These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8967#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1357 fasta sequence [ACCCACGCGTCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCCACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGTCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATTATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA-TCCAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGGACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGTACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGGTGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCGGCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTCCCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGACCGAACAGTCGAGTGGA] [+] EMBL BM612911 [ACCCACGCGTCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCCACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGTCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATTATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGACCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA TCCAGGAGGAACCACACTTTTCCGAATTCAGCTAC ] [+] EMBL CNS08TSO [ CGGTACCCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACCGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGACATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCA CCTGCTGAGTGGGCTGCTGGTGAAAAAAAAAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGACATCATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGAGGCGCATCACGCCCCCGTTCAAGCCGCA GTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA TCCAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATAT ] [-] EMBL CNS08WOH [ CCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGA TCCAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGGACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGTACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGGTGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCGGCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTCCCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGAC ] [-] EMBL CNS08FA3 [ GGAAAAGCGCTACTTCGATCGGGAGTTCACCGGCGAGAGCGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATTTTAGGAGGAACCACACTTTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGGACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGTACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGGTGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCGGCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTCCCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGACCGAACAGTCGAGTGGA] [-] EMBL CNS0906E [ AGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGAAGGTTACGAGCTAAAATTTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTTACAATC ] [-] EMBL CNS08TSP [ CAGCAGCAGCAGCAAGGGGTCAGCGTAACGTTCGTAAAAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGATTACTACGCGTATTCCAATAGCCCG ] consensusID : consensus_8967#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1009 fasta sequence [TGTGTGTGTGTTTTTTTTTAATTAAATTTATCTATTACTTAGGGATTACTGTAACGCTATTGTGGCCTTCGCTTAGAAGTAATAGTAGTAGTAGTAGTAGTAGTAGTAGTATTTTTTTCGTTTTCTCATTTGCGCTAACTTTTAGTAATCCTTTTCCCGTTGTCCTTAATGCGCGGGAGGGAAAGGAATATTTGTTTCGCTGATCTTCTAGATGTTTGTAAAGCCTCTCCCCCCTTCTTAAAAAAAACAAACATTATTTCGGAAGCCAGTTTTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTATCGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGCTCGTGCTTTACTCGATCTCGATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCGTGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCCTCTTCCGCCAAGAGCACACAGCATTTGCGCGCCAATTTCTACATGCCTATATGCTGCCTATAGGCCAGGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTATTAACTTCATGCTATCACAGCCCGTTGCTTTCTAATCTTGCGTCATTGAGCGCGCACGTTGCGTCACTTGCTGCGCGCGCACCAGCTTATCGTCTATAAAAGCAGCTTCTATATTAACATGCTTCTCTCCCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAGCGTGTTTTCTTCTCACGGCAGCAGCACTACTTGGGAGCTGTGTCCTTTAATAATAATACCTCCGCGCTTGTACACCACACATCACACCGGTACAAGGTTTACTACGGTGGTCACGGATAAACATGGGGGAAACAAAACAGGCGCATTTGAAAGTGATAGGAAACAAGGTTCACAATTATTTGGGGGGAGCGTTTGCGCG] [+] EMBL CNS099CW [TGTGTGTGTGTTTTTTTTTAATTAAATTTATCTATTACTTAGGGATTACTGTAACGCTATTGTGGCCTTCGCTTAGAAGTAATAGTAGTAGTAGTAGTAGTAGTAGTAGTATTTTTTTCGTTTTCTCATTTGCGCTAACTTTTAGTAATCCTTTTCCCGTTGTCCTTAATGCGCGGGAGGGAAAGGAATATTTGTTTCGCTGATCTTCTAGATGTTTGTAAAGCCTCTCCCCCCTTCTTAAAAAAAACAAACATTATTTCGGAAGCCAGTTTTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTATCGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGCTCGTGCTTTACTCGATCTCGATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCGTGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCCTCTTCCGCCAAGAGCACACAGCATTTGCGCGCCAATTTCTACATGCCTATATGCTGCCTATAGGCCAGGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTATTAACTTCATGCTATCACAGCCCGTTGCTTTCTAATCTTGCGTCATTGAGCGCGCACGTTGCGTCACTTGCTGCGCGCGCACCAGCTTATCGTCTATAAAAGCAGCTTCTATATTAACATGCTTCTCTCCCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAGCGTGTTTTCTT ] [-] EMBL CNS099CV [ TTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTATCGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGCTCGTGCTTTACTCGATCTCGATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCGTGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCCTCTTCCGCCAAGAGCACACAGCATTTGCGCGCCAATTTCTACATGCCTATATGCTGCCTATAGGCCAGGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTATTAACTTCATGCTATCACAGCCCGTTGCTTTCTAATCTTGCGTCATTGAGCGCGCACGTTGCGTCACTTG TGCGCGCGCACCAGCTTATCGTCTATAAAAGCAGCTTCTATATTAACATGCTTCTCTCTCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTAGCGTGTTTGCTTCTCACGGCAGCAGCACTACTTGGGAGCTGTGTCCTTTAATAATAATACCTCCGCGCTTGTACACCACACATCACACCGGTACAAGGTTTACTACGGTGGTCACGGATAAACATGGGGGAAACAAAACAGGCGCATTTGAAAGTGATAGGAAACAAGGTTCACAATTATTTGGGGGGAGCGTTTGCGCG] consensusID : consensus_8967#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 759 fasta sequence [AGGACAGAGGTGGCCCACACGATGGCCGAGAGTCGCGTGCTCAAGACGACCAATCATCCGTTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAGTACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCTACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTAAAAAAAATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTC] [+] EMBL CNS08FA2 [AGGACAGAGGTGGCCCACACGATGGCCGAGAGTCGCGTGCTCAAGACGACCAATCATCCGTTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAGTACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCTACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAGTTCCCGCGCAACATCAGCCCGAACGCGCGCAGCTGCTGAGCGGGCTGCTGGTGAAAAATCCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTAAAAAAAATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGATCGGGAGTTC] [+] EMBL CNS08WOG [ GAC GAGGTGG