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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8958#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1021 fasta sequence
[GAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGTGCCGGTGGCGATTAACTCCGTCGCACGGCGCTATCTCGAACGGAGTGGTATACAGGATGATCTTTCCACGTCGGCCGCCAGACTGCCCCGTACGCTCAGCCCCACCGGCCCGGGTCAGACCACGCTCGACGACACGGTGACGGTGAACAATCTGCGCAACAGTGCGCTACGACTGCGCAGCTCGGTTTCGGTGGACTGGGATGCGATGGAGGCGGTCGAAAATCGATCGATGAAGACGATCAACACCTTCCTGAAGCGGCACGCCGTAGCCAGTTCGGCCGTGAAACAGATCCAAGCACAGCTAGAGGCAACCATTACAACGCACAAGTAGGATAGACGGATTCCTCTGCTCACAATCAGGGTGTTTGAGGGTGTTCGATAGCAATGAGATGATTGTACATACAATACGCACCCTCTTTTCTATACGCCATGTGTATTTATACGTAGCTTTACTTATCGGTGATGTAAGCAGTAGCGAAGCGATGCAGTTTCAGTGTTAGCATATTTTTGTATAGATTACACACGATCGTAGGAGGTAATGGTTATAGAGAAAAGAAGAGGAAAGGCACAGTACGCTGTAGTGCCTTATCGCACCAAGTGTGATTAGGTAGAGAGTATGTAGCTTACAATTCAAAGTGAATCACAAAAGATGGGAATAAAATGCAGAGAGAATTCTGATACTCTACGCTATCTTCGTAAGGGGTACGTCAATGTTGCTCTGTAA]
[+] EMBL BX626288 [GAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGTGCCGGTGGCGATTAACTCCGTCGCACGGCGCTATCTCGAACGGAGTGGTATACAGGATGATCTTTCCACGTCGGCCGCCAGACTGCCCCGTACGCTCAGCCCCACCGGCCCGGGTCAGACCACGCTCGACGACACGGTGACGGTGAACAATCTGCGCAACAGTGCGCTACGACTGCGCAGCTCGGTTTCGGTGGACTGGGATGCGATGGAGGCGGTCGAAAATCGATCCATGAAGACGATCAATACCTTCCTGAAGCGGCACGCCGTAGCCAGTTCGGCCGTGAAACAGATCCAAGCACAGCTAGAGGCAACCATTACAACGCACAAGTAGGATAGACGGATTCCTCTGCTCACAATCAGGGTGTTTGAGGGTGTTCGATAGCAATGAGATGATTGTACATACAATACGCACCCTCTTTTCTATACGCCATGTGTATTTATACGTAGCTTTACTTATCGGNGATGT ]
[+] EMBL BM591784 [ ccgCCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGTGCCGGTGGCGATTAACTCCGTCGCACGGCGCTATCTCGAACGGAGTGGTATACAGGATGATCTTTCCACGTCGGCCGCCAGACTGCCCCGTACGCTCAGCCCCACCGGCCCCGGTCAGACCACGCTCGACGACACGGTGACGGTGAACAATCTGCGCAACAGTGCGCTACGACTGCGCAGCTCGGTTTCGGTGGACTGGGATGCGATGGAGGCGGTCGAAAATCGATCGATGAAGACGATCAACACCTTCCTGAAGCGGCACGCCGTAGCCAGTTCGGCCGTGAAACAGATCCAAGCACAGCTAGAGGCAACCATTACAACGCACAAGTAGGATAGACGGATTCCTCTGCTCACAATCAGGGTGTTTGAGGGTGTTCGATAGCAATGAGATGATTGTACATACAATACGCACCCTCTTTTCTATACGCCATGTGTATTTATACGTAGCTTTACTTATCGGTGATGTAAGCAGTAGCGAAGCGATGCAGTTTCAGTGTTAGCATATTTTTGTATAGATTACACACGATCGTAGGAGGTAATGGTTATAGAGAAAAGAAGAGGAAAGGCACAGTACGCTGTAGTGCCTTATCGCACCAAGTGTGATTAGGTAGAGAGTATGTAGCTTACAATTCAAAGTGAATCA ]
[+] EMBL BX615286 [ GATGGAGGCGGTCGAAAATC CGATGAAGACGATCAACACCTACCTGAAGCGGCACGCCGTAGCCAGTCCGGCCGTGAAACAGATCCAAGCACAGCTAGAGGCAACCATTACAACGCACAAGTAGGAAAGACGGATTCATCTGCTCACAATCAGGGTGTTTGAGGGTGTTCGATAGCAATGAGATGATTGTACATACAATACGCACCCTCTTTTCTATACGCCATGTGTATTTATACGTAGCTTTACTTATCGGTGATGTAAGCAGTAGCGAAGCGATGCAGTTTCAGTGTTAGCATATTTTTGTATAGATTACACACGATCGTAGGAGGTAATGGTTATAGAGAAAAGAAGAGGAAAGGCACAGTACGCTGTAGTGCCTTATCGCACCAAGTGTGATTAGGTAGAGAGTATGTAGCTTACAATTCAAAGTGAATCACAAAAGATGGGAATAAAATGCAGAGAGAATTCTGATACTCTACGCTATCTTCGTAAGGGGTACGTCAATGTTGCTCTGTAA]
