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Anopheles gambiae
cluster # 8972 cluster # 8972       Sequences # 13       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8972#0 length = 1301 sequences # 3  
consensus_8972#1 length = 1289 sequences # 5  
consensus_8972#2 length = 943 sequences # 1  
consensus_8972#3 length = 822 sequences # 1  
consensus_8972#4 length = 787 sequences # 1  
consensus_8972#5 length = 761 sequences # 1  
consensus_8972#6 length = 310 sequences # 1  

consensusID : consensus_8972#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1301
fasta sequence
                              [GAAGTATTGTGTGCGTGTGTGTGTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACGGGTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTGNGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTAACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAATACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAGTTATGTTGTATAACATTAGATGTAGAAAAGAAGAACNAATAATAGTTAGTGGTGTATTGCACGGGGCTGCGCTGCAGCATACNGCACGTTCGGAGGATGTTCACTGCAAAGGCCGGAGATCGGGCCTGCCGGTTGCTAGGGAGATGCTATGCGGATGTACTCCAGGTGTGTAGTAACGTGCGCGGCAGCGTGATAAGTGTTAGGAAGATCTTCTCGTAATACATACAGAATCATCATCTTCCCGTGTGAAACATTACATGTGTGCACATGTCCAGGAANGAGCCAGTCGTGCGGTGTGTGGAAGCTGCAAACTGCAAAGCAAGAGCAACAGCGAATGGTGAGAGAAAACAACAAAAAATAAGTAGACCGTGACTGTGTGGAGAGTGGGGATTGAGTTAACAATCATGGTTCGATTTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACNATGCCAGTGAAATCACACACCACTCTCATGGACAGTGAAANGGAGGATGTTTGCATGTTACTAGAAATAAGCAAGAGAAAAAAGATGCGCGGTCACGGTGATTCACACACCGAAGAAACTGTCCTTCACGTTCGGACGGCTCGGAACGTGTGACTAGGCGAGTCAACTCACCAAACACAGCAGCATTACGGGGTTTAGGGGTAAAGGCTCGACTGCTAGATTGTTGTCATCAAACGTGGTGGTGGCACAGTCAGTGCAATGGAGAGGGAAACACGAAAAGAGCATGCCTTGCCGACAGTATCGTGTTTTTTTTTGTTCGTGTCTCTTCTTCTCACAAGCAAGAAGCCGCCATGCCGGTAAAAGTAATCGATCTAAGGACTGCAAAAACACACACGGATCAGAGCTACTGTAATTAAGAGTNATATNATATATATATATATATACATACATATATACATATACTATATNNAANGCCANNGCANTTCGTNACTGTNCGTGGNANNGGANGAGCNANAGATNGAAAGANGAATGGNAGAGCAGA]

[+] EMBL BX626872             [GAAGTATTGTGTGCGTGTGTGTGTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACGGGTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTGNGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTAACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAATACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAGTTATGTTGTATAACATTAGATGTAGAAAAGAAGAACNAATAATAGTTAGTGGTGTATTGCACGGGGCTGCGCTGCAGCATACNGCACGTTCGGAGGATGTTCACTGCAAAGGCCGGAGATCGGGCCTGCCGGTTGCTAGGGAGATGCTATGCGGATGTACTCCAGGTGTGTAGTAACGTGCGCGGCAGCGTGATAAGTGTTAGGAAGATCTTCTCGTAATACATACAGAATCATCATCTTCCCGTGTGAAACATTACATGTGTGCACATGTCCAGGAANGAGCCAGTCGTGCGGTGTGTGGAAGCTGCAAACTGC AAGCAAGAGCNACAGCGAATGGTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX621477             [                                                     CGAACGGGTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTGTGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTAACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAATACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAGTTATGTTGTATAACATTAGATGTAGAAAAGAAGAACAAATAATAGTTAGTGGTGTATTGCACGGGGCTGCGCTGCAGCATACAGCACGTTCGGAGGATGTTCACTGCAAAGGCCGGAGATCGGGCCTGCCGGTTGCTAGGGAGATGCTATGCGGATGTACTCCAGGTGTGTAGTAACGTGCGCGGCAGCGTGATAAGTGTTAGGAAGATCTTCTCGTAATACATACAGAATCATCATCTTCCCGTGTGAAACATTACATGTGTGCACATGTCCAGGAAGGAGCCAGTCGTGCGGTGTGTGGAAGCTGCAAACTGCAAAGCAAGAGCAACAGCGAATGGTGAGAGAAAACAACAAAAAATAAGTAGACCGTGACTGTGTGGAGAGTGGGGATTGAGTTAACAATCATGGTTCGATTTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACNATGCCAGTGAAATCACACACCACTCTCATGGACAGTGAAANGGAGGATGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF541673             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAGTCGTGCGGGATGTGGAAGCTGCAAACTGCAAAGCAAGAGCAACAGCGAAGGGTGAGAGAAAACAACAAAAAATAAGTAGACCGTGACTGTGTCGAGAGTGGGGATTGAGTTAACAATCGTGGTTCGATTTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACAATGCCAGTGAAATCACACACCACTCTCATGGGCAGTGAAAGGGAATTTGTTTGCATGTTACTAGAAATAAGCAAGAGAAAAAAGATGCGCGGTCACGGTGATTCACACACCGAAGAAACTGTCCTTCACGTTCGGACGGCTCGGAACGTGTGACTAGGCGAGTCAACTCACCAAACACAGCAGCATTACGGGGTTTAGGGGTAAAGGCTCGACTGCTAGATTGTTGTCATCAAACGTGGTGGTGGCACAGTCAGTGCAATGGAGAGGGAAACACGAAAAGAGCATGCCTTGCCGACAGTATCGTGTTTTTTTTTGTTCGTGTCTCTTCTTCTCACAAGCAAGAAGCCGCCATGCCGGTAAAAGTAATCGATCTAAGGACTGCAAAAACACACACGGATCAGAGCTACTGTAATTAAGAGTNATATNATATATATATATATATACATACATATATACATATACTATATNNAANGCCANNGCANTTCGTNACTGTNCGTGGNANNGGANGAGCNANAGATNGAAAGANGAATGGNAGAGCAGA]


