cluster # 8971

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8971 cluster # 8971 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8971#0 length = 1389 sequences # 11

consensus_8971#1 length = 772 sequences # 1
consensus_8971#2 length = 736 sequences # 1

consensusID : consensus_8971#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1389
fasta sequence

                              [CCGCCCACGCGTCCG-AACAAAACTACAGAGAACACAAGGTTTAGCATCTGGAATAGGAATTACAATCATTCAATGAAAATCAGATGACAAATTTTAGTTTTTACAACCTCGTTTTATTGTTGTGTCTGTCATTTGTAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAATCGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCACCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTT-GGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGTTAATAATCT-TCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAACAATTGAAGGCTGAATGGGAAAAAAATGACAACTACTGTGCGCTCATCAGCAAAAAACTGAA-TTTTGATGTTCTTTTAGATCTAATAGATGCAGCCATATTTGATTTTCTAATACAAAATGGTGATAGACATCATTACGAAACGCGCGAAAATCGGGTTTTATTGCTGGACAATGGAAAAGGGTTTGGTAATCCATTTGTTGATCATATAGATATACTTGCACCTTTATATCAATGTTGTTATATCCGACGCACAACTTGGGAGAGGTTACTAATATTTTCTGGAGGAGCACTAAGTGAAACTTTGGAAGAATTAAACAAGCTGGACAGTTTATATCCTCTCCTAAACAAAAACCACTATGTTGCTATTGAAAGACGACTTCTTTATATTTACAGCACGGTTGAGTTATGTAGAGAAAAGTTTGGCA]

