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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9181#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1133 fasta sequence
[TTTAAAATGCTTTTTGTTTTATTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGCTGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATATATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGT-ATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC-TTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGC-TTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTTTGCTTCCTTGC]
[+] EMBL CNS08ZPR [TTTAAAATGCTTTTTGTTTTATTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGCTGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATATATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGT ATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTATGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTAATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC TTTTTTTGTTACACC ]
[+] EMBL CNS08EB9 [ TTTTATTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGCTGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATATATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGT ATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTTATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTCTTTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGC TTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTT ]
[-] EMBL CNS08EB8 [ TCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGTGATCGTAGTGG TTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC TTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTTTGCTTC ]
[-] EMBL CNS08ZPQ [ GATGTATGGTGAGCTTCATTAGTAAATAGAGGTTTGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAAAACTCACAAGCACGCAGTGATCGTAGTGG TTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAATTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGTTTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACACACGTCGCTCTTTGTCGCGTTTTTCCTC TTTTTTTGTTACACCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGC TTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCC TTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTCTTCACACTTGC]
consensusID : consensus_9181#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 886 fasta sequence
[GAATCCCCCGAGGTTATTTTTTTGTATGCTTTTGTTTTATTACACATTTGCAACGCTACCTCATTAGGACTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG-AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGCGG]
[+] EMBL AL697392 [GAATCCCCCGAGGTTATTTTTTTGTATGCTTTTGTTTTATTACACATTTGCAACGCTACCTCATTAGGACTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATG TTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGT ]
[-] EMBL BX621788 [ CCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTG ]
[-] EMBL BX621444 [ TCCATTTCCATTGTGCCTGTGCCNGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCT ]
[-] EMBL BM584991 [ AAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGGGGGGGGGGAGGGAATAATAAAACCAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGCGG]
[-] EMBL BX612881 [ GGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAGAACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGATCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTGGGGCGGAGTAAGTTTGGTGGGGGTGGGGGGGGAGGGAATAATAAAACAAACGTTTAAACAATGGG AAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATAAATGCTTTGCACACGACGCACACA ]
[-] EMBL BX625936 [ AATGGGAAAAATAAAATAGTCATACGGCCGTCNTACTGGCGTCATACCACTAACACATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCT ]
consensusID : consensus_9181#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 606 fasta sequence
[CACCATTTTCACCACTAGTGCGCACATTCACCTTCGATTTGTAAGTCTCCTGTTATTGATTCCTAGAGTACACAGTGTGTATGTATAGTTTGTTTGCTCTTTTTGTTTCTTCCTCTACTTCTTTCGTCTAATATATGCTAGCGTGCTAGCGTTCTTCCCCCTTTTCCCTTCTCCCTGCAGCCTTGTGTAAGCTAATATGGCCATCGTATCGTATGCAACAACAGGCAGGACTCATCATTGCGCCCTGTTACGACTAGACTTAAACATAAAACACCCGGGCGGCACACCACCACTGAGCGCGCGAGATGCTACGATTCTTTCCACCATTTCCGTGTTCATCCCTATGTATGTACAACTCATAAGAAGCTAATACTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTGCATGCTTTTAGTTTTATTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCTGGAGTTTCCATTTTACTTGCATTTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCCTTTCCATTGTGCCTGTGCCCACACTCCTCTGACAACATATATCTCTCTCTC]
