cluster # 8980

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Anopheles gambiae
cluster # 8980 cluster # 8980 Sequences # 13 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8980#0 length = 1357 sequences # 8
consensus_8980#1 length = 581 sequences # 1

consensus_8980#2 length = 537 sequences # 2
consensus_8980#3 length = 335 sequences # 1
consensus_8980#4 length = 146 sequences # 1

consensusID : consensus_8980#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1357
fasta sequence

                              [CAGATTCGCCCCGAGGTGAGGTGTAAGTCT-CAGTGCAGCAAAACCAGCAACGATGG-CGACCGTAAGATAACGCCCATGTTCAACGACTACGTGTACGAGGCGATCCGCCGGATCGCGGTCGAGCAGGGCTTTACGCC-GGATCTGTTTTCGGTCGACTTC-GACGAGGAGACGCGCCTGG-AGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTTACGCTGTGGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGTCTGTCGGAGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGACAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGTTGATCACGATGAGGACGCGCTTCGAGTCGGAACTGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGAGT--TTGAAGAAGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTCACGCACGGTGACTGCTGGATCAACAATCTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTGACGGACTGGCAATCGTCCCGG-TACGCTTCGCCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGCACCACTACCACGGTGCGCTGG-CGGACTTTCTGGCCAAACTTGGTGGAGATGCGGCGCGGCAGTTCCCGCTCACCACTCTGCTGAGGCTGATGAAGCCGTACCGTGATCTGCTCGGGAGCTAGTCGCATGCGTTTCCCGTGCATCGCGCACAGTGTCTGTGAAACGCGTTGTTTGCAACTGTGACCGCATCCGGAAGCGATCTTGGACCCCTTTGGTCGATCTGATGCGTGATGCGCGGGATTCCATCGTTAGGAAACAGTACGGTTCGATGGTGTGCTGCTGGCGTGGAGCACTTTACATGGTCTCTACGTACGAGACATACCCCCAAAGCGGGGG-TCTCTGAGGGATTGAATGCACCATAAATAAAGAAAAAAGAGA]

