These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8957#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1908 fasta sequence [GAATCGCCCGAGGTNTATCTAAGTTTTATCGGAAACACATCGTTCGTGAAAAAAAAAATGTGCTACATATTATAATGTTTTTAAATGATGTTTGTTTATTTCCATTTTCTTATTATCCCTGTTTATCTGCGCACCACCTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTTATTACGAAGTGGAACTCACACCTTCACAATGCACGATTGTTCGCTGTGAATGGTGCAGTTCCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCTTCCTATTTT-GTCTTTCTTGGTGGCACACTTAGTGACACACTTTACTAGAAGAAGGAGCGTAGGACAAGACTATCCAAACCATCAGCGAGCGTGTTTGCTAAATACTGAAACAAATCGTTAAAATACATTCCTTTAGAAAAGATCAATACTAATAGCAGTAGCGGCACGATTGTTTCAACAACACTCGATTTCGGCAACCAACACACGGCAACAACATCTTTCAGTGTGACCTCTTTCGCTTTGCTTTCACGCCAGCCATGTCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTATGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGGTGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCATTTGAAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGGTCGTCTTGAACGCGGAAAATCACGATNCCAGGGAGCGTTAAATGAAGTTAATCGTTTTGTAAAGGTGTGCATGCGTGTGCAGCCAACATCCATGTGAGTCTGTCGTAAAAGAACAAAATATATATAAGTGTGTCTTGAAGAAAACATGTTATGGATTTGATCTTTCTTTTTTTCATTTATTAAAATCGAAGTATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGTAGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAAAGGGTGTACATTCTCATAACCACTACCGAGCTTAAGCGGGATGTTATTAAGAAATAAACAAACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAATGAGAAAAAATGAAACAAAAAATCAACACAAAAAAAAAAACACAGAAAG--TATATATATACATAATTATAGGTATGAATAGATATTGTTGTAAACGACGAGTAAACGAAACTTAGTTAATGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACACACGTAACAGGAAGCTCATAAAACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTTAGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGAACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAACGCCAGATATCTAGTTGAACGGTGAAGGGGAGCAC-GGAATAACCCACGAAGAGAGGGTACCCTGCATGGCGCGGTTGCAATAGCGAAGATTCTTCTTCCTCTGTCCAATCATTGCGGTGACCGGTCTCCGCTGGATTCTAATATCCCGCTTCGTTTGAGCAGTGAATTATGTGCAAAAAACGTTCACAATAAATACACCACGGTATGGGATGTACGATCCC] [+] EMBL AL930263 [GAATCGCCCGAGGTNTATCTAAGTTTTATCGGAAACACATCGTTCGTGAAAAAAAAAATGTGCTACATATTATAATGTTTTTAAATGATGTTTGTTTATTTCCATTTTCTTATTATCCCTGTTTATCTGCGCACCACCTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTTATTACGAAGTGGAACTCACACTTTCACAATGTACGATTGTTCGCTGTGAATGGTGCAGTTCCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGACGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCTTCCTATTTTAGTCTTTCTTGGTGGCACACTT ] [+] EMBL BM631700 [ TATCCCTGGTTATCTGCGCACCACTTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTTATTACGAAGTAAAACTCACACCTTCACAATGCACGATTGTTCCCTGTGAATGGGGCAGTTCCGGAAATGTCGTAGGGGTCCCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAAATGTATACGTTGGCCAACGTT ] [+] EMBL BX624549 [ CTCACACCTTCACAATGCACGATTGTTCGCTGTGAATGGTGCAGTTCCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATGTCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTTTGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCTTCCTATTTT TTCTTTTTTGGTGGTAGGAAGAGTGACACACTTTACTAGAAGAAGGAGCGTAGGACAAGACTATCCAAACCATCAGCGAGCGTGTTTGCTAAATACTGAAACAAATCGTTAAAATACATTCCTTTAGAAAAGATCAATACTAATAGCAGTAGCGGCACGATTGTTTCAACAACACTCGATTTCGGCAACCAACACACGGCAACAACATCTTTCAGTGTGACCTCTTTCGCTTTGCTTTCACGCCAGCCATGTCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTATGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGGTGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCATTTGAAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGGTCGTCTTGAACGCGGAAAATCACGATNC ] [+] EMBL BM600053 [ ccgCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTATGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGGTGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCAGCTGAAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGATCGTGTTGAACGCGGAAAATCACGATCCCAGGGAGCGTTAAATGAAGTTAATCGTTTTGTAAAGGTGTGCATGCGTGTGCAGCCAACATCCATGTGAGTCTGTCGTAAAAGAACAAAATATATATAAGTGTGTCTTGAAGAAAACATGTTATGGATTTGATCTTTCTTTTTTTCATTTATTAAAATCGAAGTATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGTAGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAAAGGGTGTACATTCTCATAACCACTACCGAGCTTAA ] [+] EMBL BM630343 [ ccgATTAAAATCGAAGTATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGTAGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAAAGGGTGTACATTCTCATAACCACTACCGAGCTTAAGCGGGATGTTATTAAGAAATAAACAAACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAATGAGAAAAAATGAAACAAAAAATCAACACAAAAAAAAAAACACAGAAAG TATATATATACATAATTATAGGTATGAATAGATATTGTTGTAAACGACGAGTAAACGAAACTTAGTTAATGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACACACGTAACAGGAAGCTCATAAAACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTTAGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGAACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAACGCCAGATATCTAGTTGAACGGTGAAAGGGAGCACGGGAATAACCCACGAAGAGAGGGTACCCTG ] [+] EMBL BM631618 [ ccgGAGCTTAAGCGGGATGTTATTAAGAAATAAACAAACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAATGAGAAAAAATGAAACAAAAAATCAACAC AAAAAAAAACACAGAAAGTATATATATATACATAATTATAGGTATGAATAGATATTGTTGTAAACGACGAGTAAACGAAACTTAGTTAATGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACATACGTAACAGGAAGCTCATAAAACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTTAGGGGGTTGCATTAGAAGACAATGACAAAGCACAGCGTTAAATATTGTACGATAGAGCGAACATCAGCATGTATGGTATTCACATCAACAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAGCGCCAGATATCAAGTTGAACGGTGAAGGGGAACAC GGAATAACCCACGACGAGAGGGTACCCTGCATGGCGCGGTTGCAATAGCGAAGATTCTTCTTCCTCTGTCCAATCATTGCGGTGACCGGTCTCCGCTGGATTCTAATATCCCGCTTCGTTTGAGCAGTGAATTATGTGCAAAA ] [+] EMBL BM621261 [ ccgCTTAGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGAACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGAACGACCAGCAACGCCAGATATCTAGTTGAACGGTGAAGGGGAGCAC GGAATAACCCACGAAGAGAGGGTACCCTGCATGGCGCGGTTGCAATAGAGAAGATTCTTCTTCCTCTGTCCAACCATTGCGGTGACCGGTTCCCCCTGGATTCTAATATCCCGCTTCGTTTGAGCAGTGAATTATGTGCAAAAAACGTTCACAATAAATACACCACGGTATGGGATGTACGATCCC] consensusID : consensus_8957#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1507 fasta sequence [CGACCCACGCGTCCGCTTGGTGACAATTACGCACAAGGCTGTCATAGTGACCGCCTGAGCATCCTGTAAATTTGTCTGTTTCTTTTAATGCATGAGTTACTGTAAGGCAAAACTGCAGATTTTAACAGCCGCTTAGGTTTCGTAACCAAGCACCATGCTCCGGACGGTAATGAAAACATGTATATTTGTATGCGAGTGTGTTGGTTTCTATTCCGTTATGCCAGTGTATATTCCAACGGGGCATTATTTGGCATTATTCCCAGTTCAGGCTTTCGGTACTTAAACTTAAACTTAACTACGTAATGCGATATTTGATCCCGTACCTACCCATGTATGTATATATTTTGAGCTTAAAAATGATTGAAAAGAGAATATTCAAACAAACAAAAAGAAGACTTTCTTTCGGCCCCTTTGGCTTCTTACGCGATGCGATTGAACGCATATTGGAATGATGCTGACCAGACGTGATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGCTGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACGTTGGTTACTGTTCGAAATATTCCTATCTGTATATATCTATATTTTTTGTACTAGTTACCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAACGGCAACTTTGTCCCAAGACAGTATGTATGTATCCAGTCAGCACAACATAGTACATTATTGCTGGAATGTTTTGCAACACCAATGTAAGAGTTTAGTCCACAATTTCACGCCCATAAAATCGTTTGCGCGCTTTGAAATATTATTGAACATTATTAATCATTTGGCTTTGTTCATATCTATTTTGCTCATTAGCCTGAGGGCTTTTACAACAGAGCGCATCCATTACACCCTTTCTAAAAGCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACGGTTGTATCATTAAACATACAGGATCGAGGTGTCCGGTTTTTTTTTCTTTTCTTTCAATTTGTTAATTAATCCCTTTGAACAAAAAACAAACATAAAATATTGCCTTCCATTTAGAAATACGAAAAAAAAAATTAATAAAAAGAAGTAGAACTAAANAGATAGAAAAGAAACATAGTCGAAAAAATCGTTTTCAATTACTAGCTATTCTAAATAAAATGCTCTAAAACACTCACACACACACACAATCAAATAGCCAATTTTGGAGATTGATCATTTTGACATCAACATTTTTTTCGTTTTTCCTCATTACTTTAGGCAGAAAAAAGCGCGTGCTGCGAAATTTGTCATTTGTAATCTGNTTCAAAGAATTTTGACCCGCCCTTCTTGCTCGCTTGAAGAAATGATTAGTGAAAGTGGTGTGTTTTGCTTAGATTTGTTAATCTCACAGGACTCTTGGTAATGAAATTTAGCGATACGCCTATGTCCCCTCAATTGTTTAGAGCAGCAAGTGACTGAAAACCTT] [+] EMBL BM630865 [CGACCCACGCGTCCGCTTGGTGACAATTACGCACAAGGCTGTCATAGTGACCGCCTGAGCATCCTGTAAATTTGTCTGTTTCTTTTAATGCATGAGTTACTGTAAGGCAAAACTGCAGATTTTAACAGCCGCTTAGGTTTCGTAACCAAGCACCATGCTCCGGACGGTAATGAAAACATGTATATTTGTATGCGAGTGTGTTGGTTTCTATTCCGTTATGCCAGTGTATATTCCAACGGGGCATTATTTGGCATTATTCCCAGTTCAGGCTTTCGGTACTTAAACTTAAACTTAACTACGTAATGCGATATTTGATCCCGTACCTACCCATGTATGTATATATTTTGAGCTTAAAAATGATTGAAAAGAGAATATTCAAACAAACAAAAAGAAGACTTTCTTTCGGCCCCTTTGGCTTCTTACGCGATGCGATTGAACGCATATTGGAATGATGCTGACCAGACGTGATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGCTGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACGTTGGTTACTGTTCGAAATATTCCTATCTGTATATATCTATATTTTTTGTACTAGTTACCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAACGGCAACTTTGTCCCAAGACAGT ] [+] EMBL BX624107 [ ATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGCTGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACGTTGGTTACTGTTCGAAATATTCCTATCTGTATATATCTATATTTTTTGTACTAGTTACCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAACGGCAACTTTGTCCCAAGACAGTATGTATGTATCCAGTCAGCACAACATAGTACATTATTGCTGGAATGTTTTGCAACACCAATGTAAGAGTTTAGTCCACAATTTCACGCCCATAAAATCGTTTGCGCGCTTTGAAATATTATTGAACATTATTAATCATTTGGCTTTGTTCATATCTATTTTGCTCATTAGCCTGAGGGCTTTTACAACAGAGCGCATCCATTACACCCTTTCTAAAAGCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACGGTTGTATCATTAAACATACAGGATCGAGGTGTCCGGTTTTTTTTTCTTTTCTTTCAATTTGTTAATTAATCCC ] [+] EMBL BX620878 [ TTACACCCTTTCTAAAAGCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACGGTTGTATCATTAAACATACAGGATCGAGGTGTCCGGTTTTTTTTTCTTTTCTTTCAATTTGTTAATTAATCCCTTTGAACAAAAAACAAACATAAAATATTGCCTTCCATTTAGAAATACGAAAAAAAAAATTAATAAAAAGAAGTAGAACTAAANAGATAGAAAAGAAACATAGTCGAAAAAATCGTTTTCAATTACTAGCTATTCTAAATAAAATGCTCTAAAACACTCACACACACACACAATCAAATAGCCAATTTTGGAGATTGATCATTTTGACATCAACATTTTTTTCGTTTTTCCTCATTACTTTAGGCAGAAAAAAGCGCGTGCTGCGAAATTTGTCATTTGTAATCTGNTTCAAAGAATTTTGACCCGCCCTTCTTGCTCGCTTGAAGAAATGATTAGTGAAAGTGGTGTGTTTTGCTTAGATTTGTTAATCTCACAGGACTCTTGGTAATGAAATTTAGCGATACGCCTATGTCCCCTCAATTGTTTAGAGCAGCAAGTGACTGAAAACCTT] consensusID : consensus_8957#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 615 fasta sequence [CCGCAGACGGCCCCGTTCGTACCAGCGAAACCGAAAAAACACCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGG] [+] EMBL BM627500 [CCGCAGACGGCCCCGTTCGTACCAGCGAAACCGAAAAAACACCATAAATCCGGGCGAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCGGCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCCGGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAGCAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTGGAGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGTACGGAGGGTCTGGTGCGTGGGCAGCGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACCTGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGATCCTGGTGACGGGCATCAAGGTGGTGGACCTGCTGGCCCCGTACGCGAAGGGCGGCAAGATCGGCCTGTTCGGTGGTGCCGGCGTTGGCAAGACCGTACTCATCATGGAGCTGATCAACAACGTCGCCAAGGCGCACGGTGG] consensusID : consensus_8957#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 590 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTGATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCCCCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTTTGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCACAAACAACCCCCACGTGAAGTCAACGAGATGGTACGTGTTGTGCTCTCGTCGTCCTGTGTCCGTCCTGTATGTGTTTTATCATCACCACCACCACCAACACCATCAGCTTTACCGTGCCCCATCCCTGCCCCAACCGAGCGTACATATGTGTATGTGTGCGTGTGTGTGTTCGTACGAGACAAAACCAACACACACACACAGGGTAGAAGTACGTTTTGTGTAAGTGTGAGGGTAAGCAACAACAACAACAACAACAATCGACATGTAGTTGTGATCCAACGAAGTCATTAAGACCTGGGAGTAAGCATTAGGTTTGAGTGAGAGAGAGAGACGTGTAC] [+] EMBL BM622436 [CCGCCCACGCGTCCGCCCACGCGTCCGGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTGATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCCCCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTTTGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCACAAACAACCCCCACGTGAAGTCAACGAGATGGTACGTGTTGTGCTCTCGTCGTCCTGTGTCCGTCCTGTATGTGTTTTATCATCACCACCACCACCAACACCATCAGCTTTACCGTGCCCCATCCCTGCCCCAACCGAGCGTACATATGTGTATGTGTGCGTGTGTGTGTTCGTACGAGACAAAACCAACACACACACACAGGGTAGAAGTACGTTTTGTGTAAGTGTGAGGGTAAGCAACAACAACAACAACAACAATCGACATGTAGTTGTGATCCAACGAAGTCATTAAGACCTGGGAGTAAGCATTAGGTTTGAGTGAGAGAGAGAGACGTGTAC] consensusID : consensus_8957#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 114 fasta sequence [GCAAGGGAACAGCGCCAAGGACACGATCAAGGGGCTGCCCTGCCAGACGCGCGCAGGCGAAACGCCGGTCGGGGCATTCGACGGGCCGCCGAACAACAACCACACCCAGAAGCC] [+] EMBL BX610249 [GCAAGGGAACAGCGCCAAGGACACGATCAAGGGGCTGCCCTGCCAGACGCGCGCAGGCGAAACGCCGGTCGGGGCATTCGACGGGCCGCCGAACAACAACCACACCCAGAAGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 GAATCGCCCGAGGTNTATCTAAGTTTTATCGGAAACACATCGTTCGTGAAAAAAAAAATG 60 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ------------------------------------------------------------ consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TGCTACATATTATAATGTTTTTAAATGATGTTTGTTTATTTCCATTTTCTTATTATCCCT 120 