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Anopheles gambiae
cluster # 8973 cluster # 8973       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8973#0 length = 1004 sequences # 10  
consensus_8973#1 length = 962 sequences # 3  

consensusID : consensus_8973#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1004
fasta sequence
                              [TTTTTGGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATTTTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTT-AAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACG-AACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGC-CG-GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCAC-TCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAA-CTTTTCCGACGGTTCGAGCGAATGGCGCAGCT-G-TTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTGA-TGCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCGAATGCGTTCTCTGTTGCAACCAGTAGGCCAACAGTGCTCGAGGAAAACCGCAGCTTTTAGA]

[-] EMBL CNS09JZR             [TTTTTGGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATTTTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACG AACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCAC TCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAAGCTT                                                                                                                                                                                                     ]
[-] EMBL CNS0939S             [                    gccTTTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATTTTATTGCTAAAAGTGAGGAACACAAGAACACAGTTTATGTTT AAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACG AACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCAC TCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAA CTTTTCCGACGGTTCGAGCGAATGGCGCAGCT G TTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTGA TGCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCGAATGCGTTCTCCGTTGCAAC                                         ]
[+] EMBL CNS0939T             [                                 TTTTTTTTTAGGTTTAAAGCAACATTTTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTT AAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACG AACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAG ACTTCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTTAA CTTTTCCGACGGTTCGAGCGAATGGCGCA CT GTTTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTGGGTTGTATCATGCTGAGGTTGA TGCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCTAATGCGTTCTCTGTTGCAACCAGTAGGCCAACAGTGCTCGAGG                  ]
[+] EMBL CNS09E11             [                                                           TTATTGCTTAAAGTGAGG ACACAAGAACACAGTTTATGTTT AAAAAAAATGCCACCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAGCACATAAAACGCAACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGCGCGCGAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATACGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGC AAACACTTCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTTAA CTTTTCCGACGGTTCGAGCGAATGGCGCA CT GTTTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTGA TGCTATTGCTCCACTTAAT                                                                                      ]
[+] EMBL CNS09O8C             [                                                             ATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTT AAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACG AACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGGTTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAA CAC TCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTTAA CTTTTCCGACGGTTCGAGCGAATGGCGCA CTGG TTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTGA TGCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCGAATGCGTTCTCTGTTGCAACCAGTAGGCCAACAG                           ]
[+] EMBL CNS09RND             [                                                                                                                                            TGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACG AACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAA CAC TCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAA CTTTTCCGACGGTTCGAGCGAATGGCGCA CT GTTTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTGA TGCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCGAATGCGTTCTCTGTTGCAACCAGTAGGCCAACAGTGCTCGAAAAAAACCGCAGCTTTTAGA]
[-] EMBL BX625544             [                                                                                                                                                                                                             ACTATTTTTAACACATAAAACG AACACACAAACAGAAACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCACCGTCCACCGTACCAGCGACGATCTGCAGCCGGCCCGACTCCGCGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCAC TCGTCCCGAACGCAGGATGAAACGCAGTTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAA CTTTTCCGACGGTTCGAGCGAATGGCGCAGCT G TTTGGTTTTCTCCTTCGCTAACAGCAGGACGCGGGTTGGTTGTATCATGCTGAGGTTGA TGCTATTGCTCCACTGAATGGCTTGTCCTGT                                                                          ]
[-] EMBL BX620057             [                                                                                                                                                                                                                                                                    TCACTACACATCGGTACAATTGAGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCNTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGATCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCACCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGCATCCGCGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCTCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCAC TCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAA CTTTTCCGACGGTTCGAGCGAATGGCGCAGCT G TTTGGTTTTCTCCTTCGCTAGCAGC                                                                                                                                            ]
[-] EMBL CNS09E10             [                                                                                                                                                                                                                                                                                                               gaCTACTGCTTGGCGGTGAAGAAGAACAGCCCCTCCAGGTAGGTGAGAAACACCGACGAGAACAGAATGTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGATTTTTTTCTTGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGGGTACCCGCCCGCCCCGCCCGGCCTTGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCAC TCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAA CTTTTCCGACGGTTCGAGCGAATGGCGCAGCT G TTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTGAGTGCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCGAAT                                                          ]
[+] EMBL CNS09JZS             [                                                                                                                                                                                                                                                                                                                                     AGAACAGCCCCTCCCGGTAGGTGAAAAACACCGACGAGCACAGAATTTCGGAGGATTGGTCCGCGC CG GAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCCCCCGTCCACCGTACCAACGACGATTTGCAACCGGCCCGACTCCACGTCTCGTTCCCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_8973#0 TTTTTGGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATTT TATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAATGCCATCACTT TCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTT TTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACGAACACACAAACAGA TACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGC CGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGA GCACAGAATGTCGGAGGATTGGTCCGCGCCGGAATCGTTCGCAGCACGCAGCACCACCCG CCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCG CTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCAC GTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGCG CTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACGC AGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACAT GGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGGT GAGGAAGCGGTCCAGCTTGCAAGTGAACTTTTCCGACGGTTCGAGCGAATGGCGCAGCTG TTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTGAT GCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCGAATGCGTTCTCTGTTGC AACCAGTAGGCCAACAGTGCTCGAGGAAAACCGCAGCTTTTAGA



