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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9047#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1372 fasta sequence
[ACAACACCTTCAGCCTTCTGTTAATTCTTCTGCCTTGCGATTTTGTGCCCCTCTTATAACTTGAACGTTTAATTCAAATTGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACG-GCACAAGATTGTGTATCAAAGAGTTTGTGTGTTTGTGTGTGAGACGACGCTACCATCTGCCATCACGATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAGCAAATTCGATGATTAGGCAACGATTTGCCTCATGGCTAGATGGCCAGATTCACCAGCCACAACGATCTCGACCCCTGCAACCCCAAAGACACCAGCCATCCAGCACTTGCATTTTGTGTGGTCGCCATCTTG-TTCATATTGCATGGCAATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATTCTGGAAAAGCAGCTCGCATCACTTCTGTTATTGCATGTGCACCGCCTGCCGGCTTGTCATCGCCTCCGATTCTTCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGATCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTCATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTGCGGAGGAGATGTTGGTCAGAATAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACTTTACGCATCATATGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGTTGTGATTGAAAGTATGTGAGTTATCCTCATGCCAGCTCTGTTCAATAAGTATTGAAGATTTCAACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCTGTAATATCCTGGAGATTTGACCCCTGATAAGACCATAGTGCCCAATATGCCGGATCAGAATA-GGGGATCACCGTGACAACTGTGCGATAATCTGAATGTCAAAATAAAGATCATTCGTTTACGGATCGTTGTACTGACAAAAAA]
[+] EMBL BX624141 [ACAACACCTTCAGCCTTCTGTTAATTCTTCTGCCTTGCGATTTTGTG CCTTTTATAAGTTCAACGTTTAGTTCAAATCGATAAAACTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACG GCAGAAGATTGTGTATCAAAGAGTTTGTGTGTTTGTGTGTGAGACGACGCTACCATCTGCCATCACGATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAACAAATTCGTTGATTAGGC ACGATTTGCCTCATGGGTAGATGGCCAGATTCACCAGCCGCAACGATCTCGATCCCTGCAATCGCATAGACACCAGCCATCCAGCATTTGCATTTTGTGTGGCCGCCATCTTG TTCATGTTGCACGACAATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTCATCATCGCTCATACTTGGAATACTGGAAAAGCTTCGCGCATCACTTCTGTTATTGCATGTGCACCGCATGCCGTGTTGTCATCGCCTCCGATTCATCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCGGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTAT ]
[+] EMBL CNS08YK8 [ TCTGTTTATTCTTCTACTTTGCGATTTTGTGCCCCCCTTATAACTTGAACGTTTAATTCAAATTGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACG GCACAAGATTGTGTATCAAAGAGTTTGTGTGTTTGTGTGTGAGACGACGCTACCATCTGCCATCACGATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAGCAAATTCGATGATTAGGCAACGATTTGCCTCATGGCTAGATGGCCAGATTCACCAGCCACAACGATCTCGACCCCTGCAACCCCAAAGACACCAGCCATCCAGCACTTGCATTTTGTGTGGTCGCCATCTTG TTCATATTGCATGGCAATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATTCTGGAAAAGCAGCTCGCATCACTTCTGTTATTGCATGTGCACCGCCTGCCGGCTTGTCATCGCCTCCGATTCTTCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGATCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTCATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTGCGGAGGAGATGTTGGTCAGAATAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACTTTACGCATCATATGACGACATCATTCA ]
