These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_906#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence [CAGAATCGGCACGATGGCAGCAGCGAGGCAAACACACGCTAGCAAGCCAGCTTTCCGATTCATCAATCAATTCTACTGCCCAAACATGAAATCGTTTCAAATCGCCACCCTAACCGTGCTGCTGGTGCTGTTGGCCGGTACCGCATCGGCCAAGAAAGCGTCCACCATCTTCGGCATGCCGCTGCAGCAGGATCCAGTGCCCGCCACCTCCACCTTCATCGTGTCCGACTTTCTGCAGTTCCTGCAAACGGCCGTGACCTGCTTCAACAAGCTGCGAATCCCAGAGGAACGGTTCCCGCTCTACCTGGCCGGCGTGTTCCCGAACTGTCCGGAAACGCAATGCTTCGTGCGCTGCCTGTCCGCCAACCTGAACCTGTACTGTGACGAAACGGGCTCGGATATCGACCGGCACTACCTGCAGTACGGGCTGGGCCAGGACTACAACTGCTTCCGCCAGAAGGCCGAGCAGTGTCTGGCCGCTAACACTTCGCCGTGCAACGATCCGTGCGAGGCTGCGTACAAGCAGGAGCTCTGCTTCCTCGACGAGTTCCGCAAGTACGTCGACTCGAACATGAACTCGCTCATCGCGGCCGTCGCTGTGGAAAAGGCCGAACAGAACCCGGTATACTACAACATGCTGGCTCANATCNNCTCANGTGACGCACTGTCGGAACACAGGAAAATAAACTATAG] [+] EMBL BX468191 [CAGAATCGGCACGATGGCAGCAGCGAGGCAAACACACGCTAGCAAGCCAGCTTTCCGATTCATCAATCAATTCTACTGCCCAAACATGAAATCGTTTCAAATCGCCACCCTAACCGTGCTGCTGGTGCTGTTGGCCGGTACCGCATCGGCCAAGAAAGCGTCCACCATCTTCGGCATGCCGCTGCAGCAGGATCCAGTGCCCGCCACCTCCACCTTCATCGTGTCCGACTTTCTGCAGTTCCTGCAAACGGCCGTGACCTGCTTCAACAAGCTGCGAATCCCAGAGGAACGGTTCCCGCTCTACCTGGCCGGCGTGTTCCCGAACTGTCCGGAAACGCAATGCTTCGTGCGCTGCCTGTCCGCCAACCTGAACCTGTACTGTGACGAAACGGGCTCGGATATCGACCGGCACTACCTGCAGTACGGGCTGGGCCAGGACTACAACTGCTTCCGCCAGAAGGCCGAGCAGTGTCTGGCCGCTAACACTTCGCCGTGCAACGATCCGTGCGAGGCTGCGTACAAGCAGGAGCTCTGCTTCCTCGACGAGTTCCGCAAGTACGTCGACTCGAACATGAACTCGCTCATCGCGGCCGTCGCTGTGGAAAAGGCCGAACAGAACCCGGTATACTACAACATGCTGGCTCANATCNNCTCANGTGACGCACTGTCGGAACACAGGAAAATAAACTATAG] consensusID : consensus_906#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 495 fasta sequence [GTCCACCATCTTCGGCATGCCGCTGCAGCAGGATCCAGTGCCCGCCACCTCCACCTTCATCGTGTCCGACTTTCTGCAGTTCCTGCAAACGGCCGTGACCTGCTTCAACAAGCTGCGAATCCCAGAGGAACGGTTCCCGCTCTACCTGGCCGGCGTGTTCCCGAACTGTCCGGAAACGCAATGCTTCGTGCGCTGCCTGTCCGCCAACCTGAACCTGTACTGTGACGAAACGGGCTCGGATATCGACCGGCACTACCTGCAGTACGGGCTGGGCCAGGACTACAACTGCTTCCGCCAGAAGGCCGAGCAGTGTCTGGCCGCTAACACTTTCGCCGTGCCACGATCCGTGCGAGGCTGCGTACAAGCAGGAGCTCTGCTTCCTCGACGAGTCCCGCAAGTACGTTGACTCGAACATGAACTCGCTCANCGCGGCCGTCGCTGTGGAAAAGGCCGAACAGANNCCGGTATACTACACATGCTGCTCACAACTAAGGT] [+] EMBL BX619388 [GTCCACCATCTTCGGCATGCCGCTGCAGCAGGATCCAGTGCCCGCCACCTCCACCTTCATCGTGTCCGACTTTCTGCAGTTCCTGCAAACGGCCGTGACCTGCTTCAACAAGCTGCGAATCCCAGAGGAACGGTTCCCGCTCTACCTGGCCGGCGTGTTCCCGAACTGTCCGGAAACGCAATGCTTCGTGCGCTGCCTGTCCGCCAACCTGAACCTGTACTGTGACGAAACGGGCTCGGATATCGACCGGCACTACCTGCAGTACGGGCTGGGCCAGGACTACAACTGCTTCCGCCAGAAGGCCGAGCAGTGTCTGGCCGCTAACACTTTCGCCGTGCCACGATCCGTGCGAGGCTGCGTACAAGCAGGAGCTCTGCTTCCTCGACGAGTCCCGCAAGTACGTTGACTCGAACATGAACTCGCTCANCGCGGCCGTCGCTGTGGAAAAGGCCGAACAGANNCCGGTATACTACACATGCTGCTCACAACTAAGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_906#0 