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Anopheles gambiae
cluster # 9121 cluster # 9121       Sequences # 14       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9121#0 length = 785 sequences # 4  
consensus_9121#1 length = 718 sequences # 1  
consensus_9121#2 length = 628 sequences # 1  
consensus_9121#3 length = 557 sequences # 1  
consensus_9121#4 length = 549 sequences # 1  
consensus_9121#5 length = 368 sequences # 5  
consensus_9121#6 length = 209 sequences # 1  

consensusID : consensus_9121#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 785
fasta sequence
                              [CCAGGCTTTAATTGAGGACTACACAAGGGCTTCAAGAAGACCGATTAGCACCCGG-CAGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTC-GACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGA-GGCCCAGTACAAGGAGATGGAG-GGCAAGGTGTCGACCACGCTGTCCGGGCTGGAG-GGTGAGCTGAAGGGCAAGTTCTACCCGCTGACCGGCATGGACAAGGCC-GTCCAGCAGCAGCTGATCGACGATCACTTCCTGTTCAAGG-AGGGCGACCGTTTCCTGCAGGCCGCGAACGCGTGCCGCTACTGGCCGT-CCGGTCGCGGTATCTACCACAACGACAACAAGACCTTCCTGGTCTGGTGCAACGAGGAGGACCATCTGCGCATCATCTCGATGCAGAT-GGGTGGCGATCTCGGCCAGGTCTACCGCCGTCTGGTGACCG-CGTCAACGACATCGAGAAGCGCATCCCGTTCTCGCACCAGACGTCTCGGTTCCTGACCTTCTGCCCGACAACCTTGGACCACATCCGGCTCGGTCCACATCAAGGTGNCGAAGNCTGGCCAAGGGACTTAACGCGAAAGGCTGGAGGCGACGGCGACAAGTAACAACCTGACAGGGTGCGCGGTAACCCGGGTGAGCACTCCGAGGACGAGGGCGGCATCTANGACAATCTTCAAAAAGGCCGCATGGGAATGACCGAAGCGGGCGAAGGTTTTCCCTTAGTGAGGT]

[+] EMBL AL697448             [CCAGGCTTTAATTGAGGACTACACAAGGGCTTCAAGAAGACCGATTAGCACCCGG CAGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTCTGACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTACGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGA GGCCCAGTACAAGGAGATGGAGTGGCAAGGTGTCGACCACGCTGTCCGGGCTGGAGNGGTGAGCTGAAGGGCAAGTTCTACCCGCTGACCGGTATGGACAAGGCCTGTCCAGCAGCAGCTGATCGACGATCACTTCCTGTTCAAGGCAGGGCGACCGTTTCCTGCAGGCCGCGAACGCGTGCCGCTACTGGCCGTACCGGTCGCGGTATCTACCACAACGACAACAAGACCTTCCTGGTCTGGTGCAACGAGGAGGACCATCTGCGCATCATCTCGATGCA AT GGGTGGCGATCTCGGCCAGGTCTACCGCCGTCTGGTGACCG CGTCAACGACATCGAGAAGCGCATCCCGTTCTCGCACCAGACGTCTCGGTTCCTGACCTTCTGCCCGACAACCTTGGACCACATCCGGCTCGGTCCACATCAAGGTGNCGAAGNCTGGCCAAGGGACTTAACGCGAAAGGCTGGAGGCGACGGCGACAAGTAACAACCTGACAGGGTGCGCGGTAACCCGGGTGAGCACTCCGAGGACGAGGGCGGCATCTANGACAATCTTCAAAAAGGCCGCATGGGAATGACCGAAGCGGGCGAAGGTTTTCCCTTAGTGAGGT]
[+] EMBL BM638461             [                                              AGCACCCGGCCAGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTC GACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGA GGCCCAGTACAAGGAGATGGAG GGCAAGGTGTCGACCACGCTGTCCGGGCTGGAG GGTGAGCTGAAGGGCAAGTTCTACCCGCTGACCGGCATGGACAAGGCC GTCCAGCAGCAGCTGATCGACGATCACTTCCTGTTCAAGG AGGGCGACCGTTTCCTGCAGGCCGCGAACGCGTGCCGCTACTGGCCGT CCGGTCGCGGTATCTACCACAACGACAACAAGACCTTCCTGGTCTGGTGCAACGAGGAGGACCATCTGCGCATCATCTCGATGCAGATGGGGTGGCGATCTCGG                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM644604             [                                                      c cgGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTC GACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGA GGCCCAGTACAAGGAGATGGAG GGCAAGGTGTCGACCACGCTGTCCGGGCTGGAG GGTGAGCTGAAGGGCAAGTTCTACCCGCTGACCGGCATGGACAAGGCC GTCCAGCAGCAGCTGATCGACGATCACTTCCTGTTCAAGG AGGGCGACCGTTTCCTGCAGGCCGCGAACGCGTGCCGCTACTGGCCGT CCGGTCGCGGTATCTACCACAACGACAACAAGACCTTCCTGGTCTGGTGCAACGAGGAGGACCATCTGCGCATCATCTCGATGCAGAT GGGTGGCGATCTCGGCCAGGTCTACCGCCGTCTGGTGACCGCCGTCAACGAC                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08N5S             [                                                                                                 CCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGAGGGCCCAGTACAAGGAGATGGAG GGCAAGGTGTCGACCACGCTGTCCGGGCTGGAG GGTGAGCTGAAGGGCAAGTTCTACCCGCTGACCGGCATGGACAAGGCC GTCCAGCAGCAGCTGATCGACGATCACTTCCTGTTCAAGG AGGGCGACCGTTTCCTGCAGGCCGCGAACGC TGCCGCTACTGGCCGT CCGGTCGCGGTATCTACCACAACGACAACAACACCTTCCTGGTCTGGTG                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_9121#0 CCAGGCTTTAATTGAGGACTACACAAGGGCTTCAAGAAGACCGATTAGCACCCGGCAGTG ACTTCGGTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTCGA CCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGAGG CCCAGTACAAGGAGATGGAGGGCAAGGTGTCGACCACGCTGTCCGGGCTGGAGGGTGAGC TGAAGGGCAAGTTCTACCCGCTGACCGGCATGGACAAGGCCGTCCAGCAGCAGCTGATCG ACGATCACTTCCTGTTCAAGGAGGGCGACCGTTTCCTGCAGGCCGCGAACGCGTGCCGCT ACTGGCCGTCCGGTCGCGGTATCTACCACAACGACAACAAGACCTTCCTGGTCTGGTGCA ACGAGGAGGACCATCTGCGCATCATCTCGATGCAGATGGGTGGCGATCTCGGCCAGGTCT ACCGCCGTCTGGTGACCGCGTCAACGACATCGAGAAGCGCATCCCGTTCTCGCACCAGAC GTCTCGGTTCCTGACCTTCTGCCCGACAACCTTGGACCACATCCGGCTCGGTCCACATCA AGGTGNCGAAGNCTGGCCAAGGGACTTAACGCGAAAGGCTGGAGGCGACGGCGACAAGTA ACAACCTGACAGGGTGCGCGGTAACCCGGGTGAGCACTCCGAGGACGAGGGCGGCATCTA NGACAATCTTCAAAAAGGCCGCATGGGAATGACCGAAGCGGGCGAAGGTTTTCCCTTAGT GAGGT