>consensus_8972#0 GAAGTATTGTGTGCGTGTGTGTGTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACGG GTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTG NGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTA ACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAA TACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAG TTATGTTGTATAACATTAGATGTAGAAAAGAAGAACNAATAATAGTTAGTGGTGTATTGC ACGGGGCTGCGCTGCAGCATACNGCACGTTCGGAGGATGTTCACTGCAAAGGCCGGAGAT CGGGCCTGCCGGTTGCTAGGGAGATGCTATGCGGATGTACTCCAGGTGTGTAGTAACGTG CGCGGCAGCGTGATAAGTGTTAGGAAGATCTTCTCGTAATACATACAGAATCATCATCTT CCCGTGTGAAACATTACATGTGTGCACATGTCCAGGAANGAGCCAGTCGTGCGGTGTGTG GAAGCTGCAAACTGCAAAGCAAGAGCAACAGCGAATGGTGAGAGAAAACAACAAAAAATA AGTAGACCGTGACTGTGTGGAGAGTGGGGATTGAGTTAACAATCATGGTTCGATTTTGGT AGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACNATGCCAGTGAAATCACACAC CACTCTCATGGACAGTGAAANGGAGGATGTTTGCATGTTACTAGAAATAAGCAAGAGAAA AAAGATGCGCGGTCACGGTGATTCACACACCGAAGAAACTGTCCTTCACGTTCGGACGGC TCGGAACGTGTGACTAGGCGAGTCAACTCACCAAACACAGCAGCATTACGGGGTTTAGGG GTAAAGGCTCGACTGCTAGATTGTTGTCATCAAACGTGGTGGTGGCACAGTCAGTGCAAT GGAGAGGGAAACACGAAAAGAGCATGCCTTGCCGACAGTATCGTGTTTTTTTTTGTTCGT GTCTCTTCTTCTCACAAGCAAGAAGCCGCCATGCCGGTAAAAGTAATCGATCTAAGGACT GCAAAAACACACACGGATCAGAGCTACTGTAATTAAGAGTNATATNATATATATATATAT ATACATACATATATACATATACTATATNNAANGCCANNGCANTTCGTNACTGTNCGTGGN ANNGGANGAGCNANAGATNGAAAGANGAATGGNAGAGCAGA



consensusID : consensus_8972#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1289
fasta sequence
                              [TCCCCGAGGTTTAGCATTCGCAAAGTAGGAACCATTANCTCCCGATGCCGATGATTCATTGAACAGGGTTCAGAGAGGATGCACAACCAACCGAACCAAGAGTGTGCGAGTGTGCGCGCGCGCGCACGTTTGTGTGTGAGTGTTGTATAGTAGTTAAGCGTAAAAAAGTATATCTAACATATATATGATGCGTTTAAGAACGCTAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGACGAATCACACCGTTTATGAACGCTCTGCTGCCCCGGACGGATCAGTGTATTTAGGTATCGTTCGTTTTCTATTCTTTATTCATTACACAACATTTCTAAGTTGTTCACAAACATGCACACCACTCGCACACAAACTTCGAACTGCACTTTTTATCCCTTCATCGCTGATTGTATCGATGTCTCTTTCCTTCCATTTAAATGCCACATGCCCTAAGATCTCTATTTTAGCAGCAAATGTTCAAGAGAGCGATACACGATGTTTGTTATGCAAAACGTAACCTATCCGTTTGTGCCATTTCTACCGTCACTGTCGCTAATAAACGAGTAGTTTCTACGTTTGAAATTGTGCACTGGTGGTTCCATTGCATCATTGCCATATGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGCTATCCTTAAACAGGAGCTTGATCCCTTTTTTCGATCCGTATCGAACACAGTTGTTGCTTCAGGCAGATTGCGCGACTGAATGTAAAATGTGCGTGTGCATGTTCAGGAGAAAATGTCGATATGTCAGGTCAGGATGAGCTATGACGCGCACCCCATGTGATGGGTTTTCCGTTGTTCCATTCTTATATTTTCCTTCTTTGTTTCATATTGCATTGGTCTAGAGAAAACTAGACCG-AACTCTCTACCTACTGTTGCATCGACAGTATCATTAACGTTCACAGACATTCGGCGTATTGGAACGTGTGTATGTGCGTTTGTGTGTAACGTTTGGGGGAGAATAGTTTTCTTCCGTTGCGTTTACACAAGCTCCACCTAAACATGGCACTACACTAAACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCCTTTCCTCCTTGTAATAGCTGTTAAACACTTTAATTTGTGGGGAAGCGGAAAAATGAAAGATTGTTAAACAAAATAAAACCAGAAAAGAAAACAGCCGAAAAAAAAAAAAAAAAAAAAAAATGGAAAGGG]

[+] EMBL AL932042             [TCCCCGAGGTTTAGCATTCGCAAAGTAGGAACCATTANCTCCCGATGCCGATGATTCATTGAACAGGGTTCAGAGAGGATGCACAACCAACCGAACCAAGAGTGTGCGAGTGTGCGCGCGCGCGCACGTTTGTGTGTGAGTGTTGTATAGTAGTTAAGCGTAAAAAAGTATATCTAACATATATATGATGCGTTTAAGAACGCTAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGACGAATCACACCGTTTATGAACGCTCTGCTGCCCCGGACGGATCAGTGTATTTAGGTATCGTTCGTTTTCTATTCTTTATTCATTACACAACATTTCTAAGTTGTTCACAAACATGCACACCACTCGCACACAAACTTCGAACTGCACTTTTTATCCCTTCATCGCTGATTGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM587645             [                                                                                                                                                                                                              ccgGCGAAACCAGTATGCATCTTCAACTAGGCGACGAATCACACCGTTTATGAACGCTCTGCTGCCCCGGACGGATCAGTGTATTTAGGTATCGTTCGTTTTCTATTCTTTATTCATTACACAACA TCCTAAGTTGCTCACAAACATGCACACCACTCGCACACAAACTTCGAACTGCACTTTTTATCCCTTCATCGCTGATTGTATCGATGTCTCTTTCCTTCCATTTAAATGCCACATGCCCTAAGATCTCTATTTTAGCAGCAAATGTTCAAGAGAGCGATACACGATGTTTGTTATGCAAAACGTAACCTATCCGTTTGTGCCATTTCTACCGTCACTGTCGCTAATAAACGAGTAGTTTCTACGTTTGAAATTGTGCACTGGTGGTTCCATTGCATCATTGCCATATGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGCTATCCTTAAACAGGAGCTTGATCCCTTTTTTCGATCCGTATCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS093ZJ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCCCTAAGATCTCTATTTTAGCAGCAAATGTTCAAGAGAGCGATACACGATGTTTGTTATGCAAAACGTAACCTATCCGTTCGTGCCATTTCTACCGTCACTGTCGCTAATAAACGAGTAGTTTCTACGTTTGAAATTGTGCACTGGAGGTTCCATTGCATCATTGCCATATGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGCTATCCTCAAACAGGGGCTTGATCCCTTTTTTCGATCCGTATCGAACACAGTTGTTGCTTCAGGCAGATTGCGCGACTGAATGTAAAATGTGCGTGTGCATGTTCAGGAGAAAATGTCGATATGTCAGGTCAGGATGAGCTATGACGCGCACCCCATGTGATGGGTTTTCCGTTGTTCCATTCTTATATTTTCCTTCTTTGTTTCATATTGCATTGGTCTAGAGAAAACTAGACCG AACTCTCTACCTACTGTTGCATCGACAGTATCATTAACGTTCACAGACATTCGGCGTATTGGAACGTGTGTATGTGCGTTTGTGTGTAACGTTTGGGGGAGAATAGTTTTCTTCCGTTGCGTTTACACAAGCTCCACCTAAACATGGCACTACACTAAACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCCTTTCCTCCTTGTAATAGCTGTTAAACACTTTAATTTGTGGGGAAGCGGAAAAATGAAAGATTGTTAAACAAAATAAAACCAGAAAAGAAAACAGCCGAAAAAAAAAAAAAAAAAAAAAAATGGAAAGGG]
[-] EMBL CNS093ZK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATACACGATGTTTGTTATGCAAAACGTAACCTATCCGTTCGTGCCATTTCTACCCTAACTGTCGCTAATAAACGAGTAGTTTCTACGTTTGAAATTGTGGACTGGAGGTTCCATTGCATCATTGCCATATGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGCTATCCTCAAAAAGGGGCTTGATCCCTTTTTTCGATCCGTATCGAACACAGTTGTTGCTTCAGGCAGATTGCGCGACTGAATGTAAAATGTGCGTGTGCATGTTCAGGAGAAAATGTCGATATGTCAGGTCAGGATGAGCTATGACGCGCCCCCCATGTGATGGGTTTTCCGTTGTTCCATTCTTATATTTTCCTTCTTTGTTTCATATTGCATTGGTCTAGAGAAAACTAGACCG AACTCTCTACCTACTGTTGCATCGACAGTATCATTAACGTTTACAAACATTCGGCGTATTGGAACGTGTGTATGTGCGTTTGTGTGTAACGTTTGGGGGAGAATAGTTTTCTTCCGTTGCGTTTACACAAGCTCCCCCTAAACATGGCACTACACTAAACAGCGATACAGTGATGCAGGGGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGA                                                                                                                                           ]
[+] EMBL BX621422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACCTATCCGTTTGTGCCATTTCTACCGTCACTGTCGCTAATAAACGAGTAGTTTCTACGTTTGAAATTGTGCACTGGTGGTTCCATTGCATCATTGCCATATGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGCTATCCTTAAACAGGAGCTTGATCCCTTTTTTCGATCCGTATCGAACACAGTTGTTGCTTCAGGCAGATTGCGCGACTGAATGT AAATGTGCGTGTGCATGTTCAGGAGAAAATGTCGATATGTCAGGTCAGGATGAGCTATGACGCGCACCCCATGTGATGGGTTTTCCGTTGTTCCATTCTTATATTTTCCTTCTTCGTTTCATATTGCATTGGTCTAGGGAAAACTAGACCGAAACTCTCTACCTACTGTTGCATCGACAGTATCATTAACGTTCACAGACATTCGGCGTATTGGAACGTGTGTATGTGCGTATGTGTGTAACGTTTGGGGGAGAATAGTTTTCTTCCATTGCGTTTACACAAGCTCCACCTAAACATGGCACTACACTACACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCCTATCCTCCTTGTAATAGCTGNTAAACACTTTAATT                                                                                              ]


