAGATTGGAATACTTTTATTCATTGCGATCGTCTGGTGC]
[+] EMBL BM576446 [CCGATGGAACGGTCCCACCGTTCGCGAAGCGCCCGTTCGAGGAGGGTGGCGGAGAGTATCGGCGCGTGCCGGAGTACGAGTATCCGGATGGTGCGCCGCCGTATGATGATGGAGCGCCTGGGTATGGGGGCGGCGGCTACGGTGCCCGTTCGTTCCGCGGTCGGGGCAGTGGTGGAAGTGGAAGTGGCTATCGGGGACGCGGTGGTGGCAGCTTCCGCGGTGGTTTCCACCACGATGGGCACCGTCCGGCCGGAGCTGGCGGACCGCCGCATCACGGACCGGGTGGCGAGGAGGAGTGGCGACGTCCACCGGGCGGCGGCGGTGGTGAGCCGGGCGAATATGATCAACGCCGTCGGTCCGGCTCACGCGAGCCGGGCGGTATCGATCGGTCCCGGTCGCGCTCACCACGCAGACGCAGCCCGGCGGATTCGGATTCCGACTCGTCGACACGCCGCAATGGTGTGCTGACGTCGGCCCGCACACTTTCCGAGGTGGCGCGCAAATCGAGCACCGTCTGGCAGGGCGCACTGATCCTGAAGAGTTCCCTTTTCCCGGCCAAATTCCATCTCACCGATGGCGATGCCGATATCGTCGACGGGCTAATGAAAGCACGAGGATGGCAAGCACCATTTGCGCATCACGCAACG ]
[+] EMBL BM612294 [ ccgCGCACACTTTCCGAGGTGGCGCGCAAATCGAGCACCGTCTGGCAGGGCGCACTGATCCTGAAGAGTTCCCTTTTCCCGGCCAAATTCCATCTCACCGATGGCGATGCCGATATCGTCGACGGGCTAATG AAGGACGAGGATGGCAAGCACCATTTGCGCATCACGCAACGTTTGCGCCTCGATCAGCCGAAGCTGGAGGATGTGCAGAAAAGAATTTCCACCTCGTCGTCGCATGCCATCTTCCTCGGGCTGCCGGGCTCGAACCCGGCCGTGTCGTCATCGGACGATGCAAGCGTACAGACTCGCCCGCTGCGCAATCTGGTAACCTACCTGAAGCAGAAGGAAGCCGCCGGGGTAATTTCGCTCTTGAACAAGGAAACGGAAGCGACCGGCGTGCTGTACACGTTCCCGCCGTGTGAATTCTCCACCGAGCTGCGGGGCGGGACTGCCTAGGAGCGGGAGGAAGAGGCCGATGATCGGGAGCTAGAGGTACGGAAGAAGAAAAGTAAGAAGCCAGCAAGTAAAACTAGCAAGTCGGATAAACCATCATCATCTACCGACTAAAATGCAAACGACGGGCAGACCTCTGAATTCATCGGTGACGAGACTACTCTACTTTGATTGTGGAAGTAGATTGGAATACTTTTATTCATTGCGATCGTCTGGTGC]
consensusID : consensus_8931#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 726 fasta sequence
[CCGCCCACGCGTCCGCACGCTGACGGAGGAGGGACTTAAGGAGGATCACCTAGTGATCGTGGTAGTGCGGGGCGGGACTGCCTAGGAGCGGGAGGAAGAGGCCGATGATCGGGAGCTAGAGGTACGGAAGAAGAAAAGTAAGAAGTCAGCAAGTAAAACTAGCAAGTCGGATAAACCATCATCATCTACCGACTAAAATGCAAACGACGGGCAGACCTCTGAATTCATCGGTGACGAGACTACTCTACTTTGATTGTGGAAGTAGATTGGAATACTTTTATTCATTGCGATCGTCTGGTGCGTTTGTGGATGCTTTCGCAAAAGAGGTATCATCAGTAAGCTTCAGAGGCGATTGGGTTCATCATCCGTTTGGCTACGCGACACGTAAAGCGTATCTTAACCAATTAA-----CTTACTTTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCCTTGCTCTTTCAATGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAATACAAAGCGCGTCTATAACCTGCATCACTAAGCCAGAGCACTGCATCGAAACGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCATGTTACGATGACT]
[+] EMBL BM587835 [CCGCCCACGCGTCCGCACGCTGACGGAGGAGGGACTTAAGGAGGATCACCTAGTGATCGTGGTAGTGCGGGGCGGGACTGCCTAGGAGCGGGAGGAAGAGGCCGATGATCGGGAGCTAGAGGTACGGAAGAAGAAAAGTAAGAAGTCAGCAAGTAAAACTAGCAAGTCGGATAAACCATCATCATCTACCGACTAAAATGCAAACGACGGGCAGACCTCTGAATTCATCGGTGACGAGACTACTCTACTTTGATTGTGGAAGTAGATTGGAATACTTTTATTCATTGCGATCGTCTGGTGCGTTTGTGGATGCTTTCGCAAAAGAGGTATCATCAGTAAGCTTCAGAGGCGATTGGGTTCATCATCCGTTTGGCTACGCGACACGTAAAGCGTATCTTAACCAATTAA CTTACTTTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCCTTGCTCTTTCAATGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAATACAAAGCGCGTCTATAACCTGCATCACTAAGCCAGAGCACTGCATCGAAACGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCC ]