consensusID : consensus_9121#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 718
fasta sequence
                              [CTCATGCAGAATTCCCTGAGGTTTAACTCCGCACAATCAGTATACGTGCATTATCGACGGTACTGCTGCTAGCGGGACTAGTGGCCTGTGTTGCCGGGCTGCTGACGGACGATGCCTGCCCACAGGATGTGACGGCGATGAGTGGCTTTTCGCTGAACGATTACGCCGGCGTGGTACGAGATCAAGCGGTACGAGCAGTTCTACGAGAAGGATCTGGACTGGTGGTGGGCGAGTATCAGAAGAAGGGGCGAAACAAGATCTCGGTGAAAGAAATGGTNGCCTTCAGGCCTGGCGAAACAATACGCGCGTGGTGGGCGGACACGTGTAACNGGGCGTGGTTATCCTACCCGGGACGAGCGCCGGACCATCCGGGCCAAAGCTGAGCGTCCGCTGTCTCTTTTCCGGGACGCACACAGTGNCCGCATCGTAGCAAACTACTTGGGGTGCATANGACCAACAGGACATAAAANCCTCGGAGTTCCGCCGACACGTCNTTGGTTCCCTGTGATGCACCGTATACCATTTNCCGGGAGTCCACATCCCAAAAGAATTGTACATCGGNCTATCACTANGANAATTATTTCTCTGCCGCAACCCCAAAAAACCATTATCCCCGCAACCGGAAGAAAAAACNCAGTAGTANTAAAGACACNACTGTATGGCAAACAAGACATGNGGTTACAAAAGNAAGTAACAGCCCGGANCACAGATCCAAAGT]

[+] EMBL AL696148             [CTCATGCAGAATTCCCTGAGGTTTAACTCCGCACAATCAGTATACGTGCATTATCGACGGTACTGCTGCTAGCGGGACTAGTGGCCTGTGTTGCCGGGCTGCTGACGGACGATGCCTGCCCACAGGATGTGACGGCGATGAGTGGCTTTTCGCTGAACGATTACGCCGGCGTGGTACGAGATCAAGCGGTACGAGCAGTTCTACGAGAAGGATCTGGACTGGTGGTGGGCGAGTATCAGAAGAAGGGGCGAAACAAGATCTCGGTGAAAGAAATGGTNGCCTTCAGGCCTGGCGAAACAATACGCGCGTGGTGGGCGGACACGTGTAACNGGGCGTGGTTATCCTACCCGGGACGAGCGCCGGACCATCCGGGCCAAAGCTGAGCGTCCGCTGTCTCTTTTCCGGGACGCACACAGTGNCCGCATCGTAGCAAACTACTTGGGGTGCATANGACCAACAGGACATAAAANCCTCGGAGTTCCGCCGACACGTCNTTGGTTCCCTGTGATGCACCGTATACCATTTNCCGGGAGTCCACATCCCAAAAGAATTGTACATCGGNCTATCACTANGANAATTATTTCTCTGCCGCAACCCCAAAAAACCATTATCCCCGCAACCGGAAGAAAAAACNCAGTAGTANTAAAGACACNACTGTATGGCAAACAAGACATGNGGTTACAAAAGNAAGTAACAGCCCGGANCACAGATCCAAAGT]


