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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9193#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1322 fasta sequence
[CCGGCGACATCCGTTCTCGATTACCACGTTCGAGGATTACGTGTACTGGACCGATTGGGACAAGGAGGCCGTCTTTAAGGCGAACAAATTCACCGGCAAAGACGTAGAGCCGGTAACGGCAATGCATATGCTGCAACACCCGATGACGATTCACGTGTACCACCCGTACCGCCAGCCGGACGGCGTCAACCACTGTCAGGCGGTGAACGGCCACTGTTCGCATCTGTGCCTGCCGGCGCCCCAAATTAACGCCAACAGTCCGAAGATTTCCTGCGCCTGCCCGACCGGCCTGAAGCTGATGAGCGACAGCTTGATGTGCGTGGAGGACGAAAAACCCACGGCCGGGCCGGCGGGCGAGGATGGCACGAGCAGCGGCCGGATCGATAGCAACAATGCGACGATGCGAAATGGTACGGACGGTACGATCATCCACCCGGGCGTGGTCGAGAAGGACTCCGGCCAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCGGATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAAACTCGACCACGATGAACTTTGACAATCCGGTGTACCGAAAAACGACCGAGGACCAGTTCAGCCTGGAGAAGAACATACAGAGCCGCATGTACCCGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCGGCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCACTGACCAAAAACCAAAATGCGCACAAAATTTCAACGTGGCTGTTAAGCAGTAAGCAGTTAAACGGATAAGCAGAAGCAAAGAGTGAAGCAACAACAAACCCCACCCGCTCAAATATTAAGCTAAATTAAAAACGGTGGTAGTAAGCAGTAGAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGA--AGAAGAAGAACAACTAGAAGAAGACTAAGAAGAAAGCAAAAACAATTCTGCATCTTTGTCCTAATCGAGCGACGGAAGTCAAACCAACCAACAACTCAAAATAGTTTCCGATCAAGCTCTCAATCAAAACCAGTTAAACCTGTGTAATTGTGTGCAATATTAAGTTAAAATCAAAGCAAAGCAAACATACAAATACTCACCAACCAGGAACGGCAACAGTAGTAGTAAGGGAAGAACATTCGAGGCGACGAATACGATTTATGATCCTTTTTTTTCTAATACGATTAATTTCTAATACGATTGATTAATACCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTTAGCTAAGTTTGTGCCTTATTGTTTTTTTGATTCTTCATCTGTGTGACAGTTAA]
[+] EMBL BM631166 [CCGGCGACATCCGTTCTCGATTACCACGTTCGAGGATTACGTGTACTGGACCGATTGGGACAAGGAGGCCGTCTTTAAGGCGAACAAATTCACCGGCAAAGACGTAGAGCCGGTAACGGCAATGCATATGCTGCAACACCCGATGACGATTCACGTGTACCACCCGTACCGCCAGCCGGACGGCGTCAACCACTGTCAGGCGGTGAACGGCCACTGTTCGCATCTGTGCCTGCCGGCGCCCCAAATTAACGCCAACAGTCCGAAGATTTCCTGCGCCTGCCCGACCGGCCTGAAGCTGATGAGCGACAGCTTGATGTGCGTGGAGGACGAAAAACCCACGGCCGGGCCGGCGGGCGAGGATGGCACGAGCAGCGGCCGGATCGATAGCAACAATGCGACGATGCGAAATGGTACGGACGGTACGATCATCCACCCGGGCGTGGTCGAGAAGGACTCCGGCCAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCGGATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAAACTCGACCACGATGAACTTTGACAATCCGGTGTACCGAAAAACGACCGAGGACCAGTTCAGCCTGGAGAAGAACATA ]
[+] EMBL BM629911 [ ccgGTACCACCCGTACCGCCAGCCGGACGGCGTCAACCACTGTCAGGCGGTGAACGGCCACTGTTCGCATCTGTGCCTGCCGGCGCCCCAAATTAACGCCAACAGTCCGAAGATTTCCTGCGCCTGCCCGACCGGCCTGAAGCTGATGAGCGACAGCTTGATGTGCGTGGAGGACGAAAAACCCACGGCCGGGCAGGCGGGCGAGGATGGCACGAGCAGCGGCCGGATCGATAGCAACAATGCGACGATGCGAAATGGTACGGACGGTACGATCATCCACCCGGGCGTGGTCGAGAAGGACTCCGGCCAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCGGATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAAACTCGACCACGATGAACTTTGACAATCCGGTGTACCGAAAAACGACCGAGGACCAGTTCAGCCTGGAGAAGAACATACAGAGCCGCATGTACCCGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCGGCCGGCCACCAA ]
[+] EMBL BM638947 [ CCGGGCCGGCGGGCGAGGATGGCACGAGCAGCGGCCGGGTCGATAGCAACAATGCGACGATGCGAAATGGTACGGACGGTACGATCATCCACCCGGGCGTGGTCGAGAAGGACTCCGGCCAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCGGATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAAACTCGACCACGATGAACTTTGACAATCCGGTGTACCGAAAAACGACCGAGGACCAGTTCAGCCTGGAGAAGAACATACAGAGCCGCATGTACCCGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCGGCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCACTGACCAAAAACCAAAATGCGCACAAAATTTCAACGTGGCTGTTAAGCAGTAAGCAGTTAAACGGATAAGCAGAAGCAAAGAGTGAAGCAACAACAAACCCCACCCGCTCAAATATTAAGCTAAATTAAAAACGGTGGTAGTAAGCAGTAGAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAGAAGAAGAACAACTAGAAGAAGATTAAGAAGAAAGCAAAAACAATTCTGCATCTTTGTCCTAACCGAGCGACGGAAGTCAAACCAACCAACAACTCAAAATAGTTTCCGATCAAGCTC ]
[+] EMBL BM655324 [ ccgCGAAAAACGACCGAGGACCAGTTCAGCCTGGAGAAGAACATACAGAGCCGCATGTACCCGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCGGCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCACTGACCAAAAACCAAAATGCGCACAAAATTTCAACGTGGCTGTTAAGCAGTAAGCAGTTAAACGGATAAGCAGAAGCAAAGAGTGAAGCAACAACAAACCCCACCCGCTCAAATATTAAGCTAAATTAAAAACGGTGGTAGTAAGCAGTAGAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGA AGAAGAAGAACAACTAGAAGAAGACTAAGAAGAAAGCAAAAACAATTCTGCATCTTTGTCCTAATCGAGCGACGGAAGTCAAACCAACCAACAACTCAAAATAGTTTCCGATCAAGCTCTCAATCAAAACCAGTTAAACCTGTGTAATTGTGTGCAATATTAAGTTAAAATCAAAGCAAAGCAAACATACAAATACTCACCAACCAGGAACGGCAACAGTAGTAGTAAGGGAAGAACATTCGAGGCGACGAATACGATTTATGATCCTTTTTTTTCTAATACGATTAATTTCTAATACGATTGATTAATACCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTT ]
[+] EMBL BM581539 [ AGAAGAAGAAGA AGAAGAAGAACAACTAGAAGAAGACTAAGAAGAAAGCAAAAACAATTCTGCATCTTTGTCCTAATCGAGCGACGGAAGTCAAACCAACCAACAACTCAAAATAGTTTCCGATCAAGCTCTCAATCAAAACCAGTTAAACCTGTGTAATTGTGTGCAATATTAAGTTAAAATCAAAGCAAAGCAAACATACAAATACTCACCAACCAGGAACGGCAACAGTAGTAGTAAGGGAAGAACATTCGAGGCGACGAATACGATTTATGATCCTTTTTTTTCTAATACGATTAATTTCTAATACGATTGATTAATACCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTTAGCTAAGTTTGTGCCTTATTGTTTTTTTGATTCTTCATCTGTGTGACAGTTAA]
[+] EMBL BX611721 [ ACAATTCTGCATCTTTGTCCTAATCGAGCGACGGAAGTCAAACCAACCAACAACTCAAAATAGTTTCCGATCAAGCTCTCAATCAAAACCAGTTAAACCTGTGTAATTGTGTGCAATATTAAGTTAAAATCAAAGCAAAGCAAACATACAAATACTCACCAACCAGGAACGGCAACAGTAGTAGTAAGGGAAGAACATTCGAGGCGACGAATACGATTTATGATCCTTTTTTTTCTAATACGATTAATTTCTAATACGATTGATTAATACCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTTAGCTAAGTTTGTGCC ]
consensusID : consensus_9193#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1003 fasta sequence
