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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9145#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1425 fasta sequence
[CAAGAATCGGCCGAGGCTNACCCACGCGTGTACTGTAGGCTTCGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGGCGTACTAGGACGTTCTGCTATTCGACGGGGTANGGGAATTAACGAGTTCACGGTTTCCATTAATTTTGGTTAACTGGGGGCAGAAAAAAAGTTGGAAAACCGAAACCCTGGGGCCTTTTTGGTTATTGGACCGGTTTCCTCTATTATTTCGGAGTGGGCAATACNGGGGTCCCGGTTTCANTNTTTCGTTGAAACGGTTNCCCCCTTTGGGGGGAAACCCANNTTAGCCAGGGGGTATATCCANCCACAGGAGGGGGTTGGGGGCGCCCACATTTCCGGGAAAATTTCNCAACGGGAACAACTTATTCTGTGGTGACAANCAAGTTGTTGTTTCCCCCGGGGAATGNAAGTCAGAAGTNTATGTGTTAGGCGCTTATTCGGCAACAANTTGGACACATTTNGAAGAACAACGTTTTTGTNNGTGATCTATGACAGGTCGTNTAACACGGCCCTTACTGGCTTTGGTTTGGAACACCGGGGGGGGCCCGCACATTTTTTGGCGCGGGGGGGCACAAGAGGGGAATTTGGGGAAGAAGACCGAGGNGCGTGCCAAATTAGGAGAACAAGTTTTGAAGCGTTCCCGAAGTTTACAAAAANTAGTAAGACCANANTGTGGGGGGAACACTTTCAACAAACAACACAAACGGGGTTCTTTCACTATTTTTCANACGAGTTTNTGCAAAAAACAACTTTGTGCAACATATTTTTCTTTCAAAGAACCCCCCAAAAGTTCTAATCTTTCACAAACGTTCAGGGTGTCCCCCTTCTACACAAGCAGTTTTCACCCTCTTTTGGGGCACAATTTTTGGGGGGGAAACNGGGTTTTAGTGGGTCNACCCCANAAGAGCCCNGAAGCCACACGTATGGTTNTGCATGNGGGNAACAGGAAGAAAACGCCCCCGCANAGTNTGAGTGAATGAATACTAGTAATGNGGGGGCGGCCCCANACTTTTGTGGGGACAACGCANATCAGTGTAGTCGGGTGGCGTGTGAACAGAGTCTGCCCTCGCCCGCCAGCAGGCGACNCACGTTGCTGTGTTCCTACGNGGGGTAGATGGTNATAAGACGCCGCACACCAGCAGAGAGAAGGANCCAGGCCC]
[+] EMBL BX468559 [CAAGAATCGGCCGAGGCTNACCCACGCGTGTACTGTAGGCTTCGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGGCGTACTAGGACGTTCTGCTATTCGACGGGGTANGGGAATTAACGAGTTCACGGTTTCCATTAATTTTGGTTAACTGGGGGCAGAAAAAAAGTTGGAAAACCGAAACCCTGGGGCCTTTTTGGTTATTGGACCGGTTTCCTCTATTATTTCGGAGTGGGCAATACNGGGGTCCCGGTTTCANTNTTTCGTTGAAACGGTTNCCCCCTTTGGGGGGAAACCCANNTTAGCCAGGGGGTATATCCANCCACAGGAGGGGGTTGGGGGCGCCCACATTTCCGGGAAAATTTCNCAACGGGAACAACTTATTCTGTGGTGACAANCAAGTTGTTGTTTCCCCCGGGGAATGNAAGTCAGAAGTNTATGTGTTAGGCGCTTATTCGGCAACAANTTGGACACATTTNGAAGAACAACGTTTTTGTNNGTGATCTATGACAGGTCGTNTAACACGGCCCTTACTGGCTTTGGTTTGGAACACCGGGGGGGGCCCGCACATTTTTTGGCGCGGGGGGGCACAAGAGGGGAATTTGGGGAAGAAGACCGAGGNGCGTGCCAAATTAGGAGAACAAGTTTTGAAGCGTTCCCGAAGTTTACAAAAANTAGTAAGACCANANTGTGGGGGGAACACTTTCAACAAACAACACAAACGGGGTTCTTTCACTATTTTTCANACGAGTTTNTGCAAAAAACAACTTTGTGCAACATATTTTTCTTTCAAAGAACCCCCCAAAAGTTCTAATCTTTCACAAACGTTCAGGGTGTCCCCCTTCTACACAAGCAGTTTTCACCCTCTTTTGGGGCACAATTTTTGGGGGGGAAACNGGGTTTTAGTGGGTCNACCCCANAAGAGCCCNGAAGCCACACGTATGGTTNTGCATGNGGGNAACAGGAAGAAAACGCCCCCGCANAGTNTGAGTGAATGAATACTAGTAATGNGGGGGCGGCCCCANACTTTTGTGGGGACAACGCANATCAGTGTAGTCGGGTGGCGTGTGAACAGAGTCTGCCCTCGCCCGCCAGCAGGCGACNCACGTTGCTGTGTTCCTACGNGGGGTAGATGGTNATAAGACGCCGCACACCAGCAGAGAGAAGGANCCAGGCCC]
consensusID : consensus_9145#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1124 fasta sequence