>consensus_9121#1 CTCATGCAGAATTCCCTGAGGTTTAACTCCGCACAATCAGTATACGTGCATTATCGACGG TACTGCTGCTAGCGGGACTAGTGGCCTGTGTTGCCGGGCTGCTGACGGACGATGCCTGCC CACAGGATGTGACGGCGATGAGTGGCTTTTCGCTGAACGATTACGCCGGCGTGGTACGAG ATCAAGCGGTACGAGCAGTTCTACGAGAAGGATCTGGACTGGTGGTGGGCGAGTATCAGA AGAAGGGGCGAAACAAGATCTCGGTGAAAGAAATGGTNGCCTTCAGGCCTGGCGAAACAA TACGCGCGTGGTGGGCGGACACGTGTAACNGGGCGTGGTTATCCTACCCGGGACGAGCGC CGGACCATCCGGGCCAAAGCTGAGCGTCCGCTGTCTCTTTTCCGGGACGCACACAGTGNC CGCATCGTAGCAAACTACTTGGGGTGCATANGACCAACAGGACATAAAANCCTCGGAGTT CCGCCGACACGTCNTTGGTTCCCTGTGATGCACCGTATACCATTTNCCGGGAGTCCACAT CCCAAAAGAATTGTACATCGGNCTATCACTANGANAATTATTTCTCTGCCGCAACCCCAA AAAACCATTATCCCCGCAACCGGAAGAAAAAACNCAGTAGTANTAAAGACACNACTGTAT GGCAAACAAGACATGNGGTTACAAAAGNAAGTAACAGCCCGGANCACAGATCCAAAGT



consensusID : consensus_9121#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 628
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGAGCCGTAGTTCCCGCCCTTTTCGCTCGCACCGTCCGGCCCGTGAGCGAGTGTGCCTTCGACGCCTTTTCCGTCCAGCGAAGTTCACCAATCCGTGCCCAGCTCGAGCTATTCGAGGTGAACTTCCTTTTTTTCCAAGCGTTCGAGTTGCTCGTGAAAATGCAGTGAAATTGCAGGGCCCCAGTGTTCGCTCAGTGTCCCTGTTCGTGCTCCTAGAAGTAATCCCCGGAAGTTCGTCTGAAGTCTGACCGTTTCGTATAGACACAGACTATACTGCTAAGAGTTTCACCGTCACCGACCTCCGTTACTACTGTGTTCCTTATTTACAAATCGTACCAAACGTCCGTCCCGGAGTCGTGCAGAATGATGAGCTTCCTAAGGATGTTTGACCGCACCGGAAAGGTGTTGCGCGCCGTCCAGCAGCGTCACTTTTCCATCGTGGGCAGCCCGAGCGTCAGTGCGTACCTTATGCAGCAGGCAAGAAAGGCGAAAAACGTTAACCGCACCCTGCACGGTCTGCACGAGCGCAAGCAGGCGACATTCAGCGAGCGCAACCAGCTAAAGTACGCCCGGGCGGCTTGGTTGGTGAAAGTGGGGCAGTGC]

[+] EMBL BM601617             [CCGCCCACGCGTCCGCCCACGCGTCCGAGCCGTAGTTCCCGCCCTTTTCGCTCGCACCGTCCGGCCCGTGAGCGAGTGTGCCTTCGACGCCTTTTCCGTCCAGCGAAGTTCACCAATCCGTGCCCAGCTCGAGCTATTCGAGGTGAACTTCCTTTTTTTCCAAGCGTTCGAGTTGCTCGTGAAAATGCAGTGAAATTGCAGGGCCCCAGTGTTCGCTCAGTGTCCCTGTTCGTGCTCCTAGAAGTAATCCCCGGAAGTTCGTCTGAAGTCTGACCGTTTCGTATAGACACAGACTATACTGCTAAGAGTTTCACCGTCACCGACCTCCGTTACTACTGTGTTCCTTATTTACAAATCGTACCAAACGTCCGTCCCGGAGTCGTGCAGAATGATGAGCTTCCTAAGGATGTTTGACCGCACCGGAAAGGTGTTGCGCGCCGTCCAGCAGCGTCACTTTTCCATCGTGGGCAGCCCGAGCGTCAGTGCGTACCTTATGCAGCAGGCAAGAAAGGCGAAAAACGTTAACCGCACCCTGCACGGTCTGCACGAGCGCAAGCAGGCGACATTCAGCGAGCGCAACCAGCTAAAGTACGCCCGGGCGGCTTGGTTGGTGAAAGTGGGGCAGTGC]