CCACACGATGGCCGAGAGTCGCGTGCTCAAGAAGACCAATCATCCGTTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAGTACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGATCGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGCATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGACGGCCACATCAAGATCGCCGACTTTGGCCTGTGCAAGGAGGACATCACGTACGGCCGGACGACGAAAACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGCCACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTGCCGTTCTAC ] consensusID : consensus_8967#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 677 fasta sequence [CCGATTATAATAGATCTCAATACAGAGAGACACAACTTTACACACACAGGCAGACAGACAGACAAACAGACCCACCTGAATATTAACTCTCTAGCAGGAGCAGGAAAGGTAGTGTGGGGTGGTGTGCTCTTGTGGAAAAGGGTTGCACTTTTAGTTGCCTTTCTTATCATGTTCAACAGAGCTCCACATCTCCCGTGTATCAGTGAACGAACGAGTGGTAACACGAAATGTTCACCTACAAACAGCTCATAGTATAATGTTCACCAGCCAACCCCAGCCAACCATCTCGTCACGAAGAATGGAAGCGATTTTGATCGTACTTGCGCGAGATTCCTTGAGCGAACGAAGAAGAAATTAACACTATTTGCGCGCTATTTTAGTGTCGTATAACACAGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCATAATTTAACCGAAGTTTGAGCACCCATTTAGAGAGGAGGATAAGTAAGTTTTGAACTTAGCTACTTTAATTCGTAAAAAACAACAAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGTATACACGCGCATGGGGGAGCGCGTTCGATTAGCACTATTACTTATTATTATTACCTTTTGCGCGACTCTACACACACA] [+] EMBL BM630354 [CCGATTATAATAGATCTCAATACAGAGAGACACAACTTTACACACACAGGCAGACAGACAGACAAACAGACCCACCTGAATATTAACTCTCTAGCAGGAGCAGGAAAGGTAGTGTGGGGTGGTGTGCTCTTGTGGAAAAGGGTTGCACTTTTAGTTGCCTTTCTTATCATGTTCAACAGAGCTCCACATCTCCCGTGTATCAGTGAACGAACGAGTGGTAACACGAAATGTTCACCTACAAACAGCTCATAGTATAATGTTCACCAGCCAACCCCAGCCAACCATCTCGTCACGAAGAATGGAAGCGATTTTGATCGTACTTGCGCGAGATTCCTTGAGCGAACGAAGAAGAAATTAACACTATTTGCGCGCTATTTTAGTGTCGTATAACACAGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCATAATTTAACCGAAGTTTGAGCACCCATTTAGAGAGGAGGATAAGTAAGTTTTGAACTTAGCTACTTTAATTCGTAAAAAACAACAAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGTATACACGCGCATGGGGGAGCGCGTTCGATTAGCACTATTACTTATTATTATTACCTTTTGCGCGACTCTACACACACA] consensusID : consensus_8967#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGTAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGACCGGGAGTTCACCGGCGAGAGTGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAAGAACCACACTTTTCCGAATTTAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAGGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGAAGGGTGAGTGTGGGACCTGGACACCAGACACTGCGCCTTCTTTGGAAACCCTGTAATTCGTAACAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGCATACACGCGTAAGGGGAACGCGCGTTCGATTAGCATTATTACTTATTA] [+] EMBL BM621161 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAATCCAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTCTTTGCCAGCATCAACTGGACGGATCTGGTGCAGTAGCGCATCACGCCCCCGTTCAAGCCGCAGGTCACGAGCGACACGGACACGCGCTACTTCGACCGGGAGTTCACCGGCGAGAGTGTGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAAGAACCACACTTTTCCGAATTTAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACCACTCGCACAACTTTCACCCGATGCAGTGAGAGCAGGCGGCCCGTGAAAGGCGCCCGGTGAGTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGAAGGGTGAGTGTGGGACCTGGACACCAGACACTGCGCCTTCTTTGGAAACCCTGTAATTCGTAACAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATCCTTTGTTCTCTTCCTGCTACTAGCATACACGCGTAAGGGGAACGCGCGTTCGATTAGCATTATTACTTATTA] consensusID : consensus_8967#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 323 fasta sequence [CAGAATCGNCACGAGGCNAAAAAGAGGCTCGCTGCTGCTTCTCGGCCAGCGTTTGCCAGCGAGAATCCTTTGTATCTCTTCCTGCTACTAGCATACACGCGCACGGGGGAGCGCGTTCGATTAGCATTATTACTTATTATTATTACCTTTGCGCGACTCTACACACACACACACACACGCGCAGCAACGCTACCGCCCCAAATAATTTGTGAACCTTGTTTACCTATCACTTTCAAATGCGCCTGTTTCTNGTTTCCCCCGTGATTNATCCGTGACCACCGTAGTGGACCTTGTACCGGTGTGGTGTGTGGTGTAACAAGCGC] [+] EMBL