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Anopheles gambiae
cluster # 9109 cluster # 9109       Sequences # 14       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9109#0 length = 1993 sequences # 11  
 consensus_9109#1 length = 675 sequences # 2  
consensus_9109#2 length = 528 sequences # 1  
consensusID : consensus_9109#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1993
fasta sequence 
                              [ACAGCCACTCGTCCTTTGCACCGCTGTCGAGTTTGCCCATTTGCTGTGCGAGTGAAAAAATAATACCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTCAAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCGTGTAAAATCGTGCTTCGCAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGCGGGTGATTTGGGAATCCGTCGCCGACCTGGCCCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCAGGAGATCATCCACATCTACCCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAACCGGGTGTGCAATGCGCTGGCCCTGCTGCAGTGTGTCGCCTCCCATCCGGAGACGCGCTCCGCCTTCCTGGCCGCCCACATTCCGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAAGACGCGCCCCTTCGAGTACCTGCGGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAAGACCGACGAACAGGAAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCATGGAGGCCGGATCGGAGCTGAGCAAAACGGTGGCCACCTTCATACTGCAGAAGATACTGCTGGACGACAGTGGGCTGTCGTACATCTGCCACACGTACGATCGGTTCTCGCACGTCGCCATCATTTTGGGCAAGATGGTGATATCGTTATCCAAGGAACCTTCGGCACGGCTGTTGAAGCATGTCGTACGCTGCTACCTGCGACTCTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCAGTGTCTGCCGGATCAGCTGCGCGACGGTACGTTCACCGCCTGTCTGCAGGAGGATAAATCTACC-AGCACTGGCTGACGATGCTGCTGAAGAACCTGGACACACCGGCCGGTCCCGTTACCGATCCGCGCCAGGTTGGCATCGCTCCGCTTACCTCGTAGAGGGCGACCGGCGATGCTGGAAATTTCATACTTCAAGGGCTGTAACCGTGCAACCAGTGCCAGCGTTGACGGCACAGGC-AACGGAAGCGGGCCGGAGGGGACCGGCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCATAAAAAAAAAAAATAAGAGGGACAAGCGATAGAAAGCTAAGACGAGCCAACCTCACT-CCCCTATTAAGATGTACAGAAATTTTTTAAGACAAAATCCCATTTGTAACGAAGCAACAAAACAGGAAACAAAAGAAAACAAATGTGTAAAGAACTCGTGTTTCGCAGCTTTCTTTGAAAGAAGGCTTTTAAAAACGACATTTAGAGACGTGAAATAATAGTGTATGTCTAAAA-AAAAAAAAATGCGTGTACATTAACTGTGAGCGATAGGGCAACAGCTGCTCAAACTCTGTTGAAGAACCAATTATTCGATTAACAAAG-AAAAACATAGGATTCAAAATTTGGT-TAAATAG-TCGAAGAAGTTAAAAGATAAACAAAAAACGAATCACGATACGCTAGTTAGATAGGTAGTGGGCGCGATGGGTAAGTTA-TTGTCCACCCTCCCCCCGAAAAACGAGAGCTTTTGTTGTTCGGC-AATT-TTTACGCACACAGACGTTAGCGAAAACTCATTCAACACTCTCTATTC-TATACCTGTTTAGTATTAAATATGCGATGAAACATACAAAAAA]

