cluster # 9126

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9126 cluster # 9126 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9126#0 length = 1100 sequences # 9
consensus_9126#1 length = 939 sequences # 3

consensus_9126#2 length = 328 sequences # 1
consensus_9126#3 length = 299 sequences # 1

consensusID : consensus_9126#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1100
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGTTCGTACCCAGCAGGACGTAAAAGGCAACAAAAAAACTAATTCCCCATTTCGGTCCGTGATTTCGCGCGTGTCGTCGTATGTGCACAGCGAGGAAAATTAATCTTCTAGACTTTTGCTAGCCCGTGATCCAAATTACCAGTCCGAGTGCTGCCAAATAGTTTCCGTGTCGAGCTCGTGTCGTGTGTGTAGCCCTCCTCCCGTGCAAGGGTGTGTGTTCGCGCGTGTGCGTGTGTTGCTGTGAGTGTGTGCGTGTGTGTGTGTGTGCGTCCATTTGGCCACATTGTGTTCGAGAACAAACAGGCCCCAGACGCACGGACACAGAGCCGTGATTGGAAGGGAAACGGCACCAAATACGCGGCCAGCTAGCCAGCCAGCGAGAGAGAGAGAGAGAGCGCGCGTCACCGCGTTTTGTTCAGCGTGCGATCGATCATAAAGAAGCAGGAACACAACAAACAAACAGCAGCAGCAGCCGCAGCACCATCACCAGCACGGGGCGGAAGTGAACATTTCGGCGTGCAATTTATTTCGAGCGTGTGAATCCAACGTTTGTGTTTGTGTGTGAGCGCGCGCGCGTCCCGTTGCATTTGCTGCATCGTATCGGAGGCTGCACGATCGCACCGTGCAAATCACGACGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTGTGTGTCGCGAGTGTGTCTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAAGGAAGGAAACGGGCGTCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGGAGGTGGCCATCTTCGGGCCGCCGGACACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAATTTCCCCCAGACTATCC]

[+] EMBL BM647404             [CCGCGGACGCGTGGGCGGACGCGTGGGTTCGTACCCAGCAGGACGTAAAAGGCAACAAAAAAACTAATTCCCCATTTCGGTCCGTGATTTCGCGCGTGTCGTCGTATGTGCACAGCGAGGAAAATTAATCTTCTAGACTTTTGCTAGCCCGTGATCCAAATTACCAGTCCGAGTGCTGCCAAATAGTTTCCGTGTCGAGCTCGTGTCGTGTGTGTAGCCCTCCTCCCGTGCAAGGGTGTGTGTTCGCGCGTGTGCGTGTGTTGCTGTGAGTGTGTGCGTGTGTGTGTGTGTGCGTCCATTTGGCCACATTGTGTTCGAGAACAAACAGGCCCCAGACGCACGGACACAGAGCCGTGATTGGAAGGGAAACGGCACCAAATACGCGGCCAGCTAGCCAGCCAGCGAGAGAGAGAGAGAGAGCGCGCGTCACCGCGTTTTGTTCAGCGTGCGATCGATCATAAAGAAGCAGGAACACAACAAACAAACAGCAGCAGCAGCCGCAGCACCATCACCAGCACGGGGCGGAAGTGAACATTTCGGCGTGCAATTTATTTCGAGCGTGTGAATCCAACGTTTGTGTTTGTGTGTGAGCGCGCGCGCGTCCCGTTGCATTTGCTGCATCGTATCGGAGGCTGCACGATCGCACCGTGCAAATC   ACGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGc                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM577087             [                    ccgaattTTCGTACCCAGCAGAACGTAAAAGGCAACAAAAAAACTAATTCCCCATTTCGGTCCGTGATATCGCGCGTGTCGTCGTATGTGCACAGCGAGGAAAATTAACATTCTAGCCTTTTGCTAGCCCGTGATCCAAATTACCAGTCCGAGTGCTGCCAAATAGTTTCCGTGTCGAGCTCGTGTCGTGTGTGTAGCCCTCCTCCCGTGCAAGGGTGTGTGTTCGCGCGTGTGCGTGTGTTGCTGTGAGTGTGTGC  GTGTGTGTGTGTGCGTCCATTTGGCCACATTGTGTTCGAGAACAAACAGGCCCCAGACGCACGGACACAGAGCCGTGATTGGAAGGGAAACGGCATCAAATACGCGGCCAGCCAGCCAGCCAGC  GAGAGAGAGAGAGAGCGCGCGTCACCGCGTTTTGTTCAGCGTGCGATCGATCATAAAGAAGCAGGAACACAACAAACAAACAGCAGCAGCAGCCGCAGCACCCTCACCAGCACGGGGCGGAAGTGAACATTTCGGCGTGCAATTTATTTCGAGCGTGTGAATCCAACGTTTGTGTTTGTGTGTGAGCGCGCGCGCGTCCCGTTGCATTTGCTGCATCGTATCGGAGGCTGCACGATCGCACCGTGCAAATCACGACGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGCGAGCGAGAG                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM621392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccGCAGGAACACAACAAACAAACAGCAGCAGCAGCCGCAGCACCATCACCAGCACGGGGCGGAAGTGAACATTTCGGCGTGCAATTTATTTCGAGCGTGTGAATCCAACGTTTGTGTTTGTGTGTGAGCGCGCGCGCGTCCCGTTGCATTTGCTGCATCGTATCGGAGGCTGCACGATCGCACCGTGCAAATCACGACGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTGTGTGTCGCGAGTGTGTCTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAAGGAAGGAAACGGGCATCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGGAGGTAGCCATCTTCGGGCCGCCGGACACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAATTTCCCCCAGACTATCC]
[+] EMBL BX628511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCACCGTGCAAATCACNACCACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTGTGTGTCGCGAGTGTGTCTAGTTGCTAGTTGG                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM638773             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTGTGTGTCGCGAGTGTGTCTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAGGGAAGGAAACGGGCGTCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGGAGGTGGCCATCTTCGGGCCGCCGGATACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAATTTCCCCCAGACTATCC]
[+] EMBL BM625927             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTGTGTGTCGCGAGTGTGTCTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAGGGAAGGAAACGGGCGTCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGGAGGTGGCCATCTTCGGGCCGCCGGATACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAATTTCCCCCAGACTATCC]
[+] EMBL BM624232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTGTGTGTCGCGAGTGTGTCTAGTTGCT GTGGGTGGCGCGGTCGATTAGGGGGAAGGAAGGAAACGGGCGTCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGGAGGTGGCCATCTTCGGGCCGCCGGACACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAATTTCCCCCAGACTATCC]
[+] EMBL BM654154             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccgCGCGAGTGTGTCTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAGGGAAGGAAACGGGCGTCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGGAGGTGGCCATCTTCGGGCCGCCGGATACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAATTTCCCCCAGACTATCC]
[+] EMBL BM614493             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAAGGAAGGAAACGGGCATCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGCGGGAGGTAGCCATCTTCGGGCCGCCGGACACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATGAAATTTCCCCCAGACTATCC]




>consensus_9126#0
CCGCGGACGCGTGGGCGGACGCGTGGGTTCGTACCCAGCAGGACGTAAAAGGCAACAAAA
AAACTAATTCCCCATTTCGGTCCGTGATTTCGCGCGTGTCGTCGTATGTGCACAGCGAGG
AAAATTAATCTTCTAGACTTTTGCTAGCCCGTGATCCAAATTACCAGTCCGAGTGCTGCC
AAATAGTTTCCGTGTCGAGCTCGTGTCGTGTGTGTAGCCCTCCTCCCGTGCAAGGGTGTG
TGTTCGCGCGTGTGCGTGTGTTGCTGTGAGTGTGTGCGTGTGTGTGTGTGTGCGTCCATT
TGGCCACATTGTGTTCGAGAACAAACAGGCCCCAGACGCACGGACACAGAGCCGTGATTG
GAAGGGAAACGGCACCAAATACGCGGCCAGCTAGCCAGCCAGCGAGAGAGAGAGAGAGAG
CGCGCGTCACCGCGTTTTGTTCAGCGTGCGATCGATCATAAAGAAGCAGGAACACAACAA
ACAAACAGCAGCAGCAGCCGCAGCACCATCACCAGCACGGGGCGGAAGTGAACATTTCGG
CGTGCAATTTATTTCGAGCGTGTGAATCCAACGTTTGTGTTTGTGTGTGAGCGCGCGCGC
GTCCCGTTGCATTTGCTGCATCGTATCGGAGGCTGCACGATCGCACCGTGCAAATCACGA
CGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTGTG
TGTCGCGAGTGTGTCTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAAGGAAGGAAA
CGGGCGTCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCACA
GACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGACC
GCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGGAG
GAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGGAG
GTGGCCATCTTCGGGCCGCCGGACACGCTCTACCAGGGCGGCTACTTCAAGGCGCACATG
AAATTTCCCCCAGACTATCC

consensusID : consensus_9126#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 939
fasta sequence

