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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9171#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1289 fasta sequence
[AATTTACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA-CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCA-CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA-CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG-CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG-GGTTCTAGCGCGAAGCAGA-CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT-GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG-TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAAATAGAATACGTTATAGAGAAATTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTTGACGGTCGGTGCTACCCCACACTCTCGACCGACCCGGTTTACCCCGGGATTCACTGTCTT]
[+] EMBL CNS08JIA [AATTTACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAA CATCTGGCGGCGACCGTGAGCCAACGCGCA GACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGACGCTTTGGCTCGAAGGATCGGTACGAGCGCA ]
[+] EMBL CNS08VVW [ ccACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACGGCGGCACCGGCCG CGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCA CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG GGTTCTAGCGCGAA CAGACCGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGA CT GCGGCTGGCGGTCAC CATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAA CGACCG TCCCGTTCACCGAGCACGTGTTT ]
[+] EMBL CNS08KJK [ TTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCTTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCA CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAA CAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG GG TCTAGCGCGAAG AGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACTGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGA CTGGCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGA ]
[-] EMBL CNS08KJL [ AAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACCACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAG CGGTCTAGCGCGAAGCAGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACTGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAG TGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGGGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAA ]
[-] EMBL CNS08JIB [ GGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTA CCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCTTCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGCGGTT TAGCGCGAAGCAGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAG TGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCGCGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAAATAGAATACGTTATAGA ]
[-] EMBL CNS08VVX [ cATGGGGAAAGCAACCTGAACGACATCATTACCCGCCGTGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCTTCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAG CGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGCGGTT TAGCGCGAAGCAGA CGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAG TGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGCTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGGACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTTATTCCCGTAAAATAGAATACGTTtt ]
[+] EMBL BM614759 [ CCGCGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCT GCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCG TCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGAACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGATCGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAAATAGAATACGTTCTAGAGAAATTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTTGACGGTCGGTGCTACCCCACACTCTCGACCGACCCGGTTTACCCCGGGATTCACTGTCTT]
consensusID : consensus_9171#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1147 fasta sequence
[GGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCT-GGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAACAAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGGGTTCTAGCGCGAA-CAGACGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAG-TGCGGCTGGCGGTCACG-ATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAANGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCNAAGAACC]
[+] EMBL BX620483 [GGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAANGCACAGAANGCGGCGCAAGCATCTGGGCGGCGACCGTGAGCCAACGCG ]
[+] EMBL CNS095FO [ GCCGGGTTTGGCAAGGGGCATTTCATTGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCACCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAA GGCAAGAAATCTCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGC AACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAA CATCT GGCGGCGACCGTGAGCCAACGCGCA CACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAACAAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGGGTTCTAGCGCGAA CAGACGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAG TGCGGCTGGCGGTCACG ATCCGCC ]
[+] EMBL BX627048 [ TGGAAAGTTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCT GGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGG ]
[+] EMBL BX625758 [ GACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGCATCT GGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAAGCGGGCGAAGCAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGCGGTCTAGCGCGAAGCAGACGGCCCACGCCGCACCGGGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCTGCGGCTGGCGGTCACGCATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAANGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCNAAGAACC]
consensusID : consensus_9171#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 598 fasta sequence
[AAGATCGCCCGAGGNTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGGCAAGCATCTGGCGGGACCGTGAG]
[+] EMBL AL931823 [AAGATCGCCCGAGGNTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAGATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGCTCGACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCGCCTCAACGAGCTGCTCGCCATGATGAACACCGAAAGCGAGCTGAAGCTGGTCAAAAAGGTCGATCTTCCCCGTCCGAAGGGCAAGAAATCGCAGGATAAAAAAGCATCCTCCGACAGCGATTCCGATTCCGACGCGGAGGAGGAGCGCCCGAAAGATCTCGCCCAAGCGACGCGCAAAGTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGGCAAGCATCTGGCGGGACCGTGAG]
consensusID : consensus_9171#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 482 fasta sequence
[AATCCCNAGGTATCACATGTTCATATAGCTCGTGCACTTTGTTTAGATTACATAAGTCACAGAGCATCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGTCGACCCGCGGCGACGCGAGTGAAGGCGATGGCAGAAAAAATCGTCCGCGTCTGAACCGCCTCAACGAGCTGTCGCCATGATTGAACACCGAAACGCGATGCTGAACGCTGGTCAAACAAGGTCGATCTTCCCCGTCCGAAGGGCACACGAAATCGCAGGATAAACAAAGCATCCTCCGACAGCGATTCCGATTCCGACCGCGGAGGAGGAGCGCCCGAAAGATCTCCGCCCAAGCGAGCGCAAAGTTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGGTCTCGAAGCTGTCGGTACAGCGGGACCGG]
[+] EMBL AL692939 [AATCCCNAGGTATCACATGTTCATATAGCTCGTGCACTTTGTTTAGATTACATAAGTCACAGAGCATCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTCGAACACTCCCGGCGATGGTAGCGATAAACCAAAACCACCAAAAAAGCCCACAGTCGACCCGCGGCGACGCGAGTGAAGGCGATGGCAGAAAAAATCGTCCGCGTCTGAACCGCCTCAACGAGCTGTCGCCATGATTGAACACCGAAACGCGATGCTGAACGCTGGTCAAACAAGGTCGATCTTCCCCGTCCGAAGGGCACACGAAATCGCAGGATAAACAAAGCATCCTCCGACAGCGATTCCGATTCCGACCGCGGAGGAGGAGCGCCCGAAAGATCTCCGCCCAAGCGAGCGCAAAGTTGGCCACCGCGCTCGGGGGCGACGCGAAGCGCACCGAATCGGAACTGGTCTCGAAGCTGTCGGTACAGCGGGACCGG]
consensusID : consensus_9171#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence
[CCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTACGGTTTATTGATGTTGCTTTATTCACAGTTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTGACGGTCGGTGCTACCCCACACTCTCAACCGACCCGGTTTACCCCGGGATTCACTGTCTTTTTTTCATTTTAACGTACTCTAAAAAAAATATTACCTATTT]
