These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_911#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 227 fasta sequence [GTCGCGTGCCCGCTTGTTCCGTTAATTTTTATGCTGCTGGTTGTGGGGCGGTTGCGCCGCTTCCGCCTGTTTGTGGTGCGTCGTGCGTTTGGTCCTGGCATGCTTGTTCTCCAGCACGTGCATGTTTTGGTCTCTGGTCGTCGTCGTTTGTGGGCAGTGTTCTGTTTCCATGGGTGCTGGTGCTTGCTTGTGCTGGGTGGCCGGTGGCTGCGCCATTGCGGCATATG] [+] EMBL CNS090D0 [GTCGCGTGCCCGCTTGTTCCGTTAATTTTTATGCTGCTGGTTGTGGGGCGGTTGCGCCGCTTCCGCCTGTTTGTGGTGCGTCGTGCGTTTGGTCCTGGCATGCTTGTTCTCCAGCACGTGCATGTTTTGGTCTCTGGTCGTCGTCGTTTGTGGGCAGTGTTCTGTTTCCATGGGTGCTGGTGCTTGCTTGTGCTGGGTGGCCGGTGGCTGCGCCATTGCGGCATATG] consensusID : consensus_911#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 127 fasta sequence [TAAGCTGCTGGTTGTGGGGCGGTTGCGGCGCTTCCGCCTGTTTGTGGTGCGTCGTGCGATTGGTCCTGGCAATGTTTGTTCTCCCGCACGTGCAAGTTTTGGTCTCTGGTCGTCGTCGATTGTGAGC] [+] EMBL CNS08JYG [TAAGCTGCTGGTTGTGGGGCGGTTGCGGCGCTTCCGCCTGTTTGTGGTGCGTCGTGCGATTGGTCCTGGCAATGTTTGTTCTCCCGCACGTGCAAGTTTTGGTCTCTGGTCGTCGTCGATTGTGAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_911#0 GTCGCGTGCCCGCTTGTTCCGTTAATTTTTATGCTGCTGGTTGTGGGGCGGTTGCGCCGC 60 consensus_911#1 -----------------------------TAAGCTGCTGGTTGTGGGGCGGTTGCGGCGC 31 ** ************************ *** consensus_911#0 TTCCGCCTGTTTGTGGTGCGTCGTGCGTTTGGTCCTGGCA-TGCTTGTTCTCCAGCACGT 119 consensus_911#1 TTCCGCCTGTTTGTGGTGCGTCGTGCGATTGGTCCTGGCAATGTTTGTTCTCCCGCACGT 91 *************************** ************ ** ********* ****** consensus_911#0 GCATGTTTTGGTCTCTGGTCGTCGTCGTTTGTGGGCAGTGTTCTGTTTCCATGGGTGCTG 179 consensus_911#1 GCAAGTTTTGGTCTCTGGTCGTCGTCGATTGTGAGC------------------------ 127 *** *********************** ***** ** consensus_911#0 GTGCTTGCTTGTGCTGGGTGGCCGGTGGCTGCGCCATTGCGGCATATG 227 consensus_911#1 ------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||