BX468722 [CAGAATCGNCACGAGGCNAAAAAGAGGCTCGCTGCTGCTTCTCGGCCAGCGTTTGCCAGCGAGAATCCTTTGTATCTCTTCCTGCTACTAGCATACACGCGCACGGGGGAGCGCGTTCGATTAGCATTATTACTTATTATTATTACCTTTGCGCGACTCTACACACACACACACACACGCGCAGCAACGCTACCGCCCCAAATAATTTGTGAACCTTGTTTACCTATCACTTTCAAATGCGCCTGTTTCTNGTTTCCCCCGTGATTNATCCGTGACCACCGTAGTGGACCTTGTACCGGTGTGGTGTGTGGTGTAACAAGCGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8967#0 ------------------------------------------------------------ consensus_8967#2 AGGACAGAGGTGGCCCACACGATGGCCGAGAGTCGCGTGCTCAAGACGACCAATCATCCG 60 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ------------------------------------------------------------ consensus_8967#0 ------------------------------------------------------------ consensus_8967#2 TTTTTGATATCGCTAAAGTACTCGTTCCAAACGGTCGATCGCCTGTGCTTCGTGATGCAG 120 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ------------------------------------------------------------ consensus_8967#0 ------------------------ACCCACGCGT-CCGCGAACGCATATTCCCCGAGGAT 35 consensus_8967#2 TACGTCAACGGGGGCGAGCTGTTCTTCCACCTGAGCCGCGAACGCATATTCCCCGAGGAT 180 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 -----------------------------TGTGTGTGTGTTTTTTTTTAATTAAATTTAT 31 consensus_8967#0 CGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGC 95 consensus_8967#2 CGGACGCGCTTCTACGCGGCGGAAATTATTTCAGCGCTCGGCTACCTACACTCGCACGGC 240 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ----CCGATTATAATAGATCTCAATACAGAGAGACACAACTTTACACACACAGGCAGACA 56 consensus_8967#5 ---------CAGAATCGNCACGAGGCNAAAAAGAGGCTCGCTGCTGCTTCTCGGCCAGC- 50 consensus_8967#1 CTATTACTTAGGGATTACTGTAACGCTATTGTGGCCTTCGCTTAGAAGTAATAGTAGTAG 91 consensus_8967#0 ATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGAC----GGCCACAT 151 consensus_8967#2 ATCATCTATCGGGACTTGAAGCTGGAAAACCTGCTGCTCGACAAGGAC----GGCTACAT 296 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 GACAGACAAACAGACCC---ACCTGAATATTAACTCTCTAGCAGGAGC----AGGAAAGG 109 consensus_8967#5 GTTTGCCAGCGAGAATC---CTTTGTATCT---CTTCCTGCTACTAGC----ATACACGC 100 consensus_8967#1 TAGTAGTAGTAGTAGTAGTATTTTTTTCGTTTTCTCATTTGCGCTAACTTTTAGTAATCC 151 consensus_8967#0 CAAGATCGCCGACTTTGGCCT-GTGCAAGGAGGACATCACGTACGGCCGGACGACG-AAA 209 consensus_8967#2 CAAGATCGCCGACTTTGGCCT-GTGCAAGGAGGACATCACGTACGGCCGGACGACG-AAA 354 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 TAGTGTGGGGTGGTGTGCTCTTGTGGAAAAGGGTTGC-ACTTTTAGTTGCCTTTCT-TAT 167 consensus_8967#5 --GCACGGGGGAGCGCGTTC-----GATTAGCATTATTACTTATTATTATTACCTT-TGC 152 consensus_8967#1 TTTTCCCGTTGTCCTTAATGCGCGGGAGGGAAAGGAATATTTGTTTCGCTGATCTTCTAG 211 consensus_8967#0 ACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGT 269 consensus_8967#2 ACGTTCTGCGGTACGCCCGAGTACCTGGCGCCGGAGGTGCTGGAGGACAACGATTACGGC 414 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 CATGTTCAACAGAGCTCCACATCTCCCGTGTATCAGTGAACGAACGAGTGGTAACACGAA 227 consensus_8967#5 GCGACTCTACACACACACACA-CACACGCGCAGCAACGCTACCGCCCCAAATAATTTGTG 211 consensus_8967#1 ATGTTTGTAAAGCCTCTCCCCCCTTCTTAAAAAAAACAAACATTATTTCGGAAGCCAGTT 271 consensus_8967#0 CACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTG 329 consensus_8967#2 CACGCGGTCGACTGGTGGGGCACGGGCGTCGTCATGTACGAGATGATTTGCGGCCGGCTG 474 consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ATGTTCACCTACAAACAGCTCATAGTATAATGTTCACCAGCCAACCCCAGCCAACCATCT 287 consensus_8967#5 AACCTTGTTTACCTATCACTTTCAAATGCGCCTGTTTCTNGTTTCCCCCGTGATTNATC- 270 consensus_8967#1 TTATATGTTTTTTTCCTCTCCCTCGCAGTCAGTAGTAGTAATATTAGTAGTAGTATTTAT 331 consensus_8967#0 CCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAG 389 consensus_8967#2 CCGTTCTACAACCGCGACCACGACATCCTGTTCACGCTGATCCTGATGGAGGAGGTGAAG 534 consensus_8967#4 ---------------------------CCGCCCACGCGTCCGCCCACGCGTCCG------ 27 consensus_8967#3 CGTCACGAAGAATGGAA--GCGATTTTG-ATCGTACTTGCGCGAGATTCCTTGAG----- 339 consensus_8967#5 ---CGTGACCACCGTAG--TGGACCTTGTACCGGTGTGGTGTGTGGTGTAACAAG----- 320 consensus_8967#1 CGCTAGGACATTCGCGCTTTCTATATTGACCTCGTGC---TCGTGCTTTACTCGATCTCG 388 consensus_8967#0 TTCCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAAT 449 consensus_8967#2 TTCCCGCGCAACATCAGCCCGAACGCGCGCAGC-TGCTGAGCGGGCTGCTGGTGAAAAAT 593 consensus_8967#4 --CCCGCGCAACATCAGCCCGAACGCGCGCAGCCTGCTGAGCGGGCTGCTGGTGAAAAAT 85 consensus_8967#3 ----CGAACGAAGAAGAAATTAACACTATTTGCGCGCTATTTTAGTGTCGTATAACACAG 395 consensus_8967#5 ----CGC----------------------------------------------------- 323 consensus_8967#1 ATTTCAATGGGGAAGGAATCCCTCTCTCTCTCTCTACCGTGCAATGACCTCTTCTAACCG 448 * consensus_8967#0 CCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATTATGGCCCACCCGTTC 509 consensus_8967#2 CCGAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTC 653 consensus_8967#4 CCAAAGCAGCGGCTCGGGGGCGGCCCGGACGATGCGAAGGAAATCATGGCCCACCCGTTC 145 consensus_8967#3 AGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGCATAATTTAACCGAAG 455 consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 TGTTAGCGAAGAGAGTTGGTGCAAGGGTGCGTATTTCATAGCATCCTTGCGTATATATCC 508 consensus_8967#0 TTTGCCAGCATCAACTGGACGGA-TCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCC 568 consensus_8967#2 TTTGCCAGCATCAACTAAAAAAAATCTGGTGCAGAAGCGCATCACGCCCCCGTTCAAGCC 713 consensus_8967#4 TTTGCCAGCATCAACTGGACGGA-TCTGGTGCAGTAGCGCATCACGCCCCCGTTCAAGCC 204 consensus_8967#3 TTTGAGCACCCATTTAGAGAGGAGGATAAGTAAGTTTTGAACTTAGCTACTTTAATTCGT 515 consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 TCTTCCGCCAAGAGCACACAGCATTTGCGCGCCA-ATTTCTACATGCCTATATGCTGCCT 567 consensus_8967#0 GCAGGTCACGAGCGACACGGACACGC-GCTACTTCGATCGGGAGTTCACCGGCGAGAGCG 627 consensus_8967#2 GCAGGTCACGAGCGACACGGACACGC-GCTACTTCGATCGGGAGTTC------------- 759 consensus_8967#4 GCAGGTCACGAGCGACACGGACACGC-GCTACTTCGACCGGGAGTTCACCGGCGAGAGTG 263 consensus_8967#3 AAAAAACAACAAAAAAGAGGCCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATC 575 consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ATAGGCCA-GGTCCATACACGTACACACACACACACACACACATTTTCTAACCACTATTA 626 consensus_8967#0 TGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAGGAACCACACT 687 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 TGGAGCTGACACCGTCCGACTCGAACGGGCCGCTCGGTGCGATCCAGGAAGAACCACACT 323 consensus_8967#3 CTTTGTTCTCTTCCTGCTACTAGTATACACGCGCATGGGGGAGCGCGTTCGATTAGCACT 635 consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 TTAACTTCATGCTATCACAGCCCGTTG--CTTTCTAATCTTGCGTCATTGAGCGCGCACG 684 consensus_8967#0 TTTCCGAATTCAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACC 747 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 TTTCCGAATTTAGCTACCAGGATATGGCTTCCACCATGAACACGCCCAGCTACATGAACC 383 consensus_8967#3 