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ------------------------------------------------------------ consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 GTTTATCTGCGCACCACCTTATCACGCCCACACACGCACTTTTTCGCTTGGTAATGGTTT 180 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ------------------------------------------------------------ consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 ATTACGAAGTGGAACTCACACCTTCACAATGCACGATTGTTCGCTGTGAATGGTGCAGTT 240 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ------------------------------------------------------------ consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 CCGGAAATGTCGTAGGTGTCGCAGTATTTTTGATCTATCTTATGTATGTTGCAAATAATG 300 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ------------------------------------------------------------ consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TCCCTACAAAAATATGATAATATTTTTCCATCGTAAGCTTTTAAGTAAATCCCACGTCTT 360 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ------------------------------------------------------------ consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TGCTCTAGCGGCGTTTGTGTAGCGGGTGCTATGAGATGTATACGTTGGCCAACGTTTCCT 420 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ---------------------------------CGACCCACGCGTCCGCTTGGTGACAAT 27 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TCCTATTTTGTCTTTCTTGGTGGCACACTTAGTGACACACTTTACTAGAAGAAGGAGCGT 480 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 TACGCACAAGGCTGTCATAGTGACCGCCTGAGCATCCTGTAAATTTGTCTGTTTCTTTTA 87 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 AGGACAAGACTATCCAAACCATCAGCGAGCGTGTTTGCTAAATACTGAAACAAATCGTTA 540 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 ATGCATGAGTTACTGTAAGGCAAAACTGCAGATTTTAACAGCCGCTTAGGTTTCGTAACC 147 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 AAATACATTCCTTTAGAAAAGATCAATACTAATAGCAGTAGCGGCACGATTGTTTCAACA 600 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 AAGCACCATGCTCCGGACGGTAATGAAAACATGTATATTTGTATGCGAGTGTGTTGGTTT 207 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 ACACTCGATTTCGGCAACCAACACACGGCAACAACATCTTTCAGTGTGACCTCTTTCGCT 660 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 CTATTCCGTTATGCCAGTGTATATTCCAACGGGGCATTATTTGGCATTATTCCCAGTTCA 267 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TTGCTTTCACGCCAGCCATGTCACATTTTCGGTAGAAAAAGTAAAAGTAATTGTAATGTA 720 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 GGCTTTCGGTACTTAAACTTAAACTTAACTACGTAATGCGATATTTGATCCCGTACCTAC 327 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TGATATTGCTCCATTAGAAAGAATACCACCTAACAGGTCGTGGCCGGTGGTTCAATCCGG 780 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 CCATGTATGTATATATTTTGAGCTTAAAAATGATTGAAAAGAGAATATTCAAACAAACAA 387 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TGCACTACATACGTCTCCTTACCGCCAGCATCTTGCTTTGCGAACACCAAAATGCATTTG 840 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 AAAGAAGACTTTCTTTCGGCCCCTTTGGCTTCTTACGCGATGCGATTGAACGCATATTGG 447 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 AAGCTTTTGCTGATCGTTCGAAGCAATGGTATGGAAATCTGTGTAATGGTCGTCTTGAAC 900 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 