[+] EMBL CNS08LQ5             [ACAGCCACTCGTCCTTTGCACCGCTGTCGAGTTTGCCCATTTGCTGTGCGAGTGAAAAAATAATACCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTCAAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCGTGTAAAATCGTGCTTCGCAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGCGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08HYO             [   GCCACTCGTCCTTTGCACCGCTGTCGAGTTTGCCCATTTGCTGTGCGAGTGAAAAAATAATACCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTCAAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCGTGTAAAATCGTGCTTCGCAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGTGTTTTATTTGGGAATCCGTCGCCGACCTGGCCCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCAGGAGATCATCCACATCTACCCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAACCGGGTGTGCAATGCGCTGGCCCTGCTGCAGTGTGTCGCCTCCCATCCGGAGACGCGCTCCGCCTTCCTGGCCGCCCACATTCCGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAAGACGCGCCCCTTCGAGTACCTGCGGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAAGACCGACGAACAGGAAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCATGGAGGCCGGATCGGAGCTGAGCAAAACGGTGGCCACCTTCATACTGCAGAAGATACTGCTGGACGACAGTGGGCTGTCGTACATCTGCCACACGTACGATCGGTTCTCGCACGTCGCCATCATTTTGGGCAAGATGGTGATATCGTTATCCAAGGAACCTTCGGCACGGCTGTTGAAGCATGTCGTACGCTGCTACCTGCGACTGTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCAGTTTCTGCCGGATCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM612260             [                               ccgGCCCATTTGCTGTGCGAGTGAAAAAATAATATCCAACACACTGCCTTTAATTTATTTGTCGAGAGCGTTCTGTGCTGCACCAGGTGAAGCATCTGCCCGGACACTATACAATAAACCGCACTCGTTTGCTTTGCAGCTCACAAGCGTGTAAAATCGTGCTTCGCAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGAGCAAGAAGCGGGAATCCGTCGCCGACCTGGCCCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCAGGAGATCATCCACATCTACCCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAACCGGGTGTGCAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX612009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCATGGAGGCCGGATCGGAGCTGAGCAAAACGGTGGCCACCTTCATACTGCAGAAGATACTGCTGGACGACAGTGGGCTGTCGTACATCTGCCACACGTACGATCGGTTCTCGCACGTCGCCATCATTTTGGGCAAGATGGTGATATCGTTATCCAAGGAACCTTCGGCACGGCTGTTGAAGCATGTCGTACGCTGCTACCTGCGACTCTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCAGTGTCTGCCGGATCAGCTGCGCGACGGTACGTTCACCGCCTGTCTGCAGGAGGATAAATCTACC AGCACTGGCTGACGATGCTGCTGAAGAACCTGGACACACCGGCCGGTCCCGTTACCGATCCGCGCCAGGTTGGCATCGCTCCGCTTACCTCGTAGAGGGCGACCGGCGATGCTGGAAATTTCATACTTCAAGGGCTGTAACCGTGCAACCAGTGCCAGCGTTGACGTCACAGGC AACGGAAGCGGGCCGGAGGGGACCGGCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX468526             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ggcagaaTTCGGC  ACGAGGGAAATCATTCCACTGTGCCTGCGCATCATGGAGG CGGATCGGAGCTGAGCAAAACGGTGGCCACCTTCATACTGCAGAAGATACTGCTGGACGACAGTGGGCTGTCGTACATCTGCCACACGTACGATCGGTTCTCGCACGTCGCCATCATTTTGGGCAAGATGGTGATATCGTTATCCAAGGAACCTTCGGCACGGCTGTTGAAGCATGTCGTACGCTGCTACCTGCGACTCTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCAGTGTCTGCCGGATCAGCTGCGCGACGGTACGTTCACCGCCTGTCTGCAGGAGGATAAATCTACCAAGCACTGGCTGACGATGCTGCTGAAGAACCTGGACACACCGGCCGGTCCCGTTACCGATCCGCGCCAGGTTGGCATCGCTCCGCTTACCTCGTAGAGGGCGACCGGCGATGCTGGAAATTTCATACTTCAAGGGCTGTAACCGTGCAACCAGTGCCAGCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX618906             