[ATTCCTCGAGCACTGTTGGCCTACTGGAAATTGGATACGATTAATTTCTAATACGATTGATTAATGCCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTTAGCTAAGTTTGTGCCTTATTGTTTTTTTGATTCTTCATCTGTG-TGACAGTTAAACCCCATCCCTATTTACTACACACACACACACACATTAGCACATTCAGCCTGTTTAGTGATAGGGCACAGAGGATTCTCACCTTCCCTAAGACAGTTGGCGCACATGATCGTGGAGTGTGTGGAGTGTACAAGTCGCTCGAAGGCTTCGAGCTATACGCAAGAAAGTACGCCAACTGTTTCAGAAAACAGTGAAAACTCCTTCAAGTTTAGTAATTGGTTTTCCCCTTCCTTTCCTTTTCGAATGATTTGCTGCTATCAAGTT-GCGACCGATCAAACGATCACGCACTGTTGTACCCACGAGAGTGGGAGGGCAGTAAATCGACCAAAGGAAAGGGTTCACTACAGCTCTACTCTTGTATTGTAAAGTCAAATTTCAGCTTCAAGTTAGTTTAAATTTAGATAGTGGAAAACGGTTGACAGTAAGCATAGCTCGCTCGAAACGCTGAGGTCCGGTTTGCTGCGGTGGTCAATGTTTGTTAGCAAAATCTATTCGGGAAACGGTGATCAGGTGTG-TGTGTGT-G-GGGG-GCAGTTTATGCTCCAGCGCGGTGACG-TTTATTTAAGTGTGTTACTTTACAGCGTGTTTTAAGGTACAGCAGAAGTAAAGGCTGTATAAAGGAGGAGGTGAGAAAACTCCCACAGGAAGTTAGAAGTTCCGACGCCGGATAGGGAAGGCAGACGATCCACCTGGATGGATCGGGTGCGTCC-AATTAATAGTCCCGACTAACTAGAGCGGTAGT-TGTAAATACACGTAGTTCTTTATGTTTTTTTGGTTGAACACTGTTGCCTTTCTTTCTTTCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCACATGTGCT]
[-] EMBL CNS09MBZ [ATTCCTCGAGCACTGTTGGCCTACTGGAAATTGGATACGATTAATTTCTAATACGATTGATTAATGCCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTTAGCTAAGTTTGTGCCTTATTGTTTTTTTGATTCTTCATCTGTG TGACAGTTAAACCCCATCCCTATTTACTAAAAAAAAACACACACATTAGCACATTCAGCCTGTTTAGTGATAGGGCACAGAGGATTCTCACCTTCCCTAAGACAGTTGGCGCACATGATCGTGGAGTGTGTGGAGTGTACAAGTCGCTCGAAGGCTTCGAGCTATACGCAAGAAAGTACGCCAACTGTTTCAGAAAACAGTGAAAACTCCTTCAAGTTTAGTAATTGGTTTTCCCCTTCCTTTCCTTTTCGAATGATTTGCTGCTATCAAGTTCGCGACCGATCAAACGATCACGCACTGTTGTACCCACGAGAGTGGGAGGGCAGTAAATCGACCAAAGGAAAGGGTTCACTACAGCTCTACTCTTGTATTGTAAAGTCAAATTTCAGCTTCAAGTTAGTTTAAATTTAGATAGTGGAAAACGGTTGACAGTAAGCATAGCTCGCTCGAAACGCTGAGGTCCGGTTTGCTGCGGTGGTCAATGTTTGTTAGCAAAATCTATTCGGGAAACGGTGATCAGGTGTG TGTGTGT G GGGG GCAGTTTATGCTCCAGCGCGGTGACG TTTATTTAAGTGTGTTACTTTACAGCGTGTTTTAAGGTACAGCAGAAGTAAAGGCTGTATAAAGGAGGAGGTGAGAAAACTCCCACAGGAAGTTAGAAGTTCCGACGCCGGATAGGGAAGGCAGACGATCCACCTGGATGGATCGGGTGCGTCC AATTAATAGTCCCGACTAACTAGAGCGGTAGT TGTAAATACACGTAGTTCTTTATGTTTTTTTGGTTGAACACTGTTGCCTTTCT ]
[+] EMBL CNS09MBY [ ATACGATTGATTAATGCCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTTAGCTAAGTTTGTGCCTTATTGTTTTTTTGATTCTTCATCTGTG TGACAGTTAAACCCCATCCCTATTTACTACACACACACACACACATTAGCACATTCAGCCTGTTTAGTGATAGGGCACAGAGGATTCTCACCTTCCCTAAGACAGTTGGCGCACATGATCGTGGAGTGTGTGGAGTGTACAAGTCGCTCGAAGGCTTCGAGCTATACGCAAGAAAGTACGCCAACTGTTTCAGAAAACAGTGAAAACTCCTTCAAGTTTAGTAATTGGTTTTCCCCTTCCTTTCCTTTTCGAATGATTTGCTGCTATCAAGTT GCGACCGATCAAACGATCACGCACTGTTGTACCCACGAGAGT GGAGGGCAGTAAATCGACCAAAGGAAAGGGTTCACTACAGCTCTACTCTTGTATTGTAAAGTCAAATTTCAGCTTCAAGTTAGTTTAAATTTAGATAGTGGAAAACGGTTGACAGTAAGCATAGCTCGCTCGAAACGCTGAGGTCCGGTTTGCTGCGGTGGTCAATGTTTGTTAGCAAAATCTATTCGGGAAACGGTGATCAGGTGTG TGTGTGT G GGGG GCAGTTTATGCTCCAGCGCGGTGACG TTTATTTAAGTGTGTTACTTTACAGCGTGTTTTAAGGTACAGCAGAAGTAAAGGCTGTATAAAGGAGGAGGTGAGAAAACTCCCACAGGAAGTTAGAAGTTCCGACGCCGGATAGGGAAGGCAGACGATCCACCTGGATGGATCGGGTGCGTCC AATTAATAGTCCCGACTAACTAGAGCGGTAGT TGTAAATACACGTAGTTCTTTATGTTTTTTTGGTTGAACACTGTTGCCTTTCTTTCTTTCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCACATGTGCT]