>consensus_9121#2 CCGCCCACGCGTCCGCCCACGCGTCCGAGCCGTAGTTCCCGCCCTTTTCGCTCGCACCGT CCGGCCCGTGAGCGAGTGTGCCTTCGACGCCTTTTCCGTCCAGCGAAGTTCACCAATCCG TGCCCAGCTCGAGCTATTCGAGGTGAACTTCCTTTTTTTCCAAGCGTTCGAGTTGCTCGT GAAAATGCAGTGAAATTGCAGGGCCCCAGTGTTCGCTCAGTGTCCCTGTTCGTGCTCCTA GAAGTAATCCCCGGAAGTTCGTCTGAAGTCTGACCGTTTCGTATAGACACAGACTATACT GCTAAGAGTTTCACCGTCACCGACCTCCGTTACTACTGTGTTCCTTATTTACAAATCGTA CCAAACGTCCGTCCCGGAGTCGTGCAGAATGATGAGCTTCCTAAGGATGTTTGACCGCAC CGGAAAGGTGTTGCGCGCCGTCCAGCAGCGTCACTTTTCCATCGTGGGCAGCCCGAGCGT CAGTGCGTACCTTATGCAGCAGGCAAGAAAGGCGAAAAACGTTAACCGCACCCTGCACGG TCTGCACGAGCGCAAGCAGGCGACATTCAGCGAGCGCAACCAGCTAAAGTACGCCCGGGC GGCTTGGTTGGTGAAAGTGGGGCAGTGC



consensusID : consensus_9121#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 557
fasta sequence
                              [GCAATTCGCGCTGTTGGCCCGGAATCGGTTGTTATTAGTCTTGCGCTGATTGATAAAAGCAGGTTGATTTTATCGCACGATGTAGGCACTTTACGCAATCGCCTTTTTGCAGACCGGATTTCGGGGGTTGTTTTTCCGGCACATCACTCTTCGGGCTGCTCCTCGATGGGCTCCTGGATAGGTTCGTCGCAAGCGCCACGGCGCAACACTCGCAGCTCGATCGACCGTGCCGCCATTTCCTCCGCCTTGCAGTCCAGCATGCAGCGGTTAGCGGGCGTGCTCAGATCCGTACCACAGACGGGGTCGTATATGCGGGGACAGGCGCAAGCACCATCCTTCGAGCGTCTGGCGTAGACACTTTCACCGCCCAGCAGAACTATCGCGGCCAGCAGCACCACCACTAAACTCCAGGAACGCATCTTAATTAGCTCGTTTAGCAACGGACAGATGATCCTAACAGAAAGTCACACGTTTACGGAATCAGGGAAAAACACACAAGTACAACTATTTCGTCAGCTGTAGCAGAAATCGCACAAAGCAATCCAGTAGGCCAACAG]

[+] EMBL CNS08E4Y             [GCAATTCGCGCTGTTGGCCCGGAATCGGTTGTTATTAGTCTTGCGCTGATTGATAAAAGCAGGTTGATTTTATCGCACGATGTAGGCACTTTACGCAATCGCCTTTTTGCAGACCGGATTTCGGGGGTTGTTTTTCCGGCACATCACTCTTCGGGCTGCTCCTCGATGGGCTCCTGGATAGGTTCGTCGCAAGCGCCACGGCGCAACACTCGCAGCTCGATCGACCGTGCCGCCATTTCCTCCGCCTTGCAGTCCAGCATGCAGCGGTTAGCGGGCGTGCTCAGATCCGTACCACAGACGGGGTCGTATATGCGGGGACAGGCGCAAGCACCATCCTTCGAGCGTCTGGCGTAGACACTTTCACCGCCCAGCAGAACTATCGCGGCCAGCAGCACCACCACTAAACTCCAGGAACGCATCTTAATTAGCTCGTTTAGCAACGGACAGATGATCCTAACAGAAAGTCACACGTTTACGGAATCAGGGAAAAACACACAAGTACAACTATTTCGTCAGCTGTAGCAGAAATCGCACAAAGCAATCCAGTAGGCCAACAG]


>consensus_9121#3 GCAATTCGCGCTGTTGGCCCGGAATCGGTTGTTATTAGTCTTGCGCTGATTGATAAAAGC AGGTTGATTTTATCGCACGATGTAGGCACTTTACGCAATCGCCTTTTTGCAGACCGGATT TCGGGGGTTGTTTTTCCGGCACATCACTCTTCGGGCTGCTCCTCGATGGGCTCCTGGATA GGTTCGTCGCAAGCGCCACGGCGCAACACTCGCAGCTCGATCGACCGTGCCGCCATTTCC TCCGCCTTGCAGTCCAGCATGCAGCGGTTAGCGGGCGTGCTCAGATCCGTACCACAGACG GGGTCGTATATGCGGGGACAGGCGCAAGCACCATCCTTCGAGCGTCTGGCGTAGACACTT TCACCGCCCAGCAGAACTATCGCGGCCAGCAGCACCACCACTAAACTCCAGGAACGCATC TTAATTAGCTCGTTTAGCAACGGACAGATGATCCTAACAGAAAGTCACACGTTTACGGAA TCAGGGAAAAACACACAAGTACAACTATTTCGTCAGCTGTAGCAGAAATCGCACAAAGCA ATCCAGTAGGCCAACAG