[+] EMBL BM594760 [ ccgGGCCGATGATCGGGAGCTAGAGGTACGGAAGAAGAAAAGTAAGAAGCCAGCAAGTAAAACTAGCAAGTCGGATAAACCATCATCATCTACCGACTAAAACGCAAACGACGGCCAGACCTCTGAATTCATCGGTGACGAGACTACTCTACTTTGATTGTGGAAGTAGATTGGAATACTTTTATTCATTGCGATCGTCTGGTGCGTTTGTGGATGCTTTCGCAAGAGAGGTATCATCAGTAAGCTTCAGAGGCGATTGGGTTCATCATCCGTTTGGCTACGCGACACGTAAAGCGTATCTTAACCGACTAACTTTGCTTACTTTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCCTTGCTCTTTCAATGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAATACAAAGCGCGTCTATAACCTGCATCACTAAGCCAGAGCACTGCATCGAAACGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCATGTTACGATGACT]
consensusID : consensus_8931#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 653 fasta sequence
[GATCGCCCGAGGNTTGGAATACTTTTATTCATTGCGATCGTCTGGTGCGTTGTGGATGCTTTCGCAAGAGAGGTATCATCAGTAAGCTTCAGAGGCGATGGGTTCATCATCCGTTTGGCTACGCGACACGTAAAGCGTATCTTAACCAATTAACTTTGCTTACTTTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCATTGCTCTTTCAATGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAATACAAAGCGCGTCTATAACCTGCATCACCAAGCCAGAGCACTGCATCGAAACGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCATGTTACGATGACTCTATGGCCGTTCTGCTCTGTTGTATCAACCGGTGACGTCTCAGTGGTGTAGAGTAACATGGTCGATGTTTGACGCTGTTCAGCAAACGATGTATGTGTGCGACCCCAGTTTAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTCNATGCGTGCGATCGTGTGTACTATNGANCAGA]
[+] EMBL AL931934 [GATCGCCCGAGGNTTGGAATACTTTTATTCATTGCGATCGTCTGGTGCGTTGTGGATGCTTTCGCAAGAGAGGTATCATCAGTAAGCTTCAGAGGCGATGGGTTCATCATCCGTTTGGCTACGCGACACGTAAAGCGTATCTTAACCAATTAACTTTGCTTACTTTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCATTGCTCTTTCAATGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCATCATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAATGGAATACAAAGCGCGTCTATAACCTGCATCACCAAGCCAGAGCACTGCATCGAAACGTCTAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCATGTTACGATGACTCTATGGCCGTTCTGCTCTGTTGTATCAACCGGTGACGTCTCAGTGGTGTAGAGTAACATGGTCGATGTTTGACGCTGTTCAGCAAACGATGTATGTGTGCGACCCCAGTTTAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTCNATGCGTGCGATCGTGTGTACTATNGANCAGA]
consensusID : consensus_8931#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence
[CCGGCCGGAATAAGGAAAAGGCAACGATGAAGTGCAGTGAACAAAATGATGGTAATAGTTTGCATGGAAGTTAATGTGTATACAAGAGAGCAGCTGCGTTCATTGCTTTGAATTTAAAAAGCTTAAAACAATATGAAACAAACGAATGAATCCAGTTCATTTTGCCCAGATAAGCTTACTTATGAAAAAAAAACACATTCTGAAATAATTGCATCATATATAGATAATCGATCACATCAATTCACATCGAAAAGGTGTCGAATATAAAATATATCTCTCAGCCCTGTTTAATCTATATGTGAGCAAGATGACACAGATGACAGTTGCATACGCAGTACAGTATATAACAAAGTAGGAAATCGATACATACAATACATTAATGATAGCGCAGTAAGCAATGCCGGAATAAGGAAAAGGCAACGATGAAGTGCAGTGAACAAAATGATGGTAATAGTTTGCGGCCTTTCAATTATGATTTGCTACCAGGATCACAGTACTCACAGTGTCAGTAATTATTTGTAAATTATTAATTATTTAATATCTCTATATTCATGCCTTCTTCTGGTCACTCCTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTGCTTTGAATTTAAAAAGCTTAAAGCAATATGAAACAAACGAA]
[+] EMBL BM611317 [CCGGCCGGAATAAGGAAAAGGCAACGATGAAGTGCAGTGAACAAAATGATGGTAATAGTTTGCATGGAAGTTAATGTGTATACAAGAGAGCAGCTGCGTTCATTGCTTTGAATTTAAAAAGCTTAAAACAATATGAAACAAACGAATGAATCCAGTTCATTTTGCCCAGATAAGCTTACTTATGAAAAAAAAACACATTCTGAAATAATTGCATCATATATAGATAATCGATCACATCAATTCACATCGAAAAGGTGTCGAATATAAAATATATCTCTCAGCCCTGTTTAATCTATATGTGAGCAAGATGACACAGATGACAGTTGCATACGCAGTACAGTATATAACAAAGTAGGAAATCGATACATACAATACATTAATGATAGCGCAGTAAGCAATGCCGGAATAAGGAAAAGGCAACGATGAAGTGCAGTGAACAAAATGATGGTAATAGTTTGCGGCCTTTCAATTATGATTTGCTACCAGGATCACAGTACTCACAGTGTCAGTAATTATTTGTAAATTATTAATTATTTAATATCTCTATATTCATGCCTTCTTCTGGTCACTCCTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTGCTTTGAATTTAAAAAGCTTAAAGCAATATGAAACAAACGAA]
consensusID : consensus_8931#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 621 fasta sequence
[CCGCCCACGCGTCCGGGAAAGATAAACACTCATTCTTACGGTCAGGACGAATAAGTTTTCCAGATACGATGGCTAAGTCTGGAACGTTTAGTTGCATGTGTTTACACCATAATCTAGATTTTAATAGACTAGTTTAAACAAAATTGATAACGGCTAACGGCTGATTGACAACATTTCAAGATGCAAACGGATATAATATGTGTGGAGAAATACAACTGATTGCAAAGTAAGTTTGCAATTATTTTAGACACACTTTATTTAAGACACAGTTGAATTTGTTTTTAAACCATTCTCATTTTCACGCAGTTTGACAATGTTTGTCTCTAAAACACCTTCTGAAAATAGCTTTTTTTCTTTATAATAACTGAAGCTAATGATTGTAGTTCAGTTATTTATTCAGTGAAGCAGCATTGGCTTACTTTTGTTTCGCTTGTTAAGACATTTTGCCTTACGGCCTTTCAATTATGATTTGCTACCAGGATCACAGTACTCACAGTGTCAGTAATTATTTGTAAATTATTAATTATTTAATATCTCTATATTCATGCCTTCTTCTGGTCACTCCTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTGCTTTGAATTTTAAAAAAG]
[+] EMBL BM604288 [CCGCCCACGCGTCCGGGAAAGATAAACACTCATTCTTACGGTCAGGACGAATAAGTTTTCCAGATACGATGGCTAAGTCTGGAACGTTTAGTTGCATGTGTTTACACCATAATCTAGATTTTAATAGACTAGTTTAAACAAAATTGATAACGGCTAACGGCTGATTGACAACATTTCAAGATGCAAACGGATATAATATGTGTGGAGAAATACAACTGATTGCAAAGTAAGTTTGCAATTATTTTAGACACACTTTATTTAAGACACAGTTGAATTTGTTTTTAAACCATTCTCATTTTCACGCAGTTTGACAATGTTTGTCTCTAAAACACCTTCTGAAAATAGCTTTTTTTCTTTATAATAACTGAAGCTAATGATTGTAGTTCAGTTATTTATTCAGTGAAGCAGCATTGGCTTACTTTTGTTTCGCTTGTTAAGACATTTTGCCTTACGGCCTTTCAATTATGATTTGCTACCAGGATCACAGTACTCACAGTGTCAGTAATTATTTGTAAATTATTAATTATTTAATATCTCTATATTCATGCCTTCTTCTGGTCACTCCTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTGCTTTGAATTTTAAAAAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8931#0 CCGCGGACGCGTGGGTACGCGACACGTAAAGCGTATCTTAACCGACTAACTTTGCTTACT 60
