These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9182#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1150 fasta sequence [TTGAACGCATATGGCGCATCGGACGTTTAATCCCGACCGATGCACACATTCTTGAGTGCCTACTAATTACCAAAGTCTCATTTAGTTAACTACAGTGGCCGTCCGCGAAGGTGCCCGGGTCATCCGACGCACTGGGCGGTCGCTGTGCATAATGACGTGCTTGGTCCCCGTCTGCGGGTCCTCGGGCGTTGAAAGTGGACACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTGTTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCGTTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTATCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCGAATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGTCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCGCACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAACGTAATAAACATCTGATGAAAACATCTAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCGGGGG] [+] EMBL CNS09CHT [TTGAACGCATATGGCGCATCGGACGTTTAATCCCGACCGATGCACACATTCTTGAGTGCCTACTAATTACCAAAGTCTCATTTAGTTAACTACAGTGGCCGTCCGCGAAGGTGCCCGGGTCATCCGACGCACTGGGCGGTCGCTGTGCATAATGACGTGCTTGGTCCCCGTCTGCGGGTCCTCGGGCGTTGAAAGTGGACACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTGTTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCGTTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTATCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCGAATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGTCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAA CAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCA ] [-] EMBL CNS09CHU [ GTCTGCGGGTCCTCGGGCGTTGAAAGTGAAAACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTGTTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCGTTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTATCTTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCG ATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGTCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCGCACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAACGTAATAAACATCTGATGAAA ] [+] EMBL CNS08RWQ [ AGCAAATTGTCCACGAGGGTCTATCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCGATTGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGCCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCGCACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAACGTAATAAACATCTGATGAAAACATCTAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCGGGGG] [-] EMBL CNS08M8T [ CGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTCCCTGCAGTCCGTCGCTGAGGAACTTTTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGAACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTTACTGGTTCTGTAACGCCGTGAACAAGCATCGTGAACTTCGTGTTCTAACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCACTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGT ] consensusID : consensus_9182#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 736 fasta sequence [CCGCCCACGCGTCCG-ACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGACCGCCCACGCGTCCG-------CCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG-CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCC] [+] EMBL BM592026 [CCGCCCACGCGTCCG ACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCAAGACC CCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAA ] [+] EMBL BM597632 [CCGCCCACGCGTCCGTACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCGAGACC CCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGTCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAAAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACGCCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCGAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGC ] [+] EMBL BM603179 [ CCGCCCACGCGTCCG CCCAC GCGTCCGCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGATCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCC] [+] EMBL BM576196 [ CCGCCCACGCGTCCGCGAGACCCCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCACCGGTTACCAGAAAAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACGCCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCGAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGATCGCCTCGGAGACCTACCACT ] [+] EMBL BM610448 [ CCGCCCACGCGTCCGGACC CCCACTGGATACCCCGAGAACGATAACGACGACTTTATCCATATGCCCCGATGGTTCAACGGATCCGTTGATGAGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAAAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAG ] consensusID : consensus_9182#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence [GGTTAGTGGATTGCGTACACGGCAAAACCGACTACAGCCCCGCACGCCCGGCTGCGCCCCGTCCGTGCTGATTATGTTCATCAATATGATGCTGTTTAAAAACTCCGAACCCTTCCACGGCTGCGACGAGTTCATGTTCGAGGGCCAGAACGAGCTGCAGCGCACGTTCGTGTTCATTGCGCTGNTCTGCATTCCCTGGATTGCTGCTCGGCAAGCCGTTCTATTTGATGTTCAAGCGCAAGAACGNGTTCGCGAACCAATCCCGAACAATGGCGACGTACACCAGTGCGGTGACGCTGAACCAATTCCTACCAGCCGAAACACACGATTCGCACGACGATGAGCCGATTGGCGGNAATCTTCATCCATCAGGCATTCACACGATCGAGTACGTGCTCAGTACCGTGTCAGCACACTGGNGTCTAACTGCGGTACTGTGGGGCTCTGTCCCTTGCCATGNCCCAACTGTCCGAAGGTGCTGTGGAACATGGTGCTAGTCGATGGGGCTTGAAGCAAAACCTCCTTACAAAGGGTTGCCATCATTGCCTGTACTTATGTCTNTNTGGCGCCTGGTACCCTGTNTACGCTCGCCATTACTCGTCNCATG] [+] EMBL AL696106 [GGTTAGTGGATTGCGTACACGGCAAAACCGACTACAGCCCCGCACGCCCGGCTGCGCCCCGTCCGTGCTGATTATGTTCATCAATATGATGCTGTTTAAAAACTCCGAACCCTTCCACGGCTGCGACGAGTTCATGTTCGAGGGCCAGAACGAGCTGCAGCGCACGTTCGTGTTCATTGCGCTGNTCTGCATTCCCTGGATTGCTGCTCGGCAAGCCGTTCTATTTGATGTTCAAGCGCAAGAACGNGTTCGCGAACCAATCCCGAACAATGGCGACGTACACCAGTGCGGTGACGCTGAACCAATTCCTACCAGCCGAAACACACGATTCGCACGACGATGAGCCGATTGGCGGNAATCTTCATCCATCAGGCATTCACACGATCGAGTACGTGCTCAGTACCGTGTCAGCACACTGGNGTCTAACTGCGGTACTGTGGGGCTCTGTCCCTTGCCATGNCCCAACTGTCCGAAGGTGCTGTGGAACATGGTGCTAGTCGATGGGGCTTGAAGCAAAACCTCCTTACAAAGGGTTGCCATCATTGCCTGTACTTATGTCTNTNTGGCGCCTGGTACCCTGTNTACGCTCGCCATTACTCGTCNCATG] consensusID : consensus_9182#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 580 fasta sequence [CGAGTAGAGTCGTTCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCAAAGAAGGCCCCATCCTCGGTCTTCGTTCTCTTCTCCCAGAAGCAGATCGCCGAATTCAAAGAGGCTTTCGCGCTAATCGACACCAACGGCAAGATCGATGGCGAGAAGTTCCGCTTCGCCCTGACCCACTGGGGCCAGGACAAGTTCACCGAGGACGAGGTTGACGATGCATTCGATCAGATGGTCATTGACGATAAGGGCTACATCGACACTGCTGCTCTGATCGGCATGCTCACCGGATCCGAGGAGGGAGAGGAAGAATAAATTTTATAATTAAAAGCCAAAAACAAAACCAAAAAACTAACCTAAAAAAAATCTAAACAATGAATTCTGTTTATTTTGTATAACTAAAAAAAAAAAAAGGCCACATGTGCCCGAGCGG] [+] EMBL CNS08G00 [CGAGTAGAGTCGTTCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCAAAGAAGGCCCCATCCTCGGTCTTCGTTCTCTTCTCCCAGAAGCAGATCGCCGAATTCAAAGAGGCTTTCGCGCTAATCGACACCAACGGCAAGATCGATGGCGAGAAGTTCCGCTTCGCCCTGACCCACTGGGGCCAGGACAAGTTCACCGAGGACGAGGTTGACGATGCATTCGATCAGATGGTCATTGACGATAAGGGCTACATCGACACTGCTGCTCTGATCGGCATGCTCACCGGATCCGAGGAGGGAGAGGAAGAATAAATTTTATAATTAAAAGCCAAAAACAAAACCAAAAAACTAACCTAAAAAAAATCTAAACAATGAATTCTGTTTATTTTGTATAACTAAAAAAAAAAAAAGGCCACATGTGCCCGAGCGG] consensusID : consensus_9182#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGTTTGCAACTATTACTGCGCGACACACAGCAAGAGCCTGTGTAAAGAGGCGACTTTTAATTTAGAAGAAAAAAAAAACGCACAAACTTACACACTTAACCGCTCGCTCTCACCAATCCACCAAAACGGATCCGGTGCCGGTCACAGTGTGGCTGGCTGGCCGTGTGCTAAGCCGTACTTTCGCGTCATCGCGTCTAAACGCTCTTCACAGGCCAAGACGACGCGCGCAGCAAACAACGACAAACCCGGCGACAGCGGTGCTGTACTCTCTGCTGACAGTGGTTTACATCATAGTAGGTACTGCATCCTGCGGGACTGATTTTCGGCATGCATTAGTTCATCTAAAAGGCAAACAATTTGAAAAGAAAACAACAATAAGTTTAAACCCTTTCTGTGTGAACTTTGGAAATACGCACGGGGCTACGGAAAGCATGTGAAAGTGTGTTTTTGGAAGTGCTAAAGTTGTGTTGAAACCGAAATCTTTC] [+] EMBL BM596879 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGTTTGCAACTATTACTGCGCGACACACAGCAAGAGCCTGTGTAAAGAGGCGACTTTTAATTTAGAAGAAAAAAAAAACGCACAAACTTACACACTTAACCGCTCGCTCTCACCAATCCACCAAAACGGATCCGGTGCCGGTCACAGTGTGGCTGGCTGGCCGTGTGCTAAGCCGTACTTTCGCGTCATCGCGTCTAAACGCTCTTCACAGGCCAAGACGACGCGCGCAGCAAACAACGACAAACCCGGCGACAGCGGTGCTGTACTCTCTGCTGACAGTGGTTTACATCATAGTAGGTACTGCATCCTGCGGGACTGATTTTCGGCATGCATTAGTTCATCTAAAAGGCAAACAATTTGAAAAGAAAACAACAATAAGTTTAAACCCTTTCTGTGTGAACTTTGGAAATACGCACGGGGCTACGGAAAGCATGTGAAAGTGTGTTTTTGGAAGTGCTAAAGTTGTGTTGAAACCGAAATCTTTC] consensusID : consensus_9182#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 478 fasta sequence [CGACCCACGCGTCCGGATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGGGGCCGGACAAGGCACGCCGTCTCGGATACAAGGCCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGCGGCCGTAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGTCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCATAACGCTATCCGTCGTGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTT] [+] EMBL BM654761 [CGACCCACGCGTCCGGATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGGGGCCGGACAAGGCACGCCGTCTCGGATACAAGGCCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGCGGCCGTAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGTCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCATAACGCTATCCGTCGTGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTT] consensusID : consensus_9182#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence [ATCGGCACGAGGTNNTGATGGACACATTTCGTGAGGAATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGGCAGTGCAAGAAGGAGCTGAACGGGATNNAAGCCCTCCCGGGCGTGCGAGCGCCCGCGTATGAGGCCGGCGGCTGAAGANCGNTCAACCGTAACGGTTCNGTGGTGTCCTTGTGCCACCACTGTTCTNGCGTTAGCGCATTATCCGGGGCATTTCTGGATTCGAACGAAGGCAGAAAGGNCGTTGAAAGTGCTGGCGCTCAGN] [+] EMBL BX469659 [ATCGGCACGAGGTNNTGATGGACACATTTCGTGAGGAATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGGCAGTGCAAGAAGGAGCTGAACGGGATNNAAGCCCTCCCGGGCGTGCGAGCGCCCGCGTATGAGGCCGGCGGCTGAAGANCGNTCAACCGTAACGGTTCNGTGGTGTCCTTGTGCCACCACTGTTCTNGCGTTAGCGCATTATCCGGGGCATTTCTGGATTCGAACGAAGGCAGAAAGGNCGTTGAAAGTGCTGGCGCTCAGN] consensusID : consensus_9182#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence [CCGCCCACGCGTCCGCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCA] [+] EMBL BM624584 [CCGCCCACGCGTCCGCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9182#3 ------------------------------------------------------------ consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 TTGAACGCATATGGCGCATCGGACGTTTAATCCCGACCGATGCACACATTCTTGAGTGCC 60 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ------------------------------------------------------------ consensus_9182#2 ------------------------------------------------------------ consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 ------------------------------------------------------------ consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 TACTAATTACCAAAGTCTCATTTAGTTAACTACAGTGGCCGTCCGCGAAGGTGCCCGGGT 120 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ------------------------------------------------------------ consensus_9182#2 ------------------------------------------------------------ consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 ------------------------------------------------------------ consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 CATCCGACGCACTGGGCGGTCGCTGTGCATAATGACGTGCTTGGTCCCCGTCTGCGGGTC 180 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ------------------------------------------------------------ consensus_9182#2 ------------------------------------------------------------ consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 ------------------------------------------------------------ consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 CTCGGGCGTTGAAAGTGGACACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTG 240 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ------------------------------------------------------------ consensus_9182#2 ------------------------------------------------------------ consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 ------------------------------------------------------------ consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 TTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCG 300 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ----------------------------------CCGCCCACGCGTCCGACAGCCTGAAG 26 consensus_9182#2 ------------------------------------------------------------ consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 ------------------------------------------------------------ consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 TTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTA 360 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGACCGCCCAC 86 consensus_9182#2 ------------------------------------------------------------ consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 ----------------------------------------------------CGAGTAGA 8 consensus_9182#7 ---------------------------------------------------CCGCCCACG 9 consensus_9182#0 TCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAA 420 consensus_9182#5 ----------------------------------------------------CGACCCAC 8 consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 GCGTCCGCCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTG 146 consensus_9182#2 -------------------------------------------------GGTTAGTGGAT 11 consensus_9182#4 ---------------------------------------------------CCGCGGACG 9 consensus_9182#3 GTCGTTCTAATCTAACCAGCTAAGCAC---CATGTCTGAGAAGGAGAAG----AAGGTCA 61 consensus_9182#7 CGTCCGCTAATCTAACCAGCTAAGCAC---CATGTCTGAGAAGGAGAAG----AAGGTCA 62 consensus_9182#0 GCAGAGCGAATGTGATGCGCTACCTGCTG-CGTATCCGCGTTTGGCAGT----ACCGCCA 475 consensus_9182#5 GC-GTCCGGATGTGATGCGCTACCTGCTG-CGTATCCGCGTTTGGCAGT----ACCGCCA 62 consensus_9182#6 -----ATCGGCACGAGGTNNTGATGGA---CACATTTCGTGAGGAATAA----TTCGCCA 48 consensus_9182#1 GTTCAACGGATCCGCTGATGTGAACATGG-CCTACTCTCGCCTGGTTGATGCCAAGGTTG 205 consensus_9182#2 TGCGTACACGGCAAAACCGACTACAGCCC-CGCACGCCCGGCTGCGCCCCGTCCGTGCTG 70 consensus_9182#4 CGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGTTTGCAACTATTACTGCGCGACACAC 69 consensus_9182#3 AG-AAGAAGAAGGCGTCGTCCAAGG-----ATGACACC--CCAGCAGAT--ACCCCTGGA 111 consensus_9182#7 AG-AAGAAGAAGGCGTCGTCCAAGG-----ATGACACC--CCAGCAGAT--ACCCCTGGA 112 consensus_9182#0 AATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCC--CGGACAAGG--CACGCCGTC 