>consensus_8972#1 TCCCCGAGGTTTAGCATTCGCAAAGTAGGAACCATTANCTCCCGATGCCGATGATTCATT GAACAGGGTTCAGAGAGGATGCACAACCAACCGAACCAAGAGTGTGCGAGTGTGCGCGCG CGCGCACGTTTGTGTGTGAGTGTTGTATAGTAGTTAAGCGTAAAAAAGTATATCTAACAT ATATATGATGCGTTTAAGAACGCTAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGA CGAATCACACCGTTTATGAACGCTCTGCTGCCCCGGACGGATCAGTGTATTTAGGTATCG TTCGTTTTCTATTCTTTATTCATTACACAACATTTCTAAGTTGTTCACAAACATGCACAC CACTCGCACACAAACTTCGAACTGCACTTTTTATCCCTTCATCGCTGATTGTATCGATGT CTCTTTCCTTCCATTTAAATGCCACATGCCCTAAGATCTCTATTTTAGCAGCAAATGTTC AAGAGAGCGATACACGATGTTTGTTATGCAAAACGTAACCTATCCGTTTGTGCCATTTCT ACCGTCACTGTCGCTAATAAACGAGTAGTTTCTACGTTTGAAATTGTGCACTGGTGGTTC CATTGCATCATTGCCATATGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGCT ATCCTTAAACAGGAGCTTGATCCCTTTTTTCGATCCGTATCGAACACAGTTGTTGCTTCA GGCAGATTGCGCGACTGAATGTAAAATGTGCGTGTGCATGTTCAGGAGAAAATGTCGATA TGTCAGGTCAGGATGAGCTATGACGCGCACCCCATGTGATGGGTTTTCCGTTGTTCCATT CTTATATTTTCCTTCTTTGTTTCATATTGCATTGGTCTAGAGAAAACTAGACCGAACTCT CTACCTACTGTTGCATCGACAGTATCATTAACGTTCACAGACATTCGGCGTATTGGAACG TGTGTATGTGCGTTTGTGTGTAACGTTTGGGGGAGAATAGTTTTCTTCCGTTGCGTTTAC ACAAGCTCCACCTAAACATGGCACTACACTAAACAGCGATACAGTGATGCAGGAGCAGCT TTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAA GAATAGCGGAACCTTCACCCTTTCCTCCTTGTAATAGCTGTTAAACACTTTAATTTGTGG GGAAGCGGAAAAATGAAAGATTGTTAAACAAAATAAAACCAGAAAAGAAAACAGCCGAAA AAAAAAAAAAAAAAAAAAAATGGAAAGGG



consensusID : consensus_8972#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 943
fasta sequence
                              [GCAGAATCCCGCACGAGGTTTGCATCGATTTGCCCAATCGTGCTGGTGTGCTTGTACGTGTCTGTTGTGTGTTGTGCGGTGTGAATGGGTGGTGAATTGGAGGAGCACCAGCAGCAATCGGATGCTGAGACGTCTACTGAATTTTAGCGCACTGCGTCCAGTGATAAAGCGAAACAAGCTACTATTCTACAAACAGCAATCGGTTGTTGCTTGGCAAACAAAAGTAAAACGCTAGATTTAAGAAGTATTGTGTGCGTGTGTGTGTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACGGGTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTGTGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTAACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAATACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAGGTTATGTTGTATAACATTTCNGGATGTAGACACAGAACGAACAAATAATAGTTAGTGGTGTAATTGCAACGGGGACTGGCCGCTGCAGGCATACAGCACGTTCGGAGGGATGTTCACTGCAAAAGGCCGGAAGATCGGGCCCTGGCCGGTTGCTAGGGGAGAATGCTTATGGCGGGATTGTCCTNCCCAGGGTGTGTAGTACACGTTGCAGCACCGGGAAAGACGGTNGCANTTAANGGTGGGTNCAAGGGGAANGGGAATCTTCCATCGGTTAAGTNACATACACCGGGAAAGTNCANGTCACAGTCCTTTCCCCGTGGTGCACAACANTTTTACCATGTGTTGCCANCNTTGTTCCCAGGCAAGGNGAGCCCAGTCCGTGCCCGGAGTGCGTTGTGAACG]

