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Anopheles gambiae
cluster # 9051 cluster # 9051       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9051#0 length = 1219 sequences # 12  
consensus_9051#1 length = 747 sequences # 1  
consensus_9051#2 length = 545 sequences # 1  

consensusID : consensus_9051#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1219
fasta sequence
                              [CAATAAC-GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG-AACACAAACACAAACGCCC-ATCGCAAGGGTCCCACGAACTGGCT--------GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG-TC-TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT-CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT----AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC-GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG-TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA-CGACTACGTCCCGGAGCTGTACGCCACCTTTAC-GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC-CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG-----CTC----TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG-AAAAAAAGT-ACTTCGCAAGAAGAAACGGTAAAAAAAAAAAAAA]

[+] EMBL CNS08P6K             [ AATAACGGGAACA TGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGGCGCAGACGCAACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCT        GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAGTTCTTTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT    AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCA CAATCCGGAGATGCGCA CTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAGTTTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGAC                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08Z4M             [cgcTACC GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACACCC ATCGCAAGGGTCCCACGGACTGGCT        GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT    AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08V91             [     AC GGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCTATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCT        GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGTGCGGCGAGGCAGTAACGTgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AY187040             [         gtCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAAACG AACACAAACACAAACGCCC ATCGCAAGGGTCCCACGAACTGGCTGTCCGTTCGTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAAGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACACACAGGTCGAGTGAAAATAT    AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGGTCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGAGTACGAGCTGGGCGTCCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGTTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTTAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCTCACACACACGCGCTCCTCCATGTCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACGAAAAAAAAGT ACTTCGCAAGAAGAAACGGTAAAAAAAAAAAAAA]
[+] EMBL CNS08VJ7             [                       TGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGATCTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACG AACACAAACACAAACGCCCAATCGCAAGGGTCCCACGAACTGGCT        GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGCCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAT    AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAG AATCCGGAGATGCGCA CTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACCGGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGA                                                                                                                                                                                                                                                                     ]
[+] EMBL BM606356             [                                                                                                                                        ccgCACGAACTGGCT        GTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGCCGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAG TC TTTGTTGTGCACTCGCTCCGAACGGAGTTAACGT CGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAA  AT    AAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACC GGGCTGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS08P6L             [                                                                                                                                                                                                                                                     TGTGAACTCGCTCCGAACGGAGTCAACGT CGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGAAACACACAGACAGGTCGAGTGAAAATAT    AAAAAAATGGAACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCTGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTACGGGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG     CTC    TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGT Aatcg                             ]
[+] EMBL BX604492             [                                                                                                                                                                                                                                                                    AACGGAGTCAACGT CGGCGAAGCAGTAACGTCGCCGTGAATCGCTCTTTCAGCTGAATAAAGACACACACACACAGGTCGAGTGAAAATATAAAAAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAAGCCCGCCCGAAACTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCAGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08VJ8             [                                                                                                                                                                                                                                                                                                                                         ACAGACAGGTCGAGTGAAAATAT    AAAAAAATGGAACTGCTACTCCGTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGGAGTGTCGCTCGGCAACCCGGTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAAAACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTCGCCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTCTCCCGTATTCTTTTACACCCACACACACACG     CTC    TCCCCACACACAACTTG                                                                                                     ]
[+] EMBL BX618342             [                                                                                                                                                                                                                                                                                                                                                GGTCGAGTGAAAATATAAAAAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACCAGCTCACGCCGACCCAGGTAAAAGCCCGCCCAAAACTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCAGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGAGTACGAGCTGGGCGTCCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGACACTGCGTAGAAGTACGC                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08Z4N             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACC GGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCCGAG TTTGTGAAGGATTACGAGCTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGA CGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACACACACACG     CTC    TCCCCACACACAACTTGTTTTTCGGTTCCATCCACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGTGAC TCGCAAGAAGA                    ]
[-] EMBL CNS08V92             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTGGGCGTTCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGACCGACTACGTCCCGGAGCTGTACGCCACCTTTAC GGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATCGTAAAACTCCCCTC CCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCTCTCACACCCACAAACACACG     CTC    TCCCCACACACAACTTGTTTTTCGGTTCCATCAACCGCACAAAATCACCGTGTTACAATAAAAAAACATAACG AAAAAAAGT ATTGCGCAAGA                       ]


