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Anopheles gambiae
cluster # 9006 cluster # 9006       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9006#0 length = 813 sequences # 11  
consensus_9006#1 length = 712 sequences # 1  
consensus_9006#2 length = 329 sequences # 1  

consensusID : consensus_9006#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 813
fasta sequence
                              [CCGCACCAGGTGTGATAGAATGAAGTTCTTAGTGTTTGCCATTGTGTTAAGTGTGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTCGAGAAAACGGGCTTCATG-AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTGGGCCGGCGAGAACGGGAAGCGATAATGAGCCAGATTAAATGCTCGTCTGGAGATTATTCAGTGAAGGGAGTAAAAAGTGTGCC-TTTGCGTGCGGGTAGTTCTCATCAATGATTCAAAGTGCTTTGTTCTAAAAAGAANGCAATTTGTATGTCTCCTGTAGTTCCCA]

[+] EMBL BM618991             [CCGCAACAGGTGTGATAGAATGAAGTTCTTAGTGCTTGCCATTGTGTTAAGTGTGATCTGCTTGGATGCACTGGTCGATGGAGCAGCAGCACCGCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTCGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTGGGCCGGCGAGAACGGGAAGCGAT                                                                                                                                                ]
[+] EMBL BM656765             [     CCGGGTGTGATAGAATGAAGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATGAAACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGCCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTC                                                                                                                                                                                                    ]
[+] EMBL BM617559             [    ccgAGGTGTGATAGAATGAAGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAAT                                                                                                                                                                                                                                                                         ]
[+] EMBL BX603258             [       AGGTGTGATAGAATGAAGTTCTTAGTGTTTGCCATTGTGTTAAGTGTGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGC AAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTCGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCTACATATGAGTGTGATCTGTTCAATA                                                                                                                                                                                                                                                                            ]
[+] EMBL BM639472             [      ccGGTGTGATAGAATGAAGTTCTTAGTGCTTGCCATTGTGTTAAGTGTGATCTGCTTGGATGCACTGGTCGATGGAGCAGCAGCACCGCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTCGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATG                                                                                                                                                                                                      ]
[+] EMBL BM578897             [          ccgGATAGAATGAAGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCG                                                                                                                                                                                                                                                                    ]
[+] EMBL BX621449             [                 GAATGAAGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGCCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTTGGCCGGCGAGAATGGGAAGCGATAATGAGCTAGATTAAATGCTCGTCTAAAGATTGTTCAGTGAANGGAGTAAAAAGTGTGCCTTTTGCGTGCGGGTAGTTCTCATCAA                                                          ]
[+] EMBL BX621480             [                             TAGTGCTTGCCATTGTGTTAAGTGTGATCTGCTTGGATGCACTGGTCGATGGAGCAGCAGCACCGCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTCGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTGGGCCGGCGAGAACGGGAAGCGATAATGAGCCAGATTAAATGCTCGTCTGGAGATTATTCAGTGAAGGGAGTAAAAAGTGTGCC TTTGCGTGCGGGTAGTTCTCATCAATGATTCAAAGTGCTTTGTTCTAAAAAGAANGCAATTTGTATGTCTCCTGTAGTTCCCA]
[+] EMBL BX628623             [                                            TGTTAAGTGTGATCTGCTTGGATGCACTGGTCGATGGAGCAGCAGCACCGCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTCGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTGGGCCGGCGAGAACGGGAAGCGATAATGAGCCAGATTAAATGCTCGTCTGGAGATTATTCAGTGAAGGGAGTAAAAAGTGTGCC TTTGCGTGCGGGTAGTTCTCATCAATGATTCAAAGTGCTTTGNTCTAAAAAGAANGCAATTTGTA                  ]
[+] EMBL BX623570             [                                                          TGCTTGGATGCACTGGTCGATGGAGCAGCAGCACCGCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTCGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTGGGCCGGCGAGAACGGGAAGCGATAATGAGCCAGATTAAATGCTCGTCTGGAGATTATTCAGTGAANGGAGTAAAAAGTGTGCC TTTGCGTGCGGGTAGTTCTCATCNATGATTCAAAGTGCTTT                                          ]
[+] EMBL BX627322             [                                                               GGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATG AACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGCCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTTGGCCGGCGAGAATGGGAAGCGATAATGAGCTAGATTAAATGCTCGTCTAGAGATTGTTCAGTGAAGGGAGTAAAAAGTGTGCC TTTGCGTGCGGGTAGTTCTCATCAATGATTCA                                                   ]