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ------------------------------------------------------------
consensus_8931#0 TTTAGTTCAAAACAAGGAGCACATACGTAAATGCACCATTTGCGCTCCTTGCTCTTTCAA 120
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ------------------------------------------------------------
consensus_8931#0 TGTGCATAGTAACCCTGTCTAGAAATGGCATACAAAAAATAACGAAACAATTTGTTCCAT 180
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ------------------------------------------------------------
consensus_8931#0 CATCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCAACGGGGAAAAT 240
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ------------------------------------------------------------
consensus_8931#0 GGAATACAAAGCGCGTCTATAACCTGCATCACTAAGCCAGAGCACTGCATCGAAACGTCT 300
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ------------------------------------------------------------
consensus_8931#0 AACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACTACCACTACCAT 360
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ------------------------------------------------------------
consensus_8931#0 GTTACGATGACTCTATGGCCGTTCTGCTCTGTTGTATCAACCGGTGACGTCTCAGTGGTG 420
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ------------------------------------------------------------
consensus_8931#0 TAGAGTAACATGGTCGATGTTTGACGCTGTTCAGCAAACGATGTATGTGTGCGACCCCAG 480
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ---------------------------------------------------------CCG 3
consensus_8931#0 TTCAGGAAAAGTGCGCGCGTGATCTTCCCATCTATTTATGCGTGCGATCGTGTGTACTAT 540
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ATGGAACGGTCCCACCGTTCGCGAAGCGCCCGTTCGAGGAGGGTGGCGGAGAGTATCGGC 63
consensus_8931#0 TGAAAGACATTCGTAAGTGCGTGAAATTATTGTGCATGTGTGTATGATGAGTGTTTACTT 600
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 GCGTGCCGGAGTACGAGTATCCGGATGGTGCGCCGCCGTATGATGATGGAGCGCCTGGGT 123
consensus_8931#0 TAAGAAGTGGCGCACAGTGCAGAAAGCAGAAAACATGAATCCATTATATTTTCCTCGCGG 660
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 --------------------------------------------CCGCCCACGCGTCCGC 16
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 ATGGGGGCGGCGGCTACGGTGCCCGTTCGTTCCGCGGTCGGGGCAGTGGTGGAAGTGGAA 183
consensus_8931#0 CGTATATTAGATCAGATTGCTAAGATGCAATAGTTGGTTCGTTCTCTTACTCTACAAAGC 720
