These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9015#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1201 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGCGACATCGAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCAGCTAAAAATGGCGGAAAGCGGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTGGCAAATGTCGGAATGCTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGTTGCAGGGTACGCGCAACAGTCAGGAGGTTGCGATTCCACCTGTCGTGGAGAAGCTAATGCAAGCGCTGGACCGGTTGGAGCAGCTGGCAATCGAAACGCCCCCGATCGATCAGCCGGCCCGGTTCGGTAATGTTGCGTTCAAAAGCTGGTTCC-A-AAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTTATGTTTCTGATGTGCTTGTTCAAGACCGGGGCTGTTGAGCGGAAAGATGAGGTTGCTGTCGGGTTGAAGTTGTTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTAACGTACCGAATGGAACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGTTCATCTGGGGCAGTGCGCAGCTGGCCGTAAACAGTCCGATCGAACCGGCCCAGTTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATCGATTACATACAGCAGGTGAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGGAGCATCAGTGCCGTACCGCAGTGGTCAAAGATCTGTACCGGGCTGATTAAGATGTACCAGAAGGAGGTGCTGTCGAAGTTTCCCGTCATTCAGCACGTTTACTTCGGGTCTATACTTACACTGAAAACGGTCAAGCCGGGCACAATGTTGCCTAGTCCGCGGCTGGGAATGCTTCCGCGACAGCAGCAGCAGCGTCCGGCCCCGCCTGCAGTACCACCGCCACCCGCGTTTCCCGGTGGTGATGGAATGTGATAAAACTGTGTATTACACGCTATTAGTTTGTGATTGTTCAAAGAATAAAATGTTGAAATTATAAAAAAA] [+] EMBL BM615973 [CCGCCCACGCGTCCGCCCACGCGTCCGGCGACATCGAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCGGCTAAAAATGGCGGAAAGCGGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTGGCAAATGTCGGAATGCTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGTTGCAGGGTACGCGCAACAGTCAGGAGGTTGCGATTCCACCTGTCGTGGAGAAGCTAATGCAAGCGCTGGACCGGTTGGAGCAGCTGGCAATCGAAACGCCCCCGATCGATCAGCCGGCCCGGTTCGGTAATGTTGCGTTCAAAAGCTGGTTCC A AAGATGCAGTCG ] [+] EMBL BM589423 [ CCGCCCACGCGTCCG GAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCAGCTAAAAATGGCAGAAAGCTGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTGGCAAATGTCGGAATGTTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGGTGCAGGGTACGCGCAATAGTCAGGAGGTTGCGATTCCACCCGTCGTGGAGAAGCTAATGCAAGCGCTGGACCGGCTGGAGCAGCTGGCAATCGAAACGCCACCGATCGATCAGCCGGCCCGGTTCGGTAATGTTGCGTTCAAAAGCTGGTTCCAA AAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGACGCACTGCCGGACACGCTGAAGTATGCGGCGAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTCATGTTTCTGATGTGTTTGTTCAAGACCGGGGCTGTAGAGCGGAAGGATGAGGTTGCTGTCGGGTTGAAGCTGTTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTAACGTACCGAATGGAACCGGCCGGCAGCCACGGTGTGTG ] [+] EMBL BM585514 [ CCGGCGCAATCGAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCAGCTAAAAATGGCGGAAAGCGGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTGGCAAATGTCGGAATGCTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGTTGCAGGGTACGCGCAACAGTCAGGAGGTTGCGATTCCACCTGTCGTGGAGAAGCTAATGCAAGCGCTGGACCGGTTGGAGCAGCTGGCAATCGAAACGCCCCCGATCGATCAGCCGGCCCGGTTCGGTAATGTTGCGTTCAAAAGCTGGTTCC AGAAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTTATGTTTCTGATGTGCTTGTTCAAGACCGGGGCTGTTGAGCGGAAAGATGAGGTTGCTGTCGGGTTGAAGTTGTTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTAACGTACCGAATGGAACCGGCCGGCAGCCACGGTGTGTGGAGTTT ] [+] EMBL BX605558 [ GAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCAGCTAAAAATGGCGGAAAGCGGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTGGCAAATGTCGGAATGCTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGTTGCAGGGTACGCGCAACAGTCAGGAGGTTGCGATTCCACCTGTCGTGGAGAAGCTAATGCAAGCGCTGGACCGGTTGGAGCAGCTGGCAATCGAAACGCCCCCGATCGATCAGCCGGCCCGGTTCGGTAATGTTGCGTTCAAAAGCTGGTTCC AGAAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTTATGTTTCTGATGTGCTTGTTCAAGACCGGGGCTGTTGAGCGGAAAGATGAGGTTGCTGTCGGGTTGAAGTTGTTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTA ] [+] EMBL BX623414 [ ATGGATATGGAGCTGTGGCAAATGTCGGAATGCTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGTTGCAGGGTACGCGCAACAGTCAGGAGGTTGCGATTCCACCTGTCGTGGAGAAGCTAATGCAAGCGCTGGACCGGTTGGAGCAGCTGGCAATCGAAACGCCCCCGATCGATCAGCCGGCCCGGTTCGGTAATGTTGCGTTCAAAAGCTGGTTCCAA AAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCCTTCGTTATGTTTCTGATGTGTTTGTTCAAGACCGGGGCTGTTGAGCGGAAAGATGAGGTTGCTGTCGGGTTGAAGCTATTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTAACGTACCGAATGGAACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGTTCATCTGGGGCAGTGCGCAGCTGGCCGTAAACAGTCCGATCGAACCGGCACAGTTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATCGATTACATACAGCAGGTTAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGG ] [-] EMBL CNS099CY [ AATCGAAACGCCACCGATCGATCAGCCGGCCCGGTTCGGTATTGTTGCGTTCAAAAGTTGGTTCCAA AAGATGCAATCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGGGCTGGCGTTCGTCATGTTTCTGATGTGTTTGTTCAAGACCGGGGCTGTAGAGCGGAAGGATGAGGTTGCTGTCGGGTTGAAGCTGTTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTAACGTACCGAATGGAACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGTTCATCTGGGGCAGTGCGCAGCTGGCCGTAAACAGTCCGATCGAACCGGCCCAGTTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATCGATTACATACAGCAGGTGAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGGAGCATCAGTGCCGTACCGCAGTGGTCAAAGATCTGTACCGGGCTGATTAAGATGTACCAGAAGGAGGTGCTGTCGAAGTTTCCCGTCATTCAGCACGTTTACTTCGGGTCTATACTTACACTGAAAACGGTCAAGCCGGGCACAATGTTGCCTAGTCCGCGGCTGGGAATGCTTCCGCGACAGCAGCAGCAGCGTCCGGCCCCGCCTGCAGTACCACCGCCACCCGCGTTTCCCGGTGGTGATGGAATGTGATAAAACTGTGTATTACACGCTATTAGTTTGTGATTGTTCAAAGAATAAAATGTTGAAATTATAAAAAAA] [+] EMBL BX617571 [ GGTTCGGTAATGTTGCGTTCAAAAGCTGGTTCC AGAAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTTATGTTTCTGATGTGCTTGTTCAAGACCGGGGCTGTTGAGCGGAAAGATGAGGTTGCTGTCGGGTTGAAGTTGTTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTAACGTACCGAATGGAACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGTTTATCTGGGGCAGTGCGCAGCTGGCCGTAAACAGTCCGATCGAACCGGCCCAGTTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATCGATTACATACAGCAGGTGAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGGAGCATCAGTGCCGTACCGCAGTGGTCAAAGATCTGTACCGGGCTGATTAAGATGTACCAGAAGGAGGTGCTGTCGAAGTTTCCCGTCATTCAGCACGTTT ] [+] EMBL BM578658 [ ccgGTTGCGTTCAAAAGCTGGTTCC AGAAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTTATGTTTCTGATGTGCTTGTTCAAGACCGGGGCTGTTGAGCGGAAAGATGAGGTTGCTGTCGGGTTGAAGTTGTTCCAGAAGTACATCATCCTGGCAAGAAAGCTGCAGGTAACGTACCGAATGGAACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGTTTATCTGGGGCAGTGCGCAGCTGGCCGTAAACAGTCCGATCGAACCGGCCCAGTTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATCGATTACATACAGCAGGTGAAGACGG ] consensusID : consensus_9015#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1116 fasta sequence [CAGATTGCCCCAGGCTTAATCGAAACGCGTAGTTTTGCACGAAAGTTACAATAAAAGCAGCTAAAAATGGCGGAAAGCGGTGCGGATGTGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATAGNGAGCTGTGTGCAAATGTCTGTGAATGCTATTACGATCTTGATCGTGCTATCATCAGCCAGCATGTCGGTAGCTGTATGCCAGGGTACTGCGCAACCAGTCCAGGGCAGTGTATGCGATATCCCACCCTGTCGTTGGCAAGAAGCTANAATTGCAAAGCGCTGGGACCCTGGTTGGAGCCAGCTTGGGANATCCTGAAACACTGGCCCCCCCGGAATTCTGAATCCCAAGGCTGGGANCCCGGGTATCAGNGGTCAAATAGGTAAGCCGTATCACCAACNACAGNCCTTGGGTTATACCCAGAACAGAATNGCCAACGATCCTNGGNGAAAGCACATTTGCACGCTTTGGTTAAAGCAGAATGGCCNACTGCGCCGGANAAAACGCCTTAGAAAAAGGTCGGACTATGACGCGGAGGCCCCAAAGAGGGAAAAGCACTTCGNTNACGCCCNTTTAGTTCANCCTACTCTTCGCTTACANCGANATACGGGNATCANCCGGNAGGGGAAATACCCCCGGAANCGCCGACCATCTATCGANATAAAAACACGNGNGGACAACACAAGCAGGAGGCCCATTTNGCAAGCNTATTGGANCGNTTACCACGGCANACACTAAGNNTAAACCTATGGAAGTCGTAAGGNACNNCTTGGAGATACCAGAAGAAAACCCGNGGTGGGTNANACACTAGGCATNATGAAAAAGCCCCGGGACAANAAGCAACATTCAACGAGAGTAAGNGCGCATTGGATCGAGGNGCNATTCATGTACAGCGATNTGGGATACCACAACGGAAAAAAGCTAACAAAATATCAAAANCCCAATGTGATCACAATGANACAAAAGACCACGTGGCACAGGCATGTATACACAGTAAANCACAGAANAAAANTGGAAAACACGTGGGTCCCGGAAGCAAGCCAACCAGGGAAGATTAGATGCACAGCGAAATAAGGGGAAATCGATAA] [+] EMBL AL693707 [CAGATTGCCCCAGGCTTAATCGAAACGCGTAGTTTTGCACGAAAGTTACAATAAAAGCAGCTAAAAATGGCGGAAAGCGGTGCGGATGTGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATAGNGAGCTGTGTGCAAATGTCTGTGAATGCTATTACGATCTTGATCGTGCTATCATCAGCCAGCATGTCGGTAGCTGTATGCCAGGGTACTGCGCAACCAGTCCAGGGCAGTGTATGCGATATCCCACCCTGTCGTTGGCAAGAAGCTANAATTGCAAAGCGCTGGGACCCTGGTTGGAGCCAGCTTGGGANATCCTGAAACACTGGCCCCCCCGGAATTCTGAATCCCAAGGCTGGGANCCCGGGTATCAGNGGTCAAATAGGTAAGCCGTATCACCAACNACAGNCCTTGGGTTATACCCAGAACAGAATNGCCAACGATCCTNGGNGAAAGCACATTTGCACGCTTTGGTTAAAGCAGAATGGCCNACTGCGCCGGANAAAACGCCTTAGAAAAAGGTCGGACTATGACGCGGAGGCCCCAAAGAGGGAAAAGCACTTCGNTNACGCCCNTTTAGTTCANCCTACTCTTCGCTTACANCGANATACGGGNATCANCCGGNAGGGGAAATACCCCCGGAANCGCCGACCATCTATCGANATAAAAACACGNGNGGACAACACAAGCAGGAGGCCCATTTNGCAAGCNTATTGGANCGNTTACCACGGCANACACTAAGNNTAAACCTATGGAAGTCGTAAGGNACNNCTTGGAGATACCAGAAGAAAACCCGNGGTGGGTNANACACTAGGCATNATGAAAAAGCCCCGGGACAANAAGCAACATTCAACGAGAGTAAGNGCGCATTGGATCGAGGNGCNATTCATGTACAGCGATNTGGGATACCACAACGGAAAAAAGCTAACAAAATATCAAAANCCCAATGTGATCACAATGANACAAAAGACCACGTGGCACAGGCATGTATACACAGTAAANCACAGAANAAAANTGGAAAACACGTGGGTCCCGGAAGCAAGCCAACCAGGGAAGATTAGATGCACAGCGAAATAAGGGGAAATCGATAA] consensusID : consensus_9015#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 968 fasta sequence [ATTGCCCGAGGTTNGCTCGCACGAAAAGCAAAACAAAAACATAAATCTTCCACTCCGAGCGCCATCGAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCAGCTAAAAATGGCAGAAAGCTGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTG-GCAAATGTCGGAATGTTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGGTGCAGGGTACGC-GCAATAGTCAGGAGG-TTGCGATTCCACCCGTCGTGGAGAAGCTAATGCAAGCGCTGGACC-GGCTGGAGCAGCTGGCAATCGAAACGCCACCGATCGATCAGCCGGCCCGGTTCGGTAATG-TTGCGTTCAAAAGCTGGTTCCAAAAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGACGCACTGCCGGACACGCTGAAGGATGCGGCGAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTCATGTTTCTGATGTGTTTGTTCAAGACCGGGGCTGTAGAGCGGAA-GG-ATGAGG-TTGCTGTCGGG-TTGAAGCTGTTCCAGAAGTACATCATCCTGGCAAGAA-AGCTGCAGGTAACGTACCGAATGG-AACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGTTCATCTGGGGCAGTGCGCACTGGCCCGTAAACAGTCCGATCGAACCGGCCCAGTTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATCGATTACATACAGCAGGTGAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGGAGCATCAGTGCCGTACCGCAGTGGTCAAAGATCTGTACCGGGCTGATTAAGATGTA] [+] EMBL AL931638 [ATTGCCCGAGGTTNGCTCGCACGAAAAGCAAAACAAAAACATAAATCTTCCACTCCGAGCGCCATCGAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCAGCTAAAAATGGCAGAAAGCTGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTGNGCAAATGTCGGAATGTTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGGTGCAGGGTACGCTGCAATAGTCAGGAGGTTTGCGATTCCACCCGTCGTGGAGAAGCTAATGCAAGCGCTGGACCTGGCTGGAGCAGCTGGCAATCGAAACGCCACCGATCGATCAGCCGGCCCGGTTCGGTAATGTTTGCGTTCAAAAGCTGGTTCCAAAAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGACGCACTGCCGGACACGCTGAAGGATGCGGCGAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTCATG TTCTGATGTG TTGTTCAAGACCGGGGCTGTAGAGCGGAACGGCATGAGGCTTGCTGTCGGGCTTGANGCTGTTCCAGAAGTACATCATCCTGGCAAGAANAGCTGCAGGTAA ] [+] EMBL CNS099CX [ tggaAAAAACGCCAATCTTCCACTCCGAGCGCCATCGAAACGCGTA TTTGCAGAAAGTTTACGATAAGAGCAGCTAAAAATGGCAGAAAGCGGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTG GCAAATGTCGGAATGTTATTACGATCTGATCGGCTTCATTAGCAGCATGTCGGTAGCGTTGCAGGGTACGC GCAACAGTCAGGAGG TGGCGATTCCACCCGTCGTGGAGAAGCTAATGCAAGCGCTGGACC GGCTGGAGCAGCTGGCAATCGAAACGCCACCGATCGATCAGCCGGCCCGGTTCGGTAATG TTGCGTTCAAAAGTTGGTTCCAAAAGATGCAATCGGAAAGCATGCAGCTTGTTAGCGATGCACTGCCGGACACGCTGAAGGATGCGGCCAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTCATGTTTCTGATGTGTTTGTTCAAGACCGGGGCTGTAGAGCGGAA