[+] EMBL AL696890             [CAGATTCGCCCCGAGGTGAGGTGTAAGTCT CAGTGCAGCAGAACCAGCAGCGATGG CGACCGTAAGAT ACG CCATGTTCAACGACTACGTGTACGAGGCGATCCG CGGATCGCGGTCGAGCA GGCTTTACGCC GGATCTGTTTTCGGTCGACTTC GACGAGGAGACGCGCCTGG AGTGCGACGGGTACGTGAGCTTCGTCTTCAAGG CATCATCAACGGGGACGATCGGGAGTTTACACTGTGGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTT CAGGCGGAGAAGGGTCTGTCGGAGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTAATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AL929674             [      taatgcgtaGTGCGGTGT AGTCTCCAGTGCAGCAAGTCCAGCAACGATGG CGA CGTAAGATAACGCCCATGTTCAACGACTACGTGTACGAAGCGATCCGCCGGATCGCGGTCGAGCAGGGCTTTACGCCGGGATCTGTTTTCGGTCGACTTCGGACGAGGAGACGCGCCTGGTAGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGGCATCATCAACGGGGACGATCNGGAGTTTACGCTGTGGTGTAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS08ETA             [                                       ttAAGCCAGCAACGATGGCCGACCGTAAGATAACGCCCATGTTCAACGACTACGTGTACGAGGCGATCCGCCGGATTGCGGTCGAGCAGGGCTTTACGCC GGATCTGTTTTCGGTCGACTTT GACGAGGAGACGCGCCTGG AGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTTACGCTGTGGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGTCTGTCGGAGGAGTCGGGCGACGAGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGACAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGTTGATCACGATGAGGACGCGCTTCGAGTCGGAACTGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGAGT  TTGAAGAAGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTCACGCACGGTGACTGCTGGATCAACAATTTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTGACGGACTGGCAATCGTCCCGG TACGCTTCGCCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACA                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08HA8             [                                                CAACGATGGCCGACCGTAAGATAACGCCCATGTTCAACGACTACGTGTACGAGGCGATCCGCCGGATTGCGGTCGAGCAGGGCTTTACGCC GGATCTGTTTTCGGTCGACTTT GACGAGGAGACGCGCCTGG AGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTTACGCTGTGGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGTCTGTCGGAGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGACAGCCGGACTCGGCGTTGATCACGCTGATGAAAAAATCGTTCGATCGGGCGTTGATCACGATGAGGACGCGCTTCGAGTCGGAACTGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGAGT  TTGAAGAAGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTCACGCACGGTGACTGCTGGATCAACAATCTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTGACGGACTGGCAATCGTCCCGG TACGCTTCGCCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGCACCACTACCACGGTGCGCTGGCCGGACTTTCTGGCCAA                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX620032             [                                                                  AGATAACGCCCATGTTCAACGACTACGTGTACGAGGCGATCCGCCGGATCGCGGTCGAGCAGGGCTTTACGCC GGATCTGTTTTCGGTCGACTTC GACGAGGAGACGCGCCTGG AGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTTACACTGTGGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAAGGTCTGTCGGAGGAGTCNGGCGACGGGTTCTATGCGACGCCCCAGTGCTATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08HA9             [                                                                                                                                                                                                                                                                                                                                                                                                                   CAAGTGCTTTTTGGCAAACTGCAACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGAACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGACAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGTTGATCACGATGAGAACGCGCTTCGAGTCGGAACTGGAGCGTATCGTCTTTTTGAAGGATGCAGTGTTTGAGAGT  TTGAAGAAGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTAACGCACGGTGACTGCTGGATCAACAATCTCATCAACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTGACGAACTGGCAATCGTCCCGGTTACCGTTCGCCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGCACCACTACCACGGTGCGCTGG CGGACTTTCTGGCCAAACTTGGTGGAGATGCGGCGCGGCAGTTCCCGCTCACCACTCTGCTGAGGCTGATGAAGCCGTACCGTGATCTGCTCGGGAGCTAGTCGCATGCGTTTCCCGTGCATCGCGCACAGTGTCTGTGAAACGCGTTGTTTGCAGCTGTGACCGCATCCGGAAGCGATCTTGGACCCCTTTGGTCGATCTGATGCGTGATGCGCGGGATTCCATCGTTAGGAAACAGTACGGTTCGATGGTGTGCTGCTGGCGTGGAGCACTTTACATGGTCTCTACGTACGAGACATACCCCCAAAGCGGGGG TCTCTGAGGGATTGAA                          ]
[-] EMBL CNS08ETB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTCGAGAAGTGGAACTGGGACAAGCTGGAACCGATCAACGTGGGGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGACAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGTTCGGGCGTTGATCACGATGAGAACGCGCTTCGAGTCGGAACTGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGAGT  TTGAAGAAGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTCACGCACGGTGACTGCTGGATCAACAATTTCATCAACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTGACGGACTGGCAATCGTCCCGGTTAC CTTCGCCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGCACCACTACCACGGTGCGCTGG CGGACTTTCTGGCCAAACTTGGTGGAGATGCGGCGCGGCAGTTCCCGCTCACCACTCTGCTGAGGCTGATGAAGCCGTACCGTGATCTGCTCGGGAGCTAGTCGCATGCGTTTCCCGTGCATCGCGCACAGTGTCTGTGAAACGCGTTGTTTGCAACTGTGACCGCATCCGGAAGCGATCTTGGACCCCTTTGGTCGATCTGATGCGTGATGCGCGGGATTCCATCGTTAGGAAACAGTACGGTTCGATGGTGTGCTGCTGGCGTGGAGCACTTTACATGGTCTCTACGTACGAGACATACCCCCAAAGCGGGGGTTCTCTGAGGGGTTGAATGCACCATAAATAAAGAAAAAAGAGA]
[+] EMBL AL930193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    atgcccGAGGGTAGTTG AGACGTGTTGCGATCCGACCACGGCAGAA CGTACTGTGTCGTCACGCACGGTGACTGGTGGATCAACAATCTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTAACCGACTGG AATCGTCCCGG TACGCTTCG CCATCCTCGA CTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAG CTG TGCACCACTACCACGGTGCGCTGG CGGACTTTCTGGCCAAACTTGGTGGAGATGCGGCGCGTCAGTTCCCGCTCACCACTCTGCTGAGGCTGATGAAGCCGTACCGTGATCTGCTCGGGAGCTAGTCGCATGCGTTTCCCGCGCATCGCGCACAGTGTCTGTGAAACGCGTTGTTTGCAACTGTGACCGCATCCGGAAGTGATCTTGGACCCCTTTGGTTGATCTGATa                                                                                                                                                         ]




