These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9051#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1219 fasta sequence [CAATAAC-GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG-AACACAAACACAAACGCCC-ATCGCAAGGGTCCCACGAACTGGCT--------GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG-TC-TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT-CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT----AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC-GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG-TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA-CGACTACGTCCCGGAGCTGTACGCCACCTTTAC-GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC-CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG-----CTC----TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG-AAAAAAAGT-ACTTCGCAAGAAGAAACGGTAAAAAAAAAAAAAA] [+] EMBL CNS08P6K [ AATAACGGGAACA TGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGGCGCAGACGCAACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAGTTCTTTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCA CAATCCGGAGATGCGCA CTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAGTTTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGAC ] [+] EMBL CNS08Z4M [cgcTACC GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACACCC ATCGCAAGGGTCCCACGGACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCT ] [+] EMBL CNS08V91 [ AC GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCTATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGTGCGGCGAGGCAGTAACGTgc ] [+] EMBL AY187040 [ gtCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAAACG AACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCTGTCCGTTCGTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAAGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACACACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGGTCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGAGTACGAGCTGGGCGTCCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGTTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTTAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCTCACACACACGCGCTCCTCCATGTCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACGAAAAAAAAGT ACTTCGCAAGAAGAAACGGTAAAAAAAAAAAAAA] [+] EMBL CNS08VJ7 [ TGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACGCCCAATCGCAAGGGTCCCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGCCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAG AATCCGGAGATGCGCA CTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACCGGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGA ] [+] EMBL BM606356 [ ccgCACGAACTGGCT GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTTAACGT CGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAA AT AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACC GGGCTGCAC ] [-] EMBL CNS08P6L [ TGTGAACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGAAACACACAGACAGGTCGAGTGAAAATAT AAAAAAATGGAACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCTGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTACGGGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG CTC TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGT Aatcg ] [+] EMBL BX604492 [ AACGGAGTCAACGT CGGCGAAGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACACACAGGTCGAGTGAAAATATAAAAAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAAGCCCGCCCGAAACTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCAGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTT ] [-] EMBL CNS08VJ8 [ ACAGACAGGTCGAGTGAAAATAT AAAAAAATGGAACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGGAGTGTCGCTCGGCAACCCGGTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAAAACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTCGCCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTCTCCCGTATTCTTTTACACCCACACACACACG CTC TCCCCACACACAACTTG ] [+] EMBL BX618342 [ GGTCGAGTGAAAATATAAAAAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAAGCCCGCCCAAAACTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCAGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGAGTACGAGCTGGGCGTCCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGACACTGCGTAGAAGTACGC ] [-] EMBL CNS08Z4N [ GATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG CTC TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGTGAC TCGCAAGAAGA ] [-] EMBL CNS08V92 [ CTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGACCGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACAAACACACG CTC TCCCCACACACAACTTGTTTTTCGGTTCCATCAACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGT ATTGCGCAAGA ] consensusID : consensus_9051#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 747 fasta sequence [AGATCGCCCGAGGNTAGTCGAGTGAAAATAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGGGCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGCTGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAGGATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA] [+] EMBL AL933213 [AGATCGCCCGAGGNTAGTCGAGTGAAAATAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGGGCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGCTGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAGGATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA] consensusID : consensus_9051#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 545 fasta sequence [CCGCGGACGCGTGGGTCGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACCGGGCTGCACC] [+] EMBL BM641012 [CCGCGGACGCGTGGGTCGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACCGGGCTGCACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9051#0 CAATAACGGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGAT 60 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 ------------------------------------------------------------ consensus_9051#0 CTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACGAACACAAACACAAACG 120 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 ------------------------------------------------------------ consensus_9051#0 CCCATCGCAAGGGTCCCACGAACTGGCTGTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGC 180 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 ------------------------------------------------------------ consensus_9051#0 CGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAGTCTTTGTTGTGCACT 240 consensus_9051#2 ---------------------------------------CCGCGGACG----CGTG-GGT 16 consensus_9051#1 ------------------------------------------------------------ consensus_9051#0 CGCTCCGAACGGAGTCAACGTCGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGC 300 consensus_9051#2 CGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGC 76 consensus_9051#1 ------------------------------------------------------------ consensus_9051#0 TGAATAAAGACACACACAGACAGGTCGAGTGAAAATATAAAAAAATGGCACTGCTACTCC 360 consensus_9051#2 TGAATAAAGACACACACAGACAGGTCGAGTGAAAATA--AAAAAATGGCACTGCTACTCC 134 consensus_9051#1 -------AGATCGCCCGAGGNTAGTCGAGTGAAAATA---AAAAATGGCACTGCTACTCC 50 *** * ** ************** ******************** consensus_9051#0 GTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 420 consensus_9051#2 GTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 194 consensus_9051#1 GTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 110 ******************** ** ************************************ consensus_9051#0 ACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 480 consensus_9051#2 ACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 254 consensus_9051#1 ACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 170 ********************* ************************************** consensus_9051#0 CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACC 540 consensus_9051#2 CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATC 314 consensus_9051#1 CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATC 230 ********************************************************** * consensus_9051#0 AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCG 600 consensus_9051#2 AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCG 374 consensus_9051#1 AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCG 290 ************************************************* ** ******* consensus_9051#0 CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 660 consensus_9051#2 CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 434 consensus_9051#1 CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 350 ************************************************************ consensus_9051#0 GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 720 consensus_9051#2 GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 494 consensus_9051#1 GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 410 ************************************************************ consensus_9051#0 TGCTGGCCGATTACGTCGGTTCC-GGACCGCCGCAG-GGTACCGGGCTGCACCGGTACGT 778 consensus_9051#2 TGCTGGCCGATTACGTCGGTTCC-GGACCACCGCAG-GGTACCGGGCTGCACC------- 545 consensus_9051#1 TGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGT 470 *********************** ***** ****** **************** consensus_9051#0 GTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAG 838 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 GTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGC 530 consensus_9051#0 GAACCCGAACCGTGGCAAGTGGAATCCGGCCGAGTTTGTGAAGGATTACGAGCTGGGCGT 898 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 AGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGG 590 consensus_9051#0 TCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGACGACTACGTCCCGGAGCTGTACGC 958 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 GCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGC 650 consensus_9051#0 CACCTTTACGGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAA 1018 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 TGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAG 710 consensus_9051#0 TCGTAAAACTCCCCTCCCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATC 1078 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 GATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA----------------------- 747 consensus_9051#0 CTCTCACACCCACACACACACGCTCTCCCCACACACAACTTGTTTTTCGGTTCCATCCAC 1138 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 ------------------------------------------------------------ consensus_9051#0 CGCACAAAATCACCGTGTTACAATAAAAAAACATAACGAAAAAAAGTACTTCGCAAGAAG 1198 consensus_9051#2 ------------------------------------------------------------ consensus_9051#1 ------------------------------------------------------------ consensus_9051#0 AAACGGTAAAAAAAAAAAAAA 1219 consensus_9051#2 --------------------- consensus_9051#1 --------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||