>consensus_9051#0 CAATAACGGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGAT CTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACGAACACAAACACAAACG CCCATCGCAAGGGTCCCACGAACTGGCTGTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGC CGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAGTCTTTGTTGTGCACT CGCTCCGAACGGAGTCAACGTCGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGC TGAATAAAGACACACACAGACAGGTCGAGTGAAAATATAAAAAAATGGCACTGCTACTCC GTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA ACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACC AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCG CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG TGCTGGCCGATTACGTCGGTTCCGGACCGCCGCAGGGTACCGGGCTGCACCGGTACGTGT TCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAGGA ACCCGAACCGTGGCAAGTGGAATCCGGCCGAGTTTGTGAAGGATTACGAGCTGGGCGTTC CGGTTGCCGGCAACTTCTACCAGGCCCAGTACGACGACTACGTCCCGGAGCTGTACGCCA CCTTTACGGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAATC GTAAAACTCCCCTCCCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATCCT CTCACACCCACACACACACGCTCTCCCCACACACAACTTGTTTTTCGGTTCCATCCACCG CACAAAATCACCGTGTTACAATAAAAAAACATAACGAAAAAAAGTACTTCGCAAGAAGAA ACGGTAAAAAAAAAAAAAA



consensusID : consensus_9051#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 747
fasta sequence
                              [AGATCGCCCGAGGNTAGTCGAGTGAAAATAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGGGCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGCTGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAGGATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA]

[+] EMBL AL933213             [AGATCGCCCGAGGNTAGTCGAGTGAAAATAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGTGTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGCAGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGGGCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGCTGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAGGATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA]


>consensus_9051#1 AGATCGCCCGAGGNTAGTCGAGTGAAAATAAAAAATGGCACTGCTACTCCGTGTGACCGT TGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAAC CGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAAC GATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCC GACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACAC GCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAA ACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGA TTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGTGTTCCTCGTC TACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGCAGGAACCCGA ACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGGGCGTCCGGGT TGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGCTGTACGCCAC TTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAGGATCTTCGTA TCGTAATCCCTACCCANTGGTTTCTTA



consensusID : consensus_9051#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 545
fasta sequence
                              [CCGCGGACGCGTGGGTCGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACCGGGCTGCACC]

[+] EMBL BM641012             [CCGCGGACGCGTGGGTCGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAAAAAAATGGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACCGGGCTGCACC]


>consensus_9051#2 CCGCGGACGCGTGGGTCGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGT GATTCGCTCTTTCAGCTGAATAAAGACACACACAGACAGGTCGAGTGAAAATAAAAAAAT GGCACTGCTACTCCGTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCG CGGTCAAGCGGCGAACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCT GATCGACGTCGCACCGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGT GTCGCTCGGCAATCAGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGA GGTGGAACCGAGCGCCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAG CAATCCGGAGATGCGCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGT CGATGCGGGCGACGTGCTGGCCGATTACGTCGGTTCCGGACCACCGCAGGGTACCGGGCT GCACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9051#0      CAATAACGGCCCACGGGTCTGCTGCTGTCGTTGTAGCCCGTCTCGTACATCGCGCTTGAT 60
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      ------------------------------------------------------------
                                                                                  

consensus_9051#0      CTGCCATCGTCAAGGAAGGGGAAGCGTCTTCTAAGACGCAGACGAACACAAACACAAACG 120
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      ------------------------------------------------------------
                                                                                  

consensus_9051#0      CCCATCGCAAGGGTCCCACGAACTGGCTGTCCGTCCGGCTGTCTGTCTGTCTGTCTCCGC 180
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      ------------------------------------------------------------
                                                                                  

consensus_9051#0      CGTCTGGACACTAGGGGGACCCGCTACGAACGGCCGCAGTCGCAGTCTTTGTTGTGCACT 240
consensus_9051#2      ---------------------------------------CCGCGGACG----CGTG-GGT 16
consensus_9051#1      ------------------------------------------------------------
                                                                                  

consensus_9051#0      CGCTCCGAACGGAGTCAACGTCGGCGAGGCAGTAACGTCGCCGTGAATCGCTCTTTCAGC 300
consensus_9051#2      CGCTCCGAACGGAGTTAACGTCGGCGAGGCAGTAACGTCGCCGTGATTCGCTCTTTCAGC 76
consensus_9051#1      ------------------------------------------------------------
                                                                                  

consensus_9051#0      TGAATAAAGACACACACAGACAGGTCGAGTGAAAATATAAAAAAATGGCACTGCTACTCC 360
consensus_9051#2      TGAATAAAGACACACACAGACAGGTCGAGTGAAAATA--AAAAAATGGCACTGCTACTCC 134
consensus_9051#1      -------AGATCGCCCGAGGNTAGTCGAGTGAAAATA---AAAAATGGCACTGCTACTCC 50
                             ***    *  **    **************   ********************