[+] EMBL BM633145             [CCGCCCACGCGTCCG AACAAAACTACAGAGAACACAAGGTTTAGCATCTGGAATAGGAATTACAATCATTCAATGAAAATCAGATGACAAATTTTAGTTTTTACAACCTCGTTTTATTGTTGTGTCTGTCATTTGTAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAATCGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCACCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTTGGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM600995             [            CCGAAACAAAACTACAGAGAACACAAGGTTTAGC  CTGGAATAGGAATTACAATCATTCAATGAAAATCAGATGACAAATTTTAGTTTTTACAACCTCGTTTTATTGTTGTGTCTGTCATTTGTAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAATCGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCACCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTCAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS090SO             [                                 CACAAGGTTTAGCATCTGGAATAGGAATTACAATCATTCAATGAAAATCAGATGACAAATTTTAGTTTTTACAACCTCGTTTTATTGTTGTGTCTGTCATTTGTAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAATCGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCACCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTTTTTTTGGAGCTTACCAACTCGCAATTAGTACTTTTAAAGCCAAGTA GGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGTTAATAATCT TCAGTGCGTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08QTS             [                                            GCATCTGGAATAGGAATTACAATCATTCAATGAAAATCAGATGACAAATTTTAGTTTTTACAACCTCGTTTTATTGTTGTGTCTGTCATTTGTAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAATCGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCACCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM598134             [                                                                                              TTAGGTTTTACAACCTCGTTTTATTGCTGTGTCTGTCGTTTGGAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAATCGGCTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGGAGGTCACCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGGACACCAGGCAATCGTCGTTGAATCGAAGATATTGAAATCAATTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAGAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGAGGCCAAATGCAAATATAGTTGTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM602104             [                                                                                                                                                                        ccgGATCTACAATCGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCACCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTT GGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGGTAATAATCT TCAGTGCGTGTATGGTGTCTGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09M9C             [                                                                                                                                                                                                                                                                                                                                                                  AAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGA GAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTT GGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGTTAATAATCT TCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAACAATTGAAGGCTGAATGGGAAAAAAATGACAACTACTGTGCGCTCATCAGCAAAAAACTGAA TTTTGATGTTCTTTTAGATCTAATAGATGCAGCCATATTTGATTTTCTAATACAAAATGGTGATAGACATCATTACGAAACGCGCGAAAATCGGGTTTTATTGCTGGACAATGGAAAAGGGTTTGGTAATCCATTTGTTGATCATATAGATATACTTGCACCTTTATATCAATGTTGTTATATCCGACGCACAACTTGGGAGAGGTTACTAATATTTTCTGGAGGAGCACTAA                                                                                                                                    ]
[+] EMBL BX622439             [                                                                                                                                                                                                                                                                                                                                                                                                        TTTTCCTAAAACATGTAATTCGAGCAGCGTATGAAAGATCGCAAACTCGTGGCCAAATGCAAATGTAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCCATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTT GGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGTAGCTGGACGCCGAATTTCTTTGCGCGATAGTATTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGTTAATAATCT TCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAGCAATTGAAGGCTGAATGGGAAAAAAATGACAACTACTGTGCGCTCATCAGCAAAAAACTGAATTTTTGATGGTCTTNTAGATCTAATAGATGCAGCC                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS09M9D             [                                                                                                                                                                                                                                                                                                                                                                                                                                CAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTT GGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGTTAATAATCT TCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAACAATTGAAGGCTGAATGGGAAAAAAATGACAACTACTGTGCGCTCATCAGCAAAAAACTGAA TTTTGATGTTCTTTTAGATCTAATAGATGCAGCCATATTTGATTTTCTAATACAAAATGGTGATAGACATCATTACGAAACGCGCGAAAATCGGGTTTTATTGCTGGACAATGGAAAAGGGTTTGGTAATCCATTTGTTGATCATATAGATATACTTGCACCTTTATATCAATGTTGTTATATCCGACGCACAACTTGGGAGAGGTTACTAATATTTTCTGGAGGAGCACTAAGTGAAACTTTGGAAGAATTAAACAAGCTGGACAGTTTAT                                                                                             ]
[-] EMBL CNS090SP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTT GGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGCCAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGTTAATAATCT TCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCAAAAAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAACAATTGAAGGCTGAATGGGAAAAAAATGACAACTACTGTGCGCTCATCAGCAAAAAACTGAA TTTTGATGTTCTTTTAGATCTAATAGATGCAGCCATATTTGATTTTCTAATACAAAATGGTGATAGACATCATTACGAAACGCGCGAAAATCGGGTTTTATTGCTGGACAATGGAAAAGGGTTTGGTAATCCATTTGTTGATCATATAGATATACTTGCACCTTTATATCAATGTTGTTATATCCGACGCACAACTTGGGAGAGGTTACTAATATTTTCTGGAGGAGCACTAAGTGAAACTTTGGAAGAATTAAACAAGCTGGACAGTTTATATCCTCTCCTAAACAAAAACCACTATGTTGCTATTGAAAGACGACTTCTTTATATTTACAGCACGGTTGAGTTATGTAGAGAAAAGTTTGGCA]
[-] EMBL CNS08QTT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGCTGCAACAAACAATGCCAGTGGTTAATAATCTCTCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAACAATTGAAGGCTGAATGGG AAAAAATGACAACTACTGTGCGCTCATCAGCAAAAAACTGAA TTTTGATGTTCTTTTAGATCTAATAGATGCAGCCATATTTGATTTTCTAATACAAAATGGTGATAGACATCATTACGAAACGCGCGAAAATCGGGTTTTATTGCTGGACAATGGAAAAGGGTTTGGTAATCCATTTGTTGATCATATAGATATACTTGCACCTTTATATCAATGTTGTTATATCCGACGCACAACTTGGGAGAGGTTACTAATATTTTCTGGAGGAGCACTAAGTGAAACTTTGGAAGAATTAAACAAGCTGGACAGTTTATATCCTCTCCTAAACAAAAACCACTATGTTGCTATTGAAAGACGACTTCTTTATATTTACAGCACGGTTGAGTTATGTAGAGAA          ]