                              [TAAAACGTTTTATTAACGAACAATTCTTTGCTGTGTGTCATGCTTCTTTTGTGTGTTTTACATCGTTACGTCAGTAAATCAAAGAATAATCATGCATGTCAC-AAAAGCAAGG-AAAGGAGTTTGACTCCTCGTTTCGTTCGAGGAAACTTCTCTTCCGAAGTTTCGTTGTAAGTGTTAACAATAGAAAAAAAATAAGGAAATGTC--GAGAGAGATCCACTCTCGTTC-GCAACACGCAACTACACCACCCCCTCCCCAGTTACTCCCACTCTTCCTCCGGCTCGAGGGCAACCGGCTGGGCATCGACACGCGAACCGTACGAGTCGCGGATATCCTTGCCACCGAACTGGGACGATCCCATGTACGATCCGGAGCCGCCAGCATCCTTCAAAAAGTCCGGCACCGACTGCCCGGCCTGGGTGAGAATCTTCACCAGATCGCTCGCCATAGCCCGGTCCGCCTCCGGGTCGTAGAAGCTAGTCGCTCGGCCCTTGTTGCCGACGCGCCCGGTTCGCCCGATACGGTGCACGTAATCATCGATGCTCTTCGGCAGATCGTAGTTCACCACGTGGTTCACATTTTTAATGTCCAGCCCGCGGGCCGCTACCGACGTCGCGATCAGCACGTCCATCCGCCCGGACTTGAAATCGTACAGCGCCATCTCGCGCTCCCGCTGCAACCGATCGCCATGGATGGAGGTGGTCGGGAACTGCGTCTCGGACATCAGCGATGCCAGAAAGTCCGCATTGCGCTTCGTCTCCACGAACACGAGCGTACCCTTGGGATTGCCGCCGTTCAGGATCTCCTCCAGCTTCTTGCGCTTCTTGAACTTTTCCACCAGATGGATCGTCTGCTCCACATCGGCACACGCTCCGCCGACGATGCCACGAACACGCAGATGTAGTTGTGCAGGAACTTGCCCGCCAGCTCCTGGATTTCGGC]