>consensus_9006#0 CCGCACCAGGTGTGATAGAATGAAGTTCTTAGTGTTTGCCATTGTGTTAAGTGTGATCTG CTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAA AATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGA CTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTT GGTGAAATGTTTCTTCGAGAAAACGGGCTTCATGAACAAGGACGGCCAGCTGCAGGAGGA AACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAA AAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTA CTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGA AGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGT TCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTGTGTGGAATTGCAAGTG TTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTGGGCCGGCGAGAAC GGGAAGCGATAATGAGCCAGATTAAATGCTCGTCTGGAGATTATTCAGTGAAGGGAGTAA AAAGTGTGCCTTTGCGTGCGGGTAGTTCTCATCAATGATTCAAAGTGCTTTGTTCTAAAA AGAANGCAATTTGTATGTCTCCTGTAGTTCCCA



consensusID : consensus_9006#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 712
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATGAACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGCCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTTGGCCGGCGAGAATGGGAAGCGATAATGAGCTAGATTAAATGCTCGTCTAGAGATTGTTCAGT]

[+] EMBL BM616681             [CCGCCCACGCGTCCGCCCACGCGTCCGGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGATCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTGCTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATGAACAAGGACGGCCAGCTGCAGGAGGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGCCAGTGCGTTGTGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTTGGCCGGCGAGAATGGGAAGCGATAATGAGCTAGATTAAATGCTCGTCTAGAGATTGTTCAGT]


>consensus_9006#1 CCGCCCACGCGTCCGCCCACGCGTCCGGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGAT CTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAG CAAAATTGCCAACGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCT GGACTCGCTGGCTGCCCTCTCGGCAAAGGAGCTGGACACGAATGGCAGCAAGATTAAGTG CTTGGTGAAATGTTTCTTTGAGAAAACGGGCTTCATGAACAAGGACGGCCAGCTGCAGGA GGAAACCATCACCGAGCAGCTGTCCAAGTTTATGCCCCGCGAGCGCATTGAATCGCTCGT CAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACAAAGTGACCGAGTG CTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCACCTACCAACCTACC GGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACATATGAGTGTGATC TGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGCCAGTGCGTTGTGTGGAATTGCAA GTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGACTTGGCCGGCGAG AATGGGAAGCGATAATGAGCTAGATTAAATGCTCGTCTAGAGATTGTTCAGT



consensusID : consensus_9006#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 329
fasta sequence
                              [NGGCCCTNGCAGAATCGNCACGAGGTATGTAGTTTGCCATTGTGTTAGTGCGACTCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGACTGGCTGCCCTCTCGGGCAAAGGAGCTGGACACGAATGGCCAGCAAGCATTAACGTGCTTGGTGAACATGTTTCTTTGAGAAAAACGGGCTTCATGAACAAGGAACGGCCANGCTGCACGAGGCAAACCATCACCGAGGCAGCTG]

[+] EMBL BX469786             [NGGCCCTNGCAGAATCGNCACGAGGTATGTAGTTTGCCATTGTGTTAGTGCGACTCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAATTGCCAACGGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGACTCGACTGGCTGCCCTCTCGGGCAAAGGAGCTGGACACGAATGGCCAGCAAGCATTAACGTGCTTGGTGAACATGTTTCTTTGAGAAAAACGGGCTTCATGAACAAGGAACGGCCANGCTGCACGAGGCAAACCATCACCGAGGCAGCTG]


>consensus_9006#2 NGGCCCTNGCAGAATCGNCACGAGGTATGTAGTTTGCCATTGTGTTAGTGCGACTCTGCT TGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGAGCAAAA TTGCCAACGGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAGCTGGAC TCGACTGGCTGCCCTCTCGGGCAAAGGAGCTGGACACGAATGGCCAGCAAGCATTAACGT GCTTGGTGAACATGTTTCTTTGAGAAAAACGGGCTTCATGAACAAGGAACGGCCANGCTG CACGAGGCAAACCATCACCGAGGCAGCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9006#0      CCGCAC-CAGGTGTGATAGAATGA--AGTTCTTAGTGTTTGCCATTGTGTTAAGTGTGA- 56
consensus_9006#1      CCGCCCACGCGTCCGCCCACGCGTCCGGTTCTTAGTGTTTGCCATTGTGTTAAGTGCGA- 59
consensus_9006#2      -NGGCCCTNGCAGAATCGNCACGA--GGTATGTAGT--TTGCCATTGTGTTA-GTGCGAC 54
                        *  *                *    **   ****  ************** *** ** 