[+] EMBL BM576819 [CCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTACGGTTTATTGATGTTGCTTTATTCACAGTTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTGACGGTCGGTGCTACCCCACACTCTCAACCGACCCGGTTTACCCCGGGATTCACTGTCTTTTTTTCATTTTAACGTACTCTAAAAAAAATATTACCTATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9171#2 ----------------------------------------------------AAGATCGC 8
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 -------------------GGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAG 41
consensus_9171#0 AATTTACGAGTTGTTGTTCGGTTTACAGCCGGGTTTGGCAAGGGGCATTTCATTGGAAAG 60
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 CCGAGGNTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAG 68
consensus_9171#3 ------AATCCCNAGGTATCAC------ATGTTC-ATATAGCTCGTGCAC-TTTGTTTAG 46
consensus_9171#1 TTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAG 101
consensus_9171#0 TTGTAACTTGTAAAGATATCGCTCCACCATGTTCCATATAGCTCGTGCACCTTTGTTTAG 120
consensus_9171#4 ----------------------------------------CCGCGGACGCGTGGGTTTTT 20
* ** * * * ****
consensus_9171#2 ATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 128
consensus_9171#3 ATTACATAAGTCACAGAGCATC-GAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 105
consensus_9171#1 ATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 161
consensus_9171#0 ATTACATAAGTCACAGAGCATCCGAGTGCTGCTGTCCTGCAATAGCTTTTCCTCCGACTC 180
consensus_9171#4 TTTTTTTTTTTTACGGTTTATT--GATGTTGCTTTATTC--ACAG--TTCTATTGAGCGG 74
** * * ** * ** ** **** * * * ** ** * *
consensus_9171#2 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAGCTCG 185
consensus_9171#3 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAG-TCG 161
consensus_9171#1 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAGCTCG 218
consensus_9171#0 GAACACTCCCGGCGATGG-TAGCGATAAACCAAAACCA--CCAAAAAAGCCCACAGCTCG 237
consensus_9171#4 AAGTTGTTTCGGTGATGGATATACATCGTATAAATGCGTGCCGGAAAAGTGGGTTGATTG 134
* * *** ***** ** ** *** * ** ***** * * *
consensus_9171#2 ACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCG 245
consensus_9171#3 ACCCGCGGC-GACGCGAGTGAAGGCGATGGCAG-AAAAAATCGTCCGCG--TCTGAACCG 217
consensus_9171#1 ACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCG 278
consensus_9171#0 ACCCGCGGCCGACGCGAGTGAAGGCGATGGCAGCAAAAAATCGTCCGCCGCTCTGAACCG 297
consensus_9171#4 TTTTGC--TTGACG--------GTCGGTGCTACCCCACACTC-TCAACCGACCCGGTTTA 183
** **** * ** ** * * * ** ** * * *
consensus_9171#2 CCTCAACGAGCTGCTCGCCATGAT-GAACACCGAAA-GCGA-GCTGAA-GCTGGTCAA-A 300
consensus_9171#3 CCTCAACGAGCTG-TCGCCATGATTGAACACCGAAACGCGATGCTGAACGCTGGTCAA-A 275
consensus_9171#1 CCTCAACGAGCTGCTCGCCATGAT-GAACACCGAAA-GCGA-GCTGAA-GCTGGTCAA-A 333
consensus_9171#0 CCTCAACGAGCTGCTCGCCATGAT-GAACACCGAAA-GCGA-GCTGAA-GCTGCTCGGTA 353
consensus_9171#4 CCCCG--GGATTCACTGTCTTTTT--TTCATTTTAACGTAC-TCTAAA-------AAAAA 231
** * * * * * * * ** ** * ** ** *
consensus_9171#2 -AAGGTCGATCTTCCCCG-TCCGAAGGGCA--AGAAATCGCAGGATAAA-AAAGCATCCT 355
consensus_9171#3 CAAGGTCGATCTTCCCCG-TCCGAAGGGCACACGAAATCGCAGGATAAACAAAGCATCCT 334
consensus_9171#1 -AAGGTCGATCTTCCCCG-TCCGAAGGGCA--AGAAATCGCAGGATAAA-AAAGCATCCT 388
consensus_9171#0 CAGCGGCACCGGCCGCCGATGGGGAAAGCAACCTGAACGACATCATTACCGGCATGGTGG 413
consensus_9171#4 TATTACCTATTT------------------------------------------------ 243
* *
consensus_9171#2 CCGACAGCGA--TTCCGATTCCGAC-GCGGAGG---AGGAGCGCCCGAAAGATCTC-GCC 408
consensus_9171#3 CCGACAGCGA--TTCCGATTCCGACCGCGGAGG---AGGAGCGCCCGAAAGATCTCCGCC 389
consensus_9171#1 CCGACAGCGA--TTCCGATTCCGAC-GCGGAGG---AGGAGCGCCCGAAAGATCTC-GCC 441
consensus_9171#0 TGGACAGGAAGGCACAGAAGGCGGC-GCAAGCATCTGGCGGCGACCGTGAGCCAAC-GCG 471
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 CAAGCGACGCGCAAAGT-GGCCACCGCGCTCGGG--GGCGACGCGAAGCGCACCGAATCG 465