ATTACTTATTATTATTACCTTTTGCGCGACTCTACACACACA------------------ 677 consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 TTGCGTCACTTGCTGCGCGCGCACCAGCTT--ATCGTCTATAAAAGCAGCTTCTATATTA 742 consensus_8967#0 ACTCGCACAACTTTCACCCGATGCAGTGAGAGCAAGCGGCCCGTGAAAGGCGCCCGGTGA 807 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 ACTCGCACAACTTTCACCCGATGCAGTGAGAGCAGGCGGCCCGTGAAAGGCGCCCGGTGA 443 consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ACATGCTTCTCTCCCCCCCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 802 consensus_8967#0 GTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGGGGATGGGTGAGTGTGGGGTACCTGG 867 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 GTTCGGGCGCACAGTAGCGCGAAACAATGGTGGGG--AAGGGTGAGTGTGGG--ACCTGG 499 consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 CTTTTTA-GCGTGTTTTCTTCTCACGGCAGCAGCA--CTACTTGGGAGCTGTGTCCTTTA 859 consensus_8967#0 ACACCAGACACGGAAACTGCTCCTCCGTTGGAGAACCCCGCTCTCCCCTCCCCTCTCTGT 927 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 ACACCAGACAC------TGCGCCTTCTTTGGA-AACCCTGTAATTCGTAACAAAAAGAGG 552 consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ATAATAA----------TACCTCCGCGCTTGTACACCACACATCACACCGGTACAAGGTT 909 consensus_8967#0 ACACAATGGGTTATGGTGAAAATACCCGGCCAAAACGCCCGCGTCGTGGATATATTCCGG 987 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 CCTCGCTGCTGCTTCTCGCCAGCGTTTGCCAGCGAGAATC----CTTTGTTCTCTTCCTG 608 consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 TACTACGGTGGTCACGGATAAACATGGGGGAAACAAAACAGGCGCATTTGAAAGTGATAG 969 consensus_8967#0 TGTGCCGGGTTCAATCGCTGGAATCGCACGGGGCCGTGAGGAAATGATGCAGAACGCGCG 1047 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 CTACTAGCATACACGCGTAAGGGGAACGCGCGTTCGATTAGCATTATTACTTATTA---- 664 consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 GAAACAAGGTTCACAATTATTTGGGGGGAGCGTTTGCGCG-------------------- 1009 consensus_8967#0 GCGAGGATAAAAGGGGAAGAGAAAAAGCATGAAGAAGGCAAATCGTGAATAGAGTGAAGA 1107 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ------------------------------------------------------------ consensus_8967#0 AGGTAACGAGCAAAAATCTTTTTCGTTTGAATAGCAGCAGCAGCAGCAGCAAGGGGTCAG 1167 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ------------------------------------------------------------ consensus_8967#0 CGTAACGTTCGTAACAATCCGCCAGCAAAAGCATACGGAACCAAGCCTGTTTATGTTCGA 1227 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ------------------------------------------------------------ consensus_8967#0 TTACTACGCGTATTCCAATAGCCCGGAGGTGTGAATTTTCTGTATGTGTGTGTGTGTGTC 1287 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ------------------------------------------------------------ consensus_8967#0 CCGTCTGCCCTATTCCTGTCGGTGCCGCTTGAACCGCACCACCAACGGTCGGACCGAACA 1347 consensus_8967#2 ------------------------------------------------------------ consensus_8967#4 ------------------------------------------------------------ consensus_8967#3 ------------------------------------------------------------ consensus_8967#5 ------------------------------------------------------------ consensus_8967#1 ------------------------------------------------------------ consensus_8967#0 GTCGAGTGGA 1357 consensus_8967#2 ---------- consensus_8967#4 ---------- consensus_8967#3 ---------- consensus_8967#5 ---------- consensus_8967#1 ---------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||