[+] EMBL CNS08Z4U [ GCCTTTGTTATAACTTGAACGTATAATTCAAATTGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACGAGCACAAGATTGTGTATCAAAGAGTTTGTGTGTTTGTGTGTGAGACGACGCTACCATCTGCCATCACGATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAGCAAATTCGATGATTAGGCAACGATTTGCCTCATGGCTAGATGGCCAGATTCACCAGCCACAACGATCTCGACCCCTGCAACCCCAAAGACACCAGCCATCCAGCACTTGCATTTTGTGTGGTCGCCATCTTGATTCATATTGCATGGCAATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATTCTGGAAAAGCAGCTCGCATCACTTCTGTTATTGCATGTGCACCGCCTGCCGGCTTGTCATCGCCTCCGATTCTTCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGATCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTCATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTGCGGAGGAGATGTTGGTCAGAATAGCAGCTGTGATTGAAATTGACACCCACCT ]
[-] EMBL CNS08Z4V [ AGCACTTGCATTTTGTGTGGTCGCCATCTTG TTCATATTGCATGGCAATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATTCTGGAAAAGCAGCTCGCATAACTTCTGTTATTGCATGTGCACCCCCTGCCGGCTTGTCATCGCCTCCGATTCTTCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGATCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTCATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTGCGGAGGAGATGTTGGTCAGAATAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACTTTACGCATCATATGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGTTGTGATTGAAAGTATGTGAGTTATCCTCATGCCAGCTCTGTTCAATAAGTATTGAAGATTTCAACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCTGTAATATCCTGGAGATTTGACCCCTGATAAGACCATAGTGCCCAATATGCCGGATCAGAATA GCGGGTCACCGTGACAACTGTGCGATAATCTGAA ]
[-] EMBL CNS08YK9 [ TGGCTATTCTTTTATCATCGCTCATACTTGGAATTCTGGAAAAGCAGCTCGCATAACTTCTGTTATTGCATGTGCAACCCCTGCCGGCTTGTCATCGCCTCCGATTCTTCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGATCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTCATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTGCGGAGGAGATGTTGGTCAGAATAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACTTTACGCATCATATGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGTTGTGATTGAAAGTATGTGAGTTATCCTCATGCCAGCTCTGTTCAATAAGTATTGAAGATTTCAACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCTGTAATATCCTGGAGATTTGACCCCTGATAAGACCATAGTGCCCAATATGCCGGATCAGAATATGGGGATCACCGTGACAACTGTGCGATAATCTGAATGT ]
[-] EMBL AGA280775 [ TGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGTTGTGATTGAAAGTATGTGAGTTATTCTCATGCCAGCTCTGTTCATTAAGTATTGAAGATTTATACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCTGTAATATCCTGGAGATTTGACCCCTGATAAGACCATAGTGCTCAATATGCCGGATCAGAATATGACCATCACCGTGACAACTGTGCGATAATCTGAATGTCAAAATAAAGATCATTCGTTTACGGATCGTTGTACTGACAAAAAA]
consensusID : consensus_9047#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 953 fasta sequence
[CGCAGAATCCCCCGCGGTTTANTGCGCATTTTGTGCTTTGTTATAACTTGTAACGTTTCAATTCAACATTGGTAAAATNCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTGCTGTCCAATCCAGCACGGACAAGATTTGTGTATCGAAGAGTNTGTNCTNGTTCTTGTAGTGTGAGATGANAGCTANCATCTGNCATATGCAATGCGCAAAAACAAGAAGCTCTCTGTGTGTGCTCTGCCGGTATAGGCAGCAATTCGATGTATTAGGCAACAGATTTGCCTCATGGCTAGACCAGATTACGACAGATTCCCCAGCCANAACGATATCGATACCCTGGCNAAACCTAAAGACACCAGGCATCTAGACACTATGCGATATANAGTGTGGCTGACATCTTGTNGCATACTATGCACCGAAAATGACAGACAACGCCATATTAGTATTGAACTNCGGGCGTTTGGGCATATAACTAACTAATACATCACGNCATCATACNTATGTNGAATACTGGAAAAGACTTCAGCGCATCTACTCTCTGTCATCTGCATAGTGCACCGAAACGCCGTGGTANGTCACTCAGCNCTNCAGAANAAACATACGCAGTGTATTGCNCTATCNGCCACTCTTATGGCATTGAACCCCCGACTTAACNCACACACTNCTACCAGANCNGGAGTACATGTACAACATGCACAGAGAGACAANCCCGCCACCGAACACCCAAANCGAAGGCCTGGAAGAAAACANAAACACACCACCAGANGGGAGGNACAGAGCCAAGAACAACCAGGGNCACAAACCAGGAGACGAACATAGGACCCAAAACNNCANNAGGGACNGGAANCCACCCNGGAAAANCGACCACAAACGACNCACACCTGGAGGCACNNNNNGAACACNCNGCACCCGANACAACACCCACCACACAGNA]