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ACGCTGACGGAGGAGGGACTTAAGGAGGATCACCTAGTGATCGTGGTAGTGCGGGGCGGG 76
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 GTGGCTATCGGGGACGCGGTGGTGGCAGCTTCCGCGGTGGTTTCCACCACGATGGGCACC 243
consensus_8931#0 ATTCACAACAAGGTTGAGGTACGAATATCTTAGATCTTATCAAACCAGACGCGCGCTGCA 780
consensus_8931#5 ------------------------------------------------CCGCCCAC-GCG 11
consensus_8931#4 ------------------------------------------------CCGGCCGGAATA 12
consensus_8931#2 ACTGCCTAGGAGCGGGAGGAAGAGGCCGATGATCGGGAGCTAGAGGTACGGAAGAAGAAA 136
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 GTCCGGCCGGAGCTGGCGGACCGCCGCATCACGGACCGGGTGGCGAGGAGGAGTGGCGAC 303
consensus_8931#0 TAAATTAGGAAAGATAAACACTCATTCTTACGGTCAGGACGAATAAGTTTTCCAGATACG 840
consensus_8931#5 T---CCGGGAAAGATAAACACTCATTCTTACGGTCAGGACGAATAAGTTTTCCAGATACG 68
consensus_8931#4 A-----GGAAAAGGCAACGATGAAGTGCAGTGAACAAAATGA-TGGTAATAGTTTGCATG 66
consensus_8931#2 AGTAAGAAGTCAGCAAGTAAAACTAGCAAGTCGGATAAACCATCATCATCTACCGACTAA 196
consensus_8931#3 ------------------------------------------------------------
consensus_8931#1 GTCCACCGGGCGGCGGCGGTGGTGAGCCGGGCGAAT--ATGATCAACGCCGTCGGTCCGG 361
consensus_8931#0 ATGGCTAA-GTCTGGAACGTTTAGTTGCATGTGTTTACACCATAATCTA-GATTTTAATC 898
consensus_8931#5 ATGGCTAA-GTCTGGAACGTTTAGTTGCATGTGTTTACACCATAATCTA-GATTTTAATA 126
consensus_8931#4 GAAGTTAATGTGTATACAAGAGAGCAGC-TGCGTTCAT----TGCTTTG-AATTTAAAAA 120
consensus_8931#2 AATGCAAACGACGGGCAGACCTCTGAATTCATCGGTGACGAGACTACTC-TACTTTGATT 255
consensus_8931#3 --------------------------------------------------------GATC 4
consensus_8931#1 CTCACGCGAGCCGGGCGGTATCGATCGGTCCCGGTCGCGCTCACCACGCAGACGCAGCCC 421
consensus_8931#0 GACTAGTTTAA-ACAAAATTGATAACGGCTAACGGCTGATTGACAA-CATTTCA--AGAT 954
consensus_8931#5 GACTAGTTTAA-ACAAAATTGATAACGGCTAACGGCTGATTGACAA-CATTTCA--AGAT 182
consensus_8931#4 GCTTAAAACAATATGAAACAAACGAATGAATCCAGTTCATTTTGCC-CAGATAA--GCTT 177
consensus_8931#2 GTGGAAGTAGA-TTGGAATACTTTTATTCATTGCGATCGTCTGGTG-CGTTTGT--GGAT 311
consensus_8931#3 GCCCGAG--GN-TTGGAATACTTTTATTCATTGCGATCGTCTGGTG-CGTT-GT--GGAT 57
consensus_8931#1 GGCGGATTCGGATTCCGACTCGTCGACACGCCGCAATGGTGTGCTGACGTCGGCCCGCAC 481
* * * * *
consensus_8931#0 GCAAACGGATATAATATGTGTGGAGAAATACAACTGATTGCAAAGTAAGTTTGCAATTAT 1014
consensus_8931#5 GCAAACGGATATAATATGTGTGGAGAAATACAACTGATTGCAAAGTAAGTTTGCAATTAT 242
consensus_8931#4 ACTTATGAAAAAAAAACACATTCTGAAATA--ATTGCATCATATATAGATAATCGATCAC 235
consensus_8931#2 GCTTTCGCAAAAGAGGTATCATCAGTAAGC---TTCAGAGGCGATTGGGTTCATCATCCG 368
consensus_8931#3 GCTTTCGCAAGAGAGGTATCATCAGTAAGC---TTCAGAGGCGAT-GGGTTCATCATCCG 113