[+] EMBL CNS09P6K [ TCATCTGTGCTGACAGTAAAACCCCATCCCTATTTACTACACACACACACACACATTAGCACATTCAGCCTGTTTAGTGATAGGGCACAGAGGATTCTCACCTTCCCTAAGACAGTTGGCGCACATGATCGTGGAGTGTGTGGAGTGTACAAGTCGCTCGAAGGCTTCGAGCTATACGCAAGACAGTACGCCAACTGTTTCAGAAAACAGTGAAAACTCCTTCAAGTTTAGTAATTGGTTTTCCCCTTCCTTTCCTTTTCGAATGATTTGCTGCTATCAAGTT GCGACCGATCAAACGATCACGCACTGTTGTACCCACGAGAGTGGATGGGCAGTAAATCGACCAAAGGAAAGGGTTCACTACAGCTCTACTCTTGTATTGTAAAGTCAAATTTCAGCTTCAAGTTAGTTTAAATTTAGATAGTGGAAAACGGTTGACAGTAAGCATAGCTCGCTCGAAACGCTGAG ]
[+] EMBL BM622706 [ ccgAGTTAAACCCCATCCCTATTTACT ACACACACACACATTAGCACATTTAGCCTGTTTAGTGATAGGGTACAGAGGATTCTCACCTTCCCTAGGACAGTTGGCGCACATGATCGTGGAGTGTGTGGAGTGTACAAGTCGCTCGAAGGCTTCGAGCTATACGCAAGAAAGAACGCCAACTGTTTCAGAAAA TGTGAAAACTCCTTCAAGTTTAGTAATTGGTTTTCCCCTTCCTTTTCTTTTCGAATGATTCGCTGCTATCAAGTT GCGACCGATCAAACGATCACGCACTGTTGTACCCACGAGAGTGGGAGGGCAGTAAATCGACCAAGGGAAAGGGTTCACAACAGTTCTACTCTTGTATTGTAAAGTCAAATTTCAGCTTCAAGTTAGTTTAAATTTAGATAGTGGAAAACGGTTGACAGTAAGCATAGCTCGCTCGAAACGCTGAGGTCCGGTTTGCTGCGGTGGTCAATGTTTGTTAGCAAAATCTATTCGGGAAACGGTGATCAGGTGTGTTTTGGGTGG GGGG GCAGTTTATGCTCCGGCGCGGTGACGTTTTATTTAAGTGTGTTACTTTACAG ]
[-] EMBL BX611720 [ ACATGATCGTGGAGTGTTTGGAGTGTACAAGTCGCTCGAAGGCTTCGAGCTATACGCAAGAAAGTACGCCAACTGTTTCAGAAAACAGTGAAAACTCCTTCAAGTTTAGTCATTGGTTTTCCCCTTCCTTTCCTTTTCGAATGATTTGCTGCTATCAAGTT GCGATCGATCAAACTATCACGCACTGTTGTACCCACGAGAGTGGGAGGGCAGTAAATCGACCAAAGGAAAAGGTTCACAACAGTTCTACTCTTGCATTGTAAAGTCAAATTTCAGCTTCAAGTTAGTTTAAATTTAGATAGTGGAAAACGGTTGACAGTAAGCATAGCTCGCTCGAAACGCTGAGGTCCGGTTTGCTGCGGTGGTCAATGTTTGTTAGCAAAATCTATTCGGGAAACGGTGATCAGGTGTG TGTGTGT GTGGGGAGCAGTTTATGCTCCAGCGCGGTGACG TTTATTTAAGTGTGTTACTTTACAGCGTGTTTTAAGGTACAGCAGAAGTAAAGGCTGTATAAAGGAGGAGGTGAGAAAACTCCCACAGGAAGTTAGAAATTCCGACGCCGGATAGGGAAGGCAGATGATCCACCTGGATGGATCGGGTGCGTCC AATTAATAGTCCCGACTAACTAGAGCGGTAGT TGTAAATACACGTAGTTCTTTATGTTT ]
[-] EMBL CNS09P6L [ ATCGACCAAAGGAAAGGGTTCACTACAGCTCTACTCTTGTATTGTAAAGTCAAATTTCAGCTTCAAGTTAGTTTAAATTTAGATAGTGGAAAACGGTTGACAGTAAGCATTGCTCGCTCGAAACGCTGAGGTCCGGTTTGCTGCGGTGGTCAATGTTTGTTAGCAAAATCTATTCGGGAAACGGTGATCAGGTGTG TGTGTGT G GGGG GCAGTTTATGCTCCAGCGCGGTGACG TTTATTTAAGTGTGTTACTTTACAGCGTGTTTTAAGGTACAGCAGAAGTAAAGGCTGTATAAAGGAGGAGGTGAGAAAACTCCCACAGGAAGTTAGAAGTTCCGACGCCGGATAGGGAAGGCAGACGATCCACCTGGATGGATCGGGTGCGTCCTAATTAATAGTCCCGACTAACTAGAGCGGTAGTGTGTAAAT ]
consensusID : consensus_9193#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 724 fasta sequence
[CGAGCTGACGAACTTCGACGGCAACATGGGCAAGGTGTTGATTCAGGACGATTTGGAAATTCCGCGTGCGATTGCGTTGGACCCTATCGACGGTTGGATGTACTGGACCGATTGGGGCACCAATCCAAGAATTGAGCGTGCTGGTATGGACGGTACCCACCGGCAAGTGATTGTCAGCTACGAGGTGAAGTGGCCGAACGGAATCACACTGGATTTGGTGCGAAAGCGTGTGTATTGGGTCGATGCGAAGCTGAACGTCATCTCGTCCTGCAACTACGACGGCTCCAAGCGCTCGGTAATACTGTACTCGGCCGACTATCTGCGACATCCGTTCTCGATTACCACGTTCGAGGATTACGTGTACTGGACCGATTGGGACAAGGAGGCCGTCTTTAAGGCGAACAAATTCACTGGCAAAGACGTCGAGCCGGTAACGGCAATGCATATGCTGCAACACCCGTGTACCACCCGTACCGCCAGCCGGACGGCGTCAACCACTGTCAGGCGGTGAACGGCCACTGTTCGCATCTGTGCCTGCCGGCGCCCCAAATTAACGCCAACAGTCCGAAGATTTCCTGCGCCTGCCCGACCGGCCTGAAGCTGATGAGCGACAGCTTGATGTGCGTGGAGGACGAAAAACCCACGGCCGGGCAGGCGGGCGANGATGGCACGAGCAGCGGCCGGATCGATAGCAACAATGCGACGATGCGAAATGGTACGGACG]