[+] EMBL AL930708 [CGCAGAATCCCCCGCGGTTTANTGCGCATTTTGTGCTTTGTTATAACTTGTAACGTTTCAATTCAACATTGGTAAAATNCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTGCTGTCCAATCCAGCACGGACAAGATTTGTGTATCGAAGAGTNTGTNCTNGTTCTTGTAGTGTGAGATGANAGCTANCATCTGNCATATGCAATGCGCAAAAACAAGAAGCTCTCTGTGTGTGCTCTGCCGGTATAGGCAGCAATTCGATGTATTAGGCAACAGATTTGCCTCATGGCTAGACCAGATTACGACAGATTCCCCAGCCANAACGATATCGATACCCTGGCNAAACCTAAAGACACCAGGCATCTAGACACTATGCGATATANAGTGTGGCTGACATCTTGTNGCATACTATGCACCGAAAATGACAGACAACGCCATATTAGTATTGAACTNCGGGCGTTTGGGCATATAACTAACTAATACATCACGNCATCATACNTATGTNGAATACTGGAAAAGACTTCAGCGCATCTACTCTCTGTCATCTGCATAGTGCACCGAAACGCCGTGGTANGTCACTCAGCNCTNCAGAANAAACATACGCAGTGTATTGCNCTATCNGCCACTCTTATGGCATTGAACCCCCGACTTAACNCACACACTNCTACCAGANCNGGAGTACATGTACAACATGCACAGAGAGACAANCCCGCCACCGAACACCCAAANCGAAGGCCTGGAAGAAAACANAAACACACCACCAGANGGGAGGNACAGAGCCAAGAACAACCAGGGNCACAAACCAGGAGACGAACATAGGACCCAAAACNNCANNAGGGACNGGAANCCACCCNGGAAAANCGACCACAAACGACNCACACCTGGAGGCACNNNNNGAACACNCNGCACCCGANACAACACCCACCACACAGNA]
consensusID : consensus_9047#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 852 fasta sequence
[CAACACCTTCAGCCTTCTGTTAATTCTTCTGCCTTGCGATTTTGTGCCT-T-TTATAAGTTCAACGTTTAGTTCAAATTGGTAAAACTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACGGCACAAGATTGTGTATCGAAGAGTTTGTTTGTTTGTGTGTGAGATGACGCTACCATCTGCCATTGCAATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAGCAAATTCGATGTTTAGGCAACGATTTGCCTCATGGCTAGACCAGATTACGCCAGATTCACCAGCCACAACGATATCGATCCCTGCAACCCCAAAGACACCAGCCATCTAGCACTTGCATTTAGTGTGGCCGCCATCTTGTTCATCTTGCACGACAATGACGACACCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATACTGGAAAAGCTTCGCGCATCACTTCTGTTAT-TGC-ATG--TGCACCGCACGCCGTGTTGTCATCGCCTCCGATTCATCGTGTGCATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTGCCGCCGCGTCATGTTCGAGTGCTATTGCATCGGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGAAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGACGACA]
[+] EMBL BX601832 [CAACACCTTCAGCCTTCTGTTAATTCTTCTGCCTTGCGATTTTGTGCCT T TTATAAGTTCAACGTTGAGTTCAAATTGGAAAAACTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACGGCACAAGATTGTGTATCGAAGAGTTTGTTTCTTTGTGTGTGAGATGACGCTACCATCTGCCATTGCAATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAGCAAATTCGATGTTTAGGCAACGATTTGCCTCATGGCTAGACCAGATTACGCCAGATTCACCAGCCACAACGATATCGATCCCTGCAACCCCAAAGACACCAGCCATCTAGCACTTGCATTTAGTGTGGCCGCCATCTTGTTCATCTTGCACGACAATGACGACACCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATACTGGAAAAGCTTCGCGCATCACTTCTGTTAT TGC ATG TGCACCGCATGCCGTGTTGTCATCGCCTCCG ]
[+] EMBL CNS08WR6 [ CTTCAGCCTTCTGTTAATTCTTCTGCCTTGCGATTAACTGCCT T TTATAAGTTCAACGTTTAGTTCAAATTAGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACGGCACAAGATTGTGTATCAAAGAGTTTGTTTGTTTGTGTGTGAGATGACGCTACCATCTGCCATTGCAATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAGCAAATTCGATGTTTAGGCAACGATTTGCCTCATGGCTAGACCAGATTACGCCAGATTCACCAGCCACAACGATATCGATCCCTGCAACCCCAAAGACACCAGC CTTGCATTTAGTGTGGCCGCCATCTTGTTCATCTTGCACGACAATGAAGACACCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATACTGGAAAAGCTTCGCGCATCACTTCTGTTTTAAGCGATGACTGCACCGCACGCCGTGTTGTCATCGCTTCCGATTCATCGTGTGCATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTGCCGCCGCGTCATGTTCGAGTGCTATTGCATCGGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGAAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGACGACA]
