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Anopheles gambiae
cluster # 9013 cluster # 9013       Sequences # 13       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9013#0 length = 830 sequences # 9  
consensus_9013#1 length = 607 sequences # 1  
consensus_9013#2 length = 591 sequences # 1  
consensus_9013#3 length = 532 sequences # 1  
consensus_9013#4 length = 243 sequences # 1  

consensusID : consensus_9013#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 830
fasta sequence
                              [CCGCGGACGCGTGGGCGGACCCGTCTCTTGAACGTGTACGGTGTGTGTCCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT-GGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCC-GGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGCTAAGGCTTAAAAAGGTAAAGTGGCGCAGTGCCAGAGAGCAAACGATTATTATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAAAAAAAGTA]

[+] EMBL BM585010             [CCGCGGACGCGTGGGCGGACGCGTGGGTTGAACGTGTACGGTGTGTGTCCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT GGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCCGGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGGGGCACCGATCTGGGCAAG                                                                                                                                ]
[+] EMBL BM603483             [                   CCGGTCTCTTGAACGTGTACGGTGTGTGTCCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCC GGgat                                                                                                                                                                                                              ]
[+] EMBL BM647992             [                    CCG CTCTTGAACGTGTACGGTGTGTGTCCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAAGCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTGACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCGATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTATTCTTCGGCAAATCCGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT GGGTGTGGTGCCGTTAGAGCAGTCGAAGCATCCCC GGATCTACGCGTGGATCGATCGGCTGAAGCAGTTGC                                                                                                                                                                               ]
[+] EMBL BM628602             [                                      ccGTGTGTGTCCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAAGCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTGACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCGATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTATTCTTCGGCAAATCCGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCG                                                                                                                                                                                                                                                                ]
[+] EMBL BX616348             [                                                                      CGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT GGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCC GGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTT                                                                                                                              ]
[+] EMBL BX605159             [                                                                      CGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGAC AAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT GGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCC GGATCT                                                                                                                                                                                                             ]
[+] EMBL BX612389             [                                                                      CGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT GGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCC GGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAAT                                                                                                     ]
[+] EMBL AF316636             [                                                                                    CTTGTACTGTACACCCTGCACCTTAGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCAATTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT GGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCC GGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGC                                                                                                   ]
[+] EMBL BX613016             [                                                                                                            AGCCCACCGTGCCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTAT GGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCC GGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGCTAAGGCTTAAAAAGGTAAAGTGGCGCAGTGCCAGAGAGCAAACGATTATTATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAAAAAAAGTA]


>consensus_9013#0 CCGCGGACGCGTGGGCGGACCCGTCTCTTGAACGTGTACGGTGTGTGTCCATCCAGTTTT TAGTTCGCTGCGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGC CGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAAT CTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATC CCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTG GTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGT GTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTC GAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAG AAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATG ACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTGCCGTTG GAGCAGTCGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTAC TACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAG GAGGAGAATGCTAAGGCTTAAAAAGGTAAAGTGGCGCAGTGCCAGAGAGCAAACGATTAT TATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAAAAAAAGTA



consensusID : consensus_9013#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 607
fasta sequence
                              [GATCCCCGAGGNTCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAACCTGTACTGTACACCCTGGCAACCCCTTTAAGCCCCCAACCCCGGTGCCGTGCCCGTGGAGCTGACGGGCCCAAAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCCGGATCTAC]

[+] EMBL AL932160             [GATCCCCGAGGNTCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAACCTGTACTGTACACCCTGGCAACCCCTTTAAGCCCCCAACCCCGGTGCCGTGCCCGTGGAGCTGACGGGCCCAAAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCCGGATCTAC]