[TTTTTTCGCTTTTCACGTTTATGGAAATGAACCGAATTACCCAAGCCTACAGTACACGCGTGGGTGAGTTTTTATTTTAATTTCTAAACGTGTTTAAGTCCAAGTAGTAATTTTAATTCACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTT--AAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGTACACGGGCACTTGCCAGCTCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCA-CGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTCTGCAGCTCCAGGTT-GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTTT-GG-TGGCG-CCCGCCTC-GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC-GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG-CCTG-TGCGCTGGTGCACGTTGGCGCCGCGAAACG-TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG-TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT-CCGGG-CCAG-CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATCGACGATGCG]
[+] EMBL CNS08PNK [TTTTTTCGCTTTTCACGTTTATGGAAATGAACCGAATTACCCAAGCCTACAGTACACGCGTGGGTGAGTTTTTATTTTAATTTCTAAACGTGTTTAAGTCCAAGTAGTAATTTTAATTCACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTT AAAAAAAAAC ]
[+] EMBL CNS08PIF [ acacAATT CCCAAGCCTACAGTACACGCGTGGGTGAGTTTTTATTTTAATTTCTAAACGTGTTTAAGTTCAAGTAGTAATTTTAATTCACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTTAAAAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGTACACGGGCACTTGCCAGCTCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCA GGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTCTGCAGCTCCAGGTTGGCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTCG GGCTGGCGCCCCGCCTC GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTGCTGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCACCCGGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGA ]
[+] EMBL CNS08LFB [ GACAGCAACAAATGACCTCGCAATCCTCGCTCGTGGAGTATTT AAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGGACACGGGCACTTGCCAGCCCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCA CGAGCGGGACGCCAGGgc ]
[-] EMBL CNS08PNJ [ TCGCAATCCTCGCTCGTGGAGTATTT AAAAAAAAACACACACACAGACATAATAGGGTGCGCGTGCGGTACACGGGCACTTGCCAGCTCGTAACGTAACGCTCTTAAATCTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCAGCGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTCTGCAGCTCCAGGTT GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTTTCGG TAAAG CCCGCCTC GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTG TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGT TACAGCGCCCAT ]
[-] EMBL CNS08PIE [ CTAACACCGCCATCTGACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGCGCAGCGAGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCGGTTTTGCAGCTCCAGGTT GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGATTT GG TGGCG CCCGCCTC GATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGCTGGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTC TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAGTCTCGTAGAAAAACGTGCTCTTGCTGCTCATCGTGCGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGcat ]
[-] EMBL CNS08TZV [ GTTTTTTTGTACCGGTTCTGCAGCTCCAGGTT GCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGTGCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGATTT GG TGGCG CCCGCCTCGGATCAGCAGCCCGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTG TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCCACTC CCGGG CCAG CTCGTACAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACAACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATCGA ]