consensus_9051#0      GTGTGACCGTTGCGTGCGGTACAATTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 420
consensus_9051#2      GTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 194
consensus_9051#1      GTGTGACCGTTGCGTGCGGTGCAGTTCTAGCGCTGGTGACCGTTCGCGGTCAAGCGGCGA 110
                      ******************** ** ************************************

consensus_9051#0      ACCCAACAACCGAAGCGTTTGGGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 480
consensus_9051#2      ACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 254
consensus_9051#1      ACCCAACAACCGAAGCGTTTGAGCGCAACGAAATCGTGCCGGATCTGATCGACGTCGCAC 170
                      ********************* **************************************

consensus_9051#0      CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAACC 540
consensus_9051#2      CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATC 314
consensus_9051#1      CGGAGCAAACGATCAAGATCACCTACCCCCAGTCGGACGTGGAAGTGTCGCTCGGCAATC 230
                      ********************************************************** *

consensus_9051#0      AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTTGAGCCGAGCG 600
consensus_9051#2      AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCG 374
consensus_9051#1      AGCTCACGCCGACCCAGGTAAAGGCCCGCCCGAAGCTGTGCTGGGAGGTGGAACCGAGCG 290
                      ************************************************* ** *******

consensus_9051#0      CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 660
consensus_9051#2      CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 434
consensus_9051#1      CCCTCTACACGCTGCTGATGGCCGATCCGGATGCACCGTCGCGCAGCAATCCGGAGATGC 350
                      ************************************************************

consensus_9051#0      GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 720
consensus_9051#2      GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 494
consensus_9051#1      GCAGCTGGAAACACTGGCTGGTGGGTAACATCCCCGGCGCGGACGTCGATGCGGGCGACG 410
                      ************************************************************

consensus_9051#0      TGCTGGCCGATTACGTCGGTTCC-GGACCGCCGCAG-GGTACCGGGCTGCACCGGTACGT 778
consensus_9051#2      TGCTGGCCGATTACGTCGGTTCC-GGACCACCGCAG-GGTACCGGGCTGCACC------- 545
consensus_9051#1      TGCTGGCCGATTACGTCGGTTCCTGGACCACCGCAGTGGTACCGGGCTGCACCGGTACGT 470
                      *********************** ***** ****** ****************       

consensus_9051#0      GTTCCTCGTCTACAAGCAGCCGTCCCGCATTGTGTTTAACGAAACCGTGCTCAGCAGCAG 838
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      GTTCCTCGTCTACAAGCAGCCGTCCCGGATTGTGTTTAACGAAACCGGTGCTCAGCCAGC 530
                                                                                  

consensus_9051#0      GAACCCGAACCGTGGCAAGTGGAATCCGGCCGAGTTTGTGAAGGATTACGAGCTGGGCGT 898
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      AGGAACCCGAACCGTGGCAAGTGGAATCCGGCGAGTATGTTGAAGNGATTTACGAGCTGG 590
                                                                                  

consensus_9051#0      TCCGGTTGCCGGCAACTTCTACCAGGCCCAGTACGACGACTACGTCCCGGAGCTGTACGC 958
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      GCGTCCGGGTTGCCGGCAACTTCTACCCAGGCCCAGTACGGAGGACTACGTNCCGGAGGC 650
                                                                                  

consensus_9051#0      CACCTTTACGGATACGGCGTAGAAGTACGCGACCAAAAAACGAGGCAGGATCTTCGTTAA 1018
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      TGTACGCCACTTTACGGATACGGCGGTAGAAAGTACGCGACAACAAAAAAAACGAGGCAG 710
                                                                                  

consensus_9051#0      TCGTAAAACTCCCCTCCCCAGTTCCCCTTGCTTCCTTCCGTTGCGTTCCTTTCCCGTATC 1078
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      GATCTTCGTATCGTAATCCCTACCCANTGGTTTCTTA----------------------- 747
                                                                                  

consensus_9051#0      CTCTCACACCCACACACACACGCTCTCCCCACACACAACTTGTTTTTCGGTTCCATCCAC 1138
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      ------------------------------------------------------------
                                                                                  

consensus_9051#0      CGCACAAAATCACCGTGTTACAATAAAAAAACATAACGAAAAAAAGTACTTCGCAAGAAG 1198
consensus_9051#2      ------------------------------------------------------------
consensus_9051#1      ------------------------------------------------------------
                                                                                  

consensus_9051#0      AAACGGTAAAAAAAAAAAAAA 1219
consensus_9051#2      ---------------------
consensus_9051#1      ---------------------
                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)