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TACATCTGCCACACGTACGATCGGTTCTCGCACGTCGCCATCATTTTGGGCAAGATGGTGATATCGTTATCCAAGGAACCTTCGGCACGGCTGTTGAAGCATGTCGTACGCTGCTACCTGCGACTCTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCAGTGTCTGCCGGATCAGCTGCGCGACGGTACGTTCACCGCCTGTCTGCAGGAGGATAAATCTACCAAGCACTGGCTGTCGATGCTGCTGAAGAACCTGGACACACCGGCCGGTCCCGTTACCGATCCGCGCCAGGTTGGCATCGCTCCGCTTACCTCGTAGAGGGCGACCGGCGATGCTGGAAATTTCATACTTCAAGGGCTGTAACCGTGCAACCAGTGCCAGCGTTGACGGCACAGGC AACGGAAGCGGGCCGGAGGGGACCGGCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM591358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccgGCATGTCGTACGCTGCTACCTGCGACTCTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCAGTGTCTGCCGGATCAGCTGCGCGACGGTACGTTCACCGCCTGTCTGCAGGAGGATAAATCTACCAAGCACTGGCTGACGATGCTGCTGAAGAACCTGGACACACCGGCCGGTCCCGTTACCGATCCGCGCCAGGTTGGCATCGCTCCGCTTACCTCGTAGAGGGCGACCGGCGATGCTGGAAATTTCATACTTCAAGGGCTGTAACCGTGCAACCAGTGCCAGCGTTGACGGCACAGGCAAACGGAAGCGGGCCGGAGGGGACCGGCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCATAAAAAAAAAAAATAAGAGGGACAAGCGATAGAAAGCTAAGACGAGCCAACCTCACTCCCCCTATTAAGATGTACAGAAATTTTTTAAGACAAAATCCCATTTGTAACGAAGCAACAAAACAGGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08HYP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCTCGTAGAGGGCGACCGGCGGTGCTGGAAATTTCATACTTCAAGGGCTGTAAGCGTGCAACCAGTGCCAGCGTTGACGGAACAGGC AACGGAAGCGGGCCAGAGGGGAGCGGCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCAT    AAAAAAAATAAGAGGGACAAGCGATAGAAAGCTAAGACGAGCCAACCTCACT CCCCTATTAAGATGTACAGAAACTTTTTAAGACAAAATCCCATTTGTAACGAAGCAACAAAACAGGAAACAAAAGAAAACAAATGTGTAAAGAACTCGTGTTTCGCAGCTTTCTTTGAAAGAAGGCTTTTAAAAACGACATTTAGAGACGTGAAATAATAGTGTATGTCTAAAATAAAAAAAAATGCGTGTACATTAACTGTGAGCGATAGGGCAACAGCTGCTCAAACTCTGTTGAAGAACCAATTATTCGATTAACAAAGAAAAAACATAGGATTCAAAATTTGGTATAAATAGCTCGAAGAAGTTAAAAGATAAACAAAAAACGAATCACGATACGCTAGTTAGATAGGTAGTGGGCCCGATGGGTGAGTTAGTTGTTCACCCTCCCCCCGGAAAACGAGAGCTTTTGTTGTTCGGCAAATTCTTTACGCACACAGACGTTAGCGAAAACTCATTCAACACTCTCTACTCATATACCTGTTTAGTATT                          ]
[-] EMBL CNS08LQ6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTTTTGTTTTGTTAATAAGCTGCTTTTTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCAT    AAAAAAAATAAGAGGGACAAGCGATAGAAAGCTAAGACGAGCCAACCTCACT CCCCTATTAAGATGTACAGAAACTTTTTAAGACAAAATCCCATTTGTAACGAAGCAACAAAACAGGAAACAAAAGAAAACAAATGTGTAAAGAACTCGTGTTTCGCAGCTTTCTTTGAAAGAAGGCTTTTAAAAACGACATTTAGAGACGTGAAATAATAG                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX622270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCATAAAAAAAAAAAATAAGAGGGACAAGCGATAGAAAGCTAAGACGAGCCAACCTCACT CCCCTATTAAGATGTACAGAAATTTTTTAAGACAAAATCCCATTTGTAACGAAGCAACAAAACAGGAAACAAAAGAAAACAAATGTGTAAAGAACTCGTGTTTCGTAGCTTTCTTTGAAAGAAGGCTTTTAAAAACGACATTTAGAGACGTGAAATAATAGTGTATGTCTGCTA CTGTATGTGTGCGTGTACGTTAACTGTGAGCGATAGGGCAACAGCTGCTCAAACTCTGTTGAAGAACCAATTATTCGATTAACAAAG AAAAACATAGGATTCAAAATTTGGT TAAATAG TCGAAGAAGTTAAAAGATAAACAAAAAACGAATCACGATACGCTAGTTAGATAGGTAGTGGGCGCGATGGGTAAGTTA TTGTCCACCCTCCCCCCGAAAAACGAGAGCTTTTGTTGTTCGGC AATT TTTACGCACACAGACGTTAGCGAAAACTCATTCAACACTCTCTATTC TATACCTGTTTAGTATTAAATATGCGATGAAACAT        ]
[-] EMBL AGA284408            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGATTCAAAATTTGGT TAAATAG TCGAAGAAGTTAAAAGATAAACAAAAAACGAATCACGATACGCTAGTTAGATAGGTAGTGGGCGCGATGGGTAAGTTA TTGTCCACCCTCCCCCCGAAAAACGAGAGCTTTTGTTGTTCGGC AATT TTTACGCACACAGACGTTAGCGAAAACTCATTCAACACTCTCTATTC TATACCTGTTTAGTATTAAATATGCGATGAAACATACAAAAAA]