AATGATGCTGACCAGACGTGATGCAAGTAAACAGCGTCAAACCGGGCGGGCTAGCTAAGC 507 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 GCGGAAAATCACGATNCCAGGGAGCGTTAAATGAAGTTAATCGTTTTGTAAAGGTGTGCA 960 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 TGCACCGCTACGAAACAGAATAAACGTACGGAGAGCATGTTTCTTTCTTTTTGGTAGACG 567 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TGCGTGTGCAGCCAACATCCATGTGAGTCTGTCGTAAAAGAACAAAATATATATAAGTGT 1020 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 TTGGTTACTGTTCGAAATATTCCTATCTGTA---TATATCTATATTTTTTGTACTAGTTA 624 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 GTCTTGAAGAAAACATGTTATGGATTTGATCTTTCTTTTTTTCATTTATTAAAATCGAAG 1080 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 CCTTGAATTTTTTTAAATTATCATAGCGGTTTGAGTTACTGAATGTCGGGCTAAATCTAA 684 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TATTATAAGCAAACGCTTTCTTCGCGTAAATGTGTTGCCACCGGCTTTCTTACCGAAAGT 1140 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 CGGCAACTTTGTCCCAAGACAGTATGTATGTATCCAGTCAGCACAACATAGTACATTATT 744 consensus_8957#2 ------------------------------------------------------------ consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 AGTAAACCCGGCCAGCATGAGATCTTGGCCGAAAAAAGAGAAGGAAGGATTCGTTTGGAA 1200 consensus_8957#3 ------------------------------------------------------------ consensus_8957#1 GCTGGAATGTTTTGCAACACCAATGTAAGAGTTTAGTCCACAATTTCACGCCCATAAAAT 804 consensus_8957#2 -----CCGCAGACGGCCCCGTTCGTACCAGCGAAACCGAAAAAACACCATAAATCCGGGC 55 consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 AGGGTGTACATTCTCATAACCACTACCGAGCTTAAGCGGGATGTTATTAAGAAATAAACA 1260 consensus_8957#3 ----------------------------------------------CCGCCCACGCGTCC 14 consensus_8957#1 CGTTTGCGCGCTTTGAAATATTATTGAACATTATTAATCATTTGGCTTTGTTCATATCTA 864 consensus_8957#2 GAAAGGGTGTGACATTCGAGAAAAGAGATGTTTTCCTCGATGAAAACGCTCATGTCCGCG 115 consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 AACTATATGTATATTGGAAGGAAAGTAGAACTTAATATAAAGGAAACAAGTAGGAGCAAT 1320 consensus_8957#3 GCCCACGCGTCCGGATCGCAACTTTCGGTGCGATATCCTGAGACACCCCCCATCCCTGTG 74 consensus_8957#1 TTTTGCTCATTAGCCTGAGGGCTTTTACAACAGAGCGCATCCATTACACCCTTTCTAAAA 924 consensus_8957#2 GCGACCAGGCCGATCTTGGCCCGGTCGTACGCGGCAAAGGCGGCGGTGAATGCCGCGGCC 175 consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 GAGAAAAAATGAAACAAAAAATCAACACAAAAAAAAAAACACAGAAAGTATATATATACA 1380 consensus_8957#3 ATCATCCAGCTTTATTGTCGGCGGCCACACAACTTAAAAGCTCCCCGTTCTTACAATCCC 134 consensus_8957#1 GCTACCGGCTACGTTAAAGCCGTCTCGGTTTGACAGGAAGTTGCACGTTTTACAGATACG 984 consensus_8957#2 GGAGCGCAGGGTAAGGTAGTGGCCGTCATCGGTGCCGTCGTGGACGTGCAGTTCGACGAG 235 consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TAATTATAGGTATGAATAGATATTGTTGTAAA---CGACGAGTAAACGAAACTTAGTTAA 1437 consensus_8957#3 CCGCAATAAACAACCACCACACGAGGGCGCGCGAGCGTGAGTGTGTCCCCCCTCAACCTT 194 consensus_8957#1 GTTGTATCATTAAACATACAGGATCGAGGTGTC-CGGTTTTTTTTTCTTTTCTTTCAATT 1043 consensus_8957#2 CAGCTGCCCCCGATTCTGAACGCGCTGGAGGTGCAGGGCCGCAGCGCCCGGCTGGTGCTG 295 consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 TGCAGAATCGCGCGTTTGATCACTAGGAGAAACTTGAACACACGTAACAGGAAGCTCATA 