>consensus_9013#1 GATCCCCGAGGNTCATCCAGTTTTTAGTTCGCTGCGAAAATGTCCAACCTGTACTGTACA CCCTGGCAACCCCTTTAAGCCCCCAACCCCGGTGCCGTGCCCGTGGAGCTGACGGGCCCA AAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTT GAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGG TACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGA TGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTT CGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGG CAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGA GGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTG CATTTCCACGATCTCGAGCATTATGGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCCG GATCTAC



consensusID : consensus_9013#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 591
fasta sequence
                              [CCGCCCACGCGTCCGGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGCTAAGGCTTAAAA]

[+] EMBL BM597422             [CCGCCCACGCGTCCGGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGCTAAGGCTTAAAA]


>consensus_9013#2 CCGCCCACGCGTCCGGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATT TGTGAAGCTAAACCCGCAACATACGATCCCGGTGCTGGATGACAACGGTACGATCATCAC CGAGAGCCACGCAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTA TCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGT ACTGTTCGCCCGGATGAGATTCATTTTCGAACGTATCCTGTTCTTCGGCAAATCGGACAT CCCCGAGGATCGCGTTGAGTACGTGCAGAAATCGTACGAGCTGCTGGAGGACACACTGGT GGACGACTTTGTCGCCGGACCGACCATGACGATCGCCGACTTTAGCTGCATTTCCACGAT CTCGAGCATTATGGGTGTGGTGCCGTTGGAGCAGTCGAAGCATCCCCGGATCTACGCGTG GATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGA TCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGCTAAGGCTTAAAA



consensusID : consensus_9013#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 532
fasta sequence
                              [GAATCGCCCCGAGGGTNATCCAGGTTNTTAGTTCGCTGGCGAAAATGTCCAACCTTGTACTGTACACCCTGACACCTTAGCCCACCGTGACCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAAAATACGATCCCGGATGACTGGATGACAATCGGTACGAGTCATCACCGAGAGCCACGCAAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTNTACGAACGTATCCTGTACTTCGGCAAATCGGACATCCCCGATGATCGCGTTGAGTACGATGCAGAANAGTCGTACGAGCTGCTGGAGGACACACTGGTGGACGACGTTTGTCGCCGGACCTGACCATGACGATCGCCG]

[+] EMBL AL932177             [GAATCGCCCCGAGGGTNATCCAGGTTNTTAGTTCGCTGGCGAAAATGTCCAACCTTGTACTGTACACCCTGACACCTTAGCCCACCGTGACCGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAAAATACGATCCCGGATGACTGGATGACAATCGGTACGAGTCATCACCGAGAGCCACGCAAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTNTACGAACGTATCCTGTACTTCGGCAAATCGGACATCCCCGATGATCGCGTTGAGTACGATGCAGAANAGTCGTACGAGCTGCTGGAGGACACACTGGTGGACGACGTTTGTCGCCGGACCTGACCATGACGATCGCCG]


>consensus_9013#3 GAATCGCCCCGAGGGTNATCCAGGTTNTTAGTTCGCTGGCGAAAATGTCCAACCTTGTAC TGTACACCCTGACACCTTAGCCCACCGTGACCGTGCCGTGGAGCTGACGGCCAAAGCATT GGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTAACGGGTGACCATTTGAAGCCGGA ATTTGTGAAGCTAAACCCGCAAAATACGATCCCGGATGACTGGATGACAATCGGTACGAG TCATCACCGAGAGCCACGCAAATCATGATCTATCTGGTGACGAAGTATGGCAAAGATGAT AGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGTGTAAATTCGGCCCTGCACTTCGAG TCCGGCGTACTGTTCGCCCGGATGAGATTCATTNTACGAACGTATCCTGTACTTCGGCAA ATCGGACATCCCCGATGATCGCGTTGAGTACGATGCAGAANAGTCGTACGAGCTGCTGGA GGACACACTGGTGGACGACGTTTGTCGCCGGACCTGACCATGACGATCGCCG



consensusID : consensus_9013#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 243
fasta sequence
                              [CCGCCCACGCGTCCGGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGCTAAGGCTTAAAAAGGTAAAGTGGCGCAGTGCCAGAGAGCAAACGATTATTATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAAAAAAAGTAAGAAGC]

[+] EMBL BM649870             [CCGCCCACGCGTCCGGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCCAAAAAGGAGGAGAATGCTAAGGCTTAAAAAGGTAAAGTGGCGCAGTGCCAGAGAGCAAACGATTATTATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAAAAAAAGTAAGAAGC]


>consensus_9013#4 CCGCCCACGCGTCCGGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCT GCCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGC CAAAAAGGAGGAGAATGCTAAGGCTTAAAAAGGTAAAGTGGCGCAGTGCCAGAGAGCAAA CGATTATTATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAAAAAAAGTAAGA AGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9013#0      CCGCGGACGCGTGGGCGGACCCGTCTCTTGAACGTGTACGGTGTGTGTCCATCCAGTTTT 60
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      TAGTTCGCTGCGAAAATGTCCAACCTTGTACTGTACACCCTGCACCTTAGCCCACCGTGC 120
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      CGTGCCGTGGAGCTGACGGCCAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAAT 180
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      CTGCTAACGGGTGACCATTTGAAGCCGGAATTTGTGAAGCTAAACCCGCAACATACGATC 240
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      CCGGTGCTGGATGACAACGGTACGATCATCACCGAGAGCCACGCAATCATGATCTATCTG 300
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      GTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGT 360
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      GTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTTC 420
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      GAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACGTGCAG 480
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ---------GATC--CCCGAGGNTCATCCAG-TTTTTAGTTCGCTG-CGAAAATGTCCAA 47
consensus_9013#3      --------GAATCGCCCCGAGGGTNATCCAGGTTNTTAGTTCGCTGGCGAAAATGTCCAA 52
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      AAATCGTACGAGCTGCTGGAGGACACACTGGTGGACGACTTTGTCGCCGGACCGACCATG 540
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      CCT-GTACTGTACACCCTGGCAACCCCTTTAAGCCCCCAACCCCGGTGCCGTGCCCGTGG 106
consensus_9013#3      CCTTGTACTGTACACCCTGACA---CCTT--AGCCCAC-----CGTGACCGTGCC-GTGG 101
consensus_9013#2      ------------------------------------------------------------
                                                                                  

consensus_9013#0      ACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTGCCGTTG 600
consensus_9013#4      ------------------------------------------------------CCGCCC 6
consensus_9013#1      AGCTGACGGGCCCAAAAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTA 166
consensus_9013#3      AGCTGACGGCC----AAAGCATTGGGCTTGGAGCTGGAGCAGAAGACCATTAATCTGCTA 157
consensus_9013#2      --------------------------CCGCCCACGCGTCCGGAAGACCATTAATCTGCTA 34
                                                                            * *   

consensus_9013#0      GAGCAGTCG-AAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTA 659
consensus_9013#4      ACGCGTCCGGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTGCCCTA 66
consensus_9013#1      ACGGGTGACCATTTGAAGCCGGAATT-TGTGAAGCTAAACCCGCAACATACGATCCCGGT 225
consensus_9013#3      ACGGGTGACCATTTGAAGCCGGAATT-TGTGAAGCTAAACCCGCAAAATACGATCCCGGA 216
consensus_9013#2      ACGGGTGACCATTTGAAGCCGGAATT-TGTGAAGCTAAACCCGCAACATACGATCCCGGT 93
                        *       *       *****  *  * *  * *  * * **   *   * * **   

consensus_9013#0      CTACGAGGAAGCGAACGGTGGCG-GTGGCACCGA--TCTGGGCAA--------GTTTGTG 708
consensus_9013#4      CTACGAGGAAGCGAACGGTGGCG-GTGGCACCGA--TCTGGGCAA--------GTTTGTG 115
consensus_9013#1      --GCTGGATGACAA-CGGTACGA-TCATCACCGAGAGCCACGCAA-TCATGATCTATCTG 280
consensus_9013#3      TGACTGGATGACAATCGGTACGAGTCATCACCGAGAGCCACGCAAATCATGATCTATCTG 276
consensus_9013#2      --GCTGGATGACAA-CGGTACGA-TCATCACCGAGAGCCACGCAA-TCATGATCTATCTG 148
                         *  *    * * ****         ******   *   ****         * * **