>consensus_8971#0
CCGCCCACGCGTCCGAACAAAACTACAGAGAACACAAGGTTTAGCATCTGGAATAGGAAT
TACAATCATTCAATGAAAATCAGATGACAAATTTTAGTTTTTACAACCTCGTTTTATTGT
TGTGTCTGTCATTTGTAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAAT
CGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCA
CCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGG
CAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACA
TCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCG
TATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAAC
TAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTC
GAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTA
AGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACA
GACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACAC
CGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATGCCGAGC
TGCAACAAACAATGCCAGTGGTTAATAATCTTCAGTGCGTGTATGGTGTTTGTCATTTTT
GTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTC
TATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAG
AACAATTGAAGGCTGAATGGGAAAAAAATGACAACTACTGTGCGCTCATCAGCAAAAAAC
TGAATTTTGATGTTCTTTTAGATCTAATAGATGCAGCCATATTTGATTTTCTAATACAAA
ATGGTGATAGACATCATTACGAAACGCGCGAAAATCGGGTTTTATTGCTGGACAATGGAA
AAGGGTTTGGTAATCCATTTGTTGATCATATAGATATACTTGCACCTTTATATCAATGTT
GTTATATCCGACGCACAACTTGGGAGAGGTTACTAATATTTTCTGGAGGAGCACTAAGTG
AAACTTTGGAAGAATTAAACAAGCTGGACAGTTTATATCCTCTCCTAAACAAAAACCACT
ATGTTGCTATTGAAAGACGACTTCTTTATATTTACAGCACGGTTGAGTTATGTAGAGAAA
AGTTTGGCA

consensusID : consensus_8971#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 772
fasta sequence

                              [AGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATTCCGAGCTGCAACAAACAATGCCAGGTATAATATGAATATTTATATACGTAATGCTTTATCATTTAAATGTTCTTATCTTTCATGTTTCTTCAAGTGGTTAATAATCTTCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAANGAGCTGNTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCA]

[+] EMBL BX628039             [AGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATTCCGAGCTGCAACAAACAATGCCAGGTATAATATGAATATTTATATACGTAATGCTTTATCATTTAAATGTTCTTATCTTTCATGTTTCTTCAAGTGGTTAATAATCTTCAGTGCGTGTATGGTGTTTGTCATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAANGAGCTGNTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCA]




>consensus_8971#1
AGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGGCAAT
CGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACATCGC
CATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCGTATG
GAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAACTAAT
CGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTCGAAG
AGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCC
AAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACA
TAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGAT
AGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTAAATATGCAGATTCCGAGCTGCA
ACAAACAATGCCAGGTATAATATGAATATTTATATACGTAATGCTTTATCATTTAAATGT
TCTTATCTTTCATGTTTCTTCAAGTGGTTAATAATCTTCAGTGCGTGTATGGTGTTTGTC
ATTTTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAANGAG
CTGNTCTATTCACCATTCCGGGGAAAATTATCAAGTATAGATCCCCGTGGCA

consensusID : consensus_8971#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 736
fasta sequence

                              [GGCAGAATCGCGCACGAGNGAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATGTAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCCATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGTAGCTGGACGCCGAATTTCTTTGCGCGATAGTATTAGAATATGCAGATGCCGAGCTGCAACAAACGAATGCCAGTGGTTAAGTAATCTTCAGTGCGTGTATGGTGTTTGTCATTTGTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAANATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAGCAATTGAAGGCTGAATGGGGANAAANAAATGAGCAAGCCTACTGTGCGCTCATTCAGGCAAAAGACTGGAAGTTTTNTCGAATGGTTCCTTCTAAGGATCTTGAGTAGATGCAGGGCAGTATNCTGNCANTNTGCTGAATACCGACA]

[+] EMBL BX468000             [GGCAGAATCGCGCACGAGNGAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACTCGTGGCCAAATGCAAATGTAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCCATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGTAGCTGGACGCCGAATTTCTTTGCGCGATAGTATTAGAATATGCAGATGCCGAGCTGCAACAAACGAATGCCAGTGGTTAAGTAATCTTCAGTGCGTGTATGGTGTTTGTCATTTGTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCGGGGAAANATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAGCAATTGAAGGCTGAATGGGGANAAANAAATGAGCAAGCCTACTGTGCGCTCATTCAGGCAAAAGACTGGAAGTTTTNTCGAATGGTTCCTTCTAAGGATCTTGAGTAGATGCAGGGCAGTATNCTGNCANTNTGCTGAATACCGACA]