[-] EMBL BX622168 [CACCATTTTCACCACTAGTGCGCACATTCACCTTCGATTTGTAAGTCTCCTGTTATTGATTCCTAGAGTACACAGTGTGTATGTATAGTTTGTTTGCTCTTTTTGTTTCTTCCTCTACTTCTTTCGTCTAATATATGCTAGCGTGCTAGCGTTCTTCCCCCTTTTCCCTTCTCCCTGCAGCCTTGTGTAAGCTAATATGGCCATCGTATCGTATGCAACAACAGGCAGGACTCATCATTGCGCCCTGTTACGACTAGACTTAAACATAAAACACCCGGGCGGCACACCACCACTGAGCGCGCGAGATGCTACGATTCTTTCCACCATTTCCGTGTTCATCCCTATGTATGTACAACTCATAAGAAGCTAATACTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTGCATGCTTTTAGTTTTATTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCTGGAGTTTCCATTTTACTTGCATTTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCCTTTCCATTGTGCCTGTGCCCACACTCCTCTGACAACATATATCTCTCTCTC]
consensusID : consensus_9181#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[AAGCTAATANNTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTTTGTATGCTTTTTGTTTTAGTTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTGTCCANCGTGCCGAATTCTGGC]
[-] EMBL BX468528 [AAGCTAATANNTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTTTGTATGCTTTTTGTTTTAGTTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGCTGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACTTTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATATATCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGTGAGCTTCATTAGTAAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTACACTACCTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCACTAACTGGGAAAAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGTGTGTGTGTATATATGAGCTATTATCATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACCGGATGGTTGTCCANCGTGCCGAATTCTGGC]
consensusID : consensus_9181#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence
[GTTTTTTCTTCTTNTTNTTGCTTCTCGTCTCTTCTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCTTGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTGCTTCACACTTCCTCGTTGCAATAAAAACTCGTTTTGTTTCAATTAAAAATAACATAATCAAAACAAATCTTTCCACGATACGATATAACTAGATAAGCCTAACATTGGAGCATGAAACATTGGAGCTGATAACGGTTACACACTTCGCCTAAAACACTCGTCCATCGTGCCGATTCTTGCCT]
[-] EMBL BX468436 [GTTTTTTCTTCTTNTTNTTGCTTCTCGTCTCTTCTTGTTACATCTATATATGCTTTGCACACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCATCTTTGTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGTTCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTCTCTTGTCGTGTTTTTACACCTTGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTCTAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTGCTTCACACTTCCTCGTTGCAATAAAAACTCGTTTTGTTTCAATTAAAAATAACATAATCAAAACAAATCTTTCCACGATACGATATAACTAGATAAGCCTAACATTGGAGCATGAAACATTGGAGCTGATAACGGTTACACACTTCGCCTAAAACACTCGTCCATCGTGCCGATTCTTGCCT]
consensusID : consensus_9181#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 193 fasta sequence
[CCGGTTATCAGCTCCAATGTTTCAACTAGCTAGTGTGTTAGGCTTATCTAGTTATATCGTATCGTGAAAAGATTTGTTTTGATTATGTTATTTTTAATTGAAACAAAACGAGTTTTTATCGCAACGCGGAAGTGTGAAGCAAAAAAAAACAAAAAAAAGAAAGAAGCAGAGTTAGGATGCAACGGAACGGAAT]
[+] EMBL BM618869 [CCGGTTATCAGCTCCAATGTTTCAACTAGCTAGTGTGTTAGGCTTATCTAGTTATATCGTATCGTGAAAAGATTTGTTTTGATTATGTTATTTTTAATTGAAACAAAACGAGTTTTTATCGCAACGCGGAAGTGTGAAGCAAAAAAAAACAAAAAAAAGAAAGAAGCAGAGTTAGGATGCAACGGAACGGAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9181#1 -------------------GAATCCCCCGAGGTTATTTTTTT--GTATGC---TTTT-GT 35
consensus_9181#3 AAGCTAATANNTCTTTCGTATGTGTGTGAGTGTTGTTTTTTTTTGTATGC---TTTTTGT 57
consensus_9181#0 ----------------------------------------TTTAAAATGC---TTTTTGT 17
consensus_9181#2 ---------------------------CACCATTTTCACCACTAGTGCGCACATTCACCT 33
consensus_9181#4 ------------------------------------------------GTTTTTTCTTCT 12
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 TTTA-TTACACATTT-GCAACGCTACCTCATTAGGACTT-GTTTAGGAGTTGTGGCTGGC 92
