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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9107#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 988 fasta sequence
[GTGCGTGTGTGTGTGTGCGCAAAGGTTTCTCCGTTTGGACGC-TGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGG-AAGGCGCCCCGATCATTCCGATTTCCG-CCCAGCTCAAGTACAACAACACACACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTTGTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGACAGAGGCGGAAGCATCATTCATCTTTAATCGCCGGCGCCGTGAATTCAATCCCAGATGGCTTAAGTCCAGTGGACAAGTTTTATTCATCCCCGAAGGAGC]
[+] EMBL CNS08II2 [GTGCGTGTGTGTGTGTGCGCAAAGGTTTCTCCGTTTGTTCGC TGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATCTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATAGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGG AAGGCGCCCCGATCATTCCGATTTCCG CCCAGCTCAAGTACAACAACACACACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTTGTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGACAGAGG ]
[+] EMBL BM620430 [ ccgcGGACGCGTGG GTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCA ]
[+] EMBL BM576461 [ ccgCGC TGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGA ]
[+] EMBL BM596565 [ ccgATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGAT ]
[+] EMBL BM577334 [ cCGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAG ]
[+] EMBL BM617982 [ ccgGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGGAAAGGCGCCCCGATCATTCCGATTTCCGCCCCAGCTCAAGTACAACAt ]
[-] EMBL CNS08II3 [ AGATCTACAAGTGCGACAACCCGAAAATCCTCCGGCCAACGTGCTTTACGTCCGGTGGGTCGAGAAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGTTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATAGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGCACGGTGGCGG AAGGCGCCCCGATCATTCCGATTTCCG CCCAGCTCAAGTACAACAAAAAAAACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTTGTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGAGCGAAGCGGAAGCATCATTCATCTTTAATCGCCGGCGCCGTGAATTCAATCCCAGATGGCTTAAGTCCAGTGGACAAGTTTTATTCATCCCCGAAGGAGC]
consensusID : consensus_9107#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence
[CCGCTCGGCGTAAGGGTCAATCGGAGTTTTCCTCGTATTGCGCTACTCAGTGCTATCGTGTTTTTAGTCTTGCGAGGATTTGAGTGAAAGCGCTCAGCTAGCACCTGCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTTAGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATCGAGAAGGATAACGCGCAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAACCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACCTGACCAAGCGTCTGGAGCAGGTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCTACCAAGGACAGCGAGGAGAAGGACAAGCTGCTCACCTCGACCGAGGCGAACGTGGCCGCCCTGACCCGCAAGGTTCAGCAGGTTGAGGAGGATCTGGAAAAGTCTGAGGAACGTTCGTCCGCCGCGCTGTCCAAGCTGCTGGAGGCTACCCAGTCGGCTGATGAGAACAACCGTATGTGCAAAGTGTTGGAGAACCGTTCCCAGCAGGATGAGGAGCGTATGGATCAGCTGTCCAACCAGCTGAAGGAGGCGCGTATGCTCGCTGAAGACGCCGATACCAAGTCCGACGAGGTGTCCCGCAAGCTGGCCTTCGTTG]
[+] EMBL BM654363 [CCGCTCGGCGTAAGGGTCAATCGGAGTTTTCCTCGTATTGCGCTACTCAGTGCTATCGTGTTTTTAGTCTTGCGAGGATTTGAGTGAAAGCGCTCAGCTAGCACCTGCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTTAGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATCGAGAAGGATAACGCGCAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAACCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACCTGACCAAGCGTCTGGAGCAGGTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCTACCAAGGACAGCGAGGAGAAGGACAAGCTGCTCACCTCGACCGAGGCGAACGTGGCCGCCCTGACCCGCAAGGTTCAGCAGGTTGAGGAGGATCTGGAAAAGTCTGAGGAACGTTCGTCCGCCGCGCTGTCCAAGCTGCTGGAGGCTACCCAGTCGGCTGATGAGAACAACCGTATGTGCAAAGTGTTGGAGAACCGTTCCCAGCAGGATGAGGAGCGTATGGATCAGCTGTCCAACCAGCTGAAGGAGGCGCGTATGCTCGCTGAAGACGCCGATACCAAGTCCGACGAGGTGTCCCGCAAGCTGGCCTTCGTTG]