consensusID : consensus_8958#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 703 fasta sequence
[CCGCGCACCGAAAGCAATCACGTGAATACGTTGTAATGGTGGAGAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGA-TTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAA-GAT-CGCCGCCTATCTG-GGCGACGTGCT-GGAGGACCAGCGCGACAAGCTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGCTTTCCAGTGGGATTTGGCCAAGTATCCGACGAAGCAGTCGCTGCGCAACATTGCCGACATCATTTCCAAACAAGTCGGACAAATCGACGCGG]
[+] EMBL BM594743 [CCGCGCACCGAAAGCAATCACGTGAATACGTTGTAATGGTGGAGAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCC GGACCGTCTCTCGCGAGCGCGTACACATCCTTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGA TTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAA GAT CGCCGCCTATCTG GGCGACGTGCT GGAGGACCAGCGCGACAAGCTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGCTTT CAGTGGGATTTGGCCAAGTATCCGACGAAGCAGTCGCTGCGCAACATTGCCGACATCATTTCCAAACAAGTCGGACAAATCGACGCGG]
[+] EMBL BM636628 [ ccgCGTGAATACGTTGTAATGGTGGAGAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGATTGTCCGATGA TTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAA GAT CGCCGCCTATCTG GGCGACGTGCT GGAGGACCAGCGCGACAAGCTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGCTTTCCAGTGGGATTTGGCCAAGTAT ]
[+] EMBL BX619561 [ tgttnACGTTGTCATGGTGGAGAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGG ATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGATTTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAANGATNCGCCGCCTACCTGNNGCGACGTGCTGGGAGGACCAGCGCGACAAGCTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCANNCGCTTc ]
[+] EMBL BM637448 [ ccgGGAGAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCGGCGGTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGA TTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAA GAT CGCCGCCTACCTG GGCGACGTGCT GGAGGACCAGCGCGACAAGTTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGC TTCCAGTGGGATTTGGCCAAGTATCCGACGAAGCAG ]
[+] EMBL BM600267 [ ccgGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACTATGACCGAATACTGGTTAATATCCGCACCGGGTGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGTAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTG ]
consensusID : consensus_8958#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 697 fasta sequence
[CCGCGGACGCGTGGGTCCTGCCCAAGTCTATCAGTCTCTGCAACGAAGATTCGGTGTTCAAGGAGAACTATACGAAGTTTTGCGATCGTAACGCGTCTGGCAGGTTATCGCGCGAACAATCGCAGGAGACGACGGTAAGCGAAAAGATAGATACAGTCGGTACAATTGTACGCAAGAAGTCGACCACGTCGTCAACGGCAAAGAAGAAAAAAGATCCAGAAGGAGCGGCCACGGCGACGACGACGACCACAACCACTACGACCTTCTCGAGTACACCCTCGGGAAAGATCGCTTCCACTACTACGGTGCGCAAAACGATCGTTAAACAGCAGAAGATTGTAGTGGAAGATGCGAGTTCGAGTGTGACAACTGTCGGGACCTCCGAGAGCAGCAGATCGAGATCGATCGCACCAACCAAGAGTCTCGATGTGTCATCATCGTCAACGGCATTGGACAGCAGCAAGTTAACGCATTCGGCTTCGATCAAGCGTACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGTGCCGGTGGCGATTAACTCCGTCGCACGGCGCTATCTCGAACGGAGTGGTATACAGGATGATCTTTCCACGTCGGCCGCCAGACTGCCCCGTACGCTCAGCCCCACCGGCCCGGGTCAGACCACGCTCGACGACACGGTGACGGTGAACAATCTGCGCAACAGTGCGCT]