consensus_9013#0      CTAGCCAAAAAGGAGGAGAATGCTAAGGCTTA---AAAAGGTAAAGTGGCGCAGTGCCAG 765
consensus_9013#4      CTAGCCAAAAAGGAGGAGAATGCTAAGGCTTA---AAAAGGTAAAGTGGCGCAGTGCCAG 172
consensus_9013#1      GTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGT 340
consensus_9013#3      GTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGT 336
consensus_9013#2      GTGACGAAGTATGGCAAAGATGATAGCCTCTATCCGAAAGACCCCGTCAAGCAGGCCCGT 208
                       *  * **  * *   *  *** **     **    ****     **   ****  **  

consensus_9013#0      AGAG---CAAACGATTATTATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAA 822
consensus_9013#4      AGAG---CAAACGATTATTATGAGTTAAATTTGGAAGCATTTGGAAAAAAATAAATAAAA 229
consensus_9013#1      GTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTT- 399
consensus_9013#3      GTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTNTA 396
consensus_9013#2      GTAAATTCGGCCCTGCACTTCGAGTCCGGCGTACTGTTCGCCCGGATGAGATTCATTTT- 267
                        *    *   *    * *  ****      *           * *  * **  **    

consensus_9013#0      AAAAAGTA---------------------------------------------------- 830
consensus_9013#4      AAAAAGTAAGAAGC---------------------------------------------- 243
consensus_9013#1      CGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACG-TGC 458
consensus_9013#3      CGAACGTATCCTGTACTTCGGCAAATCGGACATCCCCGATGATCGCGTTGAGTACGATGC 456
consensus_9013#2      CGAACGTATCCTGTTCTTCGGCAAATCGGACATCCCCGAGGATCGCGTTGAGTACG-TGC 326
                        ** ***                                                    

consensus_9013#0      ------------------------------------------------------------
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      AGAAA--TCGTACGAGCTGCTGGAGGACACACTGGTGGACGAC-TTTGTCGCCGGACC-G 514
consensus_9013#3      AGAANAGTCGTACGAGCTGCTGGAGGACACACTGGTGGACGACGTTTGTCGCCGGACCTG 516
consensus_9013#2      AGAAA--TCGTACGAGCTGCTGGAGGACACACTGGTGGACGAC-TTTGTCGCCGGACC-G 382
                                                                                  

consensus_9013#0      ------------------------------------------------------------
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTG 574
consensus_9013#3      ACCATGACGATCGCCG-------------------------------------------- 532
consensus_9013#2      ACCATGACGATCGCCGACTTTAGCTGCATTTCCACGATCTCGAGCATTATGGGTGTGGTG 442
                                                                                  

consensus_9013#0      ------------------------------------------------------------
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      CCGTTGGAGCAGTCGAAGCATCCCCGGATCTAC--------------------------- 607
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      CCGTTGGAGCAGTCGAAGCATCCCCGGATCTACGCGTGGATCGATCGGCTGAAGCAGCTG 502
                                                                                  

consensus_9013#0      ------------------------------------------------------------
consensus_9013#4      ------------------------------------------------------------
consensus_9013#1      ------------------------------------------------------------
consensus_9013#3      ------------------------------------------------------------
consensus_9013#2      CCCTACTACGAGGAAGCGAACGGTGGCGGTGGCACCGATCTGGGCAAGTTTGTGCTAGCC 562
                                                                                  

consensus_9013#0      -----------------------------
consensus_9013#4      -----------------------------
consensus_9013#1      -----------------------------
consensus_9013#3      -----------------------------
consensus_9013#2      AAAAAGGAGGAGAATGCTAAGGCTTAAAA 591
                                                   




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)