>consensus_8980#0
CAGATTCGCCCCGAGGTGAGGTGTAAGTCTCAGTGCAGCAAAACCAGCAACGATGGCGAC
CGTAAGATAACGCCCATGTTCAACGACTACGTGTACGAGGCGATCCGCCGGATCGCGGTC
GAGCAGGGCTTTACGCCGGATCTGTTTTCGGTCGACTTCGACGAGGAGACGCGCCTGGAG
TGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTT
ACGCTGTGGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGC
GAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGT
CTGTCGGAGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGC
AACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAG
AAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAG
CAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTC
GAGCAGTACAAGCGGGCCGGACAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCG
TTCGATCGGGCGTTGATCACGATGAGGACGCGCTTCGAGTCGGAACTGGAGCGTATCGTC
GCCGTGAAGGATGCAGTGTTTGAGAGTTTGAAGAAGTGTTGCGATCCGACCACGGCAGAA
CCGTACTGTGTCGTCACGCACGGTGACTGCTGGATCAACAATCTCATCTACTCGCATAAT
GAGAACAACGTGGCAACGGGGGTTATCTTGACGGACTGGCAATCGTCCCGGTACGCTTCG
CCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGAC
AATATGGACAGCCTGCTGCACCACTACCACGGTGCGCTGGCGGACTTTCTGGCCAAACTT
GGTGGAGATGCGGCGCGGCAGTTCCCGCTCACCACTCTGCTGAGGCTGATGAAGCCGTAC
CGTGATCTGCTCGGGAGCTAGTCGCATGCGTTTCCCGTGCATCGCGCACAGTGTCTGTGA
AACGCGTTGTTTGCAACTGTGACCGCATCCGGAAGCGATCTTGGACCCCTTTGGTCGATC
TGATGCGTGATGCGCGGGATTCCATCGTTAGGAAACAGTACGGTTCGATGGTGTGCTGCT
GGCGTGGAGCACTTTACATGGTCTCTACGTACGAGACATACCCCCAAAGCGGGGGTCTCT
GAGGGATTGAATGCACCATAAATAAAGAAAAAAGAGA

consensusID : consensus_8980#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 581
fasta sequence

                              [TCCCCCGAGGTTATGGAGTCAACGAAGCGTCCAGAAGTGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGCCAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGTTGATCACGATGAGGACGCGCTTCGAGTCGGAACAGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGAGTTTGAAGACGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTCACGCACGGTGACTGCTGGATCAACAATCTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTAACCGACTGGCAATCGTCCCGGTACGCTTCGCCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGACCACTACCACGGTGCGCTGGCGGACTTCTGGCCAAACTTGGTGGAGATG]

[+] EMBL AL933501             [TCCCCCGAGGTTATGGAGTCAACGAAGCGTCCAGAAGTGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGCCAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGTTGATCACGATGAGGACGCGCTTCGAGTCGGAACAGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGAGTTTGAAGACGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTCACGCACGGTGACTGCTGGATCAACAATCTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATCTTAACCGACTGGCAATCGTCCCGGTACGCTTCGCCCATCCTCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGACCACTACCACGGTGCGCTGGCGGACTTCTGGCCAAACTTGGTGGAGATG]




>consensus_8980#1
TCCCCCGAGGTTATGGAGTCAACGAAGCGTCCAGAAGTGGACTGGGACAAGCTGGAACCG
ATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCTCG
TTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGCCAGCCG
GACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGTTGATCACGATGAGG
ACGCGCTTCGAGTCGGAACAGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGAGT
TTGAAGACGTGTTGCGATCCGACCACGGCAGAACCGTACTGTGTCGTCACGCACGGTGAC
TGCTGGATCAACAATCTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGTTATC
TTAACCGACTGGCAATCGTCCCGGTACGCTTCGCCCATCCTCGACCTGTGCTACTTCTTC
TTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGACCACTACC
ACGGTGCGCTGGCGGACTTCTGGCCAAACTTGGTGGAGATG

consensusID : consensus_8980#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 537
fasta sequence