531 consensus_9182#5 AATGACCAGATTCCACCGTGCACCGCGTCCGTCGGGGC--CGGACAAGG--CACGCCGTC 118 consensus_9182#6 AA-----ATGGTCCAGCGACTGACGCTTCGACGACGCT--TGGTCGTAC--AACACCAAG 99 consensus_9182#1 GCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGG 265 consensus_9182#2 AT----TATGTTCATCAATATGATGCTGTTTAAAAACTC-CGAACCCTTCCACGGCTGCG 125 consensus_9182#4 AG----CAAGAGCCTGTGTAAAGAGGCGACTTTTAATT---TAGAAGAAAAAAAAAACGC 122 consensus_9182#3 GCAGACACCCCGGCGGCACCGACCCC--CTCGGACTCTGCGGCCG-GCTCGCAGCGCGGC 168 consensus_9182#7 GCAGACACCCCGGCGGCACCGACCCC--CTCGGACTCTGCGGCCG-GCTCGCAGCGCGGC 169 consensus_9182#0 TCGGATACAAGGTCAAGCAGGGCTTC--TCCATCTTCCGTATTCGTGTCCGTCGTGGTGG 589 consensus_9182#5 TCGGATACAAGGCCAAGCAGGGCTTC--TCCATCTTCCGTATTCGTGTCCGTCGTGGCGG 176 consensus_9182#6 TCTAACAAAC--GCCGTATTGTTCGC--ACACCAGTGGCCGTCTGGTTTACCAGTACGTG 155 consensus_9182#1 GATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGA 325 consensus_9182#2 ACGAGTTCATGTTCGAGGGCCAGAACGAGCTGCAGCGCACGTTCGTGTTCATTGCGCTGN 185 consensus_9182#4 ACAAACTTACACACTTAACCGCTCGCTCTCACCAATCCACCAAAACGGATCCGGTGCCGG 182 * * consensus_9182#3 TCGACCCGCGGCTCGTCGTCCCGCAAGGCAAAGAAGGCCCCATCCTCG-GTCTTCGTTCT 227 consensus_9182#7 TCGACCCGCGGCTCGTCGTCCCGCAAGGCA------------------------------ 199 consensus_9182#0 CCG-CAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGA-GCCATGGTGTC 647 consensus_9182#5 CCG-TAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGA-GTCATGGTGTC 234 consensus_9182#6 AAG--AAACGCCGTACCCTCCCGAAATGCGGGCAGTGCAAGAAGGAGCTGAACGGGATNN 213 consensus_9182#1 ACGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGT 385 consensus_9182#2 TCT--GCATTCCCTGGATTGCTGCTCGGCAAGCCGTTCTATTTGATGTTCAAGCGCAAGA 243 consensus_9182#4 TCACAGTGTGGCTGGCTGGCC-GTGTGCTAAGCCGTACTTTCGCGTCA--TCGCGTCTAA 239 * * consensus_9182#3 C-TTCTCCCAGAAGCA-GATCGCCGAATTCAAAGAGGCTTTCGCGCTAATCGACACCAAC 285 consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 A-ACCAGCTCAAGCCG-TACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCC 705 consensus_9182#5 A-ACCAGCTCAAGCCG-TACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCC 292 consensus_9182#6 A-AGCCCTCCCGGGCG-TGCGAGCGCCCGCGTATGAGGCCGGCGGCTGAAGANCGNT--C 269 consensus_9182#1 ACACCGGATACAAGGA-CATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCAC 444 consensus_9182#2 ACGNGTTCGCGAACCAATCCCGAACAATGGCGACGTACACCAGTGCGGTGACGCTGAACC 303 consensus_9182#4 ACGCTCTTCACAGGCCAAGACGACGCGCGCAG-CAAACAACGACAAACCCGGCGACAGCG 298 consensus_9182#3 GGCAAGATCGATGGCGAGAAGTTCCGCTTCGCCCTGACCCACTGGGGCCAGG--ACAAGT 343 consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 GGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGT 765 consensus_9182#5 GGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGT 352 consensus_9182#6 AACCGTAACGGTTCN--GTGGTGTCCTTGTGCCACCACTGTTCTNGCGTTAG---CGCAT 324 consensus_9182#1 ATTCTGCACGATCGC--GCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGC 502 consensus_9182#2 AATTCCTACCAGCCGAAACACACGATTCGCACGACGATGAGCCGATTGGCGGNAATCTTC 363 consensus_9182#4 GTGCTGTACTCTCTGCTGACAGTGGTTTACATCATAGTAGGTACTGCATCCTGCGGGACT 358 consensus_9182#3 TCAC-CGAGGACGAGGTTGACGATGCATTCGATCAGATGGTCATTGACGATAAGGGC-TA 401 consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 ACTT-TGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTT 824 consensus_9182#5 ACTT-TGAGGTCATCATGGTCGATCCCGCCCATAACGCTATCCGTCGTGACCCGAACGTT 411 consensus_9182#6 