consensusID : consensus_9107#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 689 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGCAAAGGTTTCTCCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATC]
[+] EMBL BM616428 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGCAAAGGTTTCTCCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATC]
[+] EMBL BM598429 [ ccgGCGCAAAGGTTTCTCCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGACCGGTGCCGCGGTGATGGACGCCGCCCTGC TGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCC ]
[+] EMBL BM596857 [ ccgCGTTTGTTCGCTGGCTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGG ]
consensusID : consensus_9107#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 683 fasta sequence
[CCGCGGACGCGTGGGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGC]
[+] EMBL BM593602 [CCGCGGACGCGTGGGCGTGAATCAAGCCGACCAGGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGGGCAGCCCCACCTACAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGTGATATCGCGACAGGCTACTATTAACATCGGTACCATCGGCCATGTAGCGCACGGTAAATCGACAGTCGTGAAGGCCATCTCCGGTGTCCAGACGGTTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCACGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGCTGAACGGTGCCGCGGTGATGGACGCCGCCCTGCTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCGCAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTGCAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTGAAGTTCGTGCAGGGC]
[+] EMBL BM624835 [ GCCATCTCCGGTGTCCAGACGGGTCGTTTCAAGAACGAACTGGAGCGTAACATTACAATTAAACTGGGTTACGCTAACGCGAAGATTTACAAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAGGACGATAGCTTCCCGTGCTACCGGCC ]
consensusID : consensus_9107#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence
[TCGCCCCAGGNGAACGAGTCGTGTGACTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCTACATCCGCCTGTTGCTGATAAGCACAAACGAATCGAACGCGGTTTTTTGGTTATGAGTTGGACGATGATTTCGAAATTTAAAACGAACTCTTAACATAAGTGTTGTGTACGTGTGTGTGTTGTCCTAATGCTCGCGGCATTAATACTGTTTTCCACGGTTCGCACTACACTTTCATTTTGATTTTTACATCCTATCCAAACACAATATCATTTAGCTGGTAAGAGAACACACTGCTAAGAGCGCATTAACACTAACCCCCGCTATTAACGCTAATGAGATTAACCTTTTTGTTTTTATTCGTAATGTTTATTTGAACTACTATTTTCCCTGTTAGGATCGATTGCTTGTTCGATCCTATTCGAAAGGGAACTTGTGAGAGAGGGAAGATTTGTTTGTCGATGGTACCCAAAGCATTACTGCGCTTACATGCAACTTTGAAGAAGCCGAATATAACAACTGTAAAAGAGCAGTTGCAGCTAAGAAAAGCTATCCAGGAATGCAGCTTCGTGTTAACACACAGAGCCTTTTTTCCTACATCGGTCCTCCACCGATGAGA]
[+] EMBL AL933437 [TCGCCCCAGGNGAACGAGTCGTGTGACTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCTACATCCGCCTGTTGCTGATAAGCACAAACGAATCGAACGCGGTTTTTTGGTTATGAGTTGGACGATGATTTCGAAATTTAAAACGAACTCTTAACATAAGTGTTGTGTACGTGTGTGTGTTGTCCTAATGCTCGCGGCATTAATACTGTTTTCCACGGTTCGCACTACACTTTCATTTTGATTTTTACATCCTATCCAAACACAATATCATTTAGCTGGTAAGAGAACACACTGCTAAGAGCGCATTAACACTAACCCCCGCTATTAACGCTAATGAGATTAACCTTTTTGTTTTTATTCGTAATGTTTATTTGAACTACTATTTTCCCTGTTAGGATCGATTGCTTGTTCGATCCTATTCGAAAGGGAACTTGTGAGAGAGGGAAGATTTGTTTGTCGATGGTACCCAAAGCATTACTGCGCTTACATGCAACTTTGAAGAAGCCGAATATAACAACTGTAAAAGAGCAGTTGCAGCTAAGAAAAGCTATCCAGGAATGCAGCTTCGTGTTAACACACAGAGCCTTTTTTCCTACATCGGTCCTCCACCGATGAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9107#0 ------------------------GTGCGTGTGTGTGTGTGCGCAAAGGTTTCTCCGTTT 36
consensus_9107#3 ------------------------------------------------------------
consensus_9107#2 CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGCAAAGGTTTCTCCGTTT 60
consensus_9107#1 -----------------------CCGCTCGGCGTAAGGGTCAATCGGAGTTTTCCTCGTA 37
consensus_9107#4 ---------------------------------------------------TCGCCCCAG 9
