These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8962#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1545 fasta sequence [CCGATGGAAACTGCGTGCCGGAGCCGGACGCCGGAACGATCGAGGACGTATTTGACCCCAAGCCGGAATCGTTCGATGAGCGGAACGAACAGACGGGCAGCCCGCCGCTCAGCATCTGCAGCGTGCGCTCCGAGGATTCGGGCAAGGGTTCGAGCCCGCCCCACTCGGTCGGCCCGTCCGTCACGACGTACGAGTTCCTGGTGCCCGCGTTCCTGGTGGCCGGCATGCTCGGCAAGCAGGGCACGTTCGTGAAGCAGATCAAGCAGAAAACCGGCGCTAACGTCATCATCAAGCGCAACCCGGACACACACAACAGCAAGATCTGCACGCTCGAAGGCTCGCAGCAGGAAATTCAGGACGCGCTAGCGGTGATTCGCAAGAAGTTCCCGCAGAAACGGTTTCCCGGCCTGACCCTGCAGCGGATTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAGCTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTACGGCGGCTACTCGATGCTGCCCCCACAGAACCTTCGTCAAATCAGAACAGATTTCATCTCCGTACCGTTCCAATCGATAGAGTGTGTGCTATCCAACATTCAGCCGATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGTTGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAATTATTAACAAATTTAAAAATGCATATTATAAGGAAAAAAGAAACAGTGAGATTGAAGATAGTGAGCTCGTGCTACGGAAAGCATGATAAATGGAAAGCTAAAACGGGGGAGACTGAGCGAGGCGCAGTACTGCCAACGGTGTCAGCGGACGGGTGCAGCCCGGTTTGCTGGTGGTGATATTAAAGGCGCGGGAAAGGACGTGGATATAGTAACGCATTCATGCAACGGGCAATGGCGGACAATTGAGAGGCACCACCCCGTACCTCACAGCATTTCGGACAACACTTAACAACTAAAACTACCGCCCGGCTAGGCTTCCGGTTCACTCTCACCCCTTCTCTCCCGCACACGCTCTACTACATTAGTATCCAGTTTTGGGTACGCTGCACCGGAACCAAACATAACAGCTCTCGTGCGCGTGTACTCATTCAACCACGGTT] [+] EMBL BM589763 [CCGATGGAAACTGCGTGCCGGAGCCGGACGCCGGAACGATCGAGGACGTATTTGACCCCAAGCCGGAATCGTTCGATGAGCGGAACGAACAGACGGGCAGCCCGCCGCTCAGCATCTGCAGCGTGCGCTCCGAGGATTCGGGCAAGGGTTCGAGCCCGCCCCACTCGGTCGGCCCGTCCGTCACGACGTACGAGTTCCTGGTGCCCGCGTTCCTGGTGGCCGGCATGCTCGGCAAGCAGGGCACGTTCGTGAAGCAGATCAAGCAGAAAACCGGCGCTAACGTCATCATCAAGCGCAACCCGGACACACACAACAGCAAGATCTGCACGCTCGAAGGCTCGCAGCAGGAAATTCAGGACGCGCTAGCGGTGATTCGCAAGAAGTTCCCGCAGAAACGGTTTCCCGGCCTGACCCTGCAGCGGATTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAGCTGGTACCGGGCGCA ] [+] EMBL BM638225 [ ccgccCACGCGTCCG GCCCGCCCCACTCGGTCGGCCCGTCCGTCACGACGTACGAGTTCCTGGTGCCCGCGTTCCTGGTGGCCGGCATGCTCGGCAAGCAGGGCACGTTCGTGAAGCAGATCAAGCAGAAAACCGGCGCTAACGTCATCATCAAGCGCAACCCGGACACACACAACAGCAAGATCTGCACGCTCGAAGGCTCGCAGCAGGAAATTCAGGACGCGCTAGCGGTGATTCGCAAGAAGTTCCCGCAGAAACGGTTTCCCGGCCTGACCCTGCAGCGGATTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAGCTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTACGGCGGCTACTCGATGCTGCCCCCACAGA ] [+] EMBL BM578034 [ ccgGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAGCTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTACGGCGGCTACTCGATGCTGCCCCCACAGAACCTTCGTCAAATCAGAACAGATTTCATCTCCGTACCGTTCCAATCGATAGAGTGTGTGCTATCCAACATTCAGCCGATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGTTGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAATTATTAACAAATTTAAAAATGCATATTATAAGGAAAAAAGAAACAGTGAGATTGAAGATAGTGAGCTCGTGCTACGGAAAGCATGATAAATGGAAAGCTAAAACGGGGGAGACTGAGCGAGGCGCAGTACTGCCAACGGTGTCAGCGGACGGGTGCAGCCCGGTTTGCTGGTGGTGATATTAAAGGCGCGGGAA ] [-] EMBL AGA280205 [ AGAACAGATTTCATCTCCGTACCGTTCCAATCGATAGAGTGTGTGCTATCCAACATTCAGCCGATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGTTGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAATTATTAACAAATTTAAAAATGCATATTATAAGGAAAAAAaa ] [+] EMBL BM595438 [ ccgCCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGTTGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAATTATTAACAAATTTAAAAATGCATATTATAAGGAAAAAAGAAACAGTGAGATTGAAGATAGTGAGCTCGTGCTACGGAAAGCATGATAAATGGAAAGCTAAAACGGGGGAGACTGAGCGAGGCGCAGTACTGCCAACGGTGTCAGCGGACGGGTGCAGCCCGGTTTGCTGGTGGTGATATTAAGGGCGCGGGAAAGGACGTGGATATAGTAACGCATTCATGCAACGGGCAATGGCGGACAATTGAGAGGCACCACCCCGTACCTCACAGCATTTCGGACAACACTTAACAACTAAAACTACCGCCCGGCTAGGCTTCCGGTTCACTCTCACCCCTTCTCTCCCGCACACGCTCTACTACATTAGTATCCAGTTTTGGGTACGCTGCACCGGAACCAAACATAACAGCTCTCGTGCGCGTGTACTCATTCAACCACGGTT] consensusID : consensus_8962#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 695 fasta sequence [CCGCCCACGCGTCCGAGGACGCGCTAGCGGTGATTCGCAAGAAGTTCCCGCAGAAACGGTTTCCCGGCCTGACCCTGCAGCGGA-TTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAG-CTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTACGGCGGCTACTCGATGCTGCCCCCACAGAACCTTCGTCAAATCAGAACAGATTTCATCTCCGTACCGTTCCAATCGATAGAGTGTGTGCTATCCAACATTCAGCCGATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAAT] [+] EMBL BM616385 [CCGCCCACGCGTCCGAGGACGCGCTAGCGGTGATTCGCAAGAAGTTCCCGCAGAAACGGTTTCCCGGCCTGACCCTGCAGCGGA TTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAG CTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTACGGCGGCTACTCGATGCTGCCCCCACAGAACCTTCGTCAAATCAGAACAGATTTCATCTCCGTACCGTTCCAATCGATAGAGTGTGTGCTATCCAACATTCAGCCGATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAAT] [+] EMBL BX466110 [ CAAGAA T CCGCACGANNG TNCCGGCCTGACCCTGCAGCGGACTTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAGACTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTAC ] [+] EMBL BX602345 [ CCGCAAAAACGGTTTCCCGGCCTGACCCTGCAGCGGA TTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGC ] consensusID : consensus_8962#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 681 fasta sequence [CCGTTTCTTCCGCTTCGTACCATTTCAGCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAGCTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTACGGCGGCTACTCGATGCTGCCCCCACAGAACCTTCGTCAAATCAGAACAGATTTCATCTCCGTACCGTTCCAATCGATAGAGTGTGTGCTATCCAACATTCAGCCGATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGTTGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAATTATTAACAAATTTTAAAATGCATATTATAAGG] [+] EMBL BM613524 [CCGTTTCTTCCGCTTCGTACCATTTCAGCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGAGCGAGGCCCCCGCCCTGCCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGTTCGTCGCGGGCAGCTGGTACCGGGCGCAGGTCGTGCAGAACGTCACGGAAAGCAATTTGGTTTTAGTGAAATACCTGGACTACGGCGGCTACTCGATGCTGCCCCCACAGAACCTTCGTCAAATCAGAACAGATTTCATCTCCGTACCGTTCCAATCGATAGAGTGTGTGCTATCCAACATTCAGCCGATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGTTAACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGAAATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGTTGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAATTATTAACAAATTTTAAAATGCATATTATAAGG] consensusID : consensus_8962#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence [CAGAATNCCCCGAGGTTANGCCTGACCTGCAGCGGATTGAGATTATCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCAACCAACTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGATGCGAGGCCCCCGGCCTGGCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGCTACGTCAGCAGGGCAGCTGGTACCTGGGACGCAGGTCGTGCAGAACGTCACCGGACAAGCAATATNAGGAATANATAGTGAAATACCTGGACTACGGCGGNGTACTCGATTGCTGCNCNCCCACAGAACCTTCGTCGAAATCAGGAACACGATTTCATCTCCGTACACGTATCCAATCGATAGAGTGTGTGCCTATCCAACCATTCAGGCCCGAATTGATGAACAGCCAAANACACCCTTGGTTCNGGAAGTGAAAGACCAACGAGGATGTANCCAGTAAGCGTTTAACCAAGCNCAATGCCTACTC] [+] EMBL AL929817 [CAGAATNCCCCGAGGTTANGCCTGACCTGCAGCGGATTGAGATTATCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTTCGAGCCTGCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACGTGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCAACCAACTGACCCTGAACAGCATGCAGAACTCACTGAATCAAAGCTACACCCAGATGCGAGGCCCCCGGCCTGGCCGAGATCGTGCCGAATGCGGTCTGCGTTGCGCTACGTCAGCAGGGCAGCTGGTACCTGGGACGCAGGTCGTGCAGAACGTCACCGGACAAGCAATATNAGGAATANATAGTGAAATACCTGGACTACGGCGGNGTACTCGATTGCTGCNCNCCCACAGAACCTTCGTCGAAATCAGGAACACGATTTCATCTCCGTACACGTATCCAATCGATAGAGTGTGTGCCTATCCAACCATTCAGGCCCGAATTGATGAACAGCCAAANACACCCTTGGTTCNGGAAGTGAAAGACCAACGAGGATGTANCCAGTAAGCGTTTAACCAAGCNCAATGCCTACTC] consensusID : consensus_8962#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 543 fasta sequence [TNCCCCCGAGGTTTAAANATGGTTGCACGCGGATACNCCAGATGGATTGACTGACACTTGTATGTACGCNAAGTAGGTGAACNACATTATTCAACAACATTTANAACAATGCATATTATAAGGAAAAAAGAAACAGTGAGATTGAAGATACGTGAGCTCGTGCTACGGAAAGCATGATAAATGGAACAGCTAAAACGGGGTGAGACTGAGCGAGGCGCAGTACTGNCAACGGTGTCAGCGGACGNGGTGCAGCCCGGTTNTGCTGGTGGTGATATTAAGCGGCGCGTGGNAAAGTGACGTGGATATGGAAATGCATCGATGCAACGGGCAATGGCGGACAATTGAGAGGCACCAACCCGTACCTCACAGCATTTCGGACAACACTTTAACAACTAAAACTACCGCCGGCTATGCTTCCGGTTCACTCTCACCCTTCTCTCCCGNACACGCTCTACTACATTAGTATCCATNTAAGGGTACGCTGCACCGGAACCAAACATAACAGCTACTCGTGCGCGTGTACTCATTCAACCACGGTNCTCC] [+] EMBL AL934516 [TNCCCCCGAGGTTTAAANATGGTTGCACGCGGATACNCCAGATGGATTGACTGACACTTGTATGTACGCNAAGTAGGTGAACNACATTATTCAACAACATTTANAACAATGCATATTATAAGGAAAAAAGAAACAGTGAGATTGAAGATACGTGAGCTCGTGCTACGGAAAGCATGATAAATGGAACAGCTAAAACGGGGTGAGACTGAGCGAGGCGCAGTACTGNCAACGGTGTCAGCGGACGNGGTGCAGCCCGGTTNTGCTGGTGGTGATATTAAGCGGCGCGTGGNAAAGTGACGTGGATATGGAAATGCATCGATGCAACGGGCAATGGCGGACAATTGAGAGGCACCAACCCGTACCTCACAGCATTTCGGACAACACTTTAACAACTAAAACTACCGCCGGCTATGCTTCCGGTTCACTCTCACCCTTCTCTCCCGNACACGCTCTACTACATTAGTATCCATNTAAGGGTACGCTGCACCGGAACCAAACATAACAGCTACTCGTGCGCGTGTACTCATTCAACCACGGTNCTCC] consensusID : consensus_8962#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 344 fasta sequence [ATACAGCCGATGGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTACCGTAGGGTAACAAGCAAGGCTATCATGCAAGCACAAGTAGCGGGATATACGGCCGAGGGTATACCGGAAATAAATCTAGGCACTACAATAGCAAAAGAAAACGTAGTGAACATAAATCAAGAAAGGGTGGCACGCGGATACGCCAGAAGGATGGACTGAATAGTATGTATGCAAAGTAGGGGAACAAATAATAAACAAATCCAAAAATGCATAAGACAAGGAAAAAAGAAACAGTGAGATTGAAGAAAGTGAGCTCGTGCTACGGAAAGCATGATAAACGGAAAGCT] [+] EMBL BX613143 [ATACAGCCGATGGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTACCGTAGGGTAACAAGCAAGGCTATCATGCAAGCACAAGTAGCGGGATATACGGCCGAGGGTATACCGGAAATAAATCTAGGCACTACAATAGCAAAAGAAAACGTAGTGAACATAAATCAAGAAAGGGTGGCACGCGGATACGCCAGAAGGATGGACTGAATAGTATGTATGCAAAGTAGGGGAACAAATAATAAACAAATCCAAAAATGCATAAGACAAGGAAAAAAGAAACAGTGAGATTGAAGAAAGTGAGCTCGTGCTACGGAAAGCATGATAAACGGAAAGCT] consensusID : consensus_8962#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 120 fasta sequence [TGGCAGGTGTGGGACGCGAAAAAAAAGGAAAACCGTGGTTGGATGAGTACACGCGCACGAAATCTTTTATTTTTGGTTCCGGTGCAGCATACCCAAAAATGGATACTAATGTAGTAGAGC] [+] EMBL CNS090E4 [TGGCAGGTGTGGGACGCGAAAAAAAAGGAAAACCGTGGTTGGATGAGTACACGCGCACGAAATCTTTTATTTTTGGTTCCGGTGCAGCATACCCAAAAATGGATACTAATGTAGTAGAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 CCGATGGAAACTGCGTGCCGGAGCCGGACGCCGGAACGATCGAGGACGTATTTGACCCCA 60 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 AGCCGGAATCGTTCGATGAGCGGAACGAACAGACGGGCAGCCCGCCGCTCAGCATCTGCA 120 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 GCGTGCGCTCCGAGGATTCGGGCAAGGGTTCGAGCCCGCCCCACTCGGTCGGCCCGTCCG 180 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 TCACGACGTACGAGTTCCTGGTGCCCGCGTTCCTGGTGGCCGGCATGCTCGGCAAGCAGG 240 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 GCACGTTCGTGAAGCAGATCAAGCAGAAAACCGGCGCTAACGTCATCATCAAGCGCAACC 300 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ---------------------------------------CCGCCCACGCGTCCGAGGACG 21 consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 CGGACACACACAACAGCAAGATCTGCACGCTCGAAGGCTCGCAGCAGGAAATTCAGGACG 360 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 CGCTAGCGGTGATTCGCAAGAAGTTCCCGCAGAAACGGTTTCCCGGCCTGACCCTGCAGC 81 consensus_8962#3 -----------------CAGAATNCCCCGAGG---------TTANGCCTGACC-TGCAGC 33 consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 CGCTAGCGGTGATTCGCAAGAAGTTCCCGCAGAAACGGTTTCCCGGCCTGACCCTGCAGC 420 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ---------------------------------------------------TNCCCCCGA 9 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 GGATTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTT 141 consensus_8962#3 GGATTGAGATTA-TCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTT 92 consensus_8962#2 -----------------------------------CCGTTTCTTCCGCTTCGTACCATTT 25 consensus_8962#0 GGATTGAGATTAGCCGCGTCGAAACGGTCATACCGCTGTCGCTGATGAATGACACGTGTT 480 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 GGTTTAAANATGGTTGCACGCGGATACNCCAGATGGATTGACTGACACTTGTATGTACGC 69 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 CGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACG 201 consensus_8962#3 CGAGCCTGC-GCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACG 151 consensus_8962#2 CAG--CTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACG 83 consensus_8962#0 CGAGCCTGCCGCTGGTGGAGGGAATCAACAATGACGTCGCCGTTAGCTGCATCATCAACG 540 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 NAAGTAGGTGAACNACATTATTCAACAACATTTANAACAATGCATATTATAAGGAAAAAA 129 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 TGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGC 261 consensus_8962#3 TGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCAACCAACTGACCCTGAACAGCATGC 211 consensus_8962#2 TGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGC 143 consensus_8962#0 TGGGCCACCTGTTCGTGCACCAGCCGCTGCACCCCACCCACCTGACCCTGAACAGCATGC 600 consensus_8962#5 --------------------------------------------------------ATAC 