[+] EMBL BX614879 [ GCCTTGCGATTTTGTGCCTCTGTTATAACTTGAACGTTTAATTCAAATTGGTAAAACTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTGCTGTCCAATCCAGCACGGCACAAGATTGTGTATCGAAGAGTTTGTTTGTTAGTGTGTGAGATGACGCTACCATCTGCCATTGCAATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAAGCAGCCAATTCGATGTTTAGGCAACGATTTGCCTCATGGCTAGACCAGATTACGCCAGATTCACCAGCCACAACGATATCGATCCCTGCAACCCCAAAGACACCAGCCATCTAGCACTTGCATTTAGTGTGGCCGCCATCTTGTTCATCTTGCACGACAATGACGACACCGTTATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCATACTTGGAATACTGGAAATGCTTCGCGCATCACTTCTGTTAT TGC ATG TGCACCGCACGCCGTGTTGTCATTGCCTCC ATTCATCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCATACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAG ]
consensusID : consensus_9047#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 752 fasta sequence
[TTAAGCGATGACTGCACCGCACGCCGTGTTGTCATCGCTTCCGATTCATCGTGTGCATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTGCCGCCGCGTCATGTTCGAGTGCTATTGCATCGGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGACGACATCATTCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTCATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGCTGGTCAGAAAAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACTTTACGCATCATATGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGTTGTGATTGAAAGTATGTGAGTTATTCTCATGCCAGCTCTGTTCAATAAGTATTGAAGATTTCTACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCTGTAATATCCTGGAGATTTGACCCCTGATAAG]
[-] EMBL CNS08WR7 [TTAAGCGATGACTGCACCGCACGCCGTGTTGTCATCGCTTCCGATTCATCGTGTGCATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTGCCGCCGCGTCATGTTCGAGTGCTATTGCATCGGTTGTAGCCTACTGAGCTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACCGCACGCATCACATGACGACATCATTCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTCATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGCTGGTCAGAAAAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACTTTACGCATCATATGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGTTGTGATTGAAAGTATGTGAGTTATTCTCATGCCAGCTCTGTTCAATAAGTATTGAAGATTTCTACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCTGTAATATCCTGGAGATTTGACCCCTGATAAG]
consensusID : consensus_9047#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[CAACCGCATAGACACCAGCCATCCAGCATTTGCATTTTGTGTGGCCGCCATCTTGTTCATGTTGCGCGACAATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTCATCATCGCTCATACTTGGAATACTGGAAAAGCTTCGCGCATCACTTCTGTTATTGCATGTGCACCGCATGCCGTGTTGTCATCGCCTCCGATTCATCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCCTACTGAACTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACATTACGCATCATATGACG]
[+] EMBL AGA282399 [CAACCGCATAGACACCAGCCATCCAGCATTTGCATTTTGTGTGGCCGCCATCTTGTTCATGTTGCGCGACAATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTCATCATCGCTCATACTTGGAATACTGGAAAAGCTTCGCGCATCACTTCTGTTATTGCATGTGCACCGCATGCCGTGTTGTCATCGCCTCCGATTCATCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTACCGCCGCGTCATGTTCGAGTGCTGTGGCATCAGTTGTAGCCTACTGAACTGTTGAACAACAATCATCGTGGTGTCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTGACCCAACATTACGCATCATATGACG]
consensusID : consensus_9047#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 214 fasta sequence