[+] EMBL BM651361 [CCGCGGACGCGTGGGTCCTGCCCAAGTCTATCAGTCTCTGCAACGAAGATTCGGTGTTCAAGGAGAACTATACGAAGTTTTGCGATCGTAACGCGTCTGGCAGGTTATCGCGCGAACAATCGCAGGAGACGACGGTAAGCGAAAAGATAGATACAGTCGGTACAATTGTACGCAAGAAGTCGACCACGTCGTCAACGGCAAAGAAGAAAAAAGATCCAGAAGGAGCGGCCACGGCGACGACGACGACCACAACCACTACGACCTTCTCGAGTACACCCTCGGGAAAGATCGCTTCCACTACTACGGTGCGCAAAACGATCGTTAAACAGCAGAAGATTGTAGTGGAAGATGCGAGTTCGAGTGTGACAACTGTCGGGACCTCCGAGAGCAGCAGATCGAGATCGATCGCACCAACCAAGAGTCTCGATGTGTCATCATCGTCAACGGCATTGGACAGCAGCAAGTTAACGCATTCGGCTTCGATCAAGCGTACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGTGCCGGTGGCGATTAACTCCGTCGCACGGCGCTATCTCGAACGGAGTGGTATACAGGATGATCTTTCCACGTCGGCCGCCAGACTGCCCCGTACGCTCAGCCCCACCGGCCCGGGTCAGACCACGCTCGACGACACGGTGACGGTGAACAATCTGCGCAACAGTGCGCT]
consensusID : consensus_8958#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 681 fasta sequence
[CCGCCCACGCGTCCGGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGATTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAAGATCGCCGCCTACCTGGGCGACGTGCTGGAGGACCAGCGCGACAAGTTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGCTTCCAGTGGGATTTGGCCAAGTATCCGACGAAGCAGTCGCTGCGCAACATTGCCGACATCATTTCCAAGCAAGTCGGACAGATCGACGCGGATCTGAAGACGAAATCGGCCGCGTACAACAATCTGAAGGGCAACCTGCAGAACTTGGAGAAGAA]
[+] EMBL BM610534 [CCGCCCACGCGTCCGGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTTGGTTCGGCTGCAATCTCCGGGACCGTCTCTCGCGAGCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCCCATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGATTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAAGATCGCCGCCTACCTGGGCGACGTGCTGGAGGACCAGCGCGACAAGTTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGCTTCCAGTGGGATTTGGCCAAGTATCCGACGAAGCAGTCGCTGCGCAACATTGCCGACATCATTTCCAAGCAAGTCGGACAGATCGACGCGGATCTGAAGACGAAATCGGCCGCGTACAACAATCTGAAGGGCAACCTGCAGAACTTGGAGAAGAA]
consensusID : consensus_8958#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence
[CCGCGAAGGTGAACACGATCCGCACCTCCCGGGCGCAGAACAAGCTGAATGAGCTGGCCCAGCGGCCCGACTTCCTCGCGAACGATCCGTTCAAGCTGCCCACGTTCCGGTTCCTGCCCAAGTCTATCAGTCTCTGCAACGAAGATTCGGTGTTCAAGGAGAACTATACGAAGTTTTGCGATCGTAACGCGTCTGGCAGGTTATCGCGCGAACAATCGCAGGAGACGACGGTAAGCGAAAAGATAGATACAGTCGGTACAATTGTACGCAAGAAGTCGACCACGTCGTCAACGACAAAGAAGAAAAAAGATCCAGAAGGAGCGGCCACGGCGACGACGACGACCACAACCACTACGACCTTCTCGAGTACACCCTCGGGAAAGATCGCTTCCACTACTACGGTGCGCAAAACGATCGTTAAACAGCAGAAGATTGTAGTGGAAGATGCGAGTTCGAGTGTGACAACTGTCGGGACCTCCGAGAGCAGCAGATCGAGATCGATCGCACCAACCAAGAGTCTCGATGTGTCATCATCGTCAACGGCATTGGACAGCAGCAAGTTAACGCATTCGGCTTCGATCAAAGCGTACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGTGCCGGGTGGCGATTAACTCC]