[-] EMBL BM583773 [ AGCAGCCCGATCAGCTCGGTCGACCCGATGGCAGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGGGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCCCG CCTGCTGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATGGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCCGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGgtgcgg ]
[-] EMBL CNS08LFA [ CGATCAGCTCGGTCGACCCGATGGCGGTGGCCCGGTGCAGCGGCGTCTCGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCGCCCTG TGCGCTGGTGCACGTTGGCGCCGCGAAACG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCGATCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATCGACGATGCG]
[-] EMBL CNS08G0V [ CCGGTGCAGCGGCGTCTCGTTCAGGTAATCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGGC GGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCG CCTG TGCGCTGGTGCACGTTGGCGCCGCGAAAGG TCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGACTCCAGCTACGATGAGACGGCTATTTGCCTGT ]
[-] EMBL CNS08FUE [ TGCACGTTGGCGCGGCG ACCGCACAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGCCAGTATTAGCGGCGTCAGCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCGCTCGAGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGAGCAGCCGTTCGCTCTCG TCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTTCCCGGGACCAG CTCGTAGAAAAACGTGCTCTTGCAACTCATG ]
[-] EMBL CNS08ULE [ CCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCTGTATTTCGTTCTCCGACTT CCGGG CCAG CTCGTAGAAAAACGTGCTCTTGCTGCTCATGCTGTGCGTAGTTGGTTTGTTGGTTG ]
consensusID : consensus_9145#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 752 fasta sequence
[GCACCCTATTATGTCTGTGTGTGTGCTTTTTTTTAAATACTCCACGAGCGAGGATTGCGAGGTCATTTGTTGCTGTCAGCGAGTAGAAGCAGCATCTGAGCATCATCCAAACAGTGAATTAAAATTACTACTTGAACTTAAACACGTTTAGAAATTAAAATAAAAACTCACCCACGCGTGTACTGTAGGCTTGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGCGTACTAGGACGTTCTGCTATTCGACGGGTAGGATTACGATTCACGTTCATATTTGTATGGGAGAAAATGAACGACCTGGCTTTGTATGACGTTCTTTATTTCGATGGATAGGTCGTTCATTTCGTGAACGTCCTGGACATACGGTTCACAGGGTGGCCATTCGAATCAGAATTTTTAAAATCCGTTTTTTTTTTGCTTTTGAATGAATGAAACTTTTTTAGTTTACGCCTCGTGTGACGGGCATTGCGGCAAAGATGAACGCTCATAAATACTCATAA]
[+] EMBL BX606495 [GCACCCTATTATGTCTGTGTGTGTGCTTTTTTTTAAATACTCCACGAGCGAGGATTGCGAGGTCATTTGTTGCTGTCAGCGAGTAGAAGCAGCATCTGAGCATCATCCAAACAGTGAATTAAAATTACTACTTGAACTTAAACACGTTTAGAAATTAAAATAAAAACTCACCCACGCGTGTACTGTAGGCTTGGGTAATTCGGTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTATATGAACTGAACGTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAATGCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATTATTTGGCAGACCATCTTTAATTCGACGTGTAGGATGTTCTTTTCGTGAACGATCTGGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAACGACCTCGCGTACTAGGACGTTCTGCTATTCGACGGGTAGGATTACGATTCACGTTCATATTTGTATGGGAGAAAATGAACGACCTGGCTTTGTATGACGTTCTTTATTTCGATGGATAGGTCGTTCATTTCGTGAACGTCCTGGACATACGGTTCACAGGGTGGCCATTCGAATCAGAATTTTTAAAATCCGTTTTTTTTTTGCTTTTGAATGAATGAAACTTTTTTAGTTTACGCCTCGTGTGACGGGCATTGCGGCAAAGATGAACGCTCATAAATACTCATAA]
consensusID : consensus_9145#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence
[AGAATTGCCCGAGGTGCCGTCTCATCGTAGCTGGAGTNGTAACTGAAGCTGAAATCCTCACAACTCCAGCCCAACCAACAAACCAACTACGCACAGCATGAGCAGCAAGAGCACGTTTTTCTACGAGCTGGCCCGGAAGTCGGAGAACGAAATACAGGCGACGCTGATGCGCTGCCCGAGCCACATTACCGATGCGGGACGAGAGCGAACGGCTGCTCATCCACTGGGCGGCACTCGTCGGCCAGGAGCGGCTCGTCGAGTCCATCCTCGAGCGGCACCCGGACCAGCTGAACGCGGAGGACGATGCCTGGGCTGACGCCGCTAATACTGGCCACGCTCGGTCGCCATCCGGCAATCGTCACCATGCTGACGTTTCGCGGCGCCAACGTGCACCAGCGCAGCAGGCGAGGCCATTCGGCGCTGCAGTACGCCTGCTCGAAGAACCAGCCCGCCATCGCACGGCACCTGGTGCAGCTCTGGCGCGAACGTGGACGTGGTGGACTACCTGAACGAGACGCCGCTGCA]
[+] EMBL AL931784 [AGAATTGCCCGAGGTGCCGTCTCATCGTAGCTGGAGTNGTAACTGAAGCTGAAATCCTCACAACTCCAGCCCAACCAACAAACCAACTACGCACAGCATGAGCAGCAAGAGCACGTTTTTCTACGAGCTGGCCCGGAAGTCGGAGAACGAAATACAGGCGACGCTGATGCGCTGCCCGAGCCACATTACCGATGCGGGACGAGAGCGAACGGCTGCTCATCCACTGGGCGGCACTCGTCGGCCAGGAGCGGCTCGTCGAGTCCATCCTCGAGCGGCACCCGGACCAGCTGAACGCGGAGGACGATGCCTGGGCTGACGCCGCTAATACTGGCCACGCTCGGTCGCCATCCGGCAATCGTCACCATGCTGACGTTTCGCGGCGCCAACGTGCACCAGCGCAGCAGGCGAGGCCATTCGGCGCTGCAGTACGCCTGCTCGAAGAACCAGCCCGCCATCGCACGGCACCTGGTGCAGCTCTGGCGCGAACGTGGACGTGGTGGACTACCTGAACGAGACGCCGCTGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9145#0 ------------------------------------------------------------
consensus_9145#2 -------------------------------------------GCACCCTATTATGTCTG 17
consensus_9145#1 TTTTTTCGCTTTTCACGTTTATGGAAATGAACCGAATTACCCAAGCCTACAGTACACGCG 60
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 ------------------------------------------------------------
consensus_9145#2 TGTGTGTGCTTTTTTTTAAATACTCCACGAGCGAGGATTGCGAGGTCATTTGTTGCTGTC 77
consensus_9145#1 TGGGTGAGTTTTTATTTTAAT-TTCTAAACGTGTTTAAGTCCAAGTAGTAATTTTAATTC 119
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 ------------------------------------------------------------
consensus_9145#2 AGCGAGTAGAAGCAGCATCTGAGCATCATCCAAACAGTGAATTAAAATTACTACTTGAAC 137
consensus_9145#1 ACTGTTTGGATGATGCTCAGATGCTGCTTCTACTCGCTGACAGCAACAAATGACCTCGCA 179
consensus_9145#3 -------AGAATTGCCCGAGGTGCCGTCTCATCGTAGCTGGAGTNGTAACTGAAGCTGAA 53
consensus_9145#0 -----------CAAGA-ATCGG--CCGAGGCTNACCCACGCGTGTACTGTAGGCTTCGGG 46
consensus_9145#2 TTAAACACGTTTAGAA-ATTAAAATAAAAACTCACCCACGCGTGTACTGTAGGCTT-GGG 195
consensus_9145#1 ATCCTCGCTCGTGGAGTATTTAAAAAAAAACACACACACAGACATAATAGGGTGCGCGTG 239
consensus_9145#3 ATCCTCACAACTCCAG--CCCAACCAACAAACCAACTACGCACAGCAT---------GAG 102
* ** * * *
consensus_9145#0 TAATTCG-GTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTA-TATGAACTGA 104
consensus_9145#2 TAATTCG-GTTCATTTCCATAAACGTGAACGTACTAGTTCTTTCAATTA-TATGAACTGA 253
consensus_9145#1 CGGTACACGGGCACTTGCCAGCTCGT-AACGTAACGCTCTTAAATCTAA-CACCGCCATC 297
consensus_9145#3 CAGCAAGAGCACGTTTTTCTACGAGCTGGCCCGGAAGTCGGAGAACGAAATACAGGCGAC 162
* * ** * * * * * *
consensus_9145#0 AC-GTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAAT 163
consensus_9145#2 AC-GTCGCGAATCGCGATTCATTCGTTCATTTCAGTTTATCAAAAAAAAATTGGTTTAAT 312
consensus_9145#1 TG-ACCCCTTACTCTAACCCGCCTGGCGCCTACTTGCGACCGACGCGGACAGCACCTGGC 356
consensus_9145#3 GCTGATGCGCTGCCCGAGCCACATTACCGATGCGGG--ACGAGAGCGAACGGCTGCTCAT 220