consensus_9107#0 GGACGCTGG-CTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCA 95
consensus_9107#3 ---------------------------CCGCGGACGCGTGGGCGTGAATCAAGCCGACCA 33
consensus_9107#2 GTTCGCTGG-CTGTTCGATTTTGTTAATTCAGAAAAGAAACGCGTGAATCAAGCCGACCA 119
consensus_9107#1 TTGCGCTACTCAGTGCTATCGTGTTT-TTAGTCTTGCGAGGATTTGAGTGAAAGCGCTCA 96
consensus_9107#4 GNGAACGAG-TCGTGTGACTTTAACCTTCCGACTTGGGGGTGCTTCTTAAAATCCCCCCT 68
* ** * *
consensus_9107#0 GGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACGGG----GCAGCCCCACCTA 151
consensus_9107#3 GGATGTCGTCCGGTGATCAACAAATGTCCACCGCCACTACAGG----GCAGCCCCACCTA 89
consensus_9107#2 GGATGTCGTCCGGTGATCAACAAATTTCCACCGCCACTACGGG----GCAGCCCCACCTA 175
consensus_9107#1 GC-TAGCACCTGCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTT 155
consensus_9107#4 ACAT-CCGCCTGTTGCT-GATAAGCACAAACGAATCGAACGCG----GTTTTTTGGTTAT 122
* * * * ** * *
consensus_9107#0 CAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGT- 210
consensus_9107#3 CAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGT- 148
consensus_9107#2 CAGCAGCAGGACCTTTCCAAACTGGACATTACCAAGCTGACACCGCTCTCGCCGGAAGT- 234
consensus_9107#1 AGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATC 215
consensus_9107#4 GAGTTGGACGATGATTTCGAAATTTA---AAACGAACTCTTAACATAAGTGTTGTGTAC- 178
* * * * ** * * * * * * * *
consensus_9107#0 ------GATATCGCGACAGGCTACTATTAACATCGGTACCATC--GGCCATGTAG-CGCA 261
consensus_9107#3 ------GATATCGCGACAGGCTACTATTAACATCGGTACCATC--GGCCATGTAG-CGCA 199
consensus_9107#2 ------GATATCGCGACAGGCTACTATTAACATCGGTACCATC--GGCCATGTAG-CGCA 285
consensus_9107#1 GAGAAGGATAACGCG-CAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAA 274
consensus_9107#4 ---GTGTGTGTGTTGTCCTAATGCTCGCGGCATTAATACTGTT--TTCCACGGTT-CGCA 232
* * * ** * * * ** *
consensus_9107#0 CG-GTAAATCGACAG--TCGTGAAGGCCATCTCCGG--TGTCCAGACGGTTCGTTTCAAG 316
consensus_9107#3 CG-GTAAATCGACAG--TCGTGAAGGCCATCTCCGG--TGTCCAGACGGTTCGTTTCAAG 254
consensus_9107#2 CG-GTAAATCGACAG--TCGTGAAGGCCATCTCCGG--TGTCCAGACGGTTCGTTTCAAG 340
consensus_9107#1 CCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACCTGACCAAGCGTCTGGAGC--AG 332
consensus_9107#4 CT-ACACTTTCATTTTGATTTTTACATCCTATCCAA--ACACAATATCATTTAGCTGGTA 289
* * * * * ** * * *
consensus_9107#0 AACGAACTGGAGCGTAACA---TTACAATTAAACTGGGTTACGCTAACGCGAAGATTTAC 373
consensus_9107#3 AACGAACTGGAGCGTAACA---TTACAATTAAACTGGGTTACGCTAACGCGAAGATTTAC 311
consensus_9107#2 AACGAACTGGAGCGTAACA---TTACAATTAAACTGGGTTACGCTAACGCGAAGATTTAC 397
consensus_9107#1 GTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCTACCAAGGACAGCGAG 392
consensus_9107#4 AGAGAACACACTGCTAAGA---GCGCATTAACACTAACCCCCGCTATT---AACGCTAAT 343
* * * * * * **** * *
consensus_9107#0 AAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAG 433
consensus_9107#3 AAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAG 371
consensus_9107#2 AAGTGCGACAACCCGAAATGCCTCCGGCCGACGTGCTTTACGTCCGGTGGGTCGAGCAAG 457
consensus_9107#1 GAGAAGGACAAGCTG--CTCACCTCGACCGAGGCGAAC-GTGGCCGCCCTGACCCGCAAG 449
consensus_9107#4 GAGATTAACCTTTTTGTTTTTATTCGTAATGTTTATTTGAACTACTATTTTCCCTGTTAG 403
** ** * ** * * * **
consensus_9107#0 GA-CGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCA 492
consensus_9107#3 GA-CGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCA 430
consensus_9107#2 GA-CGATAGCTTCCCGTGCTACCGGCCCGCCTGCACCGGTCGCTTCCAGCTGGTGCGCCA 516
consensus_9107#1 GTTCAGCAGGTTGAGGAGGATCTGGAAAA---GTCTGAGGAACGTTCGTCCGCCGCGCTG 506
consensus_9107#4 GATCGATTGCTTGT--TCGATCCTATTCG-----AAAGGGAACTTGTGAGAGAGGGAAGA 456
* * * ** * * * * * *