[+] EMBL CNS08EO1             [TAAAACGTTTTATTAACGAACAATTCTTTGCTGTGTGTCATGCTTCTTTTGTGTGTTTTACATCGTTACGTCAGTAAATCAAAGAATAATCATGCATGTCAC AAAAGCAAGG AAAGGAGTTTGACTCCTCGTTTCGTTCGAGGAAACTTCTCTTCCGAAGTTTCGTTGTAAGTGTTAACATTAGAAAAAAAATAAGGAAATGTCGAGAGAGAGATCCACTCTCGTTC GCAACACGCAACTACCCCACCCCCTCCCCTGTTACTCCCACTCTTCCTCCGGCTCGAGGGCAACCGGCTGGGCATCGACACGCGAACCGTACGAGTCGCGGATATCCTTGCCACCGAACTGGGACGATCCCATGTACGATCCGGAGCCGCCAGCATCCTTCAAAAAGTCCGGCACCGACTGCCCGGCCTGGGTGAGAATCTTCACCAGATCGCTCGCCATAGCCCGGTCCGCCTCCGGGTCGTAGAAGCTAGTCGCTCGGCCCTTGTTGCCGACGCGCCCGGTTCGCCCGATACGGTGCACGTAATCATCGATGCTCTTCGGCAGATCGTAGTTCACCACGTGGTTCACATTTTTAATGTCCAGCCCGCGGGCCGCTACCGACGTCGCGATCAGCACGTCCATCCGCCCGGACTTGAAATCGTACAGCGCCATCTCGCGCTCCCGCTGCAACCGATCGCCATGGATGGAGGTGGTCGGGAACTGCGTCTCGGACATCAGCGATGCCAGAAAGTCCGCATTGCGCTTCGTCTCCACGAACACGAGCGTACCCTTGGGATTGCCGCCGTTCAGGATCTCCTCCAGCTTCTTGCGCTTCTTGAACTTTTCCACCAGATGGATCGTCTGCTCCACATCGGCACACGCTCCGCCGACGATGCCACGAACACGCAGATGTAGTTGTGCAGGAACTTGCCCGCCAGCTCCTGGATTTCGGC]
[-] EMBL BM606368             [                                                                           AAATGAAAGAATAATCATTCATGTCAC AAAAGCAAGG AAAGGAGTTTGTCTCCTCGTTTAATTCGAGGAAACTTCTCTTCCGAAGTTTCGTTGTAAGTGTTAACAATAGAAAAAAAATAAGGAAATGTC  GAGAGAGATCCACTCTCGTTCAGCAACACGCAACTACACCACCCCCTCCCCAGTTACTCCCACTCTTCCTCCGGCTCGAGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BM587684             [                                                                                             GCATGTCACAAAAAGCAAGGAAAAGGAGTTTGACTCCTCGTTTCGTTCGAGGAAACTTCTCTTCCGAAGTTTCGTTGTAAGTGTTAACAATAGAAAAAAAATAAGGAAATGTC  GAGAGAGATCCACTCTCGTTC GCAACACGCAACTACACCACCCCCTCCCCAGTTACTCCCACTCTTCCTCCGGCTCGAGGGCAACCGGCTGGGCATCGACACGCGAACCGTACGAGTCGCGGATATCCTTGCCACCGAACTGGGACGATCCCATGTACGAGCCGGAGCCGCCAGCATCCTTCAAAAAGTCCGGCACCGACTGCCCGGCCTGGGTGAGAATCTTCACCAGATCGCTCGCCATAGCCCGGTCCGCCTCCGGGTCGTAGAAGCTAGTCGCTCGGCCCTTGTTACCGACGCGCCCGGTTCGCCCGATACGGTGCACGTAATCATCGATGCTCTTCGGCAGATCGTAGTTCACCACGTGGTTCACATTTTTTATGTCCAGCCCGCGGGCCGCTACCGACGTCGCGATCAGCACGTCCATCCGCCCGGACTTGAAATCGTACAGCGCCATCTCGCGCTCCCGg                                                                                                                                                                                                                                                                            ]




>consensus_9126#1
TAAAACGTTTTATTAACGAACAATTCTTTGCTGTGTGTCATGCTTCTTTTGTGTGTTTTA
CATCGTTACGTCAGTAAATCAAAGAATAATCATGCATGTCACAAAAGCAAGGAAAGGAGT
TTGACTCCTCGTTTCGTTCGAGGAAACTTCTCTTCCGAAGTTTCGTTGTAAGTGTTAACA
ATAGAAAAAAAATAAGGAAATGTCGAGAGAGATCCACTCTCGTTCGCAACACGCAACTAC
ACCACCCCCTCCCCAGTTACTCCCACTCTTCCTCCGGCTCGAGGGCAACCGGCTGGGCAT
CGACACGCGAACCGTACGAGTCGCGGATATCCTTGCCACCGAACTGGGACGATCCCATGT
ACGATCCGGAGCCGCCAGCATCCTTCAAAAAGTCCGGCACCGACTGCCCGGCCTGGGTGA
GAATCTTCACCAGATCGCTCGCCATAGCCCGGTCCGCCTCCGGGTCGTAGAAGCTAGTCG
CTCGGCCCTTGTTGCCGACGCGCCCGGTTCGCCCGATACGGTGCACGTAATCATCGATGC
TCTTCGGCAGATCGTAGTTCACCACGTGGTTCACATTTTTAATGTCCAGCCCGCGGGCCG
CTACCGACGTCGCGATCAGCACGTCCATCCGCCCGGACTTGAAATCGTACAGCGCCATCT
CGCGCTCCCGCTGCAACCGATCGCCATGGATGGAGGTGGTCGGGAACTGCGTCTCGGACA
TCAGCGATGCCAGAAAGTCCGCATTGCGCTTCGTCTCCACGAACACGAGCGTACCCTTGG
GATTGCCGCCGTTCAGGATCTCCTCCAGCTTCTTGCGCTTCTTGAACTTTTCCACCAGAT
GGATCGTCTGCTCCACATCGGCACACGCTCCGCCGACGATGCCACGAACACGCAGATGTA
GTTGTGCAGGAACTTGCCCGCCAGCTCCTGGATTTCGGC

consensusID : consensus_9126#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 328
fasta sequence