>consensus_9109#0
ACAGCCACTCGTCCTTTGCACCGCTGTCGAGTTTGCCCATTTGCTGTGCGAGTGAAAAAA
TAATACCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTC
AAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCG
TGTAAAATCGTGCTTCGCAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGG
CGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCG
AGACGGCCCTGCTCGAGCTGCGGGTGATTTGGGAATCCGTCGCCGACCTGGCCCCGATGC
TGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCAGGAGATCATCCACATCTACCCGT
CCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAACCGGGTGTGCAATGCGCTGGCCC
TGCTGCAGTGTGTCGCCTCCCATCCGGAGACGCGCTCCGCCTTCCTGGCCGCCCACATTC
CGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAAGACGCGCCCCTTCGAGTACCTGC
GGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAAGACCGACGAACAGGAAGTGATCA
CGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCATGGAGGCCGGATCGG
AGCTGAGCAAAACGGTGGCCACCTTCATACTGCAGAAGATACTGCTGGACGACAGTGGGC
TGTCGTACATCTGCCACACGTACGATCGGTTCTCGCACGTCGCCATCATTTTGGGCAAGA
TGGTGATATCGTTATCCAAGGAACCTTCGGCACGGCTGTTGAAGCATGTCGTACGCTGCT
ACCTGCGACTCTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCAGTGTCTGCCGGATC
AGCTGCGCGACGGTACGTTCACCGCCTGTCTGCAGGAGGATAAATCTACCAGCACTGGCT
GACGATGCTGCTGAAGAACCTGGACACACCGGCCGGTCCCGTTACCGATCCGCGCCAGGT
TGGCATCGCTCCGCTTACCTCGTAGAGGGCGACCGGCGATGCTGGAAATTTCATACTTCA
AGGGCTGTAACCGTGCAACCAGTGCCAGCGTTGACGGCACAGGCAACGGAAGCGGGCCGG
AGGGGACCGGCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTT
TCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAG
CTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGA
TTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCATAAAAAAAAAAAA
TAAGAGGGACAAGCGATAGAAAGCTAAGACGAGCCAACCTCACTCCCCTATTAAGATGTA
CAGAAATTTTTTAAGACAAAATCCCATTTGTAACGAAGCAACAAAACAGGAAACAAAAGA
AAACAAATGTGTAAAGAACTCGTGTTTCGCAGCTTTCTTTGAAAGAAGGCTTTTAAAAAC
GACATTTAGAGACGTGAAATAATAGTGTATGTCTAAAAAAAAAAAAATGCGTGTACATTA
ACTGTGAGCGATAGGGCAACAGCTGCTCAAACTCTGTTGAAGAACCAATTATTCGATTAA
CAAAGAAAAACATAGGATTCAAAATTTGGTTAAATAGTCGAAGAAGTTAAAAGATAAACA
AAAAACGAATCACGATACGCTAGTTAGATAGGTAGTGGGCGCGATGGGTAAGTTATTGTC
CACCCTCCCCCCGAAAAACGAGAGCTTTTGTTGTTCGGCAATTTTTACGCACACAGACGT
TAGCGAAAACTCATTCAACACTCTCTATTCTATACCTGTTTAGTATTAAATATGCGATGA
AACATACAAAAAA