TATC-CGGGGCATTTCTGGATTCGAACGAAGGCAGAAAGGNCGTTGAAAGTGCTGGCGCT 383 consensus_9182#1 TGAC-CGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCC 561 consensus_9182#2 ATCCATCAGGCATTCACACGATCGAGTACGTGCTCAGTACCGTGTCAGCACACTGGNGTC 423 consensus_9182#4 GATTTTCGGCATGCATTAGTTCATCTAAAAGGCAAACAATTTGAAAAGAAAACAACAATA 418 consensus_9182#3 CATCGACACTGCTGCTCTGATCGGCATGCTCACCGGATCCGAGGAGGGAGAG--GAAGAA 459 consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 AACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGA 884 consensus_9182#5 AACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGA 471 consensus_9182#6 CAGN-------------------------------------------------------- 387 consensus_9182#1 TACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCC 621 consensus_9182#2 TAACTGCGGTACTGTGGGGCTCTGTCCCTTGCCATGNCCCAACTGTCCGAAGGTGCTGTG 483 consensus_9182#4 AGTTTAAACCCTTTCTGTGTGAACTTTGGAAATACGCACGGGGCTACGGAAAGCATGTGA 478 consensus_9182#3 TAAATTTTATAATTAAAAGCCAAAAACAAAACCAAAAAACTAACCTAAAAAAAATCTAAA 519 consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 AAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGT 944 consensus_9182#5 AAGAGTT----------------------------------------------------- 478 consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 TCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTG 681 consensus_9182#2 GAACATGGTGCTAGTCGATGGGGCTTGAAGCAAAACCTCCTTACAAAGGGTTGCCATCAT 543 consensus_9182#4 AAGTGTGTTTTTGGAAGTGCTAAAGTTGTGTTGAAACCGAAATCTTTC------------ 526 consensus_9182#3 CAATGAATTCTGTTTATTTTGTATAACTAAAAAAAAAAAAAGGCCACATGTGCCCGAGCG 579 consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 CGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCG 1004 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 AAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCC----- 736 consensus_9182#2 TGCCTGTACTTATGTCTNTNTGGCGCCTGGTACCCTGTNTACGCTCGCCATTACTCGTCN 603 consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 G----------------------------------------------------------- 580 consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 CACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAA 1064 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ------------------------------------------------------------ consensus_9182#2 CATG-------------------------------------------------------- 607 consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 ------------------------------------------------------------ consensus_9182#7 ------------------------------------------------------------ consensus_9182#0 CGTAATAAACATCTGATGAAAACATCTAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAA 1124 consensus_9182#5 ------------------------------------------------------------ consensus_9182#6 ------------------------------------------------------------ consensus_9182#1 ------------------------------------------------------------ consensus_9182#2 ------------------------------------------------------------ consensus_9182#4 ------------------------------------------------------------ consensus_9182#3 -------------------------- consensus_9182#7 -------------------------- consensus_9182#0 AAAGGCCAAATGTGCCCGAGCGGGGG 1150 consensus_9182#5 -------------------------- consensus_9182#6 -------------------------- consensus_9182#1 -------------------------- consensus_9182#2 -------------------------- consensus_9182#4 -------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||