>consensus_8971#2
GGCAGAATCGCGCACGAGNGAAAACATATAATTCGAGCAGCGTATGGAAGATCGCAAACT
CGTGGCCAAATGCAAATGTAGTTTTCCCATCCACGGATAAACTAATCGGAGCAGTTATAA
ATGCATTGACGACGGATTCTATCCATAGCATGAAAAATTCTCGAAGAGGAACGCAATTAA
AGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTAAGCCAAGTTGGTATTCGC
GTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACAGACATAACTCGGAAATAG
TTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACACCGATAGTAGCTGGACGCC
GAATTTCTTTGCGCGATAGTATTAGAATATGCAGATGCCGAGCTGCAACAAACGAATGCC
AGTGGTTAAGTAATCTTCAGTGCGTGTATGGTGTTTGTCATTTGTTGTAAAAGCGATGAA
ATTGTATGTGATGATCAGCAAAATGGAACGCTTGAAGGAGCTGTTCTATTCACCATTCCG
GGGAAANATTATCAAGTATAGATCCCCGTGGCAGCGCACGTACAAAGAGCAATTGAAGGC
TGAATGGGGANAAANAAATGAGCAAGCCTACTGTGCGCTCATTCAGGCAAAAGACTGGAA
GTTTTNTCGAATGGTTCCTTCTAAGGATCTTGAGTAGATGCAGGGCAGTATNCTGNCANT
NTGCTGAATACCGACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8971#0      CCGCCCACGCGTCCGAACAAAACTACAGAGAACACAAGGTTTAGCATCTGGAATAGGAAT 60
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      TACAATCATTCAATGAAAATCAGATGACAAATTTTAGTTTTTACAACCTCGTTTTATTGT 120
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      TGTGTCTGTCATTTGTAATCTATTATAGTCTCAATATATATTTGTTCAATGATCTACAAT 180
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      CGACTGTTTCAAAAAGTGATTTCAGTTTGGCAGAACATCATGCATTATCGAAGCAGGTCA 240
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      CCAAAGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGG 300
consensus_8971#1      ----AGGAAACTCTTTTTCCAAGAATACGACTTCAAACAGTCTCCTTTCAGTACACAAGG 56
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      CAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACA 360
consensus_8971#1      CAATCGTCGTTAAATCGAAGATATTGAAATCAGTTTTCCGGAACAAAAATCCCAAGTACA 116
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      TCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCG 420
consensus_8971#1      TCGCCATCAAACAGAAGCTACTTAGTTGTTTTTTTCCTAAAACATATAATTCGAGCAGCG 176
consensus_8971#2      ------------------GGCAGAATCGCGCACGAGNGAAAACATATAATTCGAGCAGCG 42
                                          *  * * *          **********************

consensus_8971#0      TATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAAC 480
consensus_8971#1      TATGGAAGATCGCAAACTCGTGGCCAAATGCAAATATAGTTTTCCCATCCACGGATAAAC 236
consensus_8971#2      TATGGAAGATCGCAAACTCGTGGCCAAATGCAAATGTAGTTTTCCCATCCACGGATAAAC 102
                      *********************************** ************************

consensus_8971#0      TAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTC 540
consensus_8971#1      TAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCTATAGCATGAAAAATTCTC 296
consensus_8971#2      TAATCGGAGCAGTTATAAATGCATTGACGACGGATTCTATCCATAGCATGAAAAATTCTC 162
                      ***************************************** ******************

consensus_8971#0      GAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTA 600
consensus_8971#1      GAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTA 356
consensus_8971#2      GAAGAGGAACGCAATTAAAGCTGGTATTGGAGCTTACCAACTCGCAATTAGTACTTTTTA 222
                      ************************************************************

consensus_8971#0      AGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACA 660
consensus_8971#1      AGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACA 416
consensus_8971#2      AGCCAAGTTGGTATTCGCGTGACGAAATTATGAATGGCTCTGTATACTCAGGAAAAGACA 282
                      ************************************************************

consensus_8971#0      GACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACAC 720
consensus_8971#1      GACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACAC 476
consensus_8971#2      GACATAACTCGGAAATAGTTAGCTTTCATCTTGCAGCCATTCTTAATCTTCGATACACAC 342
                      ************************************************************