[+] EMBL BX627946 [CGAGCTGACGAACTTCGACGGCAACATGGGCAAGGTGTTGATTCAGGACGATTTGGAAATTCCGCGTGCGATTGCGTTGGACCCTATCGACGGTTGGATGTACTGGACCGATTGGGGCACCAATCCAAGAATTGAGCGTGCTGGTATGGACGGTACCCACCGGCAAGTGATTGTCAGCTACGAGGTGAAGTGGCCGAACGGAATCACACTGGATTTGGTGCGAAAGCGTGTGTATTGGGTCGATGCGAAGCTGAACGTCATCTCGTCCTGCAACTACGACGGCTCCAAGCGCTCGGTAATACTGTACTCGGCCGACTATCTGCGACATCCGTTCTCGATTACCACGTTCGAGGATTACGTGTACTGGACCGATTGGGACAAGGAGGCCGTCTTTAAGGCGAACAAATTCACTGGCAAAGACGTCGAGCCGGTAACGGCAATGCATATGCTGCAACACCCGTGTACCACCCGTACCGCCAGCCGGACGGCGTCAACCACTGTCAGGCGGTGAACGGCCACTGTTCGCATCTGTGCCTGCCGGCGCCCCAAATTAACGCCAACAGTCCGAAGATTTCCTGCGCCTGCCCGACCGGCCTGAAGCTGATGAGCGACAGCTTGATGTGCGTGGAGGACGAAAAACCCACGGCCGGGCAGGCGGGCGANGATGGCACGAGCAGCGGCCGGATCGATAGCAACAATGCGACGATGCGAAATGGTACGGACG]
consensusID : consensus_9193#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 710 fasta sequence
[CCGATCAGTGTGTGCTGTGTTTGTCGGAACAGTAGCTTAGACGTTAATTAAAAGTATCCGGATTAGGACAGCGGAAGGATGTAAGGGAAACTGCGGCAAAAAAAAAAAATTCCGAACGGAAAAAAGAGAGAAAGAAAGAGAGAGGGAGGGAGTGAAAGACAAAAAAGTAACAAAGCGCAACGCGGGCCAAGCGTGGCCTGCCTCCTCCAAAAACGCACCTCTGTACAGTCCACTATCAAGACCACTATCAAGACCACCACACACTAGCAAGATCGTCATCATCCGCTGCTGCCACAAAAATCATCTGCCCTCGATTGCACGTAATTTATGTGTGTGCTGTCTGTGTGTGTGCGTGGGTGTGTGTGTGTGTGTGTGGTTAGAGCTTTTTCTTCGACACGAAACGATCACGCCAAACTGCACAACCATCAGCACAAATGACGGCGTTGGTGAACTTCTGCCGCACGCTCTAACTGCTCAACCAGCCTGCGCTCACAGATACACACACTCACATACAACACCATCGCGCACACTTACCGAAGGACACACACCGGATGTGTCCCCGCTCATCCCGACCACACGCGGGAAGGCACAGGAACCACTGACCCGGCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCACTGACCAAAAACCAAAATGCGCACAAAATTTCAACGTGGCTGTTAAAGCAGTAAGCAGTTA]
[+] EMBL BM653559 [CCGATCAGTGTGTGCTGTGTTTGTCGGAACAGTAGCTTAGACGTTAATTAAAAGTATCCGGATTAGGACAGCGGAAGGATGTAAGGGAAACTGCGGCAAAAAAAAAAAATTCCGAACGGAAAAAAGAGAGAAAGAAAGAGAGAGGGAGGGAGTGAAAGACAAAAAAGTAACAAAGCGCAACGCGGGCCAAGCGTGGCCTGCCTCCTCCAAAAACGCACCTCTGTACAGTCCACTATCAAGACCACTATCAAGACCACCACACACTAGCAAGATCGTCATCATCCGCTGCTGCCACAAAAATCATCTGCCCTCGATTGCACGTAATTTATGTGTGTGCTGTCTGTGTGTGTGCGTGGGTGTGTGTGTGTGTGTGTGGTTAGAGCTTTTTCTTCGACACGAAACGATCACGCCAAACTGCACAACCATCAGCACAAATGACGGCGTTGGTGAACTTCTGCCGCACGCTCTAACTGCTCAACCAGCCTGCGCTCACAGATACACACACTCACATACAACACCATCGCGCACACTTACCGAAGGACACACACCGGATGTGTCCCCGCTCATCCCGACCACACGCGGGAAGGCACAGGAACCACTGACCCGGCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCACTGACCAAAAACCAAAATGCGCACAAAATTTCAACGTGGCTGTTAAAGCAGTAAGCAGTTA]
consensusID : consensus_9193#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTGTCTATTCCCCCTTTTTGCTCCACTCAATTGTGCACTGTGCGCCCGCCCGTTTAATAAATGGATATTTATAATAGCGACGATGCGAAATGGTACGGACGGTACGATCATCCACCCGGGCGTGGTCGAGAAGGACTCCGGCCAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCGGATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAAACTCGACCACGATGAACTTTGACAATCCGGTGTACCGAAAAACGACCGAGGACCAGTTCAGCCTGGAGAAGAACATACAGAGCCGCATGTACCCGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCGGCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCTCTGACCAAAAACCAAAATGCGCACAAAATTTCAACGTGGCTGTTAAGCAGTAAGCAGTTAAACGGATAAGCAGAAGCAAAGAGTGAAGCAACAACAAACCCCACCCGCTCAAATATTAAGCTAAATTAAA]