1497 consensus_8957#3 TGTGATTGCTTTTCTCTCATCAACTCGCTCAAACACTCCCCCCCCCCAACAAAACCACAA 254 consensus_8957#1 TGTTAATTAATCCCTTTGAACAAAAAACAAACATAAAATATTGCCTTCCATTTAGAAATA 1103 consensus_8957#2 G-AGGTTGCGCAACATCTGGGTGAGAACACGGTGCGCACCATCGCCATGGACGGT-ACGG 353 consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 A-AACAACAACTTTATGCAACAAATGTAATACAGCCAACTCTGGGGGGAGAGGATGACTT 1556 consensus_8957#3 ACAACCCCCACGTGAAGTCAACGAGATGGTACGTGTTGTGCTCTCGTCGTCCTGTGTCCG 314 consensus_8957#1 CGAAAAAAAAAATTAATAAAAAGAAGTAGAACTAAANAGATAGAAAAGAAACATAGTCGA 1163 consensus_8957#2 AGGGTCTGGTGCGTGGGCAGCGCGAGCCGATCGATGAGCGTGGCCCGATCGACACGAACC 413 consensus_8957#4 ------------------------------------------------------------ consensus_8957#0 AGGGGGTGGCATTAGAAGACAATGACAAAGCACAGCGTTCAATACTGTACGATAGAGCGA 1616 consensus_8957#3 TCCTGTATGTGTTTTATCATCACCACCACCACCAACACCATCAGCTTTACCGTGCCCCAT 374 consensus_8957#1 AAAAATCGTTTTCAATTACTAGCTATTCTAAATAAAATGCTCTAAAACACTCACACACAC 1223 consensus_8957#2 TGTCGGCGCCGATCCACGCCGAGGCGCCCGAGTTCATCGAGATGAGCGTCGAGCAGGAGA 473 consensus_8957#4 ----------------------------------------------------GCAAGGGA 8 consensus_8957#0 ACATCATCATGTATGGTATTCACATCACCAAGTTCAGCTATATTCGCACCGAACGAACGA 1676 consensus_8957#3 CCCTGCCCCAACCGAGCGTACATATGTGTATGTGTGCGTGTGTGTGT-TCGTACGAGACA 433 consensus_8957#1 ACACAATCAAATAGCCAATTTTGGAGATTGATCATTTTGACATCAACATTTTTTTCGTTT 1283 consensus_8957#2 TCCTGGTGACGGGCAT---CA--AGGTGGTGGACCTGCTG-GCCCCGTACGCGAAGGGCG 527 consensus_8957#4 ACAGCGCCAAGGACAC---GATCAAGGGGCTGCCCTGCCA-GACGCGCGCAGGCGAAACG 64 consensus_8957#0 ACGACCAGCAACGCCA---GAT-ATCTAGTTGAACGGTGAAGGGGAGCACGGAATAACCC 1732 consensus_8957#3 AAACCAACACACACACACAGGGTAGAAGTACGTTTTGTGTAAGTGTGAGGGTAAGCAACA 493 consensus_8957#1 TTCCTCATTACTTTAGGCAGAA-AAAAGCGCGTGCTGCGAAATTTGTCATTTGTAATCTG 1342 * * * consensus_8957#2 GCAAGATCGG-CCTGTTCGGTGGTGC-CGGCGTTGGCAA-GACCG--TACTCATCATGGA 582 consensus_8957#4 CC--GGTCGG-GGCATTCGACGG-GC-CGCCG--AACAACAACCA--CACCCA----GAA 111 consensus_8957#0 ACGAAGAGAG-GGTACCCTGCATGGCGCGGTTGCAATAGCGAAGA--TTCTTCTTCCTCT 1789 consensus_8957#3 ACAACAACAACAACAATCGACATGTAGTTGTGA-TCCAACGAAGT--CATTAAGACCTGG 550 consensus_8957#1 NTTCAAAGAATTTTGACCCGCCCTTCTTGCTCGCTTGAAGAAATGATTAGTGAAAGTGGT 1402 * * * consensus_8957#2 GCTGATCAACAACGTCGCCAAGGCGCACGGTGG--------------------------- 615 consensus_8957#4 GCC--------------------------------------------------------- 114 consensus_8957#0 GTCCAATCATTGCGGTGACCGGTCTCCGCTGGATTCTAATATCCCGCTTCGTTTGAGCAG 1849 consensus_8957#3 GAGTAAGCATTAGGTTTGAGTGAGAGAGAGAGACGTGTAC-------------------- 590 consensus_8957#1 GTGTTTTGCTTAGATTTGTTAATCTCACAGGACTCTTGGTAATGAAATTTAGCGATACGC 1462 * consensus_8957#2 ----------------------------------------------------------- consensus_8957#4 ----------------------------------------------------------- consensus_8957#0 TGAATTATGTGCAAAAAACGTTCACAATAAATACACCACGGTATGGGATGTACGATCCC 1908 consensus_8957#3 ----------------------------------------------------------- consensus_8957#1 CTATGTCCCCTCAATTGTTTAGAGCAGCAAGTGACTGAAAACCTT-------------- 1507 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||