[+] EMBL BM601921 [CCGCGAAGGTGAACACGATCCGCACCTCCCGGGCGCAGAACAAGCTGAATGAGCTGGCCCAGCGGCCCGACTTCCTCGCGAACGATCCGTTCAAGCTGCCCACGTTCCGGTTCCTGCCCAAGTCTATCAGTCTCTGCAACGAAGATTCGGTGTTCAAGGAGAACTATACGAAGTTTTGCGATCGTAACGCGTCTGGCAGGTTATCGCGCGAACAATCGCAGGAGACGACGGTAAGCGAAAAGATAGATACAGTCGGTACAATTGTACGCAAGAAGTCGACCACGTCGTCAACGACAAAGAAGAAAAAAGATCCAGAAGGAGCGGCCACGGCGACGACGACGACCACAACCACTACGACCTTCTCGAGTACACCCTCGGGAAAGATCGCTTCCACTACTACGGTGCGCAAAACGATCGTTAAACAGCAGAAGATTGTAGTGGAAGATGCGAGTTCGAGTGTGACAACTGTCGGGACCTCCGAGAGCAGCAGATCGAGATCGATCGCACCAACCAAGAGTCTCGATGTGTCATCATCGTCAACGGCATTGGACAGCAGCAAGTTAACGCATTCGGCTTCGATCAAAGCGTACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGTGCCGGGTGGCGATTAACTCC]
consensusID : consensus_8958#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 639 fasta sequence
[GCGGCAAAATTCCTTGGGAGTCGTAGGAAGAGCCATTTGAACGTTGATCATCAGCACAGCTCGCCCAGCTATCGATTTTAGTGCCGTCGCTTCAAAACAAATCAATCCTGGCTGGGCAAAGGCATGCGAATGTCAAGGGATTCAAGGATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGATTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAAGATCGCCGCCTACCTGGGCGACGTGCTGGAGGACCAGCGCGACAAGCTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGCTTCCAGTGGGATTTGGCCAAGTATCCGACGAAGCAGTCGCTGCGCAACATTGCCGACATCATTTCCAAACAAGTCGGACAGATCGACGCGGATCTGAAGACGAAATCGGCCGCGTACAACAATCTGAAGGGCAACCTGCAGAACCTGGAGAAGAAGCAA]
[+] EMBL BX603073 [GCGGCAAAATTCCTTGGGAGTCGTAGGAAGAGCCATTTGAACGTTGATCATCAGCACAGCTCGCCCAGCTATCGATTTTAGTGCCGTCGCTTCAAAACAAATCAATCCTGGCTGGGCAAAGGCATGCGAATGTCAAGGGATTCAAGGATCCACCGATAAGCGTCCACAATGACCGAATACTGGTTAATATCCGCACCGGGCGACAAGACATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTGAAAACTTCAAGTTTCACATCCCGGACCTGAAGGTCGGTACGCTCGATCAGCTGGTCGGACTGTCCGATGATTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAAGATCGCCGCCTACCTGGGCGACGTGCTGGAGGACCAGCGCGACAAGCTGTACGAGAACTTGCAGGCCAACAACAATGACCTGACCTCGTACATCACCCGCTTCCAGTGGGATTTGGCCAAGTATCCGACGAAGCAGTCGCTGCGCAACATTGCCGACATCATTTCCAAACAAGTCGGACAGATCGACGCGGATCTGAAGACGAAATCGGCCGCGTACAACAATCTGAAGGGCAACCTGCAGAACCTGGAGAAGAAGCAA]
consensusID : consensus_8958#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 550 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGGCAATCACGTGAATACGTTGTAATGGTGGAGAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTGGTTCGGCTGCAATCTCCGGACCGTCTCTCGCGAGCGCGTACACATCCTTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGGTGAGTCTACTGCGAATCCGTGGCTGGTGGTGGTGGGTCTGGTTGGAGGGTGACCGCACGAGTGGAACGATCCGTTTCCCCCCCGAATGTCCCCATGGGGCAGTGTGTAACGAAACCATTGCAAAAGTGTTTTAGGACGACGAATCCCGACGACGGGCGCAAGGAAGAGCGAACCCCGCAAGGGGGTGCAATGAAAATCGATAATGCTTGCTTCCCCGTGTCAAGCACGGGGATAGTCCTTATGGAGATGGTGGTGGAAAATGGAGC]