consensus_9006#0      TCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGA 116
consensus_9006#1      TCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGA 119
consensus_9006#2      TCTGCTTGGATGCACTCGTCGATGGAGCAGCAGCACCTCCACCGGATCTGGAAGATGTGA 114
                      ************************************************************

consensus_9006#0      GCAAAATTGCCAACGG-CGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAG 175
consensus_9006#1      GCAAAATTGCCAACGG-CGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAG 178
consensus_9006#2      GCAAAATTGCCAACGGGCGAAGCATTTGCGCTGGAATGCTTGATCGAGAGTGGACTCAAG 174
                      **************** *******************************************

consensus_9006#0      CTGGACTCG-CTGGCTGCCCTCTCGG-CAAAGGAGCTGGACACGAATGGC-AGCAAG-AT 231
consensus_9006#1      CTGGACTCG-CTGGCTGCCCTCTCGG-CAAAGGAGCTGGACACGAATGGC-AGCAAG-AT 234
consensus_9006#2      CTGGACTCGACTGGCTGCCCTCTCGGGCAAAGGAGCTGGACACGAATGGCCAGCAAGCAT 234
                      ********* **************** *********************** ****** **

consensus_9006#0      TAA-GTGCTTGGTGAA-ATGTTTCTTCGAGAAAA-CGGGCTTCATGAACAAGGA-CGGCC 287
consensus_9006#1      TAA-GTGCTTGGTGAA-ATGTTTCTTTGAGAAAA-CGGGCTTCATGAACAAGGA-CGGCC 290
consensus_9006#2      TAACGTGCTTGGTGAACATGTTTCTTTGAGAAAAACGGGCTTCATGAACAAGGAACGGCC 294
                      *** ************ ********* ******* ******************* *****

consensus_9006#0      AG-CTGCAGGAGG-AAACCATCACCGAG-CAGCTGTCCAAGTTTATGCCCCGCGAGCGCA 344
consensus_9006#1      AG-CTGCAGGAGG-AAACCATCACCGAG-CAGCTGTCCAAGTTTATGCCCCGCGAGCGCA 347
consensus_9006#2      ANGCTGCACGAGGCAAACCATCACCGAGGCAGCTG------------------------- 329
                      *  ***** **** ************** ******                         

consensus_9006#0      TTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACA 404
consensus_9006#1      TTGAATCGCTCGTCAAAAACTGCAACTTCCAGGAGGCGGACGCTTGCGAGACGGCATACA 407
consensus_9006#2      ------------------------------------------------------------
                                                                                  

consensus_9006#0      AAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGACTGTTTTAAGTTCGTGCGTGCCCAC 464
consensus_9006#1      AAGTGACCGAGTGCTACTTCCAGAACAAAGCCGGGCTGTTTTAAGTTCGTGCGTGCCCAC 467
consensus_9006#2      ------------------------------------------------------------
                                                                                  

consensus_9006#0      CTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACA 524
consensus_9006#1      CTACCAACCTACCGGAAGCTGATGTGATAGCGGCCACGTGTGGCTCCAGCAAGTGCAACA 527
consensus_9006#2      ------------------------------------------------------------
                                                                                  

consensus_9006#0      TATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGTCAGTGCGTTG 584
consensus_9006#1      TATGAGTGTGATCTGTTCAATAAATTCCCGCCACCAGCTGTCAGAACGGCCAGTGCGTTG 587
consensus_9006#2      ------------------------------------------------------------
                                                                                  

consensus_9006#0      TGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGA 644
consensus_9006#1      TGTGGAATTGCAAGTGTTTACGTGTTTGAATGTCGCTTTGTACCGGTGAGCTGAACAAGA 647
consensus_9006#2      ------------------------------------------------------------
                                                                                  

consensus_9006#0      CTGGGCCGGCGAGAACGGGAAGCGATAATGAGCCAGATTAAATGCTCGTCTGGAGATTAT 704
consensus_9006#1      CTTGGCCGGCGAGAATGGGAAGCGATAATGAGCTAGATTAAATGCTCGTCTAGAGATTGT 707
consensus_9006#2      ------------------------------------------------------------
                                                                                  

consensus_9006#0      TCAGTGAAGGGAGTAAAAAGTGTGCCTTTGCGTGCGGGTAGTTCTCATCAATGATTCAAA 764
consensus_9006#1      TCAGT------------------------------------------------------- 712
consensus_9006#2      ------------------------------------------------------------
                                                                                  

consensus_9006#0      GTGCTTTGTTCTAAAAAGAANGCAATTTGTATGTCTCCTGTAGTTCCCA 813
consensus_9006#1      -------------------------------------------------
consensus_9006#2      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)