consensusID : consensus_9121#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 549
fasta sequence
                              [TCCATGCAGATCCCGAGGTTATCTTCGGGCATCTGGTGCCGGCACAACTGGGCAAAGGACACTACACCGAGGGTGCTGAGCTGGTCGATGCCGTGTTGGATGTGGTGCGCAAGGAGTGCGAGAACTGCGACTGTCTGCAGGGATTCCAACTGACGCACTCACTGGGAGGTGGTACCGGTTCGGGTATGGGCACGCTGCTGATCTCGAAAATCCGCGAAGAGTATCCGGATCGTATCATGAACACCTACTCGGTTTGTACCGGCGCCGCAAAGTGTCGGACACGGTGGTTGAGCCGTACAATTGCTAACCTCTCGATCCATCAGCTGGTGGAGAACACGGACCGAGCACGGTACTGGTATCGAATAACGAGGCCTTGTACCGATATCTGNTNACCGGAAACGCTTGAANGGTTGCCCAAATTCCGGAAGCCTNACGGGCGATCTATTGAAGCCATTCTTCGGGTTATCGGTTGACCGGAATTGGTTCCCGGTGTTGAACCAACCTTGTTCTGCGGAATTACCCCGGNGAACAGCTTGAAATGCCGGAATA]

[+] EMBL AL695163             [TCCATGCAGATCCCGAGGTTATCTTCGGGCATCTGGTGCCGGCACAACTGGGCAAAGGACACTACACCGAGGGTGCTGAGCTGGTCGATGCCGTGTTGGATGTGGTGCGCAAGGAGTGCGAGAACTGCGACTGTCTGCAGGGATTCCAACTGACGCACTCACTGGGAGGTGGTACCGGTTCGGGTATGGGCACGCTGCTGATCTCGAAAATCCGCGAAGAGTATCCGGATCGTATCATGAACACCTACTCGGTTTGTACCGGCGCCGCAAAGTGTCGGACACGGTGGTTGAGCCGTACAATTGCTAACCTCTCGATCCATCAGCTGGTGGAGAACACGGACCGAGCACGGTACTGGTATCGAATAACGAGGCCTTGTACCGATATCTGNTNACCGGAAACGCTTGAANGGTTGCCCAAATTCCGGAAGCCTNACGGGCGATCTATTGAAGCCATTCTTCGGGTTATCGGTTGACCGGAATTGGTTCCCGGTGTTGAACCAACCTTGTTCTGCGGAATTACCCCGGNGAACAGCTTGAAATGCCGGAATA]


>consensus_9121#4 TCCATGCAGATCCCGAGGTTATCTTCGGGCATCTGGTGCCGGCACAACTGGGCAAAGGAC ACTACACCGAGGGTGCTGAGCTGGTCGATGCCGTGTTGGATGTGGTGCGCAAGGAGTGCG AGAACTGCGACTGTCTGCAGGGATTCCAACTGACGCACTCACTGGGAGGTGGTACCGGTT CGGGTATGGGCACGCTGCTGATCTCGAAAATCCGCGAAGAGTATCCGGATCGTATCATGA ACACCTACTCGGTTTGTACCGGCGCCGCAAAGTGTCGGACACGGTGGTTGAGCCGTACAA TTGCTAACCTCTCGATCCATCAGCTGGTGGAGAACACGGACCGAGCACGGTACTGGTATC GAATAACGAGGCCTTGTACCGATATCTGNTNACCGGAAACGCTTGAANGGTTGCCCAAAT TCCGGAAGCCTNACGGGCGATCTATTGAAGCCATTCTTCGGGTTATCGGTTGACCGGAAT TGGTTCCCGGTGTTGAACCAACCTTGTTCTGCGGAATTACCCCGGNGAACAGCTTGAAAT GCCGGAATA



consensusID : consensus_9121#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 368
fasta sequence
                              [CCGCCCACGCGTCCTCGACTCTGCTGGACTGCGTCCAGTCTGGTTTCGAGAACCCAGACTCCGGCGTCGGCATCTACGCCCCGGACGCTGAGGCGTACTCCCTGTTCGCTGATTTGTTCGACCCGATCATCGAGGACTACCACAAGGGCTTCAAGAAGACCGACAAGCACCCGGCCAGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGAGGCCCAGTACAAGGAGATGGAGGGCAAGGTGTCGACCACGCTGTCCGGGCTGGAGGGTGAGCTGAAGGGC]

[+] EMBL BM618278             [CCGCCCACGCGTCCGCGACTCTGCTGGACTGCGTCCAGTCTGGTTTCGAGAACCCAGACTCCGGCGTCGGCATCTACGCCCCGGACGCTGAGGCGTACTCCCTGTTCGCTGATTTGTTCGACCCGATCATCGAGGACTACCACAAGGGCTTCAAGAAGACCGACAAGCACCCGGCCAGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGAGGCCCAGTACAAGGAGATGGAGGGCAA                                           ]
[+] EMBL BM642106             [             CTCGACTCTGCTGGACTGCGTCCAGTCTGGTTTCGAGAACCCAGACTCCGGCGTCGGCATCTACGCCCCGGACGCTGAGGCGTACTCCCTGTTCGCTGATTTGTTCGACCCGATCATCGAGGACTACCACAAGGGCTTCAAGAAGACCGACAAGCACCCGGCCAGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGAGGCCCAGTACAAGGAGATGGAGGGCAAGGTGTCGACCACGCTGTCCGGGCTGGAGGGTGAGCTGAAGGGC]
[+] EMBL CNS08XQF             [           ggCTCGACTCTGCTGGACTGCGTCCAGTCTGGTTTCGAGAACCCAGACTCCGGCGTCGGCATCTACGCCCCGGACGCTGAGGCGTACTCCCTGTTCGCTGATTTGTTCGACCCGATCATCGAGGACTACCACAAGGGCTTCAAGAAGACCGACAAGCACCCGGCCAGTGACTTCGGTGATGTGAACGCCTTCGGCAACTTCGACCCGACCGGCGAGTTCGTCGT                                                                                                                                     ]
[+] EMBL CNS08ITN             [                                              CGAGAACCCAGACTCCGGCGTCGGCATCTACGCCCCGGACGCTGAGGCGTACTCCCTGTTCGCTGATTTGTTCGACCCGATCATCGAGGA                                                                                                                                                                                                                                        ]
[+] EMBL CNS08XFG             [                                                                                                                                                                           CGGCCAGTGACTTCGGTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTCGACCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGAGGCC                                                                  ]