[CGATTTTGTGCCTTTGTTATAACTTGAACGTTTAATTCAAATTGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTGCTGTCCAATCCAGCACGGCACAAGATTGTGTATCGAAGAGTTTGTTTGTTTGTGTGTGAGATGACGCTACCATCTGCCACCC--CAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL AGA280097 [CGATTTTGTGCCTTTGTTATAACTTGAACGTTTAATTCAAATTGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTGCTGTCCAATCCAGCACGGCACAAGATTGTGTATCGAAGAGTTTGTTTGTTTGTGTGTGAGATGACGCTACCATCTGCCACCC CAAAAAAAA ]
[+] EMBL AGA281794 [ GCCTTTGTTATAACTTGAACGTTTAATTCAAATTGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTGCTGTCCAATCCAGCACGGCACAAGATTGTGTATCGAAGAGTTTGTTTGTTTGTGTGTGAGATGACGCTACCATCTGCCACACANNAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9047#0 ACAACACCTTCAGCCTTCTGTTAATTCTTCTGCCTTGCGATTTTGTGCCCCTCTTATAAC 60
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 TTGAACGTTTAATTCAAATTGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGT 120
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 CTTATCGCCTGCACCTGCTTTTCTGTCCAATCCAGCACGGCACAAGATTGTGTATCAAAG 180
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 --------------------------------CAACACCTTCAGCCTTCTGTTAATTCTT 28
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 AGTTTGTGTGTTTGTGTGTGAGACGACGCTACCATCTGCCATCACGATGCGCAAAAACGA 240
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 CTGCCTTGCGATTTTGTGCCTTTTATAAGTTCAACGTTTAGTTCAAATTGGTAAAACTCG 88
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 GAAGCTTCTGTGTGTGCTTGCCGGTATAGGCAGCAAATTCGATGATTAGGCAACGATTTG 300
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 AGGTTTTACATCTCAGAAGTGGGATACGTCTTATCGCCTGCACCTGCTTTTCTGTCCAAT 148
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 CCTCATGGCTAGATGGCCAGATTCACCAGCCACAACGATCTCGACCCCTGCAACCCCAAA 360
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 CCAGCACGGCACAAGATTGTGTATCGAAGAGTTTGTTTGTTTGTGTGTGAGATGACGCTA 208
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 GACACCAGCCATCCAGCACTTGCATTTTGTGTGGTCGCCATCTTGTTCATATTGCATGGC 420
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 CCATCTGCCATTGCAATGCGCAAAAACGAGAAGCTTCTGTGTGTGCTTGCCGGTATAGGC 268
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 AATGACGACGCCGCCATTTAGTATGAATACGGCCGCTGGCTATTCTTTTATCATCGCTCA 480
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 AGCAAATTCGATGTTTAGGCAACGATTTGCCTCATGGCTAGACCAGATTACGCCAGATTC 328
consensus_9047#1 ------------------------------------------------------------
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 TACTTGGAATTCTGGAAAAGCAGCTCGCATCACTTCTGTTATTGCATGT--GCACC-GCC 537
consensus_9047#3 ---------------------------------TTAAGCGATGAC---T--GCACC-GCA 21
consensus_9047#4 --------------------------CAACCGCATAGACACCAGCCATCCAGCATTTGCA 34
consensus_9047#2 ACCAGCCACAACGATATCGATCCCTGCAACCCCAAAGACACCAGCCATCTAGCACTTGCA 388
consensus_9047#1 --------------------------------------------------CGCAGAATCC 10
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 TGCCGGCTTGTCATCGCCTCCGATTCTTCGTGTG-TATTGCC--TTCCGCCACTT--TAT 592
consensus_9047#3 CGCCGTGTTGTCATCGCTTCCGATTCATCGTGTG-CATTGCC--TTCCGCCACTT--TAT 76
consensus_9047#4 TTTTGTGTGGCCGCCATCTTGTTCATGTTGCGCGACAATGACGACGCCGCCATTTAGTAT 94
consensus_9047#2 TTTAGTGTGGCCGCCATCTTGTTCATCTTGCACGACAATGACGACACCGCCATTTAGTAT 448
consensus_9047#1 CCCGCGGTTTANTGCGCATTTTGTGC-TTTGTTATAACTTGTAACGTTTCAATTCAACAT 69