* * * * * * * *
consensus_9145#0 GCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATT---A 220
consensus_9145#2 GCATGCAAAATGGTTTAATTTTGCAAGAGAAATTACTCTATTACATTTTGAAAATT---A 369
consensus_9145#1 GCACG-AGCGGGACGCCAGGTCGAGCGGCGTCTTTTCGTACCG-GTTCTGCAGCTCCAGG 414
consensus_9145#3 CCACTGGGCGGCACTCGTCGGCCAGGAGCGGCTCGTCGAGTCC-ATCCTCGAGC------ 273
** * * * *
consensus_9145#0 TTTGGCAGACCATCTTTAATTCGA-CGTGTA-----GGATGTTCTTTTCGTGAACGATCT 274
consensus_9145#2 TTTGGCAGACCATCTTTAATTCGA-CGTGTA-----GGATGTTCTTTTCGTGAACGATCT 423
consensus_9145#1 TTGCGCCGCCCCGCACCAGCTCGAGCGCACACTCCTGCTTGTCCTCCTCGCAGGCCATGT 474
consensus_9145#3 ---GGCA--CCCGGACCAGCTGAA-CGCGGA-----GGACGATGCCTGGGCTGACG--CC 320
** ** * * * ** * * * * *
consensus_9145#0 GGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAA--CGACCTCGGCGTACTA 332
consensus_9145#2 GGTCATACGGTTCACGTTCATATTTGTATTGGATGAGATGAA--CGACCTCG-CGTACTA 480
consensus_9145#1 GCAGGGGCGTGTTGCCCTCGCTGTTCGGTATGTTTTGGTGGCGCCCGCCTCGAT-CAGCA 533
consensus_9145#3 GCTAATACTGGCCACGCTCGGTCGCCATCCGGCAATCGTCA---CCATGCTGACGTTTCG 377
* * * ** * * * *
consensus_9145#0 GGACGTTCTGCT-ATTCGACGGGGTANGGGAATTAACGAGTTCACGGTTTCCATTAATTT 391
consensus_9145#2 GGACGTTCTGCT-ATTCGACGGG-TAGGA------------TTACGATTCACGTTCATAT 526
consensus_9145#1 GCCCGATCAGCTCGGTCGACCCGATGGCGGTG---------GCCCGGTGCAGCGGCGTCT 584
consensus_9145#3 CGGCGCCAACGTGCACCAGCGCAGCAGG--------------CGAGGCCATTCGGCGCTG 423
** * * * *
consensus_9145#0 TGGTTA-ACTGGGGGCAGAAAAAAAGTTGGAAAACCGAAACCCTGGGGCCTTTTTGGTTA 450
consensus_9145#2 TTGT---ATGGGAGAAAATGAACGACCTGGCTTTGTATGACGTTCT--TTATTTCGATGG 581
consensus_9145#1 CGTTCAGGTAGTCCACCACGTCCACGTTCGCGCCGAGCTGCACCAGGTGCCGTGCGATGG 644
consensus_9145#3 CAGT-ACGCCTGCTCGAAGAACCAGCCCGCCATCGCACGGCACCTGGTGCAGCTC--TGG 480
* * *
consensus_9145#0 TTGGACCGGT--TTCCTCTATTATTTCGGAGTGGGCAATACNGGGGTCCCGGTTTCANTN 508
consensus_9145#2 ATAGGTCGTTCATTTCGTGAACGTCCTGGACATACGGTTCACAGGGTGGCCATTCGAATC 641
consensus_9145#1 CGGGCTGGTTCTTCGAGCAGGCGTACTGCAGCGCCGAATGGCCTCGCCTGTGCGCTGGTG 704
consensus_9145#3 CGCGAACGT---------GGACGTGGTGGACTACCTGAACGAGACGCCGCTGCA------ 525
* * * * * *
consensus_9145#0 TT--TCGTTGAAACGGTTNCCCCCTTTGGGGGGAAACCCANNTTAGCCAGGGGGTATATC 566
consensus_9145#2 AGAATTTTTAAAATCCGTTTTTTTTTTGCTTTTGAATGAATGAAACTTTTTTAGTTTACG 701
consensus_9145#1 CACGTTGGCGCCGCGAAACGTCAGCATGGTGACGATTGCCGGATGGCGACCGAGCGTGGC 764
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 CANCCACAGGAGGGGGTTGGGGGCGCCCACATTTCCGGGAAAATTTCNCAACGGGAACAA 626
consensus_9145#2 CCTCGTGTGACGGGCATTGCGGCAAAGATGAACGCTCATAAATACTCATAA--------- 752
consensus_9145#1 CAGTATTAGC--GGCGTCA-GCCCGGCATCGTCCTCCGCGTTCAGCTGGTCCGGGTGCCG 821
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 CTTATTCTGTGGTGACAANCAAGTTGTTGTTTCCCCCGGGGAATGNAAGTCAGAAGTNTA 686
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 CTCG----AGGATGGACTCGACGAGCCGCTCCTGGCCGACGAGTGCCGCCCAGTGGATGA 877
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 TGTGTTAGGCGCTTATTCGGCAACAANTTGGACACATTTNGAAGAACAACGTTTTTGTNN 746