>consensus_9121#5 CCGCCCACGCGTCCTCGACTCTGCTGGACTGCGTCCAGTCTGGTTTCGAGAACCCAGACT CCGGCGTCGGCATCTACGCCCCGGACGCTGAGGCGTACTCCCTGTTCGCTGATTTGTTCG ACCCGATCATCGAGGACTACCACAAGGGCTTCAAGAAGACCGACAAGCACCCGGCCAGTG ACTTCGGTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTCGA CCCGCGTCCGTTGCGGTCGCTCGATGGAGGGCTACCCGTTCAACCCCTGCCTGACCGAGG CCCAGTACAAGGAGATGGAGGGCAAGGTGTCGACCACGCTGTCCGGGCTGGAGGGTGAGC TGAAGGGC



consensusID : consensus_9121#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 209
fasta sequence
                              [GATAGCTACAGCTACGAACGGGAACAGTCGGGACTACCGTAGCGACCGCCGGCGGATACGACCGTACATGGCGGTGGCGGTGGAGGCGTACCCGAGTCGGGCGGCTACGGCAGAGTCGCCCGTCGACCGATGATGGCGGGTATACNNTTGGAAGGCGGACGGCGGCGGGTGGCGTACCNGTGCGGCAACACGGGCNGCCGGAAGGCCGG]

[+] EMBL AL696964             [GATAGCTACAGCTACGAACGGGAACAGTCGGGACTACCGTAGCGACCGCCGGCGGATACGACCGTACATGGCGGTGGCGGTGGAGGCGTACCCGAGTCGGGCGGCTACGGCAGAGTCGCCCGTCGACCGATGATGGCGGGTATACNNTTGGAAGGCGGACGGCGGCGGGTGGCGTACCNGTGCGGCAACACGGGCNGCCGGAAGGCCGG]


>consensus_9121#6 GATAGCTACAGCTACGAACGGGAACAGTCGGGACTACCGTAGCGACCGCCGGCGGATACG ACCGTACATGGCGGTGGCGGTGGAGGCGTACCCGAGTCGGGCGGCTACGGCAGAGTCGCC CGTCGACCGATGATGGCGGGTATACNNTTGGAAGGCGGACGGCGGCGGGTGGCGTACCNG TGCGGCAACACGGGCNGCCGGAAGGCCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9121#0      ------------------------------------------------------------
consensus_9121#5      CCGCCCACGCGTCCTCGACTCTGCTGGACTGCGTCCAGTCTGGTTTCGAGAACCCAGACT 60
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      -----------------------------------GCAATTCGCGCTGTTGGCCCGGAAT 25
consensus_9121#1      -------------CTCATGCAGAATTCCCTGAGGTTTAACTCCGCACAATCAGTATACGT 47
consensus_9121#2      ----------------------------------------------CCGCCCACGCGTCC 14
consensus_9121#4      -------------------------------------------------TCCATGCAGAT 11
                                                                                  

consensus_9121#0      ----------------------------------------------------------CC 2
consensus_9121#5      CCGGCGTCGGCATCTACGCCCCGGACGCTGAGGCGTACTCCCTGTTCGCTGATTTGTTCG 120
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      CGGTTGTTATTAGTCTTGCGCTGATTGATAAAAGCAGGTTGATTTTATCGCACGATGTAG 85
consensus_9121#1      GCATTATCGACGGTACTGCTGCTAGCGGGACTAGTGGCCTGTGTTGCCGGGCTGCTGACG 107
consensus_9121#2      GCCCACGCGTCCGAGCCGTAGTTCCCGCCCTTTTCGCTCGCACCGTCCGGCCCGTGAGCG 74
consensus_9121#4      CCCGAGGTTATCTTCGGGCATCTGGTGCCGGCACAACTGGGCAAAGGACACTACACCGAG 71
                                                                                  

consensus_9121#0      AGGCTTTAATTGAGGACTAC-ACAAGGGCTTCAAGAAGACCGATTAGCACCCGGC-AGTG 60
consensus_9121#5      ACCCGATCATCGAGGACTACCACAAGGGCTTCAAGAAGACCGACAAGCACCCGGCCAGTG 180
consensus_9121#6      -----------------------GATAGCTACAGCTA---CGAACGGGAACAGTC--GGG 32
consensus_9121#3      GCACTTTACGCAATCGCCTTTTTGCAGACCGGATTTCGGGGGTTGTTTTTCCGGCACATC 145
consensus_9121#1      GACGATGCCTGCCCACAGGATGTGACGGCGATGAGTGGCTTTTCGCTGAACGATTACGCC 167
consensus_9121#2      AGTGTGCCTTCGACGCCTTTTCCGTCCAGCGAAGTTCACCAATCCGTGCCCAGCTCGAGC 134
consensus_9121#4      GGTGCTGAGCTGGTCGATGCCGTGTTGGATGTGGTGCGCAAGGAGTGCGAGAACTGCGAC 131
                                                                                  

consensus_9121#0      ACTTCG--GTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTC 118
consensus_9121#5      ACTTCG--GTGATGTGAACGCCTTCGGCAACGTCGACCCGACCGGCGAGTTCGTCGTGTC 238
consensus_9121#6      ACTACC--GTA--GCGACCGCCGGCGGATACGACCGTACA--TGGCGGTGGCG----GTG 82
consensus_9121#3      ACT-CT--TCGGGCTGCTCCTCGATGGGCTCCTGGATAGGTTCGTCGCAAGCGCCACGGC 202
consensus_9121#1      GGCGTG--GTACGAGATCAAGCGGTACGAGCAGTTCTACGAGAAGGATCTGGACTGGTGG 225
consensus_9121#2      TATTCGAGGTGAACTTCCTTTTTTTCCAAGCGTTCGAGTTGCTCGTGAAAATGCAGTGAA 194
consensus_9121#4      TGTCTG--CAGGGATTCCAACTGACGCACTCACTGGGAGGTGGTACCGGTTCG-GGTATG 188
                                                    *                             

consensus_9121#0      GACCCGCGTCCGT-TGCGGTCGCTCGATGGAGGGCTACCC----------GTTCAAC--- 164
consensus_9121#5      GACCCGCGTCCGT-TGCGGTCGCTCGATGGAGGGCTACCC----------GTTCAAC--- 284
consensus_9121#6      GAGGCGTACCCGA-GTCGGGCGGCTACGGCAGAGTCGCCC----------GT-CGAC--- 127
consensus_9121#3      GCAACACTCGCAG-CTCGATCGACCGTGCCGCCATTTCCTCCGCCTTGCAGTCCAGCATG 261
consensus_9121#1      TGGGCGAGTATCA-GAAGAAGGGGCGAAACAAGATCTCGGTGAAAGAAATGGTNGCCT-- 282
consensus_9121#2      ATTGCAGGGCCCC-AGTGTTCGCTCAGTGTCCCTGTTCGTGCTCCTAGAAGTAATCCC-- 251
consensus_9121#4      GGCACGCTGCTGATCTCGAAAATCCGCGAAGAGTATCCGGATCGTATCATGAACACCTAC 248
                          *            *                   *            *     *   

consensus_9121#0      CCCTGCCTGACCG--AGGCCCAGTACAAGGAGATGGAGG--GCAAGGTGTCGACCACGCT 220
consensus_9121#5      CCCTGCCTGACCG--AGGCCCAGTACAAGGAGATGGAGG--GCAAGGTGTCGACCACGCT 340
consensus_9121#6      CGATGA-TGGC----GGGTATACNNTTGGAAGGCGGACG--GCGGCGGGTGGCGTAC-CN 179
consensus_9121#3      CAGCGGTTAGCGGGCGTGCTCAGATCCGTACCACAGACG--GGGTCGTATATGCGGGGAC 319
consensus_9121#1      TCAGGCCTGGCGAAACAATACGCGCGTGGTGGGCGGACAC-GTGTAACNGGGCGTGGTTA 341
consensus_9121#2      CGGAAGTTCGTCTG-AAGTCTGACCGTTTCGTATAGACAC-AGACTATACTGC-TAAGAG 308
consensus_9121#4      TCGGTTTGTACCGGCGCCGCAAAGTGTCGGACACGGTGGTTGAGCCGTACAATTGCTAAC 308
                                                         *                        

consensus_9121#0      GTCCGGGCTGGAGGGTGAGCTG-AAGGGCAAGTTCTACCCGCTGACCGGCATGGACAAGG 279
consensus_9121#5      GTCCGGGCTGGAGGGTGAGCTG-AAGGGC------------------------------- 368
consensus_9121#6      GTGCGGCAACACGGGCNGCCGG-AAGGCCGG----------------------------- 209
consensus_9121#3      AGGCGCAAGCACCATCCTTCGA-GCGTCTGGCGTAGACACTTTCACCGCCCAGCAGAACT 378
consensus_9121#1      TCCTACCCGGGACGAGCGCCGG-ACCATCCGGGCCAAAGC--TGAGCGTCCGCTGTCTCT 398
consensus_9121#2      TTTCACCGTCACCGACCTCCGTTACTACTGTGTTCCTTATTTACAAATCGTACCAAACGT 368
consensus_9121#4      CTCTCGATCCATCAGCTGGTGGAGAACACGGACCGAGCACGGTACTGGTATCGAATAACG 368
                                                                                  