consensusID : consensus_8973#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 962
fasta sequence
                              [CCCCCGCAGCTCGGGCACATGTGCCCTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATTTTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTCACACATAAAACGCACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGGTTGGTCCGCGCCGGAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGC---CGCCGTCCACCGTACCAGCGACGATCTGCAACC-GGCCCG-ACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTT-GAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACC-C-TCGCTCGCTACCACCACATCGGAC-GGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAG-CCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAACTTTTCCGACGGTTCGAGCGAATGGGCGCAGCTGTTTGGTTTTCTCCTTCGCTAGCAGCAGGACGCGGGTTGGTTGTATCATGCTGAGATTGATGCTATTGCTCCACTGTATGGCTTGTTGTGTTCTCCGAATGTGTTTANACCTCGGGGCGAT]

[-] EMBL CNS09O8B             [CCCCCGCAGCTCGGGCACATGTGCCCTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATTTTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTCACACATAAAACGCACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGGTTGGTCCGCGCCGGAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGC   CCCCGTCCACCGTACCAGCGACGATCTGCAACC GGCCCG ACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTT GAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACC C TCGCTCGCTACCACCACATCGGAC GGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAG CCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAACTT                                                                                                                                                       ]
[-] EMBL CNS09RNC             [                  ATGTGGCCTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATTTTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAATGCCATCACTTTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGTTTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACGAACACACAAACAGATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCGCCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACGAGCACAGAATGTCGGAGGATTGGTCCGCGCCGGAATCGTTCGCAGCACGCAGCACCACCCGCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCCGCTTATCGATCTGGCGCGCGCCGTCCACCGTACCAGCGACGATCTGCAACC GGCCCG ACTCCACGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTT GAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACCGCTTCGCTCGCTACCACCACATCGGAC GGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAG CCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAACTTT                                                                                                                                                      ]
[-] EMBL AL932945             [                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCCTTGCCCTGCCGATCGAACCGCCGTACACTTTCCGCTTATCGATCTGGC   CACCGTCCACCGTACCAGCGACGATCTGCAACCGGGCCCGCAATCCGCGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCTCCGCCCGGCCTTGGAGCGCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACGCAGGATGAAACGCAGCTTGCGGTCTACC C TCGCTCGCTACCACCACATCGGACGGGGAACATGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCCTGGTAGACGGTGAGGAAGCGGTCCAGCTTGCAAGTGAACTTTTCCGACGGTTCGAGCGAATGGGCGCAGCTGTTTGGTTTTCTCCTTCGCTAGCAGCAGGACGCGGGTTGGTTGTATCATGCTGAGATTGATGCTATTGCTCCACTGTATGGCTTGTTGTGTTCTCCGAATGTGTTTANACCTCGGGGCGAT]


>consensus_8973#1 CCCCCGCAGCTCGGGCACATGTGCCCTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATT TTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAATGCCATCACT TTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGT TTTTTGGGGTGGAAATCACTTAAACACTATTTTTCACACATAAAACGCACACACAAACAG ATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCG CCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACG AGCACAGAATGTCGGAGGGTTGGTCCGCGCCGGAATCGTTCGCAGCACGCAGCACCACCC GCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCC GCTTATCGATCTGGCCGCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCA CGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGC GCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACG CAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACA TGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGG TGAGGAAGCGGTCCAGCTTGCAAGTGAACTTTTCCGACGGTTCGAGCGAATGGGCGCAGC TGTTTGGTTTTCTCCTTCGCTAGCAGCAGGACGCGGGTTGGTTGTATCATGCTGAGATTG ATGCTATTGCTCCACTGTATGGCTTGTTGTGTTCTCCGAATGTGTTTANACCTCGGGGCG AT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8973#0      -TTTTTGGCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATT 59
consensus_8973#1      CCCCCGCAGCTCGGGCACATGTGCCCTTTTTTTTTTTTTTTTTAGGTTTAAACAAACATT 60
                               *         * *    **********************************