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 GCAGCCGTTCGCTCTCGTCCCGCTCGGTAATGTGGCTCGGGCAGCGCATCAGCGTCGCCT 937
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 GTGATCTATGACAGGTCGTNTAACACGGCCCTTACTGGCTTTGGTTTGGAACACCGGGGG 806
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 GTATTTCGTTCTCCGACTTCCGGGCCAGCTCGTAGAAAAACGTGCTCTTGCTGCTCATGC 997
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 GGGCCCGCACATTTTTTGGCGCGGGGGGGCACAAGAGGGGAATTTGGGGAAGAAGACCGA 866
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 TGTGCGTAGTTGGTTTGTTGGTTGGGCTGGAGTTGTGAGGATTTCAGCTTCAGTTACGAC 1057
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 GGNGCGTGCCAAATTAGGAGAACAAGTTTTGAAGCGTTCCCGAAGTTTACAAAAANTAGT 926
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 TCCAGCTAC--GATGAGACGGCTATTTGCCTGTGTTGCTCGTTGGTGTACAACCACCATC 1115
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 AAGACCANANTGTGGGGGGAACACTTTCAACAAACAACACAAACGGGGTTCTTTCACTAT 986
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 GACGATGCG--------------------------------------------------- 1124
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 TTTTCANACGAGTTTNTGCAAAAAACAACTTTGTGCAACATATTTTTCTTTCAAAGAACC 1046
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 ------------------------------------------------------------
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 CCCCAAAAGTTCTAATCTTTCACAAACGTTCAGGGTGTCCCCCTTCTACACAAGCAGTTT 1106
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 ------------------------------------------------------------
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 TCACCCTCTTTTGGGGCACAATTTTTGGGGGGGAAACNGGGTTTTAGTGGGTCNACCCCA 1166
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 ------------------------------------------------------------
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 NAAGAGCCCNGAAGCCACACGTATGGTTNTGCATGNGGGNAACAGGAAGAAAACGCCCCC 1226
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 ------------------------------------------------------------
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 GCANAGTNTGAGTGAATGAATACTAGTAATGNGGGGGCGGCCCCANACTTTTGTGGGGAC 1286
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 ------------------------------------------------------------
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 AACGCANATCAGTGTAGTCGGGTGGCGTGTGAACAGAGTCTGCCCTCGCCCGCCAGCAGG 1346
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 ------------------------------------------------------------
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 CGACNCACGTTGCTGTGTTCCTACGNGGGGTAGATGGTNATAAGACGCCGCACACCAGCA 1406
consensus_9145#2 ------------------------------------------------------------
consensus_9145#1 ------------------------------------------------------------
consensus_9145#3 ------------------------------------------------------------
consensus_9145#0 GAGAGAAGGANCCAGGCCC 1425
consensus_9145#2 -------------------
consensus_9145#1 -------------------
consensus_9145#3 -------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||