[+] EMBL BM608830 [CCGCCCACGCGTCCGCCCACGCGTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTGTCTATTCCCCCTTTTTGCTCCACTCAATTGTGCACTGTGCGCCCGCCCGTTTAATAAATGGATATTTATAATAGCGACGATGCGAAATGGTACGGACGGTACGATCATCCACCCGGGCGTGGTCGAGAAGGACTCCGGCCAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCGGATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAAACTCGACCACGATGAACTTTGACAATCCGGTGTACCGAAAAACGACCGAGGACCAGTTCAGCCTGGAGAAGAACATACAGAGCCGCATGTACCCGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCGGCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCTCTGACCAAAAACCAAAATGCGCACAAAATTTCAACGTGGCTGTTAAGCAGTAAGCAGTTAAACGGATAAGCAGAAGCAAAGAGTGAAGCAACAACAAACCCCACCCGCTCAAATATTAAGCTAAATTAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9193#0 CCGGCGACATCCGTTCTCGATTACCACGTTCGAGGATTACGTGTACTGGACCGATTGGGA 60
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 ------------------------------------------------------------
consensus_9193#0 CAAGGAGGCCGTCTTTAAGGCGAACAAATTCACCGGCAAAGACGTAGAGCCGGTAACGGC 120
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ---------CCGATCAGTGTGTGCTGTGTTTGTCGGAACAGTAGCTTAGACGTTAATTA- 50
consensus_9193#1 --------------------------ATTCCTCGAGCACTGTTGGCCTACTGGAAATTG- 33
consensus_9193#0 AATGCATATGCTGCAACACCCGATGACGATTCACGTGTACCACCCGTACCGCCAGCCGGA 180
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 AAAGTATCCGGATTAGGACAGCGGAAGGATGTAAGGGAAACTGCGGCAAAAAAAAAAAAT 110
consensus_9193#1 GATACGATTAATTTCTAATACGAT--TGATTAATGCCTGTACACACTTCAAACAGATTCT 91
consensus_9193#0 CGGCGTCAACCACTGTCAGGCGGTGAACGGCCACTGTTCGCA-TCTGTGCCT-GCCGGCG 238
consensus_9193#4 -------------------------------------CCGCC-CACGCGTCC-GCCCACG 21
consensus_9193#2 -------------------CGAGCTGACGAACTTCGACGGCAACATGGGCAA-GGTGTTG 40
consensus_9193#3 TCCGAACGGAAAAAAGAGAGAAAGAAAGAGAGAGGGAGGGAGTGAAAGACAA-AAAAGTA 169
consensus_9193#1 ACCGACCGGGCTATGTTAGCTAAGTTTGTGCCTTATTGTTTTTTTGATTCTTCATCTGTG 151
consensus_9193#0 CCCCAAATTAACGCCAACAGTCCGAAGATTTCCTGCGCCTGCCCGACCGGC--CTGAAGC 296
consensus_9193#4 CGTCCGTCTTTCTCTCTCTCTCTC----TCTCTCTCTCTTTCTCTCTCTCT--CTCTGTC 75
consensus_9193#2 ATTCAGGACGATTTGGAAATTCCGCGTGCGATTGCGTTGGACCCTATCGACGGTTGGATG 100
consensus_9193#3 ACAAAGCGCAACGCGGGCCAAGCG----TGGCCTGCCTCCTCCAAAAACGCACCTCTGTA 225
consensus_9193#1 TGACAGTTAAACCCCATCCCTATTTACTACACACACACACACACATTAGCACATTCAGCC 211
* *
consensus_9193#0 TGATGAGCGACAGCTTGATGTGCGTGGAGGACGAAAAACCC--------ACGGCCGGG-C 347
consensus_9193#4 TATTC--CCCCTTTTTGCTCCACTC--------AATTGTGC--------ACTGTGCGC-C 116
consensus_9193#2 TACTGGACCGATTGGGGCACCAATCCAAGAATTGAGCGTGCTGGTATGGACGGTACCCAC 160
consensus_9193#3 CAGTCCACTATCAAGACCACTATCAAGACCACCACACACTA------GCAAGATCGTCAT 279
consensus_9193#1 TGTTTAGTGATAGGGCACAGAGGAT--------TCTCACCTTCCCTAAGACAGTTGGCGC 263
* *
consensus_9193#0 CGGCGGGCGAGGATGGCACGAGCAGCGGCCGGATCGAT---AGCAACAAT-GCGACGATG 403