[+] EMBL BX467458             [GCAGAATCCCGCACGAGGTTTGCATCGATTTGCCCAATCGTGCTGGTGTGCTTGTACGTGTCTGTTGTGTGTTGTGCGGTGTGAATGGGTGGTGAATTGGAGGAGCACCAGCAGCAATCGGATGCTGAGACGTCTACTGAATTTTAGCGCACTGCGTCCAGTGATAAAGCGAAACAAGCTACTATTCTACAAACAGCAATCGGTTGTTGCTTGGCAAACAAAAGTAAAACGCTAGATTTAAGAAGTATTGTGTGCGTGTGTGTGTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACGGGTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTGTGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTAACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAATACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAGGTTATGTTGTATAACATTTCNGGATGTAGACACAGAACGAACAAATAATAGTTAGTGGTGTAATTGCAACGGGGACTGGCCGCTGCAGGCATACAGCACGTTCGGAGGGATGTTCACTGCAAAAGGCCGGAAGATCGGGCCCTGGCCGGTTGCTAGGGGAGAATGCTTATGGCGGGATTGTCCTNCCCAGGGTGTGTAGTACACGTTGCAGCACCGGGAAAGACGGTNGCANTTAANGGTGGGTNCAAGGGGAANGGGAATCTTCCATCGGTTAAGTNACATACACCGGGAAAGTNCANGTCACAGTCCTTTCCCCGTGGTGCACAACANTTTTACCATGTGTTGCCANCNTTGTTCCCAGGCAAGGNGAGCCCAGTCCGTGCCCGGAGTGCGTTGTGAACG]


>consensus_8972#2 GCAGAATCCCGCACGAGGTTTGCATCGATTTGCCCAATCGTGCTGGTGTGCTTGTACGTG TCTGTTGTGTGTTGTGCGGTGTGAATGGGTGGTGAATTGGAGGAGCACCAGCAGCAATCG GATGCTGAGACGTCTACTGAATTTTAGCGCACTGCGTCCAGTGATAAAGCGAAACAAGCT ACTATTCTACAAACAGCAATCGGTTGTTGCTTGGCAAACAAAAGTAAAACGCTAGATTTA AGAAGTATTGTGTGCGTGTGTGTGTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACG GGTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGT GTGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGT AACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAA ATACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTA GGTTATGTTGTATAACATTTCNGGATGTAGACACAGAACGAACAAATAATAGTTAGTGGT GTAATTGCAACGGGGACTGGCCGCTGCAGGCATACAGCACGTTCGGAGGGATGTTCACTG CAAAAGGCCGGAAGATCGGGCCCTGGCCGGTTGCTAGGGGAGAATGCTTATGGCGGGATT GTCCTNCCCAGGGTGTGTAGTACACGTTGCAGCACCGGGAAAGACGGTNGCANTTAANGG TGGGTNCAAGGGGAANGGGAATCTTCCATCGGTTAAGTNACATACACCGGGAAAGTNCAN GTCACAGTCCTTTCCCCGTGGTGCACAACANTTTTACCATGTGTTGCCANCNTTGTTCCC AGGCAAGGNGAGCCCAGTCCGTGCCCGGAGTGCGTTGTGAACG



consensusID : consensus_8972#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 822
fasta sequence
                              [AATNGCCCCAGGTTTCTTACTGTGAAACGTCTAGGTCAAACATATGATGAACCGAAGCCTATGGTTTACGAAATCGACAAAAACAAAACAGAAGGGAAAAAACGTAAACAGAAAATGCTTAGCATTCGCAAAAGTAGGAACCATTAGCCCCCGATGCCGATGATTCATTGAACAGGGTTCAGAGAGGATGCACAACAACCGAACCAGAGTGTGCGCGCGCGCACGTTTGTGTGTGAGTGTTGTATAGTAGTTAAGCGTAAAAAATTATATCTAACATATATATGATGCGTTTAAGAACGCTAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGACGAATCACACCGTTTATGAACGCTCTGCTGCCCCGGACGGATCAGTGTATTTAGGTATCGTTCGTTTTCTATTCTTTATTCATTACACAACATTTCTAAGTTGTTTCACAAACATGCACACCATCGCACACAAACTTCGAACTGCACTTTTTATCCCTTCATCGCTGATTGTATCGATGTCTCTTTCCTCCCATTTAAATGCCACATGCCCTAAGATCTCTATTTTAGCAGCAAATGTTCAAGAGCAGCGATACACGATGTTTGTNATGCAAAAACGTAACCTATCCGTTCGTGCCATTTCTACCGTCACTGTCGCTAATAAACGAGTAGTTTCTACGCTCCTGAACATTGTGCACTGGCANGTTCCATCTGCCTCATTGCCATATGGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGTATCCTCAAACAGGGGCTTGATCCCTTTTCGATCCGTATCGAACACAGTTGTGCTTCAG]

[+] EMBL AL693531             [AATNGCCCCAGGTTTCTTACTGTGAAACGTCTAGGTCAAACATATGATGAACCGAAGCCTATGGTTTACGAAATCGACAAAAACAAAACAGAAGGGAAAAAACGTAAACAGAAAATGCTTAGCATTCGCAAAAGTAGGAACCATTAGCCCCCGATGCCGATGATTCATTGAACAGGGTTCAGAGAGGATGCACAACAACCGAACCAGAGTGTGCGCGCGCGCACGTTTGTGTGTGAGTGTTGTATAGTAGTTAAGCGTAAAAAATTATATCTAACATATATATGATGCGTTTAAGAACGCTAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGACGAATCACACCGTTTATGAACGCTCTGCTGCCCCGGACGGATCAGTGTATTTAGGTATCGTTCGTTTTCTATTCTTTATTCATTACACAACATTTCTAAGTTGTTTCACAAACATGCACACCATCGCACACAAACTTCGAACTGCACTTTTTATCCCTTCATCGCTGATTGTATCGATGTCTCTTTCCTCCCATTTAAATGCCACATGCCCTAAGATCTCTATTTTAGCAGCAAATGTTCAAGAGCAGCGATACACGATGTTTGTNATGCAAAAACGTAACCTATCCGTTCGTGCCATTTCTACCGTCACTGTCGCTAATAAACGAGTAGTTTCTACGCTCCTGAACATTGTGCACTGGCANGTTCCATCTGCCTCATTGCCATATGGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGTATCCTCAAACAGGGGCTTGATCCCTTTTCGATCCGTATCGAACACAGTTGTGCTTCAG]


>consensus_8972#3 AATNGCCCCAGGTTTCTTACTGTGAAACGTCTAGGTCAAACATATGATGAACCGAAGCCT ATGGTTTACGAAATCGACAAAAACAAAACAGAAGGGAAAAAACGTAAACAGAAAATGCTT AGCATTCGCAAAAGTAGGAACCATTAGCCCCCGATGCCGATGATTCATTGAACAGGGTTC AGAGAGGATGCACAACAACCGAACCAGAGTGTGCGCGCGCGCACGTTTGTGTGTGAGTGT TGTATAGTAGTTAAGCGTAAAAAATTATATCTAACATATATATGATGCGTTTAAGAACGC TAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGACGAATCACACCGTTTATGAACGC TCTGCTGCCCCGGACGGATCAGTGTATTTAGGTATCGTTCGTTTTCTATTCTTTATTCAT TACACAACATTTCTAAGTTGTTTCACAAACATGCACACCATCGCACACAAACTTCGAACT GCACTTTTTATCCCTTCATCGCTGATTGTATCGATGTCTCTTTCCTCCCATTTAAATGCC ACATGCCCTAAGATCTCTATTTTAGCAGCAAATGTTCAAGAGCAGCGATACACGATGTTT GTNATGCAAAAACGTAACCTATCCGTTCGTGCCATTTCTACCGTCACTGTCGCTAATAAA CGAGTAGTTTCTACGCTCCTGAACATTGTGCACTGGCANGTTCCATCTGCCTCATTGCCA TATGGGGCAGCGCAGTAAGCAATAAACCAATAGTAAGCCGCCGTATCCTCAAACAGGGGC TTGATCCCTTTTCGATCCGTATCGAACACAGTTGTGCTTCAG