consensus_9107#0 CGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGC-TGAACGGTG 551
consensus_9107#3 CGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGC-TGAACGGTG 489
consensus_9107#2 CGTGAGCTTCGTCGATTGCCCCGGGCACGACATTCTCATGGCAACCATGC-TGAACGGTG 575
consensus_9107#1 TCCAAGCT--GCTGGAGGCTACCCAGTCGGC-TGATGAGAACAACCGTATGTGCAAAGTG 563
consensus_9107#4 TTTG---TTTGTCGATGGTACCCAAAGCATTACTGCGCTTACATGCAACTTTGAAGAAGC 513
* * * * * * ** * ** *
consensus_9107#0 CCGCGGTGATGGACGCCGCCCTGCT-GCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCG 610
consensus_9107#3 CCGCGGTGATGGACGCCGCCCTGCT-GCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCG 548
consensus_9107#2 CCGCGGTGATGGACGCCGCCCTGCTTGCTGATTGCGGGCAACGAGTCCTGCCCGCAGCCG 635
consensus_9107#1 TTGGAGAACCGTTCCCAGCAGGATGAGGAGCGTATGGATCAGCTGTCCAACCAGCTGAAG 623
consensus_9107#4 CGAATATAACAACTGTAAAAGAGCA-----GTTGCAGCTAAGAAAAGCTATCCAGGAATG 568
* * * * * *
consensus_9107#0 CAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTG 670
consensus_9107#3 CAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATCATCCTG 608
consensus_9107#2 CAAACGTCCGAGCATCTGGCCGCGATCGAGATCATGAAGCTGAAGCACATCATC------ 689
consensus_9107#1 GAGGCGCGTATGC---TCGCTGAAGACGCCGATACCAAGTCCGACGAGGTGTCCCGCAAG 680
consensus_9107#4 CAGCTTCGTGT--------TAACACACAGAGCCTTTTTTCCTACATCGGTCCTCCACCGA 620
* * * *
consensus_9107#0 CAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTG 730
consensus_9107#3 CAGAACAAGATCGACCTGGTGAAGGACTCGCAGGCGAAGGAGCAGTACGATCAGATCGTG 668
consensus_9107#2 ------------------------------------------------------------
consensus_9107#1 CTGGCCTTCGTTG----------------------------------------------- 693
consensus_9107#4 TGAGA------------------------------------------------------- 625
consensus_9107#0 AAGTTCGTGCAGGGCACGGTGGCGGAAGGCGCCCCGATCATTCCGATTTCCGCCCAGCTC 790
consensus_9107#3 AAGTTCGTGCAGGGC--------------------------------------------- 683
consensus_9107#2 ------------------------------------------------------------
consensus_9107#1 ------------------------------------------------------------
consensus_9107#4 ------------------------------------------------------------
consensus_9107#0 AAGTACAACAACACACACACACGGAGAGGAGGACCGAAGGGGCGATCAAACGGGCGCCTT 850
consensus_9107#3 ------------------------------------------------------------
consensus_9107#2 ------------------------------------------------------------
consensus_9107#1 ------------------------------------------------------------
consensus_9107#4 ------------------------------------------------------------
consensus_9107#0 GTGCTGCATGACGGATTGGTTGCCGAAGAAGAGCGAGACAGAGGCGGAAGCATCATTCAT 910
consensus_9107#3 ------------------------------------------------------------
consensus_9107#2 ------------------------------------------------------------
consensus_9107#1 ------------------------------------------------------------
consensus_9107#4 ------------------------------------------------------------
consensus_9107#0 CTTTAATCGCCGGCGCCGTGAATTCAATCCCAGATGGCTTAAGTCCAGTGGACAAGTTTT 970
consensus_9107#3 ------------------------------------------------------------
consensus_9107#2 ------------------------------------------------------------
consensus_9107#1 ------------------------------------------------------------
consensus_9107#4 ------------------------------------------------------------
consensus_9107#0 ATTCATCCCCGAAGGAGC 988
consensus_9107#3 ------------------
consensus_9107#2 ------------------
consensus_9107#1 ------------------
consensus_9107#4 ------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||