[+] EMBL BM598377 [CCGCGGACGCGTGGGCGGACGCGTGGGGCAATCACGTGAATACGTTGTAATGGTGGAGAAGAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGTTCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCGGATTTGCTGCAACGCTACACGTTCGACCAGACGGATTTGGTTCGGCTGCAATCTCCGGACCGTCTCTCGCGAGCGCGTACACATCCTTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGGTGAGTCTACTGCGAATCCGTGGCTGGTGGTGGTGGGTCTGGTTGGAGGGTGACCGCACGAGTGGAACGATCCGTTTCCCCCCCGAATGTCCCCATGGGGCAGTGTGTAACGAAACCATTGCAAAAGTGTTTTAGGACGACGAATCCCGACGACGGGCGCAAGGAAGAGCGAACCCCGCAAGGGGGTGCAATGAAAATCGATAATGCTTGCTTCCCCGTGTCAAGCACGGGGATAGTCCTTATGGAGATGGTGGTGGAAAATGGAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8958#3 ------------------------------------------------------------
consensus_8958#5 ------------------------------------------------------------
consensus_8958#1 --------------CCGCGCACCGAAAGCAATCACGTGAATACGTTGTAATGGTGGAGAA 46
consensus_8958#6 CCGCGGACGCGTGGGCGGACGCGTGGGGCAATCACGTGAATACGTTGTAATGGTGGAGAA 60
consensus_8958#0 ---------------------------------------------------------GAA 3
consensus_8958#2 ------------------------------------------------------------
consensus_8958#4 --CCGCGAAGGTGAACACGATCCGCACCTCCCGGGCGCAGAACAAGCTGAATGAGCTGGC 58
consensus_8958#3 ---------------------------------------CCGCCCACGCGTCCGGCCCGT 21
consensus_8958#5 ------------------------------------------------------------
consensus_8958#1 GAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGT 106
consensus_8958#6 GAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGT 120
consensus_8958#0 GAGAAGATCCGCTGCCGTTGTTGGTGTTCTTGCCTGAGAGCTCCCGTGCCTTGTGCCCGT 63
consensus_8958#2 -------------------------------------CCGCGGACGCGTGGGT-CCTGCC 22
consensus_8958#4 CCAGCGGCCCGACTTCCTCGCGAACGATCCGTTCAAGCTGCCCACGTTCCGGTTCCTGCC 118
consensus_8958#3 TCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCG--GATTTGCTGCAACGCTA 79
consensus_8958#5 --------------GCGGCAAAATTCCTTGGGAGTCGTAGGAAGAGCCATTTGAACGTTG 46
consensus_8958#1 TCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCG--GATTTGCTGCAACGCTA 164
consensus_8958#6 TCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCG--GATTTGCTGCAACGCTA 178
consensus_8958#0 TCGATCTAGGATTTTCCCCGCTGTGCCGTGTGTGTTTCGCG--GATTTGCTGCAACGCTA 121
consensus_8958#2 CAAGTCTATCAGTCTCTGCAACGAAGATTCGGTGTTCAAGGAGAACTATACGAAGTTTTG 82
consensus_8958#4 CAAGTCTATCAGTCTCTGCAACGAAGATTCGGTGTTCAAGGAGAACTATACGAAGTTTTG 178
* * * * ** * * * *
consensus_8958#3 CACGTTCGACCAGACGGATT--TTGGTTCGGCTGCAATCTCCGGGACCGTCTCTC-GCGA 136
consensus_8958#5 ATCATCAGCACAG---------CTCGCCCAGCTATCGATTTTAGTGCCGTCGCTT-CAAA 96
consensus_8958#1 CACGTTCGACCAGACGGATT--TTGGTTCGGCTGCAATCTCCGGGACCGTCTCTC-GCGA 221
consensus_8958#6 CACGTTCGACCAGACGGAT---TTGGTTCGGCTGCAATCTCCGG-ACCGTCTCTC-GCGA 233
consensus_8958#0 CACGTTCGACCAGACGGATT--TTGGTTCGGCTGCAATCTCCGGGACCGTCTCTC-GCGA 178