consensus_9193#4 CGCCCGTTTAATA------------------AATGGAT---ATTTATAATAGCGACGATG 155
consensus_9193#2 CGGCAAGTGATTGTCAGCTACGAGGTGAAGTGGCCGAACGGAATCACACTGGATTTGGTG 220
consensus_9193#3 CATCCGCTGCTGCC------------------ACAAAAATCATCTGCCCTCGATTGCACG 321
consensus_9193#1 ACATGATCGTGGAGTGT---------------GTGGAGTGTACAAGTCGCTCGAAGGCTT 308
* *
consensus_9193#0 CGAAATG-GTACG-GACGGTACGATCATCCACCCGGGCGTGGTCGAG------AAGGACT 455
consensus_9193#4 CGAAATG-GTACG-GACGGTACGATCATCCACCCGGGCGTGGTCGAG------AAGGACT 207
consensus_9193#2 CGAAAGC-GTGTG-TATTGGGTCGATGCGAAGCTGAACGTCATCTCGTCCTGCAACTACG 278
consensus_9193#3 TAATTTATGTGTG-TGCTGTCTGTGTGTGTGCGTGGGTGTGTGTGTG--------TGTGT 372
consensus_9193#1 CGAGCTATACGCAAGAAAGTACGCCAACTGTTTCAGAAAACAGTGAAAACTCCTTCAAGT 368
* *
consensus_9193#0 CCGGC--CAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCG- 512
consensus_9193#4 CCGGC--CAGGTGGCCCTCGTTGCCATCGTCATCGTTTCGTTGGTGTTGGTCATCGTCG- 264
consensus_9193#2 ACGGCTCCAAGCGCTCGGTAATACTGTACTCGGCCGACTATCTGCGACATCCGTTCTCG- 337
consensus_9193#3 GTGGTTAGAGCTTTTTCTTCGACACGAAACGATCACGCCAAACTGCACAACCATCAGCAC 432
consensus_9193#1 TTAGTAATTGGTTTTCCCC-TTCCTTTCCTTTTCGAATGATTTGCTGCTATCAA-GTTGC 426
* * *
consensus_9193#0 GATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAA-ACTCGACCACGATGAAC 571
consensus_9193#4 GATTGATTGTGTTCGTTCTCTACCGGCACTACACGCATCGAA-ACTCGACCACGATGAAC 323
consensus_9193#2 ATT--ACCACGTTCGAGGATTACGTGTACTGGACCGATTGGG-ACAAGGAGGCCGTCT-T 393
consensus_9193#3 AAATGACGGCGTTGGTGAACTTC---TGCCGCACGCTCTAACTGCTCAACCAGCCTGCGC 489
consensus_9193#1 GACCGATCAAAC-GATCACGCAC---TGTTGTACCCACGAGA-GTGGGAGGGCAGTAAAT 481
* * ** *
consensus_9193#0 TTT--GACAATCCGGTGTACCGAAAA-ACGACCGAGGACCAGTTCAGCCTGGAGAAGAAC 628
consensus_9193#4 TTT--GACAATCCGGTGTACCGAAAA-ACGACCGAGGACCAGTTCAGCCTGGAGAAGAAC 380
consensus_9193#2 TAA--GGCGAACAAATTCACTGGCAA-A-GACGTCGAGCCGGTAACGGC-AATGCATATG 448
consensus_9193#3 TCACAGATACACACACTCACATACAACACCATCGCGCACACTTACCGAAGGACACACACC 549
consensus_9193#1 CGACCAAAGGAAAGGGTTCACTACAGCTCTACTCTTGTATTGTAAAGTC--AAATTTCAG 539
* * * *
consensus_9193#0 ATACAGAGCCGCATGTACC-CGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCG 687
consensus_9193#4 ATACAGAGCCGCATGTACC-CGAGCACCGTCGGCGAAGAGGCACAGGAACCACTGACCCG 439
consensus_9193#2 CTGCAACACC-CGTGTACCACCCGTACCGCCAGCCGGACGGCGTC--AACCACTG--TCA 503
consensus_9193#3 GGATGTGTCCCCGCTCATCCCG---ACCACACGCGGGAAGGCACAGGAACCACTGACCCG 606
consensus_9193#1 CTTCAAGTTAGTTTAAATTTAG---ATAGTGGAAAACGGTTGACAGTAAGCATAG-CTCG 595
* * ** ** * *
consensus_9193#0 GCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCACTGACCAAAAACCAAAA 747
consensus_9193#4 GCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCTCTGACCAAAAACCAAAA 499
consensus_9193#2 GGCGGTGAACGGCCACTGTTCGCATCTGTGCCTGCCGGCGCCCCAAATTAACGCCAACAG 563
consensus_9193#3 GCCGGCCACCAACGATTTTGTGTGAGCGATGCGACCCGCGGCACTGACCAAAAACCAAAA 666
consensus_9193#1 CTCGAAACGCTGAGGTCCGGTTTG-CTGCGGTGGTCAATGTTTGTTAGCAAAATCTATTC 654