consensus_9121#0      CCGTCCAGCAGCAGCTGATCGACGATCACTTCCTGTTCAAGGAGGGCGACCGTTTCCTGC 339
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      ATCGCGGCCAGCAGCACCACCACTAAACTCCAGGAACGCATCTTAATTAGCTCGTTTAGC 438
consensus_9121#1      TTTCCGGGACGCACACAGTGNCCGCATCGTAGCAAACTACTTGGGGTGCATANGACCAAC 458
consensus_9121#2      CCGTCCCGGAGTCGTGCAGAATGATGAGCTTCCTAAGGATGTTTGACCGCACCGGAAAGG 428
consensus_9121#4      AGGCCTTGTACCGATATCTGNTNACCGGAAACGCTTGAANGGTTGCCCAAATTCCGGAAG 428
                                                                                  

consensus_9121#0      AGGCCGCGAACGCGTGCCGCTACTGGCCGTCCG-GTCGCGGTATCTACCACAACGACAAC 398
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      AACGGACAGATGATCCTAACAGAAAGTCACACG-TTTACGGAATCAGGGAAAAACACACA 497
consensus_9121#1      AGGACATAAAANCCTCGGAGTTCCGCCGACACG-TCNTTGGTTCCCTGTGATGCACCGTA 517
consensus_9121#2      TGTTGCGCGCCGTCCAGCAGCGTCACTTTTCCA-TCGTGGGCAGCCCGAGCGTCAGTGCG 487
consensus_9121#4      CCTNACGGGCGATCTATTGAAGCCATTCTTCGGGTTATCGGTTGACCGGAATTGGTTCCC 488
                                                                                  

consensus_9121#0      AAGACCTTCCTGGTCTGGTGCAACGAGGAGGACCATCTGCGCATCATCTCGATGCAGATG 458
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      AGTACAACTATTTCGTCAGCTGTAGCAGAAATCGCACAAAGCAATCCAGTAGGCCAACAG 557
consensus_9121#1      TACCATTTNCCGGGAGTCCACATCCCAAAAGAATTGTACATCGGNCTATCACTANGANAA 577
consensus_9121#2      TACCTTATGCAGCAGGCAAGAAAGGCGAAAAACGTTAACCGCACCCTGCACGGTCTGCAC 547
consensus_9121#4      GGTGTTGAACCAACCTTGTTCTGCGGAATTACCCCGGNGAACAGCTTGAAATGCCGGAAT 548
                                                                                  

consensus_9121#0      GGTGGCGATCTCGGCCAGGTCTACCGCCGTCTGGTGACCGCGTCAACGACATCGAGAAGC 518
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      ------------------------------------------------------------
consensus_9121#1      TTATTTCTCTGCCGCAACCCCAAAAAACCATTATCCCCGCAACCGGAAGAAAAAACNCAG 637
consensus_9121#2      GAGCGCAAGCAGGCGACATTCAGCGAGCGCAACCAGCTAAAGTACGCCCGGGCGGCTTGG 607
consensus_9121#4      A----------------------------------------------------------- 549
                                                                                  

consensus_9121#0      GCATCCCGTTCTCGCACCAGACGTCTCGGTTCCTGACCTTCTGCCCGACAACCTTGGACC 578
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      ------------------------------------------------------------
consensus_9121#1      TAGTANTAAAGACACNACTGTATGGCAAACAAGACATGNGGTTACAAAAGNAAGTAACAG 697
consensus_9121#2      TTGGTGAAAGTGGGGCAGTGC--------------------------------------- 628
consensus_9121#4      ------------------------------------------------------------
                                                                                  

consensus_9121#0      ACATCCGGCTCGGTCCACATCAAGGTGNCGAAGNCTGGCCAAGGGACTTAACGCGAAAGG 638
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      ------------------------------------------------------------
consensus_9121#1      CCCGGANCACAGATCCAAAGT--------------------------------------- 718
consensus_9121#2      ------------------------------------------------------------
consensus_9121#4      ------------------------------------------------------------
                                                                                  

consensus_9121#0      CTGGAGGCGACGGCGACAAGTAACAACCTGACAGGGTGCGCGGTAACCCGGGTGAGCACT 698
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      ------------------------------------------------------------
consensus_9121#1      ------------------------------------------------------------
consensus_9121#2      ------------------------------------------------------------
consensus_9121#4      ------------------------------------------------------------
                                                                                  

consensus_9121#0      CCGAGGACGAGGGCGGCATCTANGACAATCTTCAAAAAGGCCGCATGGGAATGACCGAAG 758
consensus_9121#5      ------------------------------------------------------------
consensus_9121#6      ------------------------------------------------------------
consensus_9121#3      ------------------------------------------------------------
consensus_9121#1      ------------------------------------------------------------
consensus_9121#2      ------------------------------------------------------------
consensus_9121#4      ------------------------------------------------------------
                                                                                  

consensus_9121#0      CGGGCGAAGGTTTTCCCTTAGTGAGGT 785
consensus_9121#5      ---------------------------
consensus_9121#6      ---------------------------
consensus_9121#3      ---------------------------
consensus_9121#1      ---------------------------
consensus_9121#2      ---------------------------
consensus_9121#4      ---------------------------
                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)