consensus_8931#1 ACTTTCCGAGGTGGCGCGCAAATCGAGCACCGTCTGGCAGGGCGCACTGATCCTGAAGAG 541
* * * * *
consensus_8931#0 TTTAGA-CACACTTTATTTAAGACACA-GTTGAATTTGTTTTTTAAACCATTCTCATTTT 1072
consensus_8931#5 TTTAGA-CACACTTTATTTAAGACACA-GTTGAATTTGTTTTT-AAACCATTCTCATTTT 299
consensus_8931#4 ATCAATTCACATCGAAAAGGTGTCGAATATAAAATATATCTCTCAGCCCTGTTTAATCTA 295
consensus_8931#2 TTTGGC-TACGCGACACGTAAAGCGTATCTTAACCAATTAACTT-----ACTTTTAGTTC 422
consensus_8931#3 TTTGGC-TACGCGACACGTAAAGCGTATCTTAACCAATTAACTTTGCTTACTTTTAGTTC 172
consensus_8931#1 TTCCCTTTTCCCGGC---CAAATTCCATCTCACCGATGGCGATGCCGATATCGTCGACGG 598
* * * * * *
consensus_8931#0 CACG----CAGTTTG-ACA----ATGT--TTGTCTCTAAAACACCTTCTGAAAATAGCTT 1121
consensus_8931#5 CACG----CAGTTTG-ACA----ATGT--TTGTCTCTAAAACACCTTCTGAAAATAGCTT 348
consensus_8931#4 TATGTGAGCAAGATG-ACACAG-ATGA--CAGTTGCATACGCAG-TACAGTATATAACAA 350
consensus_8931#2 AAAACAAGGAGCACATACGTAA-ATGCACCATTTGCGCTCCTTGCTCTTTCAATGTGCAT 481
consensus_8931#3 AAAACAAGGAGCACATACGTAA-ATGCACCATTTGCGCTCATTGCTCTTTCAATGTGCAT 231
consensus_8931#1 GCTAATGAAAGCACGAGGATGGCAAGCACCATTTGCGCATCACGCAACGTTTGCGCCTCG 658
* * * * *
consensus_8931#0 TTTTTCTTTATAATAACTGAA-GC-TAATGATTGT---AGTTCAGTTATTTATTCAGTGA 1176
consensus_8931#5 TTTTTCTTTATAATAACTGAA-GC-TAATGATTGT---AGTTCAGTTATTTATTCAGTGA 403
consensus_8931#4 AGTAGGAAATCGATACATACA-ATACATTAATGAT---AGCGCAGTAAGCAATGCCGGAA 406
consensus_8931#2 AGTAACCCTGTC-TAGAAATG-GCATACAAAAAAT---AACGAAACAATTTGTTCCATCA 536
consensus_8931#3 AGTAACCCTGTC-TAGAAATG-GCATACAAAAAAT---AACGAAACAATTTGTTCCATCA 286
consensus_8931#1 ATCAGCCGAAGCTGGAGGATGTGCAGAAAAGAATTTCCACCTCGTCGTCGCATGCCATCT 718
* * * * *
consensus_8931#0 AGCAGCATGGGCTTACTTTG--TTCGCTG--TNAGACNTTT----G-----CCTACGGCC 1223
consensus_8931#5 AGCAGCATTGGCTTACTTTTGTTTCGCTTGTTAAGACATTT----TGC---CTTACGGCC 456
consensus_8931#4 TAAGGAAAAGGCAACGATGAAGTGCAGTGAACAAAATGATGGTAATAG---TTTGCGGCC 463
consensus_8931#2 TCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCA-----ACGGGGAA 591
consensus_8931#3 TCGTAAGTACACACATCTTCATCTCATCCTATCTCACCATCCTGTCA-----ACGGGGAA 341
consensus_8931#1 TCCTCGGGCTGCCGGGCTCGAACCCGGCC-GTGTCGTCATCGGACGATGCAAGCGTACAG 777
* * * *
consensus_8931#0 TTTCAATTATGATTTGCTACCAGGATC-ACAGTACTCA--CAGTGT-CAGTAATTATTTG 1279
consensus_8931#5 TTTCAATTATGATTTGCTACCAGGATC-ACAGTACTCA--CAGTGT-CAGTAATTATTTG 512
consensus_8931#4 TTTCAATTATGATTTGCTACCAGGATC-ACAGTACTCA--CAGTGT-CAGTAATTATTTG 519
consensus_8931#2 AATGGAATACAAAGCGCGTCTATAACCTGCATCACTAAGCCAGAGCACTGCATCGAAACG 651
consensus_8931#3 AATGGAATACAAAGCGCGTCTATAACCTGCATCACCAAGCCAGAGCACTGCATCGAAACG 401