consensus_9047#5 --------------CG-ATTTTGTGCCTTTGTTATAACTTG-AACGTTT-AATTCAA-AT 42
* * * * * * * **
consensus_9047#0 GGATTGACCCCGCTACCACCC-TCT-ACCGCCGCGTCATGTTCG-AGTGCTGTGGCATCA 649
consensus_9047#3 GGATTGACCCCGCTACCACCC-TCT-GCCGCCGCGTCATGTTCG-AGTGCTATTGCATCG 133
consensus_9047#4 GAATACGGCCGCTGGCTATTC-TTTCATCATCGC-TCATACTTGGAATACTGGAAAAGCT 152
consensus_9047#2 GAATACGGCCGCTGGCTATTC-TTTTATCATCGC-TCATACTTGGAATACTGGAAAAGCT 506
consensus_9047#1 TGGTAAAATNCGAGGTTTTACATCTCAGAAGTGGGATACGTCTT-ATCGCCTGCACCTGC 128
consensus_9047#5 TGGTAAAATTCGAGGTTTTACATCTCAGAAGTGGGATACGTCTT-ATCGCCTGCACCTGC 101
* * * * * * * *
consensus_9047#0 GTTGTAGCCTACTGAGCTGTTGAACAACAATCAT-CGTGGTGTCGTTCAGTATTCAGGTT 708
consensus_9047#3 GTTGTAGCCTACTGAGCTGTTGAACAACAATCAT-CGTGGTGTCGTTCAGTATTCAGGTT 192
consensus_9047#4 TCGCGCATCACTTCTGTTATTGCATGTGCACCGCATGCCGTGTTGTCATCGCCTCCGATT 212
consensus_9047#2 TCGCGCATCACTTCTGTTATTGCATGTGCACCGCACGCCGTGTTGTCATCGCCTCCGATT 566
consensus_9047#1 TTTGCTGTCCAATCCAGCACGG-ACAAGATTTGTGTATCGAAGAGTNT-GTNCTNGTTCT 186
consensus_9047#5 TTTGCTGTCCAATCCAGCACGGCACAAGATT-GTGTATCGAAGAGTTT-GTTTGT----T 155
* * * * * ** *
consensus_9047#0 CATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTT 768
consensus_9047#3 CATCCTGATCGACATTGTCCTTATGCTTGGCTGTAACTTCTGTAAACGTCAGCAAGACTT 252
consensus_9047#4 CATCGTGTGTATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTA--CCG 270
consensus_9047#2 CATCGTGTGCATTGCCTTCCGCCACTTTATGGATTGACCCCGCTACCACCCTCTG--CCG 624
consensus_9047#1 TGTAGTGTGAGATGANAGCTANCATCTGNCATATGCAATGCGCAAAAACAAGAAG---CT 243
consensus_9047#5 TGT-GTGTGAGATGAC-GCTACCATCTGCCACCCCAAAAAAAAAAAAAAAAAAAA---AA 210
* ** * * *
consensus_9047#0 CTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACC 828
consensus_9047#3 CTGGAGGAGATGCCGATCAGCGGCAGCAGTACTTACACCCACTATGAGATTGATTCAACC 312
consensus_9047#4 CCGCGTCATGTTCGAGT--GCTGTGGCATCAGTTGTAGCC--TACTGAACTG-TTGAACA 325
consensus_9047#2 CCGCGTCATGTTCGAGT--GCTATTGCATCGGTTGTAGCC--TACTGAGCTG-TTGAACA 679
consensus_9047#1 CTCTGTGTGTGCTCTGCCGGTATAGGCAGCAATTCGATGTATTAGGCAACAGATTTGCCT 303
consensus_9047#5 AAAA-------------------------------------------------------- 214
consensus_9047#0 GCACGCATCACATGA---------TCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTC 879
consensus_9047#3 GCACGCATCACATGACGACATCATTCAGGATCAGTTCTTTTCGATATCAGCATCGTCCTC 372
consensus_9047#4 ACAATCATCGTGGTG-----TCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTT 380
consensus_9047#2 ACAATCATCGTGGTG-----TCGTTCAGTATTCAGGTTCATCCTGATCGACATTGTCCTT 734
consensus_9047#1 CATGGCTAGACCAGAT--TACGACAGATTCCCCAGCCANAACGATATCGATACCCTGGCN 361
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 ATGCTTGGCTGTAACTTCCGTA-AACTTCAGCAAGACTTGCGGAGGAGATGTTGGTCAGA 938
consensus_9047#3 ATGCTTGGCTGTAACTTCCGTA-AACTTCAGCAAGACTTCCGGAGGAGATGCTGGTCAGA 431
consensus_9047#4 ATGCTTGGCTGTAACTTCCGTA-AACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGA 439
consensus_9047#2 ATGCTTGGCTGTAACTTCTGTA-AACGTCAGCAAGACTTCTGGAGGAGATGCCGATCAG- 792
consensus_9047#1 AAACCTAAAGACACCAGGCATCTAGACACTATGCGATATANAGTGTGGCTGACATCTTGT 421
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 ATAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTG--ACCCAACTTTACGCAT-- 994
consensus_9047#3 AAAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTG--ACCCAACTTTACGCAT-- 487
