These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9155#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2458 fasta sequence [TCGTGACGCCCTGCAAGCTGGGCATCCCGAGCTTTGCCAAGTACCTGGCGTCGCATCCGTGTGATGTGTTCCACCATCTGTTCATTGGCTCGTACGGACTGGTCGTTATATCGTATCTTCGAGGCGGGTTGGGAGATTGCGTGTTTAGCTTCATGTTCATGATGGAGCTGTCCACACCGTTCGTGTCATTCCGTAGCATTCTCAGCGTGATGGGATTGAAACAGTCGAAGCTGTACGTCATCAATGGGCTGGTGATGCTGGTCACGTTCTTCTGGTGCCGCGTCTTTCTAATGCCGTACGTGTGCTACTACTACAGTCAGGTAGTGAACAAACCATTCCTAGAGGCTGTGTGGAACTTACCGTGGGGATGTAAGGTGAGCATTTTGGCACTGTTTTTGCCACAGCTCTACTGGTTCCGGTTAATGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAACAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTGCACACCGAGGATAGGTGCAGGGTGTGTATGTGGATAC-CGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTG-TAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCAGGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAACAAGGGAGAATCAGGTGTTTTCCAAAGCCAGGGAGGGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACAGATAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGTTTTTTTGGTTCG-TTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAGTGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAA--AAAGGGTTTCTTGCCAGTCGAT-CCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGATAG-GTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGAAACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACCCACACACACACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAGAGGGGCATTCCACGGAACGGAAGCACACTGCATTATTACTTATATATATATACAGCGAACAACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACA----AAAC-AAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAGATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC-------AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACA-CGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACACACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATTGACTTTGAAACAATCGTGTGTCTTTGTAATGTTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGCAAAGTGGCGAGAAGCGCACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATTTACATAAAATAATAT] [-] EMBL CNS09BNB [TCGTGACGCCCTGCAAGCTGGGCATCCCGAGCTTTGCCAAGTACCTGGCGTCGCATCCGTGTGATGTGTTCCACCATCTGTTCATTGGCTCGTACGGACTGGTCGTTATATCGTATCTTCGAGGCGGGTTGGGAGATTGCGTGTTTAGCTTCATGTTCATGATGGAGCTGTCCACACCGTTCGTGTCATTCCGTAGCATTCTCAGCGTGATGGGATTGAAACAGTCGAAGCTGTACGTCATCAATGGGCTGGTGATGCTGGTCACGTTCTTCTGGTGCCGCGTCTTTCTAATGCCGTACGTGTGCTACTACTACAGTCAGGTAGTGAACAAACCATTCCTAGAGGCTGTGTGGAACTTACCGTGGGGATGTAAGGTGAGCATTTTGGCACTGTTTTTGCCACAGCTCTACTGGTTCCGGTTAATGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAACAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTGCACACCGAGGATAGGTGCAGGGTGTGTATGTGGATACGCGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTG TAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCA ] [+] EMBL BX603629 [ GTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACACACCGAGGATAGGTGCAGGGTGTGTGTGTGGATAC CGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCAGGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAACAAGGGAGAATCAGGTGTTTTCCAAAGCCAGGGAGGGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACAGATAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGTTTTTTTGGTTCG TTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAGTGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAAAGAAAGGGTTTCTTGCCAGTCGAT CCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGATAG GTTTTTTGTTGTTGA ] [+] EMBL CNS09QLF [ AGGTTCGATTTCAGCGTGCAGCTAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAATAAGGGAGAATCAGGTGTTTTCCAAGGCCAGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAATAGGTAGAACCGTGTGCTGCTGCTCAGTTTACTAGTCATAGTAGTTGCGTTTTTTTGGTTCGTTTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAGTGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAA AAAGGGTTTCTTGCCAGTCGATCCCAGCCCTGTACCTCCACAAAATG CGCGATTACCTTAAAGTAATGATAGTATGATAGTTTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGAAACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACCCACACACACACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAGAGGGGCATTCCACGGAACGGAAGCACACTGCATTATTACTTATATATATATACAGCGAACAACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACA AAAC AAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAGATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTTTTTTAAGAGGCGAACTGAGACGGTAGAAGGATTTAGGGAAGGGAGTGCAAAAGGGCATTGAGCAAA ] [+] EMBL BM591198 [ ccgcaaAAAG AAAGGGTTTCTTGCCAGTCGAT CCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGATAG GTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGAAACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACC CACACACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAGAGGGGCATTCCACGGAACGGAAGCGCACTGCATTATTACTTATATATATATACAGCGAACAACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACAAAACAAAC AAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACGGATTACATATTCTACTCCCGCCTCCTTCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGATTTAGTGAGAAGAATGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATCTAGTGAAGGTAGTGCAAAAGCGCAT CAAAAGCTGAACGAGGATGAGTGAA ] [-] EMBL CNS09QLG [ ACA AAACAAAAAAAAAAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAGATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACCGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACACACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATTGACTTTGAAACAATCGTGTGTCTTTGTAATGTTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGCAAAGTGGCGAGAAGCGCACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATTTACATAAAATAATAT] [+] EMBL BM628652 [ ccgATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAATGTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACGGATTACATATTCTACTCCCGCCTCCTTCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGATTTAGTGAGAAGAATGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATCTAGTGAAGGTAGTGCAAAAGCGCAT CAAAAGCTGAACGAGGATGAGTGAAACGATCAAACAGAAAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACA CGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTT ] [+] EMBL BX626322 [ gggcttcGTGGCGAGAAGCGCACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATTTACATAAAATAATAT] consensusID : consensus_9155#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 711 fasta sequence [CCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC-------AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGAATGATGCTAGGACACACACACAGACTGACCTGTGGGGTAGTTTTGAGACACACACAGACACACGCATTGGCTTACACAAGTTCGGACATCTTCACTCA-TAA-ACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATATGACTTTGAAACAATCGCGTGTTTTTTGTAATGTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGC] [+] EMBL BX623511 [CCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGAGGATGAGTGAAACGATC AAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACACACACACAGACTGACCTGTGGGGTAGTTTTGGGACACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTGGCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGT ] [+] EMBL BX611508 [ GGATGAGTGAAACGATCAAACAGAAAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATG TATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGAATGATGCTAGGACACACACACAGACTGACCTGTGGGGTAGTTTTGAGACACACACAGACACACGCATTGGCTTACACAAGTTCGGACATCTTCACTCA TAA ACATTGGCTGAGTAGGATTTAGTAGAGTTTGAGCGTAGGGGGGTGTAGCCGGGAGCAGTATTTCGATTTCGAAAGGAATGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATATGACTTTGAAACAATCGCGTGTTTTTTGTAATGTTGCACTTTGTCGAAGCGAAACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGC] [+] EMBL BM602536 [ ccgAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAGCAG ] [+] EMBL BX604845 [ GCGCGAAAAGAAGCGGTAGTAAGCGGCAAGGGAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGAAGGATGCTAGGACACACACACAGACGGACCTGTGGGGTAGTTTTGAGACACACACAGACACACGCATTGGCTTACACAAGTTCGGACATCTTCACTCA TAA ACAcat ] consensusID : consensus_9155#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence [CCGGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAAGAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACACACCGAGGATAGGTGCAGGGTGTGTGTGGATACCGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCGACCAGGCGGATCAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAATGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCTAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAATAAGGGAGAATCAGGTGTTTTCCAAGGCCAGGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACATGTAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGGTTTTTTTGGTTCAATTTTTTACACCCAGCACCCAGTAAGCGAATC] [+] EMBL BM653697 [CCGGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCGAAAAACAAGCGCAACACAACGATCGCGGCAAACTCGTGCGCCAACGAAGAGGAGGCGTCCGCCAACGGTGGACCGATCAAAGCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACACACCGAGGATAGGTGCAGGGTGTGTGTGGATACCGCAGACGACAGCTTAGGCACAAGTGTGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCGACCAGGCGGATCAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAATGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAGATGTAAATTGGTTACAAACGTTTTGGAGGTTCGATTTCAGCGTGCAGCTAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAATAAGGGAGAATCAGGTGTTTTCCAAGGCCAGGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAAACATGTAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGGTTTTTTTGGTTCAATTTTTTACACCCAGCACCCAGTAAGCGAATC] consensusID : consensus_9155#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence [GCAGATCGCCCGAGGNNCNNAGGTGTGCTTTTGTGGGGATAGACCGACAGCGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACNAACCGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGAGAGCGTGCCAAACCAAGGGAGAATCAGTGTTTTCCAAAGCCAGAGGGTAACTTA] [+] EMBL AL696922 [GCAGATCGCCCGAGGNNCNNAGGTGTGCTTTTGTGGGGATAGACCGACAGCGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAACGTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACNAACCGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGGAGGAGCAACCCGCGTGGTGTAGGAGAGCGTGCCAAACCAAGGGAGAATCAGTGTTTTCCAAAGCCAGAGGGTAACTTA] consensusID : consensus_9155#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 86 fasta sequence [TGANCTCAGGGCAGAATCGCCCCGANGTTNGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACAAACGTTTGGAGGTTCG] [+] EMBL AL697189 [TGANCTCAGGGCAGAATCGCCCCGANGTTNGGAATATGCATCGGCAGCATCCAGATGTAAATTGGTTACAAACGTTTGGAGGTTCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TCGTGACGCCCTGCAAGCTGGGCATCCCGAGCTTTGCCAAGTACCTGGCGTCGCATCCGT 60 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GTGATGTGTTCCACCATCTGTTCATTGGCTCGTACGGACTGGTCGTTATATCGTATCTTC 120 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GAGGCGGGTTGGGAGATTGCGTGTTTAGCTTCATGTTCATGATGGAGCTGTCCACACCGT 180 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TCGTGTCATTCCGTAGCATTCTCAGCGTGATGGGATTGAAACAGTCGAAGCTGTACGTCA 240 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TCAATGGGCTGGTGATGCTGGTCACGTTCTTCTGGTGCCGCGTCTTTCTAATGCCGTACG 300 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TGTGCTACTACTACAGTCAGGTAGTGAACAAACCATTCCTAGAGGCTGTGTGGAACTTAC 360 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 CGTGGGGATGTAAGGTGAGCATTTTGGCACTGTTTTTGCCACAGCTCTACTGGTTCCGGT 420 consensus_9155#1 ----------------------------------------CCTCCTACTACCCCTCTCCC 20 consensus_9155#2 -CCGGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACC-GAAAAACAAGCGCAACACAACG 58 consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TAATGGTTCGAGGTGCAATGAAGGTTTTCTTCCCACCCGAAAAACAAGCGCAACACAACG 480 consensus_9155#1 AATCCCTTCGTAAGGAGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGG 80 consensus_9155#2 ATCGCGGCAAACTCGTGCGCCAACGAAGAGGAGGCGTCCGCCAACGGTGGACCGATCAAA 118 consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ATCGCGGCAAACTCGTGCGCCAACGAACAGGAGGCGTCCGCCAACGGTGGACCGATCAAA 540 consensus_9155#1 CGCAAGAGGCGAACTGAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGA 140 consensus_9155#2 GCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTACAC 178 consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GCCTCACAATCCAAAGATAGCGAAATACGATCCTTAATGTAAACTGGAGCAGGGTTGCAC 600 consensus_9155#1 GCAAAAGCTGAACGAGGATGAGTGAAACGATCAAACAGAAAACAGAAAATATTCATATAA 200 consensus_9155#2 ACCGAGGATAGGTGCAGGGTGTGT--GTGGATACCGCAGACGACAGCTTAGGCACAAGTG 236 consensus_9155#3 ---------------------------------------------------------GCA 3 consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ACCGAGGATAGGTGCAGGGTGTGTATGTGGATACCGCAGACGACAGCTTAGGCACAAGTG 660 consensus_9155#1 CTAATCAATGGAGCTTTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCG 260 consensus_9155#2 TGTTTGTGTGCTAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACCG 296 consensus_9155#3 -GATCGCCCGAGGNNCNNAGGTGTGCTTTTGTGGGGATAGACCGACAGC----------- 51 consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TGTTTGTGTG-TAGCGCTTGGTGTGCTTTTGTGGGGATAGACCGACCGACCGACCGACC- 718 consensus_9155#1 AAAAGAAGCGGTAGTAAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACA 320 consensus_9155#2 A----CCAGGCGGATCAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAAC 352 consensus_9155#3 ---------GCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAAC 102 consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 -------AGGCGGATGAGGGCATATATTTTGGGACGGAGGGCATCGACATCTTTAGCAAC 771 consensus_9155#1 CATTTCCATTGAAAGGACGACAGATAAAATAAGGGGGAAATTTAATCAAAATTTAGCTGA 380 consensus_9155#2 GTGTTAATGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAG 412 consensus_9155#3 GTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGC--AGCATCCAG 160 consensus_9155#4 -TGANCTCAGGGCAGAATCGCCCCG---ANGTTNGGAATATGCATCGGC--AGCATCCAG 54 consensus_9155#0 GTGTTAACGGATAAGTGTTATTTTGTGTGTAATTGGAATATGCATCGGCCAGCCATCCAG 831 consensus_9155#1 ATGATGCTAGGACACACACACAGACTG-ACCTGTGGGGTAGTTTTGAGACACACACAGAC 439 ** * * ** ** * * ** * consensus_9155#2 ATGTAAATTGGTTACAAAC-GTTTTGGAGGTTCGATTTCAGCGTGCAGCTAATGGAAGGG 471 consensus_9155#3 ATGTAAATTGGTTACNAACCGTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGG 220 consensus_9155#4 ATGTAAATTGGTTACAAAC--GTTTGGAGGTTCG-------------------------- 86 consensus_9155#0 ATGTAAATTGGTTACAAAC-GTTTTGGAGGTTCGATTTCAGCGTGCAGCGAATGGAAGGG 890 consensus_9155#1 ACACGCATTGGCT-TACACAAGTTCGGACATCTTCACTCA-TAAACATTGGCTGAGTAGG 497 * ***** * ** ** *** * consensus_9155#2 AGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAA--TAAGGGA---GAATCAGGTGTT 526 consensus_9155#3 AGGAGCAACCCGCGTGGTGTAGG-AGAGCGTGCCAAACCAAGGGA---GAATCAG-TGTT 275 consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 AGGAGCAACCCGCGTGGTGTAGGGAGAGCGTGCAAA--CAAGGGA---GAATCAGGTGTT 945 consensus_9155#1 ATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGATTTCGAAAGG 557 consensus_9155#2 TTCCAAGGCCAGGGGATAGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAA 586 consensus_9155#3 TTCCAAAGCCAGAGG---GTAACTTA---------------------------------- 298 consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TTCCAAAGCCAGGGAG-GGTAACTTACACCCACTTCCATCTTGATACAGGCTACAAACAA 1004 consensus_9155#1 AACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGTGAGAGGATAT 617 consensus_9155#2 ACATGTAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCGGTTTTTTTGG 646 consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ACAGATAGAACCGTGTGCTGCTGCTTAGTTTACTAGTCATAGTAGTTGCG-TTTTTTTGG 1063 consensus_9155#1 GACTTTGAAACAATCGCGTGTTTTTTGTAATGTTGCACTTTGTCGAAGCGAAACGGTTTT 677 consensus_9155#2 TTCAATTTTTTACACCCAGCACCCAGTAAGCGAATC------------------------ 682 consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TTCGTTTTTTTACACCCAGCAAGCGAATCAAACCCCACTTCACCCAGTAAACAAATCAAG 1123 consensus_9155#1 TGGCACACCTTTATTCCACACAGGAACGAGCGGC-------------------------- 711 consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TGCAGGGATTGAGATGTATACCTTCCTTAGTTTCTTCCAAAAAAAGGGTTTCTTGCCAGT 1183 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 CGATCCAGCACTGTACCTCCACGAAATGCCCACGATTACCTTAAAGTAATGATAGTATGA 1243 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TAGGTTTTTTGTTGTTGATGTGAAAGCCGCTAAGTTATAGTTACTACAGTTGAGCATGGA 1303 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 AACCAAAACCAAACGTAGGATTAGCCGAAAATCATACCCATCCCACTGACCCACACACAC 1363 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ACACACACACAATCAGGAACATATTAAACCCTTGTTACCACCATCCCCAGTATCCGTTAG 1423 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 AGGGGCATTCCACGGAACGGAAGCACACTGCATTATTACTTATATATATATACAGCGAAC 1483 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 AACGTCTCTTGAACGGCGCGCGCTAGATGATAGACTTTTTTGTGCATTTTTTTCTACAAA 1543 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ACAAACAAACAAAAGCATAGCGACAAAACACCCACACAAACACATATTATAGCGCACAAT 1603 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GTTTTTGGTGCGAATAGTTTACAAACGCGGAAAAATAGGAAAAGCGTACGATATACACAG 1663 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ATTACATATTCTACTCCCGCCTCCTCCTCCTACTACCCCTCTCCCAATCCCTTCGTAAGG 1723 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 AGTGCGTAGTTTTATGTATGGTAGCAGAGTTAGTGAGAAGATTGGCGCAAGAGGCGAACT 1783 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GAGACGGTAGAAGGATTTAGTGAAGGTAGTGCAAAAGGGCATTGAGCAAAAGCTGAACGA 1843 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GGATGAGTGAAACGATCAAACAGAAAACAGAAAATATTCATATAACTAATCAATGGAGCT 1903 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TTCATATTAGTGTGATGTTTACCAATGTTATTTGTACACGGCGCGAAAAGAAGCGGTAGT 1963 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 AAGCGGCAAGGTAGCGGAATAAAGCAGCAACAGAAAACACACACACATTTCCATTGAAAG 2023 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GACGACAGATAAAATAAGGGGGAAATTAAATCAAAATTTAGCTAAATGATGCTAGGACAC 2083 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ACACACAGACACACGCATTGGCTTACACAAGTTCAGAAATCTTCACTCATTAACACATTG 2143 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GCTGAGTAGGATTTAGTAGCGTTTGAGCGTAGGGAGGTGTAGCCGGGAGCAGCATTTCGA 2203 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 TTTCGAAAGGAACGCCGGCGGGGCGGCATTAGTGTTGGCGAACAAGGGGCCGCGCAAGGT 2263 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 GAGAGGATTGACTTTGAAACAATCGTGTGTCTTTGTAATGTTTGCACTTTGTCGAAGCGA 2323 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 AACGGTTTTTGGCACACCTTTATTCCACACAGGAACGAGCGGCAAAGTGGCGAGAAGCGC 2383 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 ------------------------------------------------------------ consensus_9155#3 ------------------------------------------------------------ consensus_9155#4 ------------------------------------------------------------ consensus_9155#0 ACGCCTTGCGCCGCGAATCACGAACGGAAAGGACGGTGTTGGTGTGTTTGTGTATCGATT 2443 consensus_9155#1 ------------------------------------------------------------ consensus_9155#2 --------------- consensus_9155#3 --------------- consensus_9155#4 --------------- consensus_9155#0 TACATAAAATAATAT 2458 consensus_9155#1 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||