** * * * * * ** * *
consensus_9193#0 TGCGCACAAAATTTCAACGTGGCTGTTAA-GCAGTAAGCAGTTAAACGGATAAGCAGAAG 806
consensus_9193#4 TGCGCACAAAATTTCAACGTGGCTGTTAA-GCAGTAAGCAGTTAAACGGATAAGCAGAAG 558
consensus_9193#2 TCCGAAGATTTCCTGCGCCTGCCCGACCG-GCCTGAAGCTGATGAGCG-ACAGCTTGATG 621
consensus_9193#3 TGCGCACAAAATTTCAACGTGGCTGTTAAAGCAGTAAGCAGTTA---------------- 710
consensus_9193#1 GGGAAACGGTGATCAGGTGTGTGTGT----GTGGGGGGCAGTTTA-----TGCTCCAGCG 705
* ** * * ** * *
consensus_9193#0 CAAAGAGTGAAGCAACAACAAACCCCACCCGCTCAAATATTAAGCTAAATTAAAAACGGT 866
consensus_9193#4 CAAAGAGTGAAGCAACAACAAACCCCACCCGCTCAAATATTAAGCTAAATTAAA------ 612
consensus_9193#2 T---GCGTGGAGGACGAAAAACCCACGGCCGGGCAGGCGGGCGANGATGGCACGAGCAGC 678
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 CGGTGACGTTTATTTAAGTGTGTTACTTTACAGCGTGTTTTAAGGTACAGCAGAAGTAAA 765
consensus_9193#0 GGTAGTAAGCAGTAGAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGA 926
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 GGCCGGATCGATAGCAACAATGCGACGATGCGAAATGGTACGGACG-------------- 724
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 GGCTGTA-----TAAAGGAGGAGGTGAGAAAACTCCCACAGGAAGTTAGAAGTTCCGACG 820
consensus_9193#0 ACAACTAGAAGAAGACTAAGAAGAAAGCAAAAACAATTCTGCATCTTTGTCCTAATCGAG 986
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 CCGGATAGG-GAAGGCAGACGATCCACCTGGATGGATCGGGTGCGTCCAATTAATAGTCC 879
consensus_9193#0 CGACGGAAGTCAAACCAACCAACAACTCAAAATAGTTTCCGATCAAGCTCTCAATCAAAA 1046
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 CGACTAACTAGAGCGGTAGTTGTAAATACACGTAGTTCTTTATGTTTTTTTGGTTGAACA 939
consensus_9193#0 CCAGTTAAACCTGTGTAATTGTGTGCAATATTAAGTTAAAATCAAAGCAAAGCAAACATA 1106
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 CTGTTGCCTTTCTTTCTTTCACTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCACATG 999
consensus_9193#0 CAAATACTCACCAACCAGGAACGGCAACAGTAGTAGTAAGGGAAGAACATTCGAGGCGAC 1166
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 TGCT-------------------------------------------------------- 1003
consensus_9193#0 GAATACGATTTATGATCCTTTTTTTTCTAATACGATTAATTTCTAATACGATTGATTAAT 1226
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 ------------------------------------------------------------
consensus_9193#0 ACCTGTACACACTTCAAACAGATTCTACCGACCGGGCTATGTTAGCTAAGTTTGTGCCTT 1286
consensus_9193#4 ------------------------------------------------------------
consensus_9193#2 ------------------------------------------------------------
consensus_9193#3 ------------------------------------------------------------
consensus_9193#1 ------------------------------------------------------------
consensus_9193#0 ATTGTTTTTTTGATTCTTCATCTGTGTGACAGTTAA 1322
consensus_9193#4 ------------------------------------
consensus_9193#2 ------------------------------------
consensus_9193#3 ------------------------------------
consensus_9193#1 ------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||