                              [ATCCCCGAGGTTTATTTACGCCGGATCTGTTTTCGGTCGACTTCGACGAGGAGACGCGCCTGGAGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTTACACTGTGTGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGTCTGTCGGAGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTAATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGCTGNGNANGCATACGCGGCTGGCTGACTGGACGCACGCTGGGCCGCTCTTGCATGCGCTCTCGCTATATGCNNACTGNAACGCGACGCAGCGCGCCGGCAGCTGCTTCGAGCCAGCTACAAGCGGGCCGGCCAGCCG]

[+] EMBL AL694794             [ATCCCCGAGGTTTATTTACGCCGGATCTGTTTTCGGTCGACTTCGACGAGGAGACGCGCCTGGAGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTTACACTGTGTGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGTCTGTCGGAGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTAATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGCTGNGNANGCATACGCGGCTGGCTGACTGGACGCACGCTGGGCCGCTCTTGCATGCGCTCTCGCTATATGCNNACTGNAACGCGACGCAGCGCGCCGGCAGCTGCTTCGAGCCAGCTACAAGCGGGCCGGCCAGCCG]
[+] EMBL BX604481             [                                                                                                                                                                                                           CGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGTCTGTCGGAGGAGTCGGGCGACGGGTTCTACGCGACGCCCAAGGGCTATCTGGCACACGGCAACACGGACGCGCCGGAG                                                                                                                                                                                                                     ]




>consensus_8980#2
ATCCCCGAGGTTTATTTACGCCGGATCTGTTTTCGGTCGACTTCGACGAGGAGACGCGCC
TGGAGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGG
AGTTTACACTGTGTGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTC
AAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAG
AAGGGTCTGTCGGAGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCA
CACTGCAACACGGACGCGCCGGAGCCGGAAGCACTAATCATGCTGGAGTACAACGAAGCG
TTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGCTGNGNANGCATACGCGGCT
GGCTGACTGGACGCACGCTGGGCCGCTCTTGCATGCGCTCTCGCTATATGCNNACTGNAA
CGCGACGCAGCGCGCCGGCAGCTGCTTCGAGCCAGCTACAAGCGGGCCGGCCAGCCG

consensusID : consensus_8980#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 335
fasta sequence

                              [CAGAATCGGCCACGAGGTGTCGGAGGAGTCGGGCGATGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCGATGCGCTCTCGTTTGCGATGAAGGAGCAGGCGGCCGGAGCTGTTCGAGCAGGTACAAGCGGGACCGGACAGCCAGGACTCGGCGGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGT]

[+] EMBL BX468705             [CAGAATCGGCCACGAGGTGTCGGAGGAGTCGGGCGATGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCGATGCGCTCTCGTTTGCGATGAAGGAGCAGGCGGCCGGAGCTGTTCGAGCAGGTACAAGCGGGACCGGACAGCCAGGACTCGGCGGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGT]




>consensus_8980#3
CAGAATCGGCCACGAGGTGTCGGAGGAGTCGGGCGATGGGTTCTATGCGACGCCCAAGTG
CTATCTGGCACACTGCAACACGGACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTA
CAACGAAGCGTTCGAGAAGTGGGACTGGGACAAGCTGGAACCGATCAACGTGGAGCATAC
GCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCGATGCGCTCTCGTTTGCGATGAAGGAGC
AGGCGGCCGGAGCTGTTCGAGCAGGTACAAGCGGGACCGGACAGCCAGGACTCGGCGGTT
GATCACGCTGATGAAGGAATCGTTCGATCGGGCGT

consensusID : consensus_8980#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 146
fasta sequence

                              [TNGTCTCCAGTGCAGCAGAACCCAGCAGCGATGGCCGACCGTAAGATAACGCCCATGTTACAANCGNCTACGTGTACGAGGNCGATCCGCCGGATCGCGGTCGAGCAGGGACTTTACGNCCGGATCTGTTTTCGGTCGACTTCGAN]

[+] EMBL BX619945             [TNGTCTCCAGTGCAGCAGAACCCAGCAGCGATGGCCGACCGTAAGATAACGCCCATGTTACAANCGNCTACGTGTACGAGGNCGATCCGCCGGATCGCGGTCGAGCAGGGACTTTACGNCCGGATCTGTTTTCGGTCGACTTCGAN]