consensus_9181#3 TTTAGTTACACATTTTGCAACGCTACCTCATTAGGACTTTGTTTAGGAGTTGTGGCTGGC 117
consensus_9181#0 TTTA-TTACACGTTTTGCAACGCTACCTCATTAGGACTTTGTTTAGAAGTTGTGGCTGGC 76
consensus_9181#2 TCGATTTGTAAGTCTCCTGTTATTGATTCCTAGAGTACACAGTGTGTATGTATAGTTTGT 93
consensus_9181#4 TNTTNTTGCTTCTCGTCTCTTCTTGTTACATCTA-TATATGCTTTGCACACGACGCACAC 71
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 TGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACT 152
consensus_9181#3 TGGCTGGCGTTTCCATTTTACTTGCATCTTCCTCATCGTAGTACAATCTCTTAGTTTACT 177
consensus_9181#0 TGGCTGGCGTTTACATTTTACTTGCGTCTTCCTCATCGTAGTACAATCTCTTAGTTTACT 136
consensus_9181#2 TTGCT--CTTTTTGTTTCTTCCTCTACTTCTTTCGTC-TAATATA---TGCTAGCGTGCT 147
consensus_9181#4 ATTCTAACACATTCATTC-GCTTCTTTCGTTCTCTTCTTACTATGACACTAAAGGTTTCA 130
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 TTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATA 212
consensus_9181#3 TTCCATCTTTTTCCATTTCCATTGTGCCTGTGCCCGTACTCCTGTCATCTACAACATATA 237
consensus_9181#0 TTCTATCTTTTTCCCCTTCCATTGTGCCTGTGCCCGCACTCCTGTCATCTACAACATATA 196
consensus_9181#2 AGCGTTCTTCCCCCTTTTCCCTTCTCCCTGCAGC----CTTGTGTAAGCTA------ATA 197
consensus_9181#4 TCTTTGTTTTTGTATGTTTTCTTTTTCTTGCTTT-GTTCTCGATTATGTTCCTAT---CA 186
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 TATCTCTCTCTCT------------GCATGTTTGTATGGTGTATGATGTATGGT-GAGCT 259
consensus_9181#3 TATCTCTCTCTCT------------GCATGTTTGTATGGTGTATGATGTATGGT-GAGCT 284
consensus_9181#0 TATCTCTCTCTCTCTCTCTCTCTCTGCATGTTTGTATGGTGTATGATGTATGGT-GAGCT 255
consensus_9181#2 TGGCCATCGTATC------------GTATGCAACAACAG-GCAGGACTCATCATTGCGCC 244
consensus_9181#4 TACCTAGTATTTCAC----------GTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTT 236
consensus_9181#5 -----------------------------------------------------CCGGTTA 7
consensus_9181#1 TCATTAGTAAA-TAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTAC 318
consensus_9181#3 TCATTAGTAAAATAGAGGTTGGCTGGCGTTCGTCTTCCTTAAACTTCCCCCTAAGCGTAC 344
consensus_9181#0 TCATTAGTAAA-TAGAGGTTGGCTGGCGTTCGTCTTCCTCAAACTTCCCCCTAAGCGTAC 314
consensus_9181#2 CTGTTAC--GACTAGACTTAAACATAAAACACCCGGGCGGCACACCACCACTGAGCGCGC 302
consensus_9181#4 TCTCTTGTCGTGTTTTTACACCTTGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGT 296
consensus_9181#5 TCAGCTCCAATGTTTCAACTAGCTAGTGTGTTAGGCTTATCTAGTTATATCGTATCGTGA 67
* *
consensus_9181#1 ACTAC-CTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCAC-TAACTGGGAA 376
consensus_9181#3 ACTAC-CTACCGGCGTACCTGCTGCTAGCGGTTTTAGCGGGCTTTCCAC-TAACTGGGAA 402
consensus_9181#0 ACTAC-CTACCGGCGTACCTGTTGCTAACGGTTTTAGCGGGCTTTCCAC-TAACTGGGAA 372
consensus_9181#2 GAGATGCTACGATTCTTTCCACCATTTCCGTGTTCATCCCTATGTATGTACAACTCATAA 362
consensus_9181#4 TCTA----ACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTGCTTCACAC-TTCCTCGTTG 351
consensus_9181#5 A-------AAGATTTGTTTTGATTATGTTATTTTTAATTGAAACAAAAC--GAGTTTTTA 118
* * ** *
consensus_9181#1 AAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGT--GTGTGTGTATATATGAGC 434
consensus_9181#3 AAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGT--GTGTGTGTATATATGAGC 460
consensus_9181#0 AAGCAAAGTGTGGTAGTGGATTTGTTCAACATCGGCTTGT--GTGTGTGTATATATGAGC 430
consensus_9181#2 GAAGCTAATACTCTTTCGTATGTGTGTGAGTGTTGTTTTT--TTGCATGCTTTTA-GTTT 419
consensus_9181#4 CAATAAAAACTCGTTTTGTTTCAATTAAAAATAACATAATCAAAACAAATCTTTCCACGA 411
consensus_9181#5 TCGCAACGCGGAAGTGTGAAGCAAAAAAAAACAAAAAAAA-GAAAGAAGCAGAGTTAGGA 177
* *
consensus_9181#1 TATTAT-CATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACC 493
consensus_9181#3 TATTAT-CATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACC 519
consensus_9181#0 TATTAT-CATTTATTTACGCTTCTTCAAGCGTACGTACAAACGCCTAAGTACTGAGTACC 489
consensus_9181#2 TATTACACATTTTGCAACGCTACCTCATTAGGACTT-----TGTTTAGGAGTTGTG-GCT 473
consensus_9181#4 TACGATATAACTAGATAAGCCTAA-CATTGGAGCATGAAACATTGGAGCTGATAACGGTT 470
consensus_9181#5 TGCAACGGAACGGAAT-------------------------------------------- 193