consensus_8958#2 CGATCGTAACGCGTCTGGCAGGTTATCGCGCGAACAATCGCAGGAGACGACGGTAAGCGA 142
consensus_8958#4 CGATCGTAACGCGTCTGGCAGGTTATCGCGCGAACAATCGCAGGAGACGACGGTAAGCGA 238
* * * * ** * * *
consensus_8958#3 GCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCC-CAT 195
consensus_8958#5 ------ACAAATCAATCCTGGCTGGGCAAAGGCATGCGAATGTCAAGGGATTCAAG-GAT 149
consensus_8958#1 GCGCGTACACATCCGTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGGATCCC-CAT 280
consensus_8958#6 GCGCGTACACATCCTTCGTCGCTGTTCTTGGTTGGCCATTGGAAAAGAGGGTGAGT-CTA 292
consensus_8958#0 GCGCGTACACATCCGTCGTCGCTTTTCTTGGTTGGCCATTGGAAAAGAGGGATCCC-CAT 237
consensus_8958#2 AAAGATAGATA-CAGTCGGTACAATTGTACGCAAGAAGTCGACCACGTCGTCAACGGCAA 201
consensus_8958#4 AAAGATAGATA-CAGTCGGTACAATTGTACGCAAGAAGTCGACCACGTCGTCAACGACAA 297
* * * * ** * * * *
consensus_8958#3 CCACCGATAAGCGTCCACAATGACCGAATACTG-GTTAATATCCGCACCGGGCGACAAGA 254
consensus_8958#5 CCACCGATAAGCGTCCACAATGACCGAATACTG-GTTAATATCCGCACCGGGCGACAAGA 208
consensus_8958#1 CCACCGATAAGCGTCCACAATGACCGAATACTG-GTTAATATCCGCACCGGGCGACAAGA 339
consensus_8958#6 CTGCGAATCCGTGGCTGGTGGTGGTGGGT-CTG-GTTGGAGGGTG-ACCGCACGAGTGGA 349
consensus_8958#0 CCACCGATAAGCGTCCACAATGACCAAATTCCGCGTCAATCAGCTCAGCAGTCGA---GA 294
consensus_8958#2 AGAAGAAAAAAGATCCAGAAGGAGCGGCCACGGCGACGACGACGACCACAACCACTACGA 261
consensus_8958#4 AGAAGAAAAAAGATCCAGAAGGAGCGGCCACGGCGACGACGACGACCACAACCACTACGA 357
* * * * * * * **
consensus_8958#3 CATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTG 314
consensus_8958#5 CATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTG 268
consensus_8958#1 CATGCCAGCAGACCTGGGAAACGATGAACAACGTTACCAGCAAGCAGAACAATCTGTGTG 399
consensus_8958#6 ACGATCCGTTTCCCCCCCGAATGTCCCCATGGGGCAGTGTGTAACGAAACCAT-TGCAAA 408
consensus_8958#0 TGTGCCGGTGGCGATTAACTCCGTCGCACGGCGCTATC-TCGAACGGAGTGGTATACAGG 353
consensus_8958#2 CCTTCTCGAGTAC------ACCCTCGGGAAAGATCGCT-TCCACTACTACGGTGCGCAAA 314
consensus_8958#4 CCTTCTCGAGTAC------ACCCTCGGGAAAGATCGCT-TCCACTACTACGGTGCGCAAA 410
* * *
consensus_8958#3 AAAACTTCAAGTTT-CACATCCCGGACCTGAAGGT-CGGTACGCTCGATCAGCT--GGTC 370
consensus_8958#5 AAAACTTCAAGTTT-CACATCCCGGACCTGAAGGT-CGGTACGCTCGATCAGCT--GGTC 324
consensus_8958#1 AAAACTTCAAGTTT-CACATCCCGGACCTGAAGGT-CGGTACGCTCGATCAGCT--GGTC 455
consensus_8958#6 AGTGTTTTAGGACGACGAATCCCGACGACGGGCGC-AAGGAAGAGCGAAC--CC--CGCA 463
consensus_8958#0 ATGATCTTTCCACGTCGGCCGCCAGACTGCCCCGTACGCTCAGCCCCACCGGCCCGGGTC 413
consensus_8958#2 ACGATCGTTAAACAGCAGAAGATTGTAGTGGAAGATGCGAGTTCGAGTGTGACAACTGTC 374
consensus_8958#4 ACGATCGTTAAACAGCAGAAGATTGTAGTGGAAGATGCGAGTTCGAGTGTGACAACTGTC 470
* * * * *
consensus_8958#3 GGACT--GTCCGATGATTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAAGA 428
consensus_8958#5 GGACT--GTCCGATGATTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAAGA 382