>consensus_8980#4
TNGTCTCCAGTGCAGCAGAACCCAGCAGCGATGGCCGACCGTAAGATAACGCCCATGTTA
CAANCGNCTACGTGTACGAGGNCGATCCGCCGGATCGCGGTCGAGCAGGGACTTTACGNC
CGGATCTGTTTTCGGTCGACTTCGAN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8980#0      ------------------------------------------------------------
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ATCCCCGAGGTTTATTTACGCCGGATCTGTTTTCGGTCGACTTCGACGAGGAGACGCGCC 60
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      --TCCCCCGAGGTTATGGAGTCAACGAAGCGTCCAGAAGTGGACTGGGACAAGCTGGAAC 58
                                                                                  

consensus_8980#0      ------------------------------------------------------------
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      TGGAGTGCGACGGGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGG 120
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      CGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGGGCCGTCTGCATGCGCTCT 118
                                                                                  

consensus_8980#0      ------------------------------------------------------------
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      AGTTTACACTGTGTGTGCAAGGTGCCG------CCGAACGGTGACGAACGTTCGCTCGAG 174
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      CGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGTACAAGCGGGCCGGCCAGC 178
                                                                                  

consensus_8980#0      ------------------------------------------------------------
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      CTGTTCAAGCGCGAGTGCTTCTTCTACCGCGAAACGCTGCACGGGTTCTA--CGAGTTCC 232
consensus_8980#3      ----------------------------------------------------------CA 2
consensus_8980#1      CGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATCGGGCGTTGATCACGATGA 238
                                                                                  

consensus_8980#0      ------------------------------------CAGATTCGCCCCGAGGTGAGGTGT 24
consensus_8980#4      -----------------------------------------------------------T 1
consensus_8980#2      AGGCGGAGAAGGGTCTGTCGGAGGAGT---CGGGCGACGGGTTCTATGCGACGCCCAAGT 289
consensus_8980#3      GAATCGGCCACGAGGTGTCGGAGGAGT---CGGGCGATGGGTTCTATGCGACGCCCAAGT 59
consensus_8980#1      GGACGCGCTTCGAGTCGGAACAGGAGCGTATCGTCGCCGTGAAGGATGCAGTGTTTGAGA 298
                                                                                  

consensus_8980#0      AAGTCTCAGTGCAGCAAAACC-AGCAACGATGGC-GACCGTAA---GATAACGCCCATG- 78
consensus_8980#4      NGTCTCCAGTGCAGCAGAACCCAGCAGCGATGGCCGACCGTAA---GATAACGCCCATG- 57
consensus_8980#2      GCTATCTGGCACACTGCAACACGGACGCGCCGG--AGCCGGAA---G-CACTAATCATG- 342
consensus_8980#3      GCTATCTGGCACACTGCAACACGGACGCGCCGG--AGCCGGAA---G-CACTGATCATG- 112
consensus_8980#1      GTTTGAAGACGTGTTGCGATCCGACCACGGCAG--AACCGTACTGTGTCGTCACGCACGG 356
                                        *        **   *    *** *    *        ** * 

consensus_8980#0      ---TTC--A-ACGACTACGTGTACGAGGC-GATCCGCCGGATCGCGGTCGAGCAGG--G- 128
consensus_8980#4      ---TTACAA-NCGNCTACGTGTACGAGGNCGATCCGCCGGATCGCGGTCGAGCAGG--GA 111
consensus_8980#2      ---CTGGAGTACAACGAAGCGTTCGAGAA-GTGGGACTGGGACAAGCTGGAACCGATCAA 398
consensus_8980#3      ---CTGGAGTACAACGAAGCGTTCGAGAA-GTGGGACTGGGACAAGCTGGAACCGATCAA 168
consensus_8980#1      TGACTGCTGGATCAACAATCTCATCTACTCGCATAATGAGAACAACGTGGCAACGGGGGT 416
                          *           *             *        *  *    * *    *     

consensus_8980#0      CTTTACGCC-GGATCTGTTTTCGGTCGACTTCGACGAGGAGACGCGCCTGGAGTGCGACG 187
consensus_8980#4      CTTTACGNCCGGATCTGTTTTCGGTCGACTTCGAN------------------------- 146
consensus_8980#2      CGCTGNGNANGCATACGCGGCTGGCTGACTGGACGCACGCTGGGCCGCTCTTGCATGCGC 458
consensus_8980#3      CGT----GGAGCATACGCGGCTGG-TGATGGAGCA---GCTGGGCCG-TCTGCGATGCGC 219
consensus_8980#1      TATCTTAACCG-ACTGGCAATCGTCCCGGTACGCTTCGCCCATCCTCGACCTGTGCTACT 475
                                * *   *     *                                     