                              [GATCGCCCGAGGTTAACAGTGCGGACGTACATTAGACATCGGTCGACTCAGTCTTTTCTATTCCCAGTTGTTCGAATTAGCAACCAGCACCAGCTCACTGTACAAAGGAGTTAAGCCCAGGAAACGAAAGTAAACTACAAAAGCCCTAAACAAGAAGCGAGCGCAAAATGTCGGACGATTACGACAAGGTACGACTTTGAGCACTGGAGAAGCACATCCCACTCCGGGGCCACAGGTGGCAAGCCAGCGCAGCCAAGAAGGAGGCAAAGCGACAAAACAACATTACGATCCCGAGCGGGCATTCGCGCAAGCATTGTGACCAAGGCTG]

[+] EMBL AL930932             [GATCGCCCGAGGTTAACAGTGCGGACGTACATTAGACATCGGTCGACTCAGTCTTTTCTATTCCCAGTTGTTCGAATTAGCAACCAGCACCAGCTCACTGTACAAAGGAGTTAAGCCCAGGAAACGAAAGTAAACTACAAAAGCCCTAAACAAGAAGCGAGCGCAAAATGTCGGACGATTACGACAAGGTACGACTTTGAGCACTGGAGAAGCACATCCCACTCCGGGGCCACAGGTGGCAAGCCAGCGCAGCCAAGAAGGAGGCAAAGCGACAAAACAACATTACGATCCCGAGCGGGCATTCGCGCAAGCATTGTGACCAAGGCTG]




>consensus_9126#2
GATCGCCCGAGGTTAACAGTGCGGACGTACATTAGACATCGGTCGACTCAGTCTTTTCTA
TTCCCAGTTGTTCGAATTAGCAACCAGCACCAGCTCACTGTACAAAGGAGTTAAGCCCAG
GAAACGAAAGTAAACTACAAAAGCCCTAAACAAGAAGCGAGCGCAAAATGTCGGACGATT
ACGACAAGGTACGACTTTGAGCACTGGAGAAGCACATCCCACTCCGGGGCCACAGGTGGC
AAGCCAGCGCAGCCAAGAAGGAGGCAAAGCGACAAAACAACATTACGATCCCGAGCGGGC
ATTCGCGCAAGCATTGTGACCAAGGCTG

consensusID : consensus_9126#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 299
fasta sequence

                              [CCGCCGGCCGAGGGGTTATCCATCCATCCAATCCAGATCGTGTGTATGTGATGGTGTGCTTTTTTTGAGGAAGAATCGAAGAAGAAAAGTCCACACACACGCACCCGGCCGAGGGGTTATCCATCCATCCAATCCAGATCGTGCCCATCTGCTCCTGTCCCCGCTGGCAGCCATGTAAACGGATTCGGAACCGGAACAACATTCATCGGTTCCGTGGTGTGAACGGTCGGAAAGGAAAGCACAGGCTCGTTAAGGATACCCAATAAATTCGTGTTATCTACTTGGAAAAAGGAAAATCT]

[+] EMBL BM613467             [CCGCCGGCCGAGGGGTTATCCATCCATCCAATCCAGATCGTGTGTATGTGATGGTGTGCTTTTTTTGAGGAAGAATCGAAGAAGAAAAGTCCACACACACGCACCCGGCCGAGGGGTTATCCATCCATCCAATCCAGATCGTGCCCATCTGCTCCTGTCCCCGCTGGCAGCCATGTAAACGGATTCGGAACCGGAACAACATTCATCGGTTCCGTGGTGTGAACGGTCGGAAAGGAAAGCACAGGCTCGTTAAGGATACCCAATAAATTCGTGTTATCTACTTGGAAAAAGGAAAATCT]