consensusID : consensus_8972#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 787
fasta sequence
                              [GATCGCAGCAGNTTTAAGTAGACGTGACTGTGTGCGAGAGTGTGGATTGATTTAACAATCATGGTTCGATTTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACAATGCCAGTGAAATCACACACCACTCTCATGGACAGTGAAAGGGAGGATGTTTGCATGTTACTAGAAATAAGAAAGAGAAAAAAGATACGCGGTCACGGTGATTCACACACCGAAGAAACTGTCCTTCACGTTCGGACGGCTCGGAACGTGTGACAAGGCGAGTCAACTCACCAAACACAGCAGCATTACGGGGTTTAGGGGTAAAGGCTCGACTGCTACATTGTTGTCATCAAACGTGGTGGTGGCACAGTCACTGCAATGGAGAGGAAAACACGAAACAGAGCATGCCTTGCCGACAGTATCGTGTACACACAATAGTCCGTGTCTCTTCTTCTCACAAGCAAAGAAGCCGCCATGCCGGTACACNCGTCAATCGAATCTTAACGNGAACTGGCACAAAACANCACACAACGGGATCACGAACGCCTAACTGGTAATTTAAAGAAGTTAATACTCCATCATACTTAATTATAATTTACACTTAGCACTTATTCTTCCCATTCATCACNTACATAGTTTTTCAACGCCACACGGGGCAAACTTCCGATTCACCTGGCCCCGCANGGGCAACGGGNGAACGACGCCCAAGCAGCACTTTGAGCAAGAAAAAATTTGGCGGACGACGCCACAACACAAAGCNNGCACAAATCTTGGCAACAATGGGTTGGNGG]

[+] EMBL AL696372             [GATCGCAGCAGNTTTAAGTAGACGTGACTGTGTGCGAGAGTGTGGATTGATTTAACAATCATGGTTCGATTTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACAATGCCAGTGAAATCACACACCACTCTCATGGACAGTGAAAGGGAGGATGTTTGCATGTTACTAGAAATAAGAAAGAGAAAAAAGATACGCGGTCACGGTGATTCACACACCGAAGAAACTGTCCTTCACGTTCGGACGGCTCGGAACGTGTGACAAGGCGAGTCAACTCACCAAACACAGCAGCATTACGGGGTTTAGGGGTAAAGGCTCGACTGCTACATTGTTGTCATCAAACGTGGTGGTGGCACAGTCACTGCAATGGAGAGGAAAACACGAAACAGAGCATGCCTTGCCGACAGTATCGTGTACACACAATAGTCCGTGTCTCTTCTTCTCACAAGCAAAGAAGCCGCCATGCCGGTACACNCGTCAATCGAATCTTAACGNGAACTGGCACAAAACANCACACAACGGGATCACGAACGCCTAACTGGTAATTTAAAGAAGTTAATACTCCATCATACTTAATTATAATTTACACTTAGCACTTATTCTTCCCATTCATCACNTACATAGTTTTTCAACGCCACACGGGGCAAACTTCCGATTCACCTGGCCCCGCANGGGCAACGGGNGAACGACGCCCAAGCAGCACTTTGAGCAAGAAAAAATTTGGCGGACGACGCCACAACACAAAGCNNGCACAAATCTTGGCAACAATGGGTTGGNGG]


>consensus_8972#4 GATCGCAGCAGNTTTAAGTAGACGTGACTGTGTGCGAGAGTGTGGATTGATTTAACAATC ATGGTTCGATTTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACAATGC CAGTGAAATCACACACCACTCTCATGGACAGTGAAAGGGAGGATGTTTGCATGTTACTAG AAATAAGAAAGAGAAAAAAGATACGCGGTCACGGTGATTCACACACCGAAGAAACTGTCC TTCACGTTCGGACGGCTCGGAACGTGTGACAAGGCGAGTCAACTCACCAAACACAGCAGC ATTACGGGGTTTAGGGGTAAAGGCTCGACTGCTACATTGTTGTCATCAAACGTGGTGGTG GCACAGTCACTGCAATGGAGAGGAAAACACGAAACAGAGCATGCCTTGCCGACAGTATCG TGTACACACAATAGTCCGTGTCTCTTCTTCTCACAAGCAAAGAAGCCGCCATGCCGGTAC ACNCGTCAATCGAATCTTAACGNGAACTGGCACAAAACANCACACAACGGGATCACGAAC GCCTAACTGGTAATTTAAAGAAGTTAATACTCCATCATACTTAATTATAATTTACACTTA GCACTTATTCTTCCCATTCATCACNTACATAGTTTTTCAACGCCACACGGGGCAAACTTC CGATTCACCTGGCCCCGCANGGGCAACGGGNGAACGACGCCCAAGCAGCACTTTGAGCAA GAAAAAATTTGGCGGACGACGCCACAACACAAAGCNNGCACAAATCTTGGCAACAATGGG TTGGNGG



consensusID : consensus_8972#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 761
fasta sequence
                              [ATCGCCACGANTGTGAGCACTACACTACACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCCTTTCCTCCTTGTAATAGCTGTTAAACACTTTAATTTGTGGGGAAGCGGAAAAATGAACAGATTGTTAAACAAAATAAAACCAGAAAAGAAAACAGCGAAAGTCACTTAGGATAGTTTAGCGTACGATTGAAAACAAGCGATAATGATGGTAGCATGTGTTAAAAACAAGTAGGCATGGTTTTGCATCGATTTGCGCAATCGTGCTGGTGTGCTTGTACGTGTCTGTGTGTGTGTGCGGTGTGAATGGGTGGTGAGTTGGAGGAGCACCAGCAGCAATCGGATGCTGAGACGTCTACTGAATTTTAGCGCACTGCGTCCAGTGATAAAGCGAAACAAGCTACTATTCTACAAACAGCAATCGACTTGTCTCGCTTGGCANACNAAAGTNAAACGCTAGATATANCGAAGTATCGTGTGCCGTGTCGCCGCGCGCCGTGTCGCGCATGANAGCACAGAGANNGAGACATAGCNAACGNGNTGACCTCTGTGCCCGCNANGTGTCGCACTCGTNNTGTGAACTGATNGCTGCCGTTGTCCTGTCGTAACNACATCAGTAGCCGTTGCCGAAATCAACATTCATTAACTCGAACACCGNAAACACACCNANNCNNNCANANANNANAAA]