consensus_8958#1 GGACT--GTCCGATGATTTGGGCAAGCTGGACGGGTACGTCGAGCAGACGACGCGCAAGA 513
consensus_8958#6 AGGGG--GTGCAATGA-------AAATCGATAATGCTTGCTTCCCCG-TGTCAAGCACGG 513
consensus_8958#0 AGACCACGCTCGACGACACGGTGACGGTGAACA-ATCTGCGCAACAG-TGCGCTACGACT 471
consensus_8958#2 GGGAC--CTCCGA-GAGCAGCAGATCGAGATCGATCGCACCAACCAAGAGTCTCGATGTG 431
consensus_8958#4 GGGAC--CTCCGA-GAGCAGCAGATCGAGATCGATCGCACCAACCAAGAGTCTCGATGTG 527
* * * ** * * * *
consensus_8958#3 TCGCCGCCTACCTGGGCGACGTGCTG--GAGGACCAGCGCGACAAGTTGTACGAGAACT- 485
consensus_8958#5 TCGCCGCCTACCTGGGCGACGTGCTG--GAGGACCAGCGCGACAAGCTGTACGAGAACT- 439
consensus_8958#1 TCGCCGCCTATCTGGGCGACGTGCTG--GAGGACCAGCGCGACAAGCTGTACGAGAACT- 570
consensus_8958#6 GGATAGTCCTTATGGAGATGGTGGTG--GAAAAT-GGAGC-------------------- 550
consensus_8958#0 GCGCAGCTCGGTTT--CGGTGGACTG--GGATGCGATGGAGGCGGTCGAAAATCGATCGA 527
consensus_8958#2 TCATCATCGTCAACGGCATTGGACAGCAGCAAGTTAACGCATTCGGCTTCGATCAA-GCG 490
consensus_8958#4 TCATCATCGTCAACGGCATTGGACAGCAGCAAGTTAACGCATTCGGCTTCGATCAAAGCG 587
* * * *
consensus_8958#3 TGC--AGGCCAACAACAATGACCTGACCTCGTACATCA---CCCGCTT-CCAGTGGGATT 539
consensus_8958#5 TGC--AGGCCAACAACAATGACCTGACCTCGTACATCA---CCCGCTT-CCAGTGGGATT 493
consensus_8958#1 TGC--AGGCCAACAACAATGACCTGACCTCGTACATCA---CCCGCTTTCCAGTGGGATT 625
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 TGA--AGACGATCAACACCTTCCTGAAGCGGCACGCCGTAGCCAGTTCGGCCGTGAAACA 585
consensus_8958#2 TACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGT--GCCGG-TGGCGATTAACTC 547
consensus_8958#4 TACCAAATTCCGCGTCAATCAGCTCAGCAGTCGAGATGT--GCCGGGTGGCGATTAACTC 645
consensus_8958#3 TGGCCAAGTATCCGACGAAGCAGTCGCTGC---------GCAACATTGCCGACATCATTT 590
consensus_8958#5 TGGCCAAGTATCCGACGAAGCAGTCGCTGC---------GCAACATTGCCGACATCATTT 544
consensus_8958#1 TGGCCAAGTATCCGACGAAGCAGTCGCTGC---------GCAACATTGCCGACATCATTT 676
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 GATCCAAGCACAGCTAGAGGCAACCATTACAACGCACAAGTAGGATAGACGGATTCCTCT 645
consensus_8958#2 CGTCGCACGGCGCTATCTCGAACGGAGTGGTATACA-GGATGATCTTTCCACGTCGGCCG 606
consensus_8958#4 C----------------------------------------------------------- 646
consensus_8958#3 CCAAGCAAGTCGGACAGATCGACGCGGATCTGAAGACGAAATCGGCCGCGTACAACAATC 650
consensus_8958#5 CCAAACAAGTCGGACAGATCGACGCGGATCTGAAGACGAAATCGGCCGCGTACAACAATC 604
consensus_8958#1 CCAAACAAGTCGGACAAATCGACGCGG--------------------------------- 703
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 GCTCACAATCAGGGTGTTTGAGGGTGTTCGATAGCAATGAGATGATTGTACATACAATAC 705
consensus_8958#2 CCAGACTGCCCCGTACGCTCAGCCCCACCGGCCCGGGTCAGACCACGCTCGACGACACGG 666
consensus_8958#4 ------------------------------------------------------------
consensus_8958#3 TGAAGGGCAACCTGCAGAACTTGGAGAAGAA----------------------------- 681
consensus_8958#5 TGAAGGGCAACCTGCAGAACCTGGAGAAGAAGCAA------------------------- 639