consensusID : consensus_9109#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 675
fasta sequence 
                              [CCGCGGACGCGTGGGTGAAAAAATAATATCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTGAAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCGTGTAAAATCGTGCTTCGGAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGAGCAAGAAGCGGGAATCCGTCGCCGACCTGGCCCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCAGGAGATCATCCACATCTACCCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAACCGGGTGTGCAATGCGCTGGCCCTGCTGCAGTGCGTCGCCTCCCATCCGGAGACGCGCTCCGCCTTCCTGGCCGCCCACATTCCGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAAGACGCGCCCCTTCGAGTACCTGCGGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAAGACCGACGAACAGGAAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCATGGAGGC]

[+] EMBL BM641084             [CCGCGGACGCGTGGGTGAAAAAATAATATCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTGAAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCGTGTAAAATCGTGCTTCGGAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGAGCAAGAAGCGGGAATCCGTCGCCGACCTGGCCCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCAGGAGATCATCCACATCTACCCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAACCGGGTGTGCAATGCGCTGGCCCTGCTGCAGTGCGTCGCCTCCCATCCGGAGACGCGCTCCGCCTTCCTGGCCGCCCACATTCCGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAAGACGCGCCCCTTCGAGTACCTGCGGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAAGACCGACGAACAGGAAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCATGGAGGC]
[+] EMBL AGA285714            [                                                                                             CCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCGTGTAAAATCGTGCTTCGGAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGAGCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGAGCAAGAAGCGGGAATCCGTCGCCGACCTGGCCCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCAGGAGATCATCCACATCTACCCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAACCGGGTGTGCAATGCGCTGGCCCTGCTGCAGTGCGTCCCCTCCCATCCGGAGAC                                                                                                                                                                                                         ]




>consensus_9109#1
CCGCGGACGCGTGGGTGAAAAAATAATATCCAACACACTGCCTTTAATTTATTTTTCGAG
AGCGTTCTGTGCTGCACCAGGTGAAGCATCTGCCCGGACACCATACAACAAACCGCACTC
GTTTGCTTTGCATCTCACAAGCGTGTAAAATCGTGCTTCGGAAATGGCTGTCGTGCAGCA
GGCTGGCAATTTGCCACCAATGGCGTCAAACTCCGAGAAGGTGTTCCAGTGGATAAACGA
GCTGTCCAATCCGGAATCGCGCGAGACGGCCCTGCTCGAGCTGAGCAAGAAGCGGGAATC
CGTCGCCGACCTGGCCCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCA
GGAGATCATCCACATCTACCCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTCGAA
CCGGGTGTGCAATGCGCTGGCCCTGCTGCAGTGCGTCGCCTCCCATCCGGAGACGCGCTC
CGCCTTCCTGGCCGCCCACATTCCGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAA
GACGCGCCCCTTCGAGTACCTGCGGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAA
GACCGACGAACAGGAAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCT
GCGCATCATGGAGGC

consensusID : consensus_9109#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 528
fasta sequence 
                              [AAATCGGCACGAGGGTCAACGATGACTGCTGAAGAACCCGGCCCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCATAAAAGAAAGAAAAATAAGAGGGACAAGCGAGTAGAAAGCTAAGACGAGCCAANCTCACTCCCCTATTAAGATGTACAGAAATTTTTTAAGACAACAATCCCATTTGTAAACGAAGGCAACAAAACAGGAAACAAAAGAGAAACAAATGTGTAAAGAACTCGCTGTTTCGTAGCTCTTCTCTTGAAAGAAGGCTTGTAANAACGACATTTAGAGACGTGAACAGTAACTAGNGTGTATGTCGTGCGTACTGTATGTGTGCGTGTACGT]

[+] EMBL BX469570             [AAATCGGCACGAGGGTCAACGATGACTGCTGAAGAACCCGGCCCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGCATAAAAGAAAGAAAAATAAGAGGGACAAGCGAGTAGAAAGCTAAGACGAGCCAANCTCACTCCCCTATTAAGATGTACAGAAATTTTTTAAGACAACAATCCCATTTGTAAACGAAGGCAACAAAACAGGAAACAAAAGAGAAACAAATGTGTAAAGAACTCGCTGTTTCGTAGCTCTTCTCTTGAAAGAAGGCTTGTAANAACGACATTTAGAGACGTGAACAGTAACTAGNGTGTATGTCGTGCGTACTGTATGTGTGCGTGTACGT]




>consensus_9109#2
AAATCGGCACGAGGGTCAACGATGACTGCTGAAGAACCCGGCCCCGCCCAACAGCTTCCA
TTGTCCGTGAGTGTGTGCGTGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAA
GCTGCCAGCTGCGTGTAAAAACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGAT
CGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAG
CGAAGCTGTAGAGCGAAGCATAAAAGAAAGAAAAATAAGAGGGACAAGCGAGTAGAAAGC
TAAGACGAGCCAANCTCACTCCCCTATTAAGATGTACAGAAATTTTTTAAGACAACAATC
CCATTTGTAAACGAAGGCAACAAAACAGGAAACAAAAGAGAAACAAATGTGTAAAGAACT
CGCTGTTTCGTAGCTCTTCTCTTGAAAGAAGGCTTGTAANAACGACATTTAGAGACGTGA
ACAGTAACTAGNGTGTATGTCGTGCGTACTGTATGTGTGCGTGTACGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9109#0      ACAGCCACTCGTCCTTTGCACCGCTGTCGAGTTTGCCCATTTGCTGTGCGAGTGAAAAAA 60
consensus_9109#1      -------------------------------------CCGCGGACGCGTGGGTGAAAAAA 23
consensus_9109#2      -------------------------------------AAATCGGCACGAGGGTCAACGAT 23
                                                                *    * * ** **  * 