CAGAATCGGCACGATGGCAGCAGCGAGGCAAACACACGCTAGCAAGCCAGCTTTCCGATT 60 consensus_906#1 ------------------------------------------------------------ consensus_906#0 CATCAATCAATTCTACTGCCCAAACATGAAATCGTTTCAAATCGCCACCCTAACCGTGCT 120 consensus_906#1 ------------------------------------------------------------ consensus_906#0 GCTGGTGCTGTTGGCCGGTACCGCATCGGCCAAGAAAGCGTCCACCATCTTCGGCATGCC 180 consensus_906#1 ---------------------------------------GTCCACCATCTTCGGCATGCC 21 ********************* consensus_906#0 GCTGCAGCAGGATCCAGTGCCCGCCACCTCCACCTTCATCGTGTCCGACTTTCTGCAGTT 240 consensus_906#1 GCTGCAGCAGGATCCAGTGCCCGCCACCTCCACCTTCATCGTGTCCGACTTTCTGCAGTT 81 ************************************************************ consensus_906#0 CCTGCAAACGGCCGTGACCTGCTTCAACAAGCTGCGAATCCCAGAGGAACGGTTCCCGCT 300 consensus_906#1 CCTGCAAACGGCCGTGACCTGCTTCAACAAGCTGCGAATCCCAGAGGAACGGTTCCCGCT 141 ************************************************************ consensus_906#0 CTACCTGGCCGGCGTGTTCCCGAACTGTCCGGAAACGCAATGCTTCGTGCGCTGCCTGTC 360 consensus_906#1 CTACCTGGCCGGCGTGTTCCCGAACTGTCCGGAAACGCAATGCTTCGTGCGCTGCCTGTC 201 ************************************************************ consensus_906#0 CGCCAACCTGAACCTGTACTGTGACGAAACGGGCTCGGATATCGACCGGCACTACCTGCA 420 consensus_906#1 CGCCAACCTGAACCTGTACTGTGACGAAACGGGCTCGGATATCGACCGGCACTACCTGCA 261 ************************************************************ consensus_906#0 GTACGGGCTGGGCCAGGACTACAACTGCTTCCGCCAGAAGGCCGAGCAGTGTCTGGCCGC 480 consensus_906#1 GTACGGGCTGGGCCAGGACTACAACTGCTTCCGCCAGAAGGCCGAGCAGTGTCTGGCCGC 321 ************************************************************ consensus_906#0 TAACACTT-CGCCGTGCAACGATCCGTGCGAGGCTGCGTACAAGCAGGAGCTCTGCTTCC 539 consensus_906#1 TAACACTTTCGCCGTGCCACGATCCGTGCGAGGCTGCGTACAAGCAGGAGCTCTGCTTCC 381 ******** ******** ****************************************** consensus_906#0 TCGACGAGTTCCGCAAGTACGTCGACTCGAACATGAACTCGCTCATCGCGGCCGTCGCTG 599 consensus_906#1 TCGACGAGTCCCGCAAGTACGTTGACTCGAACATGAACTCGCTCANCGCGGCCGTCGCTG 441 ********* ************ ********************** ************** consensus_906#0 TGGAAAAGGCCGAACAGAACCCGGTATACTACAACATGCTGGCTCANATCNNCTCANGTG 659 consensus_906#1 TGGAAAAGGCCGAACAGANNCCGGTATACTACA-CATGCTG-CTCAC---AACTAAGGT- 495 ****************** ************* ******* **** ** * ** consensus_906#0 ACGCACTGTCGGAACACAGGAAAATAAACTATAG 693 consensus_906#1 ---------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||