These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1779 fasta sequence [CCGGACCGGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC-GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGC-TGAAGCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTG-CCGGTGGCTCATCCAACGGGCTGCTGATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCGCTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCCCTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTTAGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGTGAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGACTTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGCGCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTTTCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAACGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGGGAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAAGTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAGGAAACGTGGATCGCTTAGTAATAA-AAGTAAGAACTTTCTTTTGTA] [+] EMBL BM640074 [CCGGAAAAGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCG ] [+] EMBL BM579119 [ CCGGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGT ] [+] EMBL BM616413 [ CCGGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAACAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGCGGGGCAGG ] [+] EMBL CNS08U6B [ GAGCGTG ATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCTGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGC TGAAGCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTG CCGGTGGCTCATCCAACGGGCTGCTGATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCAC ] [+] EMBL CNS08GQB [ TGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGC TGAAGCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCc ] [+] EMBL BM579880 [ ccgGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTTGAAGCCGCTGTTCCACAAGATGACGCGCAA ] [+] EMBL BM592249 [ ccgGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTGCCCGGTGGCTCATCCAACGGGCTGCTGATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTC ] [-] EMBL CNS08U6C [ GGCTGCTGATGGATGGGGAGGAGGAGGGGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCGCTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCCCTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTTAGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGTGAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGACTTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGCGCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTTTCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAACGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGGGAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAAGTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAGGAAACGTGGATCGCTTAGTAATAA AAGTAAGAACTTTCTTTTGTA] [-] EMBL CNS08GQC [ GGGGGGCGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCGCTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCCCTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTTAGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGTGAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGACTTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGCGCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTTTCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAACGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGGGAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAAGTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAGGAAACGTGGATCGCTTAGTAATAACAAGTAAGAACTTTC ] consensusID : consensus_9137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 935 fasta sequence [GTGATGCTCGAGCAGAATCGCCAGACGGNNTAAAAAGCGCTGAGCGCGTATGTCTGATGTTTTGCACTTTTCTTTGTCGTAGTCGCGCGTGTATTTTACGGCAAGGTAAAAACCCCACTTTAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTTTGGTGACTCGATCGGTACAC-GGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTGCACCACCACGAC-GGGCATTGTTGTGTGT-CCGTGTCCCTTCACGGCGTATTGC-GCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGG-TCCGGCAGCTC-CTA-GCGG-CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG-AAAACTCCCCCAACCTCGG-GCGGTACGATGG-CAAAGGTGCAC-ATCACGAACGTGG-T-GGTGCTGGACAATCCCA-GC--AGCTTCCTGAACCCG-TTCCAGTTCGAGCTGACGTTCGAGTGCA-TCGA-GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAGCCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTGCCCGGTGGCTC] [+] EMBL AL696591 [GTGATGCTCGAGCAGAATCGCCAGACGGNNTAAAAAGCGCTGAGCGCGTATGTCTGATGTTTTGCACTTTTCTTTGTCGTAGTCGCGCGTGTATTTTACGGCAAGGTAAAAACCCCACTTTAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTTTGGTGACTCGATCGGTACACTGGCGGAAGCTGTGCAGCACAAGTGAAATCACA CACAGTGCACCA CA GACGGGGCATTGTTGTGTGTNCCGTGTCCCTTCACGGCGTATTGCGGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTTCCGGCAG TCACTAGGCGGCCAGTTCCCGGGTACCAGGGGCTTTGCGTTACCTGTCGAGTCGTGATCGTGGCAAGTGACCGAAAAACTCCCCCAA CTCGGAGCGGTACGATGGCCAACGGTGCACNATCA GAACGTGGATCGGTGCTGGACAATCCCANGCAGAGCTTCCTGAACCCGTTTCCAGTNCGAGCTGACGTTCGAGTGCACTCGAGGGAGCTGAAGG ] [+] EMBL BX604407 [ TATTTTACGGCAAGGTAAAAACCCCACTTTAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTTTGGTGACTCGATCGGTACAC GGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTGCACCACCACGAC GGGCATTGTTGTGTGT CCGTGTCCCTTCACGGCGTATTGC GCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGG TCCGGCAGCTC CTA GCGG CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG AAAACTCCCCCAACCTCGG GCGGTACGATGG CAAAGGTGCAC ATCACGAACGTGG T GGTGCTGGACAATCCCA GC AGCTTCCTGAACCCG TTCCAGTTCGAGCTGACGTTCGAGTGCA TCGA GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCG ] [+] EMBL BM598552 [ ccgcgGACGCG TGGG CAC GGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTGCACCACCACGAC GGGCATTGTTGTGTGT CCGTGTCCCTTCACGGCGTATTGC GCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGG TCCGGCAGCTC CTA GCGG CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG AAAACTCCCCCAACCTCGG GCGGTACGATGG CAAAGGTGCAC ATCACGAACGTGG T GGTGCTGGACAATCCCA GC AGCTTCCTGAACCCG TTCCAGTTCGAGCTGACGTTCGAGTGCA TCGA GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAGCCCGCTGTTCCACAAGA ] [+] EMBL BX606285 [ AGG TCCGGCAGCTC CTA GCGG CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG AAAACTCCCCCAACCTCGG GCGGTACGATGG CAAAGGTGCAC ATCACGAACGTGG T GGTGCTGGACAATCCCA GC AGCTTCCTGAACCCG TTCCAGTTCGAGCTGACGTTCGAGTGCA TCGA GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAG CCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTGCCCGGTGGCTC] consensusID : consensus_9137#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 578 fasta sequence [GGCCAAGAATCGGCACGTGGAGATCGTGGCAAGTGACCGAAACACTCCCCCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCGCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCGTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAAGCGAGTACGCCGATCCGGAGCTGCGCGAAGAACCCACCGCTGAAGCCGCGTGTTCCACAAGATGACGCGCAACATACTGGCGGTCGAAGCCGCGCGTCAACCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAAACGGGGAGGGTGACCCGGTGGNTCCATCG] [+] EMBL BX467899 [GGCCAAGAATCGGCACGTGGAGATCGTGGCAAGTGACCGAAACACTCCCCCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCGCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCGTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAAGCGAGTACGCCGATCCGGAGCTGCGCGAAGAACCCACCGCTGAAGCCGCGTGTTCCACAAGATGACGCGCAACATACTGGCGGTCGAAGCCGCGCGTCAACCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAAACGGGGAGGGTGACCCGGTGGNTCCATCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9137#1 GTGATGCTCGAGCAGAATCGCCAGACGGNNTAAAAAGCGCTGAGCGCGTATGTCTGATGT 60 consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 ----------------------------CCGGACCGGCGCTGAGCGCGTATGT-TGATGT 31 consensus_9137#1 TTTGCACTTTTCTTTGTCGTAGTCGCGCGTGTATTTTACGGCAAGGTAAAAACCCCACTT 120 consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 TTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTT 91 consensus_9137#1 TAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTT 180 consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 TTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTT 151 consensus_9137#1 TGGTGACTCGATCGGTACACGGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTG 240 consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 TGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTG 211 consensus_9137#1 CACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCACGGCGTATTGCGCGTGTAG 300 consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 CACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAG 271 consensus_9137#1 AGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCTAGCGGCAGTTCCCGGG 360 consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 AGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGG 331 consensus_9137#1 TCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCGAAA-ACTCCC 419 consensus_9137#2 -------GGCCAAGAATC----GGCACGTGGAGATCGTGGCAAGTGACCGAAACACTCCC 49 consensus_9137#0 TCCCGGGTGCTTTGCGTTTCCTGTCTTGT---GATCGTTGGAACTGAC------------ 376 ** * * * * ** ****** * ** **** consensus_9137#1 CCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAAT 479 consensus_9137#2 CCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAAT 109 consensus_9137#0 ------------GGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAAT 424 ************************************************ consensus_9137#1 CCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTG 539 consensus_9137#2 CCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTG 169 consensus_9137#0 CCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTG 484 ************************************************************ consensus_9137#1 AAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGAC 599 consensus_9137#2 AAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGAC 229 consensus_9137#0 AAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGAC 544 ************************************************************ consensus_9137#1 CAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGC-CACATCTTCGTCTT 658 consensus_9137#2 CAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCGCACATCTTCGTCTT 289 consensus_9137#0 CAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGC-CACATCTTCGTCTT 603 ********************************************* ************** consensus_9137#1 CCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGT 718 consensus_9137#2 CCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGT 349 consensus_9137#0 CCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGT 663 ****************** ***************************************** consensus_9137#1 GGTGCTGC-TGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCA 777 consensus_9137#2 GGTGCTGCGTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCA 409 consensus_9137#0 GGTGCTGC-TGACCTGCTCCTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCA 722 ******** ********** **************************************** consensus_9137#1 ACAA-CGAGTACGCCGATCCGGAGCTGCGCGAA-AACCCACCGCTGAAGCCCGCTGTTCC 835 consensus_9137#2 ACAAGCGAGTACGCCGATCCGGAGCTGCGCGAAGAACCCACCGCTGAAGCCGCGTGTTCC 469 consensus_9137#0 ACAA-CGAGTACGCCGATCCGGAGCTGCGCGAA-AACCCACCGCTGAAGCCGC-TGTTCC 779 **** **************************** ***************** ****** consensus_9137#1 ACAAGATGACGCGCAACATACTGGCG-TCGAAGCCGCGCGTCACCCGCTTCAAGATCAAC 894 consensus_9137#2 ACAAGATGACGCGCAACATACTGGCGGTCGAAGCCGCGCGTCAACCGCTTCAAGATCAAC 529 consensus_9137#0 ACAAGATGACGCGCAACATACTGGCG-TCGAAGCCGCGCGTCACCCGCTTCAAGATCAAC 838 ************************** **************** **************** consensus_9137#1 TGGGACGATGCGCCGGCGAAC--GGGGGGGTG-CCCGGTGGCTC---------------- 935 consensus_9137#2 TGGGACGATGCGCCGGCGAAACGGGGAGGGTGACCCGGTGGNTCCATCG----------- 578 consensus_9137#0 TGGGACGATGCGCCGGCGAAC--GGGGGGGTG--CCGGTGGCTCATCCAACGGGCTGCTG 894 ******************** *** ***** ******* ** consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 ATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGT 954 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 GGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCAC 1014 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 CCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGAC 1074 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 GACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCG 1134 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 CTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCC 1194 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 CTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTT 1254 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 AGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGT 1314 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 GAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGAC 1374 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 TTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGC 1434 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 GCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTT 1494 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 TCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAA 1554 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 CGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGG 1614 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 GAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAA 1674 consensus_9137#1 ------------------------------------------------------------ consensus_9137#2 ------------------------------------------------------------ consensus_9137#0 GTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAG 1734 consensus_9137#1 --------------------------------------------- consensus_9137#2 --------------------------------------------- consensus_9137#0 GAAACGTGGATCGCTTAGTAATAAAAGTAAGAACTTTCTTTTGTA 1779 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||