* * *
consensus_9181#1 GGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAG 553
consensus_9181#3 GGATGGTT-GTCCANCGTGCCGAATTC--TGGC--------------------------- 549
consensus_9181#0 GGATGGTTTGTTTACAGCATTAAGCAAAATGGCTTGGATATGACTTTGAAACCTTAAAAG 549
consensus_9181#2 GGCTGGCT-GGCTGGAGTTTCCATTTTACTTGCATTTTCCTCATCGTAGTAC---AATCT 529
consensus_9181#4 ACACACTTCGCCTAAAACACTCGTCCATCGTGCCGATTCTTGCCT--------------- 515
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 AACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACATGCACTGA--- 610
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 AACAGATCCTAACTGAGAACTAAGTACGACGATCGCGCAAACACTCACAAGCACGCAGTA 609
consensus_9181#2 CTTAGTTTACTTTCCATCTTTTTCCCTTTCCATTGTGCCTGTGCCCACACTCCTCTGACA 589
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 TCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTG 670
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 TCGTAGTGGCTTGCGCGCGTAATAAAAGTAACAAAAGTTCAACTAATAAAGTGAAGAGTG 669
consensus_9181#2 ACATA-TATCTCTCTCTC------------------------------------------ 606
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 GGGCGGAGTAAGTTTGGTGGGGGTGGGG-------GGGGAGGGAATAATAAAACAAACGT 723
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 GGGCGGAGTAAGTTTGGCGGGGGGGGGGTGGTGTGGGGGAGGGAATAATAAAACAAACGT 729
consensus_9181#2 ------------------------------------------------------------
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 TTAAACAATGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATACCACTAACA 783
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 TTAAACAACGGGAAAATAAAATAGTCATACGGCCGTCCTACTGGCGTCATGCCACTAACA 789
consensus_9181#2 ------------------------------------------------------------
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 CATGTGGCTCTTTGTCGCGTTTTTTTCCTCTTTTTTTGTTACATCTATATATGCTTTGCA 843
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 CACGTCGCTCTTTGTCGCGTTTTT--CCTCTTTTTTTGTTACACCTATATATGCTTTGCA 847
consensus_9181#2 ------------------------------------------------------------
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 CACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGCGG----------------- 886
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 CACGACGCACACATTCTAACACATTCATTCGCTTCTTTCGTTCTCTTCTTACTATGACAC 907
consensus_9181#2 ------------------------------------------------------------
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 ------------------------------------------------------------
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 TAAAGGTTTCATCTTTGTTTTTTGTATGTTTTCTTTTTCTTGCTTTGTTCTCGATTATGT 967
consensus_9181#2 ------------------------------------------------------------
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 ------------------------------------------------------------
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 TCCTATCATACCTAGTATTTCACGTTTCTCTCTTTGTTTCTCTTTCTCTCTCTCGCTTTC 1027
consensus_9181#2 ------------------------------------------------------------
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 ------------------------------------------------------------
consensus_9181#3 ------------------------------------------------------------
consensus_9181#0 TCTTGTCGTGTTTTTACACCATGTTTTTCTTTGCACTGCAAATTCCGTTCCGTTGCGTTC 1087
consensus_9181#2 ------------------------------------------------------------
consensus_9181#4 ------------------------------------------------------------
consensus_9181#5 ------------------------------------------------------------
consensus_9181#1 ----------------------------------------------
consensus_9181#3 ----------------------------------------------
consensus_9181#0 TAACTCTGCTTCTTTCTTTTTTTGTTTTTTTTTTTTGCTTCCTTGC 1133
consensus_9181#2 ----------------------------------------------
consensus_9181#4 ----------------------------------------------
consensus_9181#5 ----------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||