consensus_8958#1 ------------------------------------------------------------
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 GCACCCTCTTTTCTATACGCCATGTGTATTTATACGTAGCTTTACTTATCGGTGATGTAA 765
consensus_8958#2 TGACGGTGAACAATCTGCGCAACAGTGCGCT----------------------------- 697
consensus_8958#4 ------------------------------------------------------------
consensus_8958#3 ------------------------------------------------------------
consensus_8958#5 ------------------------------------------------------------
consensus_8958#1 ------------------------------------------------------------
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 GCAGTAGCGAAGCGATGCAGTTTCAGTGTTAGCATATTTTTGTATAGATTACACACGATC 825
consensus_8958#2 ------------------------------------------------------------
consensus_8958#4 ------------------------------------------------------------
consensus_8958#3 ------------------------------------------------------------
consensus_8958#5 ------------------------------------------------------------
consensus_8958#1 ------------------------------------------------------------
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 GTAGGAGGTAATGGTTATAGAGAAAAGAAGAGGAAAGGCACAGTACGCTGTAGTGCCTTA 885
consensus_8958#2 ------------------------------------------------------------
consensus_8958#4 ------------------------------------------------------------
consensus_8958#3 ------------------------------------------------------------
consensus_8958#5 ------------------------------------------------------------
consensus_8958#1 ------------------------------------------------------------
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 TCGCACCAAGTGTGATTAGGTAGAGAGTATGTAGCTTACAATTCAAAGTGAATCACAAAA 945
consensus_8958#2 ------------------------------------------------------------
consensus_8958#4 ------------------------------------------------------------
consensus_8958#3 ------------------------------------------------------------
consensus_8958#5 ------------------------------------------------------------
consensus_8958#1 ------------------------------------------------------------
consensus_8958#6 ------------------------------------------------------------
consensus_8958#0 GATGGGAATAAAATGCAGAGAGAATTCTGATACTCTACGCTATCTTCGTAAGGGGTACGT 1005
consensus_8958#2 ------------------------------------------------------------
consensus_8958#4 ------------------------------------------------------------
consensus_8958#3 ----------------
consensus_8958#5 ----------------
consensus_8958#1 ----------------
consensus_8958#6 ----------------
consensus_8958#0 CAATGTTGCTCTGTAA 1021
consensus_8958#2 ----------------
consensus_8958#4 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||