consensus_9047#4 AAAGCAGCTGTGATTGAAATTGACACCCACCTTGAAATTG--ACCCAACATTACGCAT-- 495
consensus_9047#2 -CGGCAGAAGT-------ACTTACACCCACTATGAGATTG--ATTCAACCGCACGCAT-- 840
consensus_9047#1 NGCATACTATGCACCGAAAATGACAGACAACGCCATATTAGTATTGAACTNCGGGCGTTT 481
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 ---CATATGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCT 1051
consensus_9047#3 ---CATATGACGACATCATTCAGGATCAACACCTTTCGATATCATCATCGTCCTTATGCT 544
consensus_9047#4 ---CATATGACG------------------------------------------------ 504
consensus_9047#2 ---CACATGACGACA--------------------------------------------- 852
consensus_9047#1 GGGCATATAACTAACTAATACATCACGNCATCATACNTATGTNGAATACTGGAAAAGACT 541
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 TGGCTGTA---ACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAA 1108
consensus_9047#3 TGGCTGTA---ACTTCCGTAAACTTCAGCAAGACTTCCGGAGGAGATGTTGGTCAGAAAA 601
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 TCAGCGCATCTACTCTCTGTCATCTGCATAGTGCACCGAAACGCCGTGGTANGTCACTCA 601
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 GCAGTTGTGATTGAAAGTATGTGAGTTATCCTCATGCCAGCTCTGTTCAATAAGTATTGA 1168
consensus_9047#3 GCAGTTGTGATTGAAAGTATGTGAGTTATTCTCATGCCAGCTCTGTTCAATAAGTATTGA 661
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 GCNCTNCAGAANAAACATACGCAGTGTATTGCNCTATCNGCCACTCTTATGGCATTGAAC 661
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 AGATTTCAACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCT 1228
consensus_9047#3 AGATTTCTACAGTAAAGCCGCTCAAATTGAGGTCAATTTGTTTGTCAGGATAGCCGAGCT 721
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 CCCCGACTTAACNCACACACTNCTACCAGANCNGGAGTACATGTACAACATGCACAGAGA 721
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 GTAATATCCTGGAGATTTGACCCCTGATAAGACCATAGTGCCCAATATGCCGGATCAGAA 1288
consensus_9047#3 GTAATATCCTGGAGATTTGACCCCTGATAAG----------------------------- 752
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 GACAANCCCGCCACCGAACACCCAAANCGAAGGCCTGGAAGAAAACANAAACACACCACC 781
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 TAGGGGATCACCGTGACAACTGTGCGATAATCTGAATGTCAAAATAAAGATCATTCGTTT 1348
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 AGANGGGAGGNACAGAGCCAAGAACAACCAGGGNCACAAACCAGGAGACGAACATAGGAC 841
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 ACGGATCGTTGTACTGACAAAAAA------------------------------------ 1372
consensus_9047#3 ------------------------------------------------------------
consensus_9047#4 ------------------------------------------------------------
consensus_9047#2 ------------------------------------------------------------
consensus_9047#1 CCAAAACNNCANNAGGGACNGGAANCCACCCNGGAAAANCGACCACAAACGACNCACACC 901
consensus_9047#5 ------------------------------------------------------------
consensus_9047#0 ----------------------------------------------------
consensus_9047#3 ----------------------------------------------------
consensus_9047#4 ----------------------------------------------------
consensus_9047#2 ----------------------------------------------------
consensus_9047#1 TGGAGGCACNNNNNGAACACNCNGCACCCGANACAACACCCACCACACAGNA 953
consensus_9047#5 ----------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||