4 consensus_8962#4 GAAACAGTGAGATTGAAGATACGTGAGCTCGTGCTACGGAAAGCATGATAAATGGAACAG 189 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 AGAACTCACTGAATCAAAGCTA---CACCCAGA---GCGAGGCCCCCGCCCTGCCCGAGA 315 consensus_8962#3 AGAACTCACTGAATCAAAGCTA---CACCCAGAT--GCGAGGCCCCCGGCCTGGCCGAGA 266 consensus_8962#2 AGAACTCACTGAATCAAAGCTA---CACCCAGA---GCGAGGCCCCCGCCCTGCCCGAGA 197 consensus_8962#0 AGAACTCACTGAATCAAAGCTA---CACCCAGA---GCGAGGCCCCCGCCCTGCCCGAGA 654 consensus_8962#5 AG---CCGATGGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTACCGTA 61 consensus_8962#4 CTAA--AACGGGGTGAGAC-TGAGCGAGGCGCA---GTACTGNCAACGGTGTCAGCGGAC 243 consensus_8962#6 -TGG--CA-GGTGTGGGACGCGAAAAAAAAGGA---AAACCGTGGTTGG-ATGAGTACAC 52 * * * * * * * consensus_8962#1 TCGTGCCGAATGCGGTCTGCGTTGCGTT-CGTCGC--GGGCAGCTGGTACC--GGGCGCA 370 consensus_8962#3 TCGTGCCGAATGCGGTCTGCGTTGCGCTACGTCAGCAGGGCAGCTGGTACCTGGGACGCA 326 consensus_8962#2 TCGTGCCGAATGCGGTCTGCGTTGCGTT-CGTCGC--GGGCAGCTGGTACC--GGGCGCA 252 consensus_8962#0 TCGTGCCGAATGCGGTCTGCGTTGCGTT-CGTCGC--GGGCAGCTGGTACC--GGGCGCA 709 consensus_8962#5 GGGTAACAAGCAAGG-CTATCATGCAAG----CAC--AAGTAGCGGGATATACGGCCG-A 113 consensus_8962#4 GNG-GTGCAGCCCGGTTNTGCTGGTGGTGATATTAAGCGGCGCGTGGNAAAGTG-ACGTG 301 consensus_8962#6 GCGCACGAAATCTTTTATTTTTGGTTCCGGT-----GCAGCATACCCAAAAATGGATACT 107 * * * * * consensus_8962#1 GGTCGTGCAGAACGTCACGGAA---AGCAATTTGGT-----TTTAGTGAAATACCTGGAC 422 consensus_8962#3 GGTCGTGCAGAACGTCACCGGAC-AAGCAATATNAGGAATANATAGTGAAATACCTGGAC 385 consensus_8962#2 GGTCGTGCAGAACGTCACGGAA---AGCAATTTGGT-----TTTAGTGAAATACCTGGAC 304 consensus_8962#0 GGTCGTGCAGAACGTCACGGAA---AGCAATTTGGT-----TTTAGTGAAATACCTGGAC 761 consensus_8962#5 GGGTATACCGGAAATAAATCTA---GGCACTACAAT-----AGCAAAAGAAAACGTAGTG 165 consensus_8962#4 GATATGGAAATGCATCGATGCAACGGGCAATGGCGGACAATTGAGAGGCACCAACCCGTA 361 consensus_8962#6 AATGTAGTAGAGC----------------------------------------------- 120 consensus_8962#1 TACGGCGGC-TACTCGAT-GCTGCCCCC---ACAGAACCTTCGTC-AAATCAG-AACA-G 474 consensus_8962#3 TACGGCGGNGTACTCGATTGCTGCNCNCCC-ACAGAACCTTCGTCGAAATCAGGAACACG 444 consensus_8962#2 TACGGCGGC-TACTCGAT-GCTGCCCCC---ACAGAACCTTCGTC-AAATCAG-AACA-G 356 consensus_8962#0 TACGGCGGC-TACTCGAT-GCTGCCCCC---ACAGAACCTTCGTC-AAATCAG-AACA-G 813 consensus_8962#5 AACATAAAT-CAAGAAAGGGTGGCACGC------GGA--TACGCCAGAAGGATGGACTGA 216 consensus_8962#4 CCTCACAGCATTTCGGACAACACTTTAACAACTAAAACTACCGCCGGCTATGCTTCCGGT 421 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ATTTCATCTCCGTAC-CGT-TCCAATCGATAGAGTGTGTGC-TATCCAAC-ATTCAGCC- 529 consensus_8962#3 ATTTCATCTCCGTACACGTATCCAATCGATAGAGTGTGTGCCTATCCAACCATTCAGGCC 504 consensus_8962#2 ATTTCATCTCCGTAC-CGT-TCCAATCGATAGAGTGTGTGC-TATCCAAC-ATTCAGCC- 411 consensus_8962#0 ATTTCATCTCCGTAC-CGT-TCCAATCGATAGAGTGTGTGC-TATCCAAC-ATTCAGCC- 868 consensus_8962#5 ATAGTATGTATGCAA-AGT---AGGGGAACAAATAATAAACAAATCCAAAAATGCATAA- 271 consensus_8962#4 TCACTCTCACCCTTCTCTCCCGNACACGCTCTACTACATTAGTATCCATNTAAGGGTACG 481 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 --GATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGT-T 586 consensus_8962#3 CGAATTGATGAACAGCCAAANACACCCTTGGTTCNGGAAGTGAAAGACCAACGAGGATGT 