GG ATGAGG TTGCTGTCGGG TTGAAGCTGTTCCAGAAGTACATCATCCTGGCAAGAA AGCTGCAGGTAACGTACCGAATGG AACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGTTCATCTGGGGCAGTGCGCACTGGCCCGTAAACAGTCCGATCGAACCGGCCCAGTTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATCGATTACATACAGCAGGTGAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGGAGCATCAGTGCCGTACCGCAGTGGTCAAAGATCTGTACCGGGCTGATTAAGATGTA] [+] EMBL BM590393 [ ccgACTCCGAGCGCCATCGAAACGCGTAGTTTTGCAGAAAGTTTACAATAAAAGCAGCTAAAAATGGCAGAAAGCTGTGCGGATGGAGAGCCGAAGCGGGAGTTTGTGGTGCCGGAAAAGCTGATCAAATCACCGATGGATATGGAGCTGTG GCAAATGTCGGAATGTTATTACGATCTGATCGGCTTCATCAGCAGCATGTCGGTAGCGGTGCAGGGTACGC GCAATAGTCAGGAGG TTGCGATTCCACCCGTCGTGGAGAAGCTAATGCAAGCGCTGGACC GGCTGGAGCAGCTGGCAATCGAAACGCCACCGATCGATCAGCCGGCCCGGTTCGGTAATG TTGCGTTCAAAAGCTGGTTCCAAAAGATGCAGTCGGAAAGCATGCAGCTTGTTAGCGACGCACTGCCGGACACGCTGAAGGATGCGGCGAAGGAGCTGTGCGTGTACTTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCGTTCGTCATGTTTCTGATGTGTTTGTTCAAGACCGGGGCTGTAGAGCGGAA GG ATGAGG TTGCTGTCGGG TTGAAGCTGTTCCAGAAGTACATCATCCTGGCAAGAA AGCTGCAGGTAACGTACCGAATGGAAACCGGCCGGCAGCCACGGTGTGTGGAGTTTGGACGACTTTCAGTTCGTGCCGT ] consensusID : consensus_9015#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 165 fasta sequence [GGCCAAGAATTCGCCCCCGAGGTGTCTNCATCGAAACGCGTAGTTTTGCAGAAAGTTTACAAGTAAAAGCAGCTAAAAAATGGCGGAATAGCGGTGCGGATGTGAGAGCCGAAGCGGGAGTTTGTGGTGCCNGGTAAAAGCTGAATCAAATCTACCGATGGGATA] [+] EMBL AL930017 [GGCCAAGAATTCGCCCCCGAGGTGTCTNCATCGAAACGCGTAGTTTTGCAGAAAGTTTACAAGTAAAAGCAGCTAAAAAATGGCGGAATAGCGGTGCGGATGTGAGAGCCGAAGCGGGAGTTTGTGGTGCCNGGTAAAAGCTGAATCAAATCTACCGATGGGATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9015#0 ------------------------------CCGCCCACGCGTCCGCCCACGCGTCCG-GC 29 consensus_9015#2 ATTGCCCGAGGTTNGCTCGCACGAAAAGCAAAACAAAAACATAAATCTTCCACTCCGAGC 60 consensus_9015#3 --------------------------------GGCCAAGAATTCGCCCCCGAGGTGT--C 26 consensus_9015#1 ---------------------------------------------CAGATTGCCCCAGGC 15 * consensus_9015#0 GACATCGAAACGCGTAGTTTTGCAGAAAGTTTACAA-TAAAAGCAGCTAAAAA-TGGCGG 87 consensus_9015#2 GCCATCGAAACGCGTAGTTTTGCAGAAAGTTTACAA-TAAAAGCAGCTAAAAA-TGGCAG 118 consensus_9015#3 TNCATCGAAACGCGTAGTTTTGCAGAAAGTTTACAAGTAAAAGCAGCTAAAAAATGGCGG 86 consensus_9015#1 TTAATCGAAACGCGTAGTTTTGCACGAAAGTTACAA-TAAAAGCAGCTAAAAA-TGGCGG 73 ********************* ** ****** **************** **** * consensus_9015#0 AA-AGCGGTGCGGATG-GAGAGCCGAAGCGGGAGTTTGTGGTGCCGG--AAAAGCTGA-T 142 consensus_9015#2 AA-AGCTGTGCGGATG-GAGAGCCGAAGCGGGAGTTTGTGGTGCCGG--AAAAGCTGA-T 173 consensus_9015#3 AATAGCGGTGCGGATGTGAGAGCCGAAGCGGGAGTTTGTGGTGCCNGGTAAAAGCTGAAT 146 consensus_9015#1 AA-AGCGGTGCGGATGTGAGAGCCGAAGCGGGAGTTTGTGGTGCCGG--AAAAGCTGA-T 129 ** *** ********* **************************** * ********* * consensus_9015#0 CAAATC-ACCGATGGATAT--GGAGCTGTG-GCAAATGTCGG--AATGCTATTACGATCT 196 consensus_9015#2 CAAATC-ACCGATGGATAT--GGAGCTGTG-GCAAATGTCGG--AATGTTATTACGATCT 227 consensus_9015#3 CAAATCTACCGATGGG-AT--A-------------------------------------- 165 consensus_9015#1 CAAATC-ACCGATGGATATAGNGAGCTGTGTGCAAATGTCTGTGAATGCTATTACGATCT 188 ****** ******** ** consensus_9015#0 -GATCG-GCT-TCATCAGC-AGCATGTCGGTAGCGTTG---CAGGGTAC-GCGCAAC-AG 247 consensus_9015#2 -GATCG-GCT-TCATCAGC-AGCATGTCGGTAGCGGTG---CAGGGTAC-GCGCAAT-AG 278 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 TGATCGTGCTATCATCAGCCAGCATGTCGGTAGCTGTATGCCAGGGTACTGCGCAACCAG 248 consensus_9015#0 TCAGGAG--GT---TGCGAT--TCCACCT-GTCGTGG---AGAAGCTAA---TGCAA-GC 292 consensus_9015#2 TCAGGAG--GT---TGCGAT--TCCACCC-GTCGTGG---AGAAGCTAA---TGCAA-GC 323 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 TCCAGGGCAGTGTATGCGATATCCCACCCTGTCGTTGGCAAGAAGCTANAATTGCAAAGC 308 consensus_9015#0 GCTGGACCGGTTGGAGCAGCTGGCAATCGAAACGCCCCCGATCGATCAGCCGGCCCGG-- 350 consensus_9015#2 GCTGGACCGGCTGGAGCAGCTGGCAATCGAAACGCCACCGATCGATCAGCCGGCCCGG-- 381 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 GCTGGGACCCTGGTTGGAGCCAGC--TTGGGANATC-CTGAAACACTGGCCCCCCCGGAA 365 consensus_9015#0 TTCGGTAATGTTGCGTTCAAAAGCTGGTTCCAAA-GATGCAGTCGGAAAGCATGCAGCTT 409 consensus_9015#2 TTCGGTAATGTTGCGTTCAAAAGCTGGTTCCAAAAGATGCAGTCGGAAAGCATGCAGCTT 441 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 TTCTGAATCCCAAGGCTGGGANCCCGGGTATCAGNGGTCAAATAGGTAAGC---CGTATC 422 consensus_9015#0 GTTAGCGATGCACTGCCGG--ACACGCTGAAGGATGCGGCCAAGGAGC-TGTGCGTGTAC 466 consensus_9015#2 GTTAGCGACGCACTGCCGG--ACACGCTGAAGGATGCGGCGAAGGAGC-TGTGCGTGTAC 498 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 ACCAACNACAGNCCTTGGGTTATACCCAGAACAGAATNGCCAACGATCCTNGGNGAAAGC 482 consensus_9015#0 TTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCG 526 consensus_9015#2 TTTGTCGATTGTTTCGGGAATCCGACGCGCATTGATTACGGCACGGGGCATGAGCTGGCG 558 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 ACATTTGCACGCTTTGGTTAAAGCAGAATGGCCNACTGCGCCGGANAAAACGCCTTAGAA 542 consensus_9015#0 TTCGTTATGTTTCTGATGTGCTTGTTCAAGACCGGGGCTGTTGAGCGGAAAGATGAGGTT 586 consensus_9015#2 TTCGTCATGTTTCTGATGTGTTTGTTCAAGACCGGGGCTGTAGAGCGGAAGGATGAGGTT 618 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 AAAGGTCGGACTATGACGCGGAGGCCCCAAAGAGGGA----AAAGCACTTCGNTNACGC- 597 consensus_9015#0 GCTGTCGGGTTGAAGTTGTTCCAGAAGTACATCATCCT--GGCAAGAAAGCTGCAGGTAA 644 consensus_9015#2 GCTGTCGGGTTGAAGCTGTTCCAGAAGTACATCATCCT--GGCAAGAAAGCTGCAGGTAA 676 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 -CCNTTTAGTTCANCCTACTCTTCGCTTACANCGANATACGGGNATCANCCGGNAGGGGA 656 consensus_9015#0 CGTACCGAATGGAACCGGCCGGCAGCCA-CGGTGTGTGGAGTTTGGACGACTTTCAGTTC 