consensus_8971#0      CGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTA-AATATGCAGATGCCGAG 779
consensus_8971#1      CGATAGCAGCTGGACGCCGAATTTCTTTGCGCGATAGTCTTA-AATATGCAGATTCCGAG 535
consensus_8971#2      CGATAGTAGCTGGACGCCGAATTTCTTTGCGCGATAGTATTAGAATATGCAGATGCCGAG 402
                      ****** ******************************* *** *********** *****

consensus_8971#0      CTGCAACAAAC-AATGCCAG---------------------------------------- 798
consensus_8971#1      CTGCAACAAAC-AATGCCAGGTATAATATGAATATTTATATACGTAATGCTTTATCATTT 594
consensus_8971#2      CTGCAACAAACGAATGCCAG---------------------------------------- 422
                      *********** ********                                        

consensus_8971#0      ------------------------------TGGTTAA-TAATCTTCAGTGCGTGTATGGT 827
consensus_8971#1      AAATGTTCTTATCTTTCATGTTTCTTCAAGTGGTTAA-TAATCTTCAGTGCGTGTATGGT 653
consensus_8971#2      ------------------------------TGGTTAAGTAATCTTCAGTGCGTGTATGGT 452
                                                    ******* **********************

consensus_8971#0      GTTTGTCATTT-TTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCT 886
consensus_8971#1      GTTTGTCATTT-TTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCT 712
consensus_8971#2      GTTTGTCATTTGTTGTAAAAGCGATGAAATTGTATGTGATGATCAGCAAAATGGAACGCT 512
                      *********** ************************************************

consensus_8971#0      TGAAGGAGCTGTTCTATTCACCATTCCGGGGAAAA-TTATCAAGTATAGATCCCCGTGGC 945
consensus_8971#1      TGAANGAGCTGNTCTATTCACCATTCCGGGGAAAA-TTATCAAGTATAGATCCCCGTGGC 771
consensus_8971#2      TGAAGGAGCTGTTCTATTCACCATTCCGGGGAAANATTATCAAGTATAGATCCCCGTGGC 572
                      **** ****** **********************  ************************

consensus_8971#0      AGCGCACGTACAAAGAACAATTGAAGGCTGAATGGGAAAAAAATGACAACTACTGTGCGC 1005
consensus_8971#1      A----------------------------------------------------------- 772
consensus_8971#2      AGCGCACGTACAAAGAGCAATTGAAGGCTGAATGGGGANAAANAAATGAGCAAGCCTACT 632
                      *                                                           

consensus_8971#0      TCATCAGCAAAAAACTGAATTTTGATGTTCTTTTAGATCTAATAGATGCAGCCATATTTG 1065
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      GTGCGCTCATTCAGGCAAAAGACTGGAAGTTTTNTCGAATGGTTCCTTCTAAGGATCTTG 692
                                                                                  

consensus_8971#0      ATTTTCTAATACAAAATGGTGATAGACATCATTACGAAACGCGCGAAAATCGGGTTTTAT 1125
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      AGTAGATGCAGGGCAGTATNCTGNCANTNTGCTGAATACCGACA---------------- 736
                                                                                  

consensus_8971#0      TGCTGGACAATGGAAAAGGGTTTGGTAATCCATTTGTTGATCATATAGATATACTTGCAC 1185
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      CTTTATATCAATGTTGTTATATCCGACGCACAACTTGGGAGAGGTTACTAATATTTTCTG 1245
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      GAGGAGCACTAAGTGAAACTTTGGAAGAATTAAACAAGCTGGACAGTTTATATCCTCTCC 1305
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      TAAACAAAAACCACTATGTTGCTATTGAAAGACGACTTCTTTATATTTACAGCACGGTTG 1365
consensus_8971#1      ------------------------------------------------------------
consensus_8971#2      ------------------------------------------------------------
                                                                                  

consensus_8971#0      AGTTATGTAGAGAAAAGTTTGGCA 1389
consensus_8971#1      ------------------------
consensus_8971#2      ------------------------