consensus_9109#0      TAATACCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTC 120
consensus_9109#1      TAATATCCAACACACTGCCTTTAATTTATTTTTCGAGAGCGTTCTGTGCTGCACCAGGTG 83
consensus_9109#2      GACTGCTGAAGAACCCGGCCCCG--------CCCAACAGC-TTCCATTGTCCGT------ 68
                       * *    ** *  * * *              * * *** ***  *  * *        

consensus_9109#0      AAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCG 180
consensus_9109#1      AAGCATCTGCCCGGACACCATACAACAAACCGCACTCGTTTGCTTTGCATCTCACAAGCG 143
consensus_9109#2      GAGTGTGTGCGTGTGTATTTTTCTTTC--CCAAACCTTTTTGTTTTG---TTAATAAGCT 123
                       **  * ***  *   *   * *      **  **   **** ****    * * **** 

consensus_9109#0      TGTAAAATCGTGCTTCGCAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGG 240
consensus_9109#1      TGTAAAATCGTGCTTCGGAAATGGCTGTCGTGCAGCAGGCTGGCAATTTGCCACCAATGG 203
consensus_9109#2      GCCAGCTGCGTGT---AAAAACGGCAGC------GTCAGCTGTCCCTTTAGGATTAGTTG 174
                         *    ****      *** *** *       *   **** *  ***   *  * * *

consensus_9109#0      CGTCAAACT--CCGAGAAGGTGTTCCA-GTGGATAAACGAGCTGTCCAATCCGGA-ATCG 296
consensus_9109#1      CGTCAAACT--CCGAGAAGGTGTTCCA-GTGGATAAACGAGCTGTCCAATCCGGA-ATCG 259
consensus_9109#2      C-TCGATCGAACCGCGCTCGTGTCCCACATTACCACCCGATTTGTTCCTCCAGGCTATGG 233
                      * ** * *   *** *   **** ***  *    *  ***  *** *   * **  ** *

consensus_9109#0      CGCGAGACGGCCCTGCTCGAGCTGCGGG----TGATTTGGGAATCCGTCGCCGACCTGGC 352
consensus_9109#1      CGCGAGACGGCCCTGCTCGAGCTGAGCA----AGAAGCGGGAATCCGTCGCCGACCTGGC 315
consensus_9109#2      TGCGAAGCGAAGCTG-TAGAGCGAAGCATAAAAGAAAGAAAAATAAGAGGGACAAGCGAG 292
                       ****  **   *** * ****   *       **      ***  *  *   *   *  

consensus_9109#0      CCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCA-GGAGATCATCCACA 411
consensus_9109#1      CCCGATGCTGTGGCACAGCTTCGGCACGACGGCCGCCCTGCTGCA-GGAGATCATCCACA 374
consensus_9109#2      TAGAAAGCTAAGACGAGCCAANCTCACTCCC-CTATTAAGATGTACAGAAATTTTTTAAG 351
                          * ***  * *    *     ***  *  *      * ** *  ** **  *  *  

consensus_9109#0      TCTAC----CCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTC-GAACCGGGTGTG 466
consensus_9109#1      TCTAC----CCGTCCATCAATCCGGCCACCCTGACCGCGCACCAGTC-GAACCGGGTGTG 429
consensus_9109#2      ACAACAATCCCATTTGTAAACGAAGGCAACAAAACAGGAAACAAAAGAGAAACAAATGTG 411
                       * **    ** *   * **    * ** *   ** *   ** *    *** *   ****

consensus_9109#0      CAATGCGCTGGCCCTGCTGCAGTGTGTCGCCTCCCATCCGGAGACGCGCTCCGCCTTCCT 526
consensus_9109#1      CAATGCGCTGGCCCTGCTGCAGTGCGTCGCCTCCCATCCGGAGACGCGCTCCGCCTTCCT 489
consensus_9109#2      TAAAGAACTCGCTGTTTCGTAGC---TCTTCTCTTGAAAGAAGGCTTGTAANAACGACAT 468
                       ** *  ** **  *   * **    **  ***      * ** *  *      *  * *