703 consensus_9015#2 CGTACCGAATGGAACCGGCCGGCAGCCA-CGGTGTGTGGAGTTTGGACGACTTTCAGTTC 735 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 AATACCCC-CGGAANCGCCGACCATCTATCGANATAAAAACACGNGNGGACAACACAAGC 715 consensus_9015#0 GTGCCGTTCATCTGGGGCAGTGCGCAGCTGGCCGTAAACAGTCCGATCGAACCGGCCCAG 763 consensus_9015#2 GTGCCGTTCATCTGGGGCAGTGCGCACTGGCCCGTAAACAGTCCGATCGAACCGGCCCAG 795 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 AGGAGGCCCATTTNG--CAA-GCNTATTGGANCGNTTACCACGGCANACACTAAGNNTAA 772 consensus_9015#0 TTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATC 823 consensus_9015#2 TTCGTGGAGGAGAAATGGATTACCAAGTACAAGAAGGAGCTGATGTTCGTCGGGTGCATC 855 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 ACC-TATGGAAGTCGTAAGGNACNNCTTGGAGATACCAGAAGAAAACCCGNGG-----TG 826 consensus_9015#0 GATTACATACAGCAGGTGAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGGAGC 883 consensus_9015#2 GATTACATACAGCAGGTGAAGACGGGCCACTTTGCCGAACACTCGAATCAGCTGTGGAGC 915 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 GGTNANACACTAGGCATNATGAAAAAGCCCCGGGACAANAA---GCAACATTCAACGAGA 883 consensus_9015#0 ATCAGTGCCGTACCGCAGTGGTCAAAGATCTGTACCGGGCTGATTAAGATGTACCAGAAG 943 consensus_9015#2 ATCAGTGCCGTACCGCAGTGGTCAAAGATCTGTACCGGGCTGATTAAGATGTA------- 968 consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 GTAAGNGC-GCATTGGATCGAGGNGCNATTCATGTACAGCGATNTGGGATACCACAACGG 942 consensus_9015#0 GAGGTGCTGTCGAAGTTTCCCGTCATTCAGCACGTTTACTTCGGGTCTATACTTACACTG 1003 consensus_9015#2 ------------------------------------------------------------ consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 AAAAAAGCTAACAAAATATCAAAANCCCAATGTGATCACAATGANACAAAAGAC-CACGT 1001 consensus_9015#0 AAAACGGTCAAGCCGGGCACAATGTTGCCTAGTCCGCGGCTGGGAATGCTTCCGCGACAG 1063 consensus_9015#2 ------------------------------------------------------------ consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 GGCACAGGCATGT-ATACACAGTAAANCACAGAANAAAANTGGAAAACACGTGGGTCCCG 1060 consensus_9015#0 CAGCAGCAGCGTCCGGCCCCGCCTGCAGTACCACCGCCACCCGCGTTTCCCGGTGGTGAT 1123 consensus_9015#2 ------------------------------------------------------------ consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 GAAGCAAGCCAACCAGGGAAGATTAGATGCACAGCGAAATAAGGGGAAATCGATAA---- 1116 consensus_9015#0 GGAATGTGATAAAACTGTGTATTACACGCTATTAGTTTGTGATTGTTCAAAGAATAAAAT 1183 consensus_9015#2 ------------------------------------------------------------ consensus_9015#3 ------------------------------------------------------------ consensus_9015#1 ------------------------------------------------------------ consensus_9015#0 GTTGAAATTATAAAAAAA 1201 consensus_9015#2 ------------------ consensus_9015#3 ------------------ consensus_9015#1 ------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||