[+] EMBL AL697105             [ATCGCCACGANTGTGAGCACTACACTACACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCCTTTCCTCCTTGTAATAGCTGTTAAACACTTTAATTTGTGGGGAAGCGGAAAAATGAACAGATTGTTAAACAAAATAAAACCAGAAAAGAAAACAGCGAAAGTCACTTAGGATAGTTTAGCGTACGATTGAAAACAAGCGATAATGATGGTAGCATGTGTTAAAAACAAGTAGGCATGGTTTTGCATCGATTTGCGCAATCGTGCTGGTGTGCTTGTACGTGTCTGTGTGTGTGTGCGGTGTGAATGGGTGGTGAGTTGGAGGAGCACCAGCAGCAATCGGATGCTGAGACGTCTACTGAATTTTAGCGCACTGCGTCCAGTGATAAAGCGAAACAAGCTACTATTCTACAAACAGCAATCGACTTGTCTCGCTTGGCANACNAAAGTNAAACGCTAGATATANCGAAGTATCGTGTGCCGTGTCGCCGCGCGCCGTGTCGCGCATGANAGCACAGAGANNGAGACATAGCNAACGNGNTGACCTCTGTGCCCGCNANGTGTCGCACTCGTNNTGTGAACTGATNGCTGCCGTTGTCCTGTCGTAACNACATCAGTAGCCGTTGCCGAAATCAACATTCATTAACTCGAACACCGNAAACACACCNANNCNNNCANANANNANAAA]


>consensus_8972#5 ATCGCCACGANTGTGAGCACTACACTACACAGCGATACAGTGATGCAGGAGCAGCTTTAG CAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAAT AGCGGAACCTTCACCCTTTCCTCCTTGTAATAGCTGTTAAACACTTTAATTTGTGGGGAA GCGGAAAAATGAACAGATTGTTAAACAAAATAAAACCAGAAAAGAAAACAGCGAAAGTCA CTTAGGATAGTTTAGCGTACGATTGAAAACAAGCGATAATGATGGTAGCATGTGTTAAAA ACAAGTAGGCATGGTTTTGCATCGATTTGCGCAATCGTGCTGGTGTGCTTGTACGTGTCT GTGTGTGTGTGCGGTGTGAATGGGTGGTGAGTTGGAGGAGCACCAGCAGCAATCGGATGC TGAGACGTCTACTGAATTTTAGCGCACTGCGTCCAGTGATAAAGCGAAACAAGCTACTAT TCTACAAACAGCAATCGACTTGTCTCGCTTGGCANACNAAAGTNAAACGCTAGATATANC GAAGTATCGTGTGCCGTGTCGCCGCGCGCCGTGTCGCGCATGANAGCACAGAGANNGAGA CATAGCNAACGNGNTGACCTCTGTGCCCGCNANGTGTCGCACTCGTNNTGTGAACTGATN GCTGCCGTTGTCCTGTCGTAACNACATCAGTAGCCGTTGCCGAAATCAACATTCATTAAC TCGAACACCGNAAACACACCNANNCNNNCANANANNANAAA



consensusID : consensus_8972#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence
                              [GGCAAGAATCGCCCGAGGTTAAACGTATGTATAGTGCGTNTGCGTGTACGTTTGGGGGAGAATAGTTTTCTTCCATTGCGTTTACACAAGCTCCACCTAAACATGGGACTACACTACACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCTATCCTCCTTGGTAATAGCTGTTAAACACTTTAACTTTGTGGGGAAGCGGAAAAATGAACAGATTGTTTAAACAAAATAAAACCAG]

[+] EMBL AL696782             [GGCAAGAATCGCCCGAGGTTAAACGTATGTATAGTGCGTNTGCGTGTACGTTTGGGGGAGAATAGTTTTCTTCCATTGCGTTTACACAAGCTCCACCTAAACATGGGACTACACTACACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCTATCCTCCTTGGTAATAGCTGTTAAACACTTTAACTTTGTGGGGAAGCGGAAAAATGAACAGATTGTTTAAACAAAATAAAACCAG]


>consensus_8972#6 GGCAAGAATCGCCCGAGGTTAAACGTATGTATAGTGCGTNTGCGTGTACGTTTGGGGGAG AATAGTTTTCTTCCATTGCGTTTACACAAGCTCCACCTAAACATGGGACTACACTACACA GCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATAAAGC GGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCTATCCTCCTTGGTAAT AGCTGTTAAACACTTTAACTTTGTGGGGAAGCGGAAAAATGAACAGATTGTTTAAACAAA ATAAAACCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      GAAGTATTGTGTGCGTGTGTGTGTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACGG 60
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      GTGACTTGTGCGGGAAGTGTGAATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTG 120
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      NGTGCGAATAAATTATTACTGAAACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTA 180
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ACATAACAACCAATGTGATTTTAGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAA 240
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      TACTGAAAAAACGCTATAAAAAAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAG 300
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      TTATGTTGTATAACATTAGATGTAGAAAAGAAGAACNAATAATAGTTAGTGGTGTATTGC 360
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ACGGGGCTGCGCTGCAGCATACNGCACGTTCGGAGGATGTTCACTGCAAAGGCCGGAGAT 420
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      CGGGCCTGCCGGTTGCTAGGGAGATGCTATGCGGATGTACTCCAGGTGTGTAGTAACGTG 480
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      CGCGGCAGCGTGATAAGTGTTAGGAAGATCTTCTCGTAATACATACAGAATCATCATCTT 540
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ----------------------------------GCAGAATCCCGCACGAGGTTTGCATC 26
                                                                                  

consensus_8972#1      ------------------------------------------------------------
consensus_8972#3      AATNGCCCCAGGTTTCTTACTGTGAAACGTCTAGGTCAAACATATGATGAACCGAAGCCT 60
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      CCCGTGTGAAACATTACATGTGTGCACATGTCCAGGAANGAGCCAGTCGTGCGGTGTGTG 600
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      GATTTGCCCAATCGTGCTGGTGTGCTTGTA-CGTGTCTGTTGTGTGTTGTGCGGTGTGAA 85
                                                                                  

consensus_8972#1      ------------------------------------------------TCCCCGAGGTTT 12
consensus_8972#3      ATGGTTTACGAAATCGACAAAAACAAAACAGAAGGGAAAAAACGTAAACAGAAAATGCTT 120
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ---ATCGCCACGANTGTGAGCACTACACTACACAGCGATACAGTGATGCAGGAGCAGCTT 57
consensus_8972#0      GAAGCTGCAAACTGCAAAGCAAGAGCAACAGCGAATGGTGAGAGAAAACAACAAAAAATA 660
consensus_8972#4      -------------------------------------------GATCGCAGCAGNTT-TA 16
consensus_8972#2      TGGGTGGTGAATTGGAGGAGCACCAGCAGCAATCGGATGCTGAGACGTCTACTGAATTTT 145
                                                                                  

consensus_8972#1      AGCATTC-GCAAA-GTAGGAACCATTANCTCCCGATGCCGATGATTCATTGA-ACAGGGT 69
consensus_8972#3      AGCATTC-GCAAAAGTAGGAACCATTAGCCCCCGATGCCGATGATTCATTGA-ACAGGGT 178
consensus_8972#6      -----------------------------------------------------------G 1
consensus_8972#5      TAG---C-AGAGCGTTAGAACGGAATGTGACATAAAGCGGAAGAAGGTGTGT-ACCATGT 112
consensus_8972#0      AGTAGACCGTGACTGTGTG-GAGAGTG---GGGATTG--AGTTAACAATCATGGTTCGAT 714
consensus_8972#4      AGTAGAC-GTGACTGTGTGCGAGAGTG---TGGATTG--ATTTAACAATCATGGTTCGAT 70
consensus_8972#2      AGCGCACTGCGTCCA-GTGATAAAGCGAAACAAGCTACTATTCTACAAACAGCAATCGGT 204
                                                                                  