consensus_9109#0      GGCCGCCCACATTCCGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAAGACGCGCCC 586
consensus_9109#1      GGCCGCCCACATTCCGCTCTTCCTGTATCCGTTCCTGCACACGACCTCCAAGACGCGCCC 549
consensus_9109#2      TTAGAGACGTGAACAGTAACTAGNGTGTATGT-CGTGCGTACTGTATGTGTG-CGTGTAC 526
                             *     * *    *   ** *  ** * ***  **    *    * ** *  *

consensus_9109#0      CTTCGAGTACCTGCGGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAAGACCGACGA 646
consensus_9109#1      CTTCGAGTACCTGCGGCTGACGTCGCTCGGTGTCATCGGTGCGCTGGTGAAGACCGACGA 609
consensus_9109#2      GT---------------------------------------------------------- 528
                       *                                                          

consensus_9109#0      ACAGGAAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCAT 706
consensus_9109#1      ACAGGAAGTGATCACGTTTCTGCTGACGACGGAAATCATTCCACTGTGCCTGCGCATCAT 669
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      GGAGGCCGGATCGGAGCTGAGCAAAACGGTGGCCACCTTCATACTGCAGAAGATACTGCT 766
consensus_9109#1      GGAGGC------------------------------------------------------ 675
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      GGACGACAGTGGGCTGTCGTACATCTGCCACACGTACGATCGGTTCTCGCACGTCGCCAT 826
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      CATTTTGGGCAAGATGGTGATATCGTTATCCAAGGAACCTTCGGCACGGCTGTTGAAGCA 886
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      TGTCGTACGCTGCTACCTGCGACTCTCGGACAATCCACGCGCCCGAGAAGCGTTACGCCA 946
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      GTGTCTGCCGGATCAGCTGCGCGACGGTACGTTCACCGCCTGTCTGCAGGAGGATAAATC 1006
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      TACCAGCACTGGCTGACGATGCTGCTGAAGAACCTGGACACACCGGCCGGTCCCGTTACC 1066
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      GATCCGCGCCAGGTTGGCATCGCTCCGCTTACCTCGTAGAGGGCGACCGGCGATGCTGGA 1126
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      AATTTCATACTTCAAGGGCTGTAACCGTGCAACCAGTGCCAGCGTTGACGGCACAGGCAA 1186
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      CGGAAGCGGGCCGGAGGGGACCGGCCGCCCAACAGCTTCCATTGTCCGTGAGTGTGTGCG 1246
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      TGTGTATTTTTCTTTCCCAAACCTTTTTGTTTTGTTAATAAGCTGCCAGCTGCGTGTAAA 1306
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      AACGGCAGCGTCAGCTGTCCCTTTAGGATTAGTTGCTCGATCGAACCGCGCTCGTGTCCC 1366
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      ACATTACCACCCGATTTGTTCCTCCAGGCTATGGTGCGAAGCGAAGCTGTAGAGCGAAGC 1426
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      ATAAAAAAAAAAAATAAGAGGGACAAGCGATAGAAAGCTAAGACGAGCCAACCTCACTCC 1486
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      CCTATTAAGATGTACAGAAATTTTTTAAGACAAAATCCCATTTGTAACGAAGCAACAAAA 1546
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      CAGGAAACAAAAGAAAACAAATGTGTAAAGAACTCGTGTTTCGCAGCTTTCTTTGAAAGA 1606
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      AGGCTTTTAAAAACGACATTTAGAGACGTGAAATAATAGTGTATGTCTAAAAAAAAAAAA 1666
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      ATGCGTGTACATTAACTGTGAGCGATAGGGCAACAGCTGCTCAAACTCTGTTGAAGAACC 1726
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      AATTATTCGATTAACAAAGAAAAACATAGGATTCAAAATTTGGTTAAATAGTCGAAGAAG 1786
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      TTAAAAGATAAACAAAAAACGAATCACGATACGCTAGTTAGATAGGTAGTGGGCGCGATG 1846
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      GGTAAGTTATTGTCCACCCTCCCCCCGAAAAACGAGAGCTTTTGTTGTTCGGCAATTTTT 1906
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      ACGCACACAGACGTTAGCGAAAACTCATTCAACACTCTCTATTCTATACCTGTTTAGTAT 1966
consensus_9109#1      ------------------------------------------------------------
consensus_9109#2      ------------------------------------------------------------
                                                                                  

consensus_9109#0      TAAATATGCGATGAAACATACAAAAAA 1993
consensus_9109#1      ---------------------------
consensus_9109#2      ---------------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)