consensus_9171#3 CAAGCGA-GCGCAAAGTTGGCCACCGCGCTCGGG--GGCGACGCGAAGCGCACCGAATCG 446
consensus_9171#1 CAAGCGACGCGCAAAGT-GGCCACCGCGCTCGGG--GGCGACGCGAAGCGCACCGAATCG 498
consensus_9171#0 CACACGCTG-GTGAAGAAATCGATCGACTCCAAGCGGGCGAACAAAGGCGCACGGAAGAG 530
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 GAA----CTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAA 521
consensus_9171#3 GAA----CTGGTCTCGAAGCTG-TCGGTACAGCGGGACCGG------------------- 482
consensus_9171#1 GAA----CTGCTCTCGAAGCTGCTCGGTACAGCGGCACCGGCCGCCGATGGGGAAAGCAA 554
consensus_9171#0 GGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGGCTCGAAGGATCGGTACGAGCGCAAGGGT 590
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 CCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGG-GCAAGC 580
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 CCTGAACGACATCATTACCGGCATGGTGGTGGACAGGAAGGCACAGAAGGCGGCGCAAGC 614
consensus_9171#0 TCTAGCGCGAAGCA--GACGGC-CCACGCCGCACCGGGCGGTCCGGGCAGTGT-GAAGCT 646
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ATCTGGCGG-GACCGTGAG----------------------------------------- 598
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 ATCTGGCGGCGACCGTGAGCCAACGCGCAGCACGCTGGTGAAGAAATCGATCGACTCCAA 674
consensus_9171#0 GTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAGGCCGCGCTGAAGGAAAGCCCCGA 706
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 GCGGGCGAACAAAAGGCGCACGGAAGAGGGGGTTGCTGGTGGTGAGCAGGAGCGCTTTGG 734
consensus_9171#0 CAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAGCTGCGGCTGGCGGTCACGCATCC 766
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 CTCGAAGGATCGGTACGAGCGCAAGGGTTCTAGCGCGAACAGACGGCCCACGCCGCACCG 794
consensus_9171#0 GCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGAGCAGGGCAAGCTGTGGAAGTT 826
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 GGCGGTCCGGGCAGTGTGAAGCTGTTCGGCGAGGAACCGTTGGGCATTTTTACCGACCAG 854
consensus_9171#0 CCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGACCGTCCCGTTCACCGAGCACGT 886
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 GCCGCGCTGAAGGAAAGCCCCGACAAGCTGCGCACCTGGCAGCGGCTGAACGAGCGCGAG 914
consensus_9171#0 GTTTCTCGAGGAGCAGCTGGAAGGGTGGTGCCCGCGCAAGGGCCCGGTCCGCCACTTTAT 946
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 TGCGGCTGGCGGTCACGATCCGCCCGCAAACTACTTCCAGAAGATGGCCCTCTGGACGGA 974
consensus_9171#0 GGAGCTGGTGTGCGTGGGGCTGTCGAAGAACCACTACATTACGGCGCAGGAAAAGCGCGA 1006
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 GCAGGGCAAGCTGTGGAAGTTCCCGATCGACAACGAGCAGGGACGGGAGGCGGAAGCGAC 1034
consensus_9171#0 ACACATCGAGTGGTTCCGGGACTATTTCGAGCAGAAGAAGGAACTGCTGCAGGACCTGAT 1066
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 CGTCCCGTTCACCGAGCACGTGTTTCTCGAGGAGCAGCTGGAANGGTGGTGCCCGCGCAA 1094
consensus_9171#0 CGTGGCGGAAGCGGCCAGCAAGGCGAAGGAGGTTGAGAAATAATCATTAATTCCCGTAAA 1126
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 GGGCCCGGTCCGCCACTTTATGGAGCTGGTGTGCGTGGGGCTGTCNAAGAACC------- 1147
consensus_9171#0 ATAGAATACGTTATAGAGAAATTCTATTGAGCGGAAGTTGTTTCGGTGATGGATATACAT 1186
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 ------------------------------------------------------------
consensus_9171#3 ------------------------------------------------------------
consensus_9171#1 ------------------------------------------------------------
consensus_9171#0 CGTATAAATGCGTGCCGGAAAAGTGGGTTGATTGTTTTGCTTTGACGGTCGGTGCTACCC 1246
consensus_9171#4 ------------------------------------------------------------
consensus_9171#2 -------------------------------------------
consensus_9171#3 -------------------------------------------
consensus_9171#1 -------------------------------------------
consensus_9171#0 CACACTCTCGACCGACCCGGTTTACCCCGGGATTCACTGTCTT 1289
consensus_9171#4 -------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||