>consensus_9126#3
CCGCCGGCCGAGGGGTTATCCATCCATCCAATCCAGATCGTGTGTATGTGATGGTGTGCT
TTTTTTGAGGAAGAATCGAAGAAGAAAAGTCCACACACACGCACCCGGCCGAGGGGTTAT
CCATCCATCCAATCCAGATCGTGCCCATCTGCTCCTGTCCCCGCTGGCAGCCATGTAAAC
GGATTCGGAACCGGAACAACATTCATCGGTTCCGTGGTGTGAACGGTCGGAAAGGAAAGC
ACAGGCTCGTTAAGGATACCCAATAAATTCGTGTTATCTACTTGGAAAAAGGAAAATCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9126#1      ------------------------------------------------------------
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      CCGCGGACGCGTGGGCGGACGCGTGGGTTCGTACCCAGCAGGACGTAAAAGGCAACAAAA 60
                                                                                  

consensus_9126#1      ----------------------------------------------------------TA 2
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      AAACTAATTCCCCATTTCGGTCCGTGATTTCGCGCGTGTCGTCGTATGTGCACAGCGAGG 120
                                                                                  

consensus_9126#1      AAACGTTTTATTAACGAACAATTCTTTGCTGTGTGTCATGCTTCTTTTGTGTGTTTTACA 62
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      AAAATTAATCTTCTAGACTTTTGCTAGCCCGTGATCCAAATTACCAGTCCGAGTGCTGCC 180
                                                                                  

consensus_9126#1      TCGTTACGTCAGTAAATCAAAGAATAATCATGCATGTCACAAAAGCAAGGAAAGGAGTTT 122
consensus_9126#3      ------------------------------------------CCGCCGGCCGAGGGGTT- 17
consensus_9126#2      -------------------------------------------GATCGCCCGAGGTTAAC 17
consensus_9126#0      AAATAGTTTCCGTGTCGAGCTCGTGTCGTGTGTGTAGCCCTCCTCCCGTGCAAGGGTGTG 240
                                                                          ***     

consensus_9126#1      GACTCCTCGTTTCGT--------TCGAGGAAACTTCTCTTCCGAAGTTTCGTTGTAAGTG 174
consensus_9126#3      -ATCCATCCATCCAA--------TCCAGATCGTGTGTAT------GTGATGGTGTGCTTT 62
consensus_9126#2      AGTGCGGACGTACAT--------TAGACATCGGTCGACTCAGTCTTTTCTATTCCCAGTT 69
consensus_9126#0      TGTTCGCGCGTGTGCGTGTGTTGCTGTGAGTGTGTGCGTGTGTGTGTGTGTGCGTCCATT 300
                          *     *                           *       *           * 

consensus_9126#1      TTAACAATAGAAAAAAAATAAGGA---AATGTCGAGAGAGATCCACTCTCGTTCGCAACA 231
consensus_9126#3      TTTTGAGGAAGAATCGAAGAAGAA---AA-GTCCACACACACGCACCC--GGCCG--AGG 114
consensus_9126#2      GTTCGAATTAGCAACCAGCACCAGCTCACTGTACAAAGGAGTTAAGCCCAGGAAACGAAA 129
consensus_9126#0      TGGCCACATTGTGTTCGAGAACAAA-CAGGCCCCAGACGCACGGACACAGAGCCGTGATT 359
                           *             *       *      * *       *  *         *  

consensus_9126#1      CGCAACTACACCACCCCCTCCCCAGTTACTCCC--ACTCTTCCTCCGGCTCGAGGGCAAC 289
consensus_9126#3      GGTTA-TCCATCCATCCAATCCAGATCGTGCCC--ATCTGCTCCTGTCCCCGCTGGCAGC 171
consensus_9126#2      GTAAACTACAAAAGCCCTAAACAAGAAGCGAGC--GCAAAATGTCGGAC--GATTACGAC 185
consensus_9126#0      GGAAG-GGAAACGGCACCAAATACGCGGCCAGCTAGCCAGCCAGCGAGAGAGAGAGAGAG 418
                               *      *               *                  *        

consensus_9126#1      CGGCTGGGCATC---GACACGCGAACCGTACGAGTCG-CGGATATCCTTGCCACCGAACT 345
consensus_9126#3      CATGTAAACG-----GATTCG-GAACCG---GAACAA-CATTCATCGGTTCCGTGGTGT- 220
consensus_9126#2      AAGGTACG-------ACTTTGAGCACTG---GAGAAG-CACAT-CCCACTCCGGGGCCAC 233
consensus_9126#0      AGCGCGCGTCACCGCGTTTTGTTCAGCGTGCGATCGATCATAAAGAAGCAGGAACACAAC 478
                                          *   *  *   **     *                     