consensus_8972#1      TCAGAGAGGATGCACAACCAACCGAACCAAGAGTGTGCGAGTGTGCGCGCGCGCGCACGT 129
consensus_8972#3      TCAGAGAGGATGCACAAC-AACCGAACCAGA-----------GTGTGCGCGCGCGCACGT 226
consensus_8972#6      GCAAGAATCGCCCGAGGTTAAACGTATGTATA----------GTGCGTNTGCGTGTACGT 51
consensus_8972#5      GTAAGAATAGCGGAACCTTCACCCTTTCCTCCTTGTAATA--GCTGTTAAACACTTTAAT 170
consensus_8972#0      TTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACNATG--CCAGTGAAA 772
consensus_8972#4      TTTGGTAGTGGAGATCAGCAGCATAAACACAATCGTAATTCATACAATG--CCAGTGAAA 128
consensus_8972#2      TGTTGCT-TGGCAAACAAAAGTAAAACGCTAGATTTAAGAAGTATTGTGTGCGTGTGTGT 263
                                                                         *        

consensus_8972#1      TTGTGTGTGAGTGTTGTATAGTAGTTAAGCGTAAA-AAAGTATATCTAACATATATATGA 188
consensus_8972#3      TTGTGTGTGAGTGTTGTATAGTAGTTAAGCGTAAA-AAATTATATCTAACATATATATGA 285
consensus_8972#6      TTGGGGGAGAATAGTTTTCTTCCATTGCGTTTACACAAGCTCCACCTAA---ACATGGGA 108
consensus_8972#5      TTGTGGGGAAGCGGAAAAATGAACAGATTGTTAAACAAAATAAAACCAG-----AAAAGA 225
consensus_8972#0      TCACACACCACTCTCATGGACAGTGAAANGGAGGATGTTTGCATGTTACTAGAAATAAGC 832
consensus_8972#4      TCACACACCACTCTCATGGACAGTGAAAGGGAGGATGTTTGCATGTTACTAGAAATAAGA 188
consensus_8972#2      GTGCGCATGAAAGAGAGAGAAAGAGACAGAGCGAACGGGTGACTTGTGCGGGAAGTGTGA 323
                               *                        *                       * 

consensus_8972#1      -TGCGTTTAAGAACGCTAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGAC----GA 243
consensus_8972#3      -TGCGTTTAAGAACGCTAAACAGCGAAACCAGTATGCATCTTCAACTAGGCGAC----GA 340
consensus_8972#6      CTACACTACACAGCGAT--ACAGTGATGCAGGA--GCAGCTTTAGCAGAGCGTT----AG 160
consensus_8972#5      AAACAGCGAAAGTCACT--TAGGATAGTTTAGCGTACGATTGAAAACAAGCGAT----AA 279
consensus_8972#0      AAGAG---AAAAAAGATGCGCGGTCACGGTGATTCACACAC-CGAAGAAACTGTCCTTCA 888
consensus_8972#4      AAGAG---AAAAAAGATACGCGGTCACGGTGATTCACACAC-CGAAGAAACTGTCCTTCA 244
consensus_8972#2      ATGTGTGTGAGTGATGTGCGTGTCTGTGTAAAATAGTGTGTGCGAATAAATTATTACTGA 383
                               *      *                                           

consensus_8972#1      --ATCACACCGTT---TATGAACG-CTCTGCT---GCCCCGGACGGATCAGTGTATTTAG 294
consensus_8972#3      --ATCACACCGTT---TATGAACG-CTCTGCT---GCCCCGGACGGATCAGTGTATTTAG 391
consensus_8972#6      --AACGGAATGTGA--CATAAAGC-GGAAGAA---GGTGTGTACCATGTGTAAGAATAGC 212
consensus_8972#5      TGATGGTAGCATGTGTTAAAAACA-AGTAGGCATGGTTTTGCATCGATTTGCGCAATCGT 338
consensus_8972#0      CGTTCGGACGGCTCGGAACGTGTG-ACTAGGCGAGTCAACTCACCAAACACAGCAGCATT 947
consensus_8972#4      CGTTCGGACGGCTCGGAACGTGTG-ACAAGGCGAGTCAACTCACCAAACACAGCAGCATT 303
consensus_8972#2      AACGAAAACGGAGGAAAAAAAACGGAAAAAGAAAGGTAACATAACAACCAATGTGATTTT 443
                             *         *                        *                 

consensus_8972#1      GTATCGTTCGTTTTCTATTCTT--TATTCATTACACAACATTTCTAAGTTGTT------C 346
consensus_8972#3      GTATCGTTCGTTTTCTATTCTT--TATTCATTACACAACATTTCTAAGTTGTTT-----C 444
consensus_8972#6      GGAACCTTCACCTATCCTCCTTGGTAATAGCTGTTAAACACTTTAACTTTGTGGGGAAGC 272
consensus_8972#5      GC-TGGTGTGCTTGTACGTGTCTGTGTGTG-TGTGCGGTGTGAATGGGTGGTGAGTT-GG 395
consensus_8972#0      ACGGGGTTTAGGGGTAAAGGCTCGACT--GCTAGATTGTTGTCATCAAACGTGGTGG-TG 1004
consensus_8972#4      ACGGGGTTTAGGGGTAAAGGCTCGACT--GCTACATTGTTGTCATCAAACGTGGTGG-TG 360
consensus_8972#2      AGTAACTAAACGAGCGGTGATGTAGAGAAGAGAGAAAATACTGAAAAAACGCTATAA-AA 502
                            *                                           *         

consensus_8972#1      ACAAACATGCACACCACTCGCACAC-AAACTTCGAACTGCACTTTTTATCCCTTCATCGC 405
consensus_8972#3      ACAAACATGCACACCA-TCGCACAC-AAACTTCGAACTGCACTTTTTATCCCTTCATCGC 502
consensus_8972#6      GGAAAAATGAACAGATTGTTTAAAC-AAAATAAAACCAG--------------------- 310
consensus_8972#5      AGGAGCACCAGCAGCAATCGGATGCTGAGACGTCTACTGAATTTTAGCGCACTGCGTCCA 455
consensus_8972#0      GCACAGT--CAGTGCAATGGAGAGGGAAACACGAAA-AGAGCATGCCTTGCCGACAGTAT 1061
consensus_8972#4      GCACAGT--CACTGCAATGGAGAGGAAAACACGAAACAGAGCATGCCTTGCCGACAGTAT 418
consensus_8972#2      AAAGGGAAGCAGAATCACGCGAAAGAAGGCAAACATTAGGTTATGTTGTAT-AACATTTC 561
                                                            *                     