consensus_8931#1 ACTCGCCCGCTGCGCAATCTGGTAACCTACCTGAAGCAGAAGGAAGCCGCCGGGGTAATT 837
* * * * * * * *
consensus_8931#0 TA----AATTATTAATTATTTAATATCTCTATATTCATGCCTTC-TTCTGGTCACT---C 1331
consensus_8931#5 TA----AATTATTAATTATTTAATATCTCTATATTCATGCCTTC-TTCTGGTCACT---C 564
consensus_8931#4 TA----AATTATTAATTATTTAATATCTCTATATTCATGCCTTC-TTCTGGTCACT---C 571
consensus_8931#2 TC----TAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACT---A 704
consensus_8931#3 TC----TAACACTTTCAATTGCACGCATTTGTCAACAAGTGCCCGTTTTGAACACT---A 454
consensus_8931#1 TCGCTCTTGAACAAGGAAACGGAAGCGACCGGCGTGCTGTACACGTTCCCGCCGTGTGAA 897
* * * * * * ** *
consensus_8931#0 CTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTG--------------------- 1370
consensus_8931#5 CTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTGCTTTGAATTTTAAAAAAG--- 621
consensus_8931#4 CTGATTTTCATGTTTCGACTCGACCAGCTGCGTTCATTGCTTTGAATTTAAAAAGCTTAA 631
consensus_8931#2 CC-ACTACCATGTTACGA--TGACT----------------------------------- 726
consensus_8931#3 CC-ACTACCATGTTACGA--TGACTCTATGGCCGTTCTGCTCTGTTGTATCAACCGGTGA 511
consensus_8931#1 TTCTCCACCGAGCTGCGGGGCGGGACTGCCTAGGAGCGGGAGGAAGAGGCCGAT-GATCG 956
* * * ** *
consensus_8931#0 ------------------------------------------------------------
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 AGCAATATGAAACAAACGAA---------------------------------------- 651
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 CGTCTCAGTGGTGTAGAGTAACATGGTCGATGTTTGACGCTGTTCAGCAAACGATGTATG 571
consensus_8931#1 GGAGCTAGAGGTACGGAAGAAGAAAAGTAAGAAGCCAGCAAGTAAAACTAGCAAGTCGGA 1016
consensus_8931#0 ------------------------------------------------------------
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 TGTGCGACCCCAGTTTAG-GAAAAGTGCGCGCGTGATCTTCCCATCTATTCNATGCGTGC 630
consensus_8931#1 TAAACCATCATCATCTACCGACTAAAATGCAAACGACGGGCAGACCTCTGAATTCATCGG 1076
consensus_8931#0 ------------------------------------------------------------
consensus_8931#5 ------------------------------------------------------------
consensus_8931#4 ------------------------------------------------------------
consensus_8931#2 ------------------------------------------------------------
consensus_8931#3 GATCGTGTGTACTATNGANCAGA------------------------------------- 653
consensus_8931#1 TGACGAGACTACTCTACTTTGATTGTGGAAGTAGATTGGAATACTTTTATTCATTGCGAT 1136
consensus_8931#0 ----------
consensus_8931#5 ----------
consensus_8931#4 ----------
consensus_8931#2 ----------
consensus_8931#3 ----------
consensus_8931#1 CGTCTGGTGC 1146
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||