564 consensus_8962#2 --GATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGT-T 468 consensus_8962#0 --GATTGATGAAAGCCAAAACACCTGGTCGGAGGAAGCCACCGAGCTGTTCCGTAGGT-T 925 consensus_8962#5 --GACAAGGAAAAAAGAAACAGTGAGATTGAAGAAAGTGAGCTCGTGCTACGGAAAGCAT 329 consensus_8962#4 CTGCACCGGAACCAAACATAACAGCTACTCGTGCGCGTGTACTCATTCAACCACGGTNCT 541 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 AACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGA 646 consensus_8962#3 ANCCAGTAA-GCGTTTAACCAAGCNCAA-TGCCTACTC---------------------- 600 consensus_8962#2 AACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGA 528 consensus_8962#0 AACAAGCAATGCTATCATGCAAGCACAAGTAGCGGGATATACTGCCGAGGGTATTCCGGA 985 consensus_8962#5 GATAAACGGAAAGCT--------------------------------------------- 344 consensus_8962#4 CC---------------------------------------------------------- 543 consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 AATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAAT----------- 695 consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 AATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGT 588 consensus_8962#0 AATTTATCTATTCTCTTCAATAGCAAAAGATAACGTAGTTTTCATTAATCAAGAAATGGT 1045 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 TGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAA 648 consensus_8962#0 TGCACGCGGATACGCCAGATGGATTGACTGAATTGTATGTACGCAAAGTAGGTGAACAAA 1105 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 TTATTAACAAATTTTAAAATGCATATTATAAGG--------------------------- 681 consensus_8962#0 TTATTAACAAATTTAAAAATGCATATTATAAGGAAAAAAGAAACAGTGAGATTGAAGATA 1165 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 GTGAGCTCGTGCTACGGAAAGCATGATAAATGGAAAGCTAAAACGGGGGAGACTGAGCGA 1225 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 GGCGCAGTACTGCCAACGGTGTCAGCGGACGGGTGCAGCCCGGTTTGCTGGTGGTGATAT 1285 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 TAAAGGCGCGGGAAAGGACGTGGATATAGTAACGCATTCATGCAACGGGCAATGGCGGAC 1345 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 AATTGAGAGGCACCACCCCGTACCTCACAGCATTTCGGACAACACTTAACAACTAAAACT 1405 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 ACCGCCCGGCTAGGCTTCCGGTTCACTCTCACCCCTTCTCTCCCGCACACGCTCTACTAC 1465 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 ------------------------------------------------------------ consensus_8962#3 ------------------------------------------------------------ consensus_8962#2 ------------------------------------------------------------ consensus_8962#0 ATTAGTATCCAGTTTTGGGTACGCTGCACCGGAACCAAACATAACAGCTCTCGTGCGCGT 1525 consensus_8962#5 ------------------------------------------------------------ consensus_8962#4 ------------------------------------------------------------ consensus_8962#6 ------------------------------------------------------------ consensus_8962#1 -------------------- consensus_8962#3 -------------------- consensus_8962#2 -------------------- consensus_8962#0 GTACTCATTCAACCACGGTT 1545 consensus_8962#5 -------------------- consensus_8962#4 -------------------- consensus_8962#6 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||