consensus_8972#1      TGATTGTATCGA--TGTCTCTTTCCTTCCATTTAAATGCCACATGCCCTAAGATCTCTAT 463
consensus_8972#3      TGATTGTATCGA--TGTCTCTTTCCTCCCATTTAAATGCCACATGCCCTAAGATCTCTAT 560
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      GTGATAAAGCGA--AACAAGCTACTATTC-TACAAACAGCAATCGACTTG-----TCTCG 507
consensus_8972#0      CGTGTTTTTTT--TTGTTCGTGTCTCTTCTTCTCACAAGCAA-GAAGCCG-----C---- 1109
consensus_8972#4      CGTGTACACACAATAGTCCGTGTCTCTTCTTCTCACAAGCAAAGAAGCCG-----C---- 469
consensus_8972#2      NGGATGTAGACA-CAGAACGAACAAATAATAGTTAGTGGTGTAATTGCAA-----CGGGG 615
                                                                                  

consensus_8972#1      TTTAGCAG-CAAATGTTCAAGAG-AGCGATACACGATGTTTGTTATGCAAAA-CGTAACC 520
consensus_8972#3      TTTAGCAG-CAAATGTTCAAGAGCAGCGATACACGATGTTTGTNATGCAAAAACGTAACC 619
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      CTTGGCANACNAAAGTNAAACGCTAGATATAN-CGAAGTATCGTGTGCCGTGTCGCCGCG 566
consensus_8972#0      -CATGCCGGTAAAAGT---AATCGA-TCT----AAGGACTG----CAAAAACACACAC-- 1154
consensus_8972#4      -CATGCCGGTACACNCGTCAATCGAATCTTAACGNGAACTGGC-ACAAAACANCACACAA 527
consensus_8972#2      ACTGGCCGCTGCAGGCATACAGCACGTTCGGAGGGATGTTCACTGCAAAAGGCCGGAAGA 675
                                                                                  

consensus_8972#1      TATCCGTTTGTGC-CATTTCTACCGTCACTGTCGC-TAATAAACGAGTAG-TTTCTACGT 577
consensus_8972#3      TATCCGTTCGTGC-CATTTCTACCGTCACTGTCGC-TAATAAACGAGTAG-TTTCTACGC 676
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      CGCCGTGTCGCGCATGANAGCACAGAGANNGAGACATAGCNAACGNGNTGACCTCTGTGC 626
consensus_8972#0      --GGATCA-GAGCTACT-----GTAATTAAGAG----TNATATNATAT-ATATATATATA 1201
consensus_8972#4      CGGGATCACGAACGCCTAACTGGTAATTTAAAGAAGTTAATACTCCATCATACTTAATTA 587
consensus_8972#2      TCGGGCCCTGGCCGGTT----GCTAGGGGAGAATGCTTATGGCGGGATTGT-CCTNCCCA 730
                                                                                  

consensus_8972#1      T--TGAA-ATTGTGCACTGGT-GGTTCCAT-TGCATCATTGCCATATGGG-CAGCGCAGT 631
consensus_8972#3      TCCTGAACATTGTGCACTGGCANGTTCCATCTGCCTCATTGCCATATGGGGCAGCGCAGT 736
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      CCGCNAN-GTGTCGCACTCGT-NNTGTGAACTG-ATNGCTGCCGTT-------GTCCTGT 676
consensus_8972#0      TA-CATACATATA-TACATATACTAT--ATNNAANGCCANNGCANTTCGT-NA---CTGT 1253
consensus_8972#4      TAATTTACACTTAGCACTTATTCTTCCCATTCATCACNTACATAGTTTTT-CAACGCCAC 646
consensus_8972#2      GGGTGTGTA-GTA-CACGTTGCAGCACCGGGAAAGACGGTNGCANTTAAN-GGTGGGTNC 787
                                                                                  

consensus_8972#1      AAGCAATAAACCAATAGTAAGCCGCCGCTATCCTTAAACAGGAGCTTGATCCCTTTTTTC 691
consensus_8972#3      AAGCAATAAACCAATAGTAAGCCGCCG-TATCCTCAAACAGGGGCTTGATCCCTTT--TC 793
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      CGTAACNACATCAGTAGCC-GTTGCCGAAATCAACATTCATTAACTCGAACACCGNAAAC 735
consensus_8972#0      NCGTGGNANNG----GANGAGCNANAGATNGAAAGANGAATGGNAGA--GCAGA------ 1301
consensus_8972#4      ACGGGGCAAACTTCCGATTCACCTGGCCCCGCANGGGCAACGGGNGA--ACGACGCCCAA 704
consensus_8972#2      AAGGGGAANGGGAATCTTCCATCGGTTAAGTNACATACACCGGGAAAGTNCANGTCACAG 847
                                                                                  

consensus_8972#1      GATCCGTATCGAACACAGTTGTTGCTTCAGGCAGATTGCGCGACTGAATGTAAAATGTGC 751
consensus_8972#3      GATCCGTATCGAACACAGTTGT-GCTTCAG------------------------------ 822
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ACACCNANNCNNNCANANANNANAAA---------------------------------- 761
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      GCAGCACTTTGAGCAAGAAAAAATTTG-----------GCGGACGACGCCACAACACAAA 753
consensus_8972#2      TCCTTTCCCCGTGGTGCACAACANTTTTACCATGTGTTGCCANCNTTGTTCCCAGGCAAG 907
                                                                                  

consensus_8972#1      GTGTGCATGTTCAGGAGAAAATGTCGATATGTCAGGTCAGGATGAGCTATGACGCGCACC 811
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      GCNNGCACAAATCTTGGCAACAATGGGTTGGNGG-------------------------- 787
consensus_8972#2      GNGAGCCCAGTCCGTGCCCGGAGTGCGTTGTGAACG------------------------ 943
                                                                                  

consensus_8972#1      CCATGTGATGGGTTTTCCGTTGTTCCATTCTTATATTTTCCTTCTTTGTTTCATATTGCA 871
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      TTGGTCTAGAGAAAACTAGACCGAACTCTCTACCTACTGTTGCATCGACAGTATCATTAA 931
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      CGTTCACAGACATTCGGCGTATTGGAACGTGTGTATGTGCGTTTGTGTGTAACGTTTGGG 991
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      GGAGAATAGTTTTCTTCCGTTGCGTTTACACAAGCTCCACCTAAACATGGCACTACACTA 1051
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      AACAGCGATACAGTGATGCAGGAGCAGCTTTAGCAGAGCGTTAGAACGGAATGTGACATA 1111
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      AAGCGGAAGAAGGTGTGTACCATGTGTAAGAATAGCGGAACCTTCACCCTTTCCTCCTTG 1171
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      TAATAGCTGTTAAACACTTTAATTTGTGGGGAAGCGGAAAAATGAAAGATTGTTAAACAA 1231
consensus_8972#3      ------------------------------------------------------------
consensus_8972#6      ------------------------------------------------------------
consensus_8972#5      ------------------------------------------------------------
consensus_8972#0      ------------------------------------------------------------
consensus_8972#4      ------------------------------------------------------------
consensus_8972#2      ------------------------------------------------------------
                                                                                  

consensus_8972#1      AATAAAACCAGAAAAGAAAACAGCCGAAAAAAAAAAAAAAAAAAAAAAATGGAAAGGG 1289
consensus_8972#3      ----------------------------------------------------------
consensus_8972#6      ----------------------------------------------------------
consensus_8972#5      ----------------------------------------------------------
consensus_8972#0      ----------------------------------------------------------
consensus_8972#4      ----------------------------------------------------------
consensus_8972#2      ----------------------------------------------------------
                                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)