consensus_9126#1      GGGACGATCCCATGTACGATC-CGGAGCCGCCAGCATCCTTCAAAAAGTCCGGCACCGAC 404
consensus_9126#3      -GAACGGTCGGAAAGGAAAGCACAGGCTCGTTAAGGATACCCAATAAATTCG-TGTTATC 278
consensus_9126#2      AGGTGGCAAGCCAGCGCAGCCAAGAAGGAGGCAAAGCGACAAAACAACATTA-CGATCCC 292
consensus_9126#0      AAACAAACAGCAGCAGCAGCCGCAGCACCATCACCAGCACGGGGCGGAAGTGAACATTTC 538
                                          *           *                          *

consensus_9126#1      TGCCCGGCCTGGGTGAGAATCTTCACCAGATCGCTCGCCATAGCCCGGTCCGCCTCCGGG 464
consensus_9126#3      TACTTGGAAAAAG-GAAAATCT-------------------------------------- 299
consensus_9126#2      GAGCGGGCATTCGCGCAAGCATTGTGACCAAGGCTG------------------------ 328
consensus_9126#0      GGCGTGCAATTTATTTCGAGCGTGTGAATCCAACGTTTGTGTTTGTGTGTGAGCGCGCGC 598
                           *                                                      

consensus_9126#1      TCGTAGAAGCTAGTCGCTCGGCCCTTGTTGCCGACGCGCCCGGTTCGCCCGATACGGTGC 524
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      GCGTCCCGTTGCATTTGCTGCATCGTATCGGAGGCTGCACGATCGCACCGTGCAAATCAC 658
                                                                                  

consensus_9126#1      ACGTAATCATCGATGCTCTTCGGCAGATCGTAGTTCACCACGTGGTTCACATTTTTAATG 584
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      GACGACCCGCAGTCGAGGGAAGCTGTGCCGCAGTCACAGAGAGCGAGAGATAGATAAGTG 718
                                                                                  

consensus_9126#1      TCCAGCCCGCGGGCCGCTACCGACGTCGCGATCAGCACGTCCATCCGCCCGGACTTGAAA 644
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      TGTGTCGCGAGTGTGTCTAGTTGCTAGTTGGTGGCGCTGTCGATTAGGGGGAAGGAAGGA 778
                                                                                  

consensus_9126#1      TCGTACAGCGCCATCTCGCGCTCCCGCTGCAACCGATCGCCATGGATGGAGGTGGTCGGG 704
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      AACGGGCGTCTTTAGCTTCCTTCGCTTACGTGACGAATCAGTGGTGTGATCCGTACGCCA 838
                                                                                  

consensus_9126#1      AACTGCGTCTCGGACATCAGCGATGCCAGAAAGTCCGCATTGCGCTTCGTCTCCACGAAC 764
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      CAGACACAAATCGAAACGAACCACACAACAACAGCCCCAAAATTCACAGATCCAAGATGA 898
                                                                                  

consensus_9126#1      ACGAGCGTACCCTTGGGATTGCCGCCGTTCAGGATCTCCTCCAGCTTCTTGCGCTTCTTG 824
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      CCGCCACACCGTCCAGTTCGGCCGTGCGTGCCCTCTCGCTGGAGTACAAAAGCCTGCAGG 958
                                                                                  

consensus_9126#1      AACTTTTCCACCAGATGGATCGTCTGCTCCACATCGGCACACGCTCCGCCGACGATGCCA 884
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      AGGAACCGGTCGAAGGGTTCCGCGTGAAGCTGCTGAACGAGGACAATCTGTTCGAGTGGG 1018
                                                                                  

consensus_9126#1      CGAACACGCAGATGTAGTTGTGCAGGAACTTGCCCGCCAGCTCCTGGATTTCGGC----- 939
consensus_9126#3      ------------------------------------------------------------
consensus_9126#2      ------------------------------------------------------------
consensus_9126#0      AGGTGGCCATCTTCGGGCCGCCGGACACGCTCTACCAGGGCGGCTACTTCAAGGCGCACA 1078
                                                                                  

consensus_9126#1      ----------------------
consensus_9126#3      ----------------------
consensus_9126#2      ----------------------
consensus_9126#0      TGAAATTTCCCCCAGACTATCC 1100