consensus_8980#0      GGTACGTGAGCTTCGTCTTCAAGGCCATCATCAACGGGGACGATCGGGAGTTTACGCTGT 247
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      TCTCGCTATATGCNNACTGNAACGCGACGCAGCGCGCCGGCAGCTGCTTCGAGCCAGCTA 518
consensus_8980#3      TCTCGTT---TGCGA--TGAA----GGAGCAG-GCGGCCGGAGCTG-TTCGAGC-AGGTA 267
consensus_8980#1      TCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGGACAGCCTGCTGACCA 535
                                                                                  

consensus_8980#0      GGTGCAAGGTGCCGCCGAACGGTGACGAACGTTCGCTCGAGCTGTTCAAGCGCGAGTGCT 307
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      CAAGCGGG-CCGGCCAGCCG---------------------------------------- 537
consensus_8980#3      CAAGCGGGACCGGACAGCCAGGACTCGGCGGTTGATCACGCTGATGAAGGAATCGTTCGA 327
consensus_8980#1      CTACCACGGTGCGCTGGCGGACTTCTGGCCAAACTTGGTGGAGATG-------------- 581
                                                                                  

consensus_8980#0      TCTTCTACCGCGAAACGCTGCACGGGTTCTACGAGTTCCAGGCGGAGAAGGGTCTGTCGG 367
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      TCGGGCGT---------------------------------------------------- 335
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      AGGAGTCGGGCGACGGGTTCTATGCGACGCCCAAGTGCTATCTGGCACACTGCAACACGG 427
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      ACGCGCCGGAGCCGGAAGCACTGATCATGCTGGAGTACAACGAAGCGTTCGAGAAGTGGG 487
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      ACTGGGACAAGCTGGAACCGATCAACGTGGAGCATACGCGGCTGGTGATGGAGCAGCTGG 547
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      GCCGTCTGCATGCGCTCTCGTTTGCGATGAAGGAGCAGCGGCCGGAGCTGTTCGAGCAGT 607
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      ACAAGCGGGCCGGACAGCCGGACTCGGCGTTGATCACGCTGATGAAGGAATCGTTCGATC 667
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      GGGCGTTGATCACGATGAGGACGCGCTTCGAGTCGGAACTGGAGCGTATCGTCGCCGTGA 727
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      AGGATGCAGTGTTTGAGAGTTTGAAGAAGTGTTGCGATCCGACCACGGCAGAACCGTACT 787
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      GTGTCGTCACGCACGGTGACTGCTGGATCAACAATCTCATCTACTCGCATAATGAGAACA 847
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      ACGTGGCAACGGGGGTTATCTTGACGGACTGGCAATCGTCCCGGTACGCTTCGCCCATCC 907
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      TCGACCTGTGCTACTTCTTCTTCATCTCGGCCGGGGAACAGTTCCGGCGCGACAATATGG 967
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      ACAGCCTGCTGCACCACTACCACGGTGCGCTGGCGGACTTTCTGGCCAAACTTGGTGGAG 1027
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      ATGCGGCGCGGCAGTTCCCGCTCACCACTCTGCTGAGGCTGATGAAGCCGTACCGTGATC 1087
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      TGCTCGGGAGCTAGTCGCATGCGTTTCCCGTGCATCGCGCACAGTGTCTGTGAAACGCGT 1147
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      TGTTTGCAACTGTGACCGCATCCGGAAGCGATCTTGGACCCCTTTGGTCGATCTGATGCG 1207
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      TGATGCGCGGGATTCCATCGTTAGGAAACAGTACGGTTCGATGGTGTGCTGCTGGCGTGG 1267
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      AGCACTTTACATGGTCTCTACGTACGAGACATACCCCCAAAGCGGGGGTCTCTGAGGGAT 1327
consensus_8980#4      ------------------------------------------------------------
consensus_8980#2      ------------------------------------------------------------
consensus_8980#3      ------------------------------------------------------------
consensus_8980#1      ------------------------------------------------------------
                                                                                  

consensus_8980#0      TGAATGCACCATAAATAAAGAAAAAAGAGA 1357
consensus_8980#4      ------------------------------
consensus_8980#2      ------------------------------
consensus_8980#3      ------------------------------
consensus_8980#1      ------------------------------