consensus_8973#0      TTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAATGCCATCACT 119
consensus_8973#1      TTATTGCTTAAAGTGAGGAACACAAGAACACAGTTTATGTTTAAAAAAAATGCCATCACT 120
                      ************************************************************

consensus_8973#0      TTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGT 179
consensus_8973#1      TTCCACTTGTGTAAGGCACGTGGCTTTAAGCTCCAGTACAGTAATGGTTCACGCAAAAGT 180
                      ************************************************************

consensus_8973#0      TTTTTGGGGTGGAAATCACTTAAACACTATTTTTAACACATAAAACGAACACACAAACAG 239
consensus_8973#1      TTTTTGGGGTGGAAATCACTTAAACACTATTTTTCACACATAAAACGCACACACAAACAG 240
                      ********************************** ************ ************

consensus_8973#0      ATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCG 299
consensus_8973#1      ATACATTTCTGAGGTGATTTCACTACACATCGGTACAATTGCGTTCCCGCGCTGTTCCCG 300
                      ************************************************************

consensus_8973#0      CCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACG 359
consensus_8973#1      CCGGCTGCTGCTTGGCGGTGTTGAAGAACAGCCCCTCCCGGTAGGTGAGAAACACCGACG 360
                      ************************************************************

consensus_8973#0      AGCACAGAATGTCGGAGGATTGGTCCGCGCCGGAATCGTTCGCAGCACGCAGCACCACCC 419
consensus_8973#1      AGCACAGAATGTCGGAGGGTTGGTCCGCGCCGGAATCGTTCGCAGCACGCAGCACCACCC 420
                      ****************** *****************************************

consensus_8973#0      GCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCC 479
consensus_8973#1      GCCGGGGACTCCGGCCATGCGGTTTCCTTGCCCTGCCGACCGAACCGCCGTACACTTTCC 480
                      ************************************************************

consensus_8973#0      GCTTATCGATCTGGCCCCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCA 539
consensus_8973#1      GCTTATCGATCTGGCCGCCGTCCACCGTACCAGCGACGATCTGCAACCGGCCCGACTCCA 540
                      **************** *******************************************

consensus_8973#0      CGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGC 599
consensus_8973#1      CGTCTCGTTCCCTCGCCGTGCCAGCAATCGCGTACCCGCCCGCCCCGCCCGGCCTTGAGC 600
                      ************************************************************

consensus_8973#0      GCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACG 659
consensus_8973#1      GCTGATACTTCTCCGACCAATCCTGCTGGTGCCGTTTGAGCGAAGCACTCGTCCCGAACG 660
                      ************************************************************

consensus_8973#0      CAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACA 719
consensus_8973#1      CAGGATGAAACGCAGCTTGCGGTCTACCCTCGCTCGCTACCACCACATCGGACGGGAACA 720
                      ************************************************************

consensus_8973#0      TGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGG 779
consensus_8973#1      TGGCACTCATCCGCTTGGGGAACAGCTTCGGCTTCAGCCTGTTGTAGCCCTGGTAGACGG 780
                      ************************************************************

consensus_8973#0      TGAGGAAGCGGTCCAGCTTGCAAGTGAACTTTTCCGACGGTTCGAGCGAATGG-CGCAGC 838
consensus_8973#1      TGAGGAAGCGGTCCAGCTTGCAAGTGAACTTTTCCGACGGTTCGAGCGAATGGGCGCAGC 840
                      ***************************************************** ******

consensus_8973#0      TGTTTGGTTTTCTCCTTCGCTAGCAGCAGCACGCGGGTTGGTTGTATCATGCTGAGGTTG 898
consensus_8973#1      TGTTTGGTTTTCTCCTTCGCTAGCAGCAGGACGCGGGTTGGTTGTATCATGCTGAGATTG 900
                      ***************************** ************************** ***

consensus_8973#0      ATGCTATTGCTCCACTGAATGGCTTGTCCTGTGTTGTGTTCTCCGAATGCGTTCTCTGTT 958
consensus_8973#1      ATGCTATTGCTCCACTGTATGGCTTGT-------TGTGTTCTCCGAATGTGTTTANACCT 953
                      ***************** *********       *************** ***      *

consensus_8973#0      GCAACCAGTAGGCCAACAGTGCTCGAGGAAAACCGCAGCTTTTAGA 1004
consensus_8973#1      CGGGGCGAT------------------------------------- 962
                           *  *                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)