These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9196#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1720 fasta sequence [AATGATGGTGGAAAGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTGTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCTCTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGTTGTTCATCGC-AGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA-TCGTCGTCATCTTCCTCCT-CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC-GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGAGGCCGATTTTTTTTTGGGCGAAATGTGTACCGGGGTGCCAAAGACGCTTACTTCAGCGCTGCGTGCGG] [-] EMBL BX626659 [AATGATGGTGGAAAGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTGTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCTCTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCA ] [-] EMBL BM581307 [ CTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAAC TTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCcgg ] [+] EMBL CNS08ZAM [ TTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGTTGTTCATCGC AGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTTATTTGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTGGCCTTA ] [+] EMBL CNS09K2O [ gggatgTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGTCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGTTGTTCATCGCGAGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACC ] [+] EMBL CNS09I7S [ ACGATGAGAACGCACCCGATAGTTATGTACACGAAATGTGTAAAATACACTACAGCTTCGTAACCTCGGGCCTTACTGTCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAA ] [-] EMBL BM600668 [ AGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTcgg ] [-] EMBL CNS09K2N [ CTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGT CCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTACGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTC ] [-] EMBL BM655402 [ GATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACcgg ] [-] EMBL BM585266 [ CTTGCCGCCTTGCCTTTCCCACTGCCCTTGGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGTGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTCTACAATAGTAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGGGTGAAAAACcgg ] [-] EMBL CNS08ZAL [ GCACTCTTACGTTCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTACGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAAAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGCGGGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTC ] [-] EMBL BM601781 [ TACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATTCGTCGTCATCTTCCTCCTCCCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTACGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGAGGCCGATTTTTTTTTGGGCGAAATGTGTACCGGGGTGCCAAAGACGCTTACTTCAGCGCTGCGTGCGG] consensusID : consensus_9196#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence [CCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATCGGACGCGTGGGCGG] [-] EMBL BM587857 [CCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATCGGACGCGTGGGCGG] consensusID : consensus_9196#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 682 fasta sequence [TTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCAT-GATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGCCCACGCGTCCGCGG] [-] EMBL BM607507 [TTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCAT GATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGCCCACGCGTCCGCGG] [-] EMBL CNS09I7R [ TTTTTGTTACCCTTGCCGTTACCTGCATGGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCC ] consensusID : consensus_9196#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence [AAGATGATACGCTTACAAAATTAGTTTATTGCATGTGTATTTTGTATTACACTTTCGTAGGGGAATTCGCAATGATGGTTGAAATGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTTTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCACTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTGTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGCGGACGCGTGGGCGG] [-] EMBL BM601092 [AAGATGATACGCTTACAAAATTAGTTTATTGCATGTGTATTTTGTATTACACTTTCGTAGGGGAATTCGCAATGATGGTTGAAATGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTTTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCACTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTGTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGCGGACGCGTGGGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 AATGATGGTGGAAAGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAAT 60 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 TAGTGTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAA 120 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 TGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCTCTATACAC 180 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 GAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTT 240 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 GATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATA 300 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 ACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCA 360 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 CCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTT 420 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 ACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGA 480 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 GCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTA 540 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 GCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGC 600 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 TTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGT 660 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 TGTTCATCGCAGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATG 720 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 ATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCC 780 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 GCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCA 840 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 ------------------------------------------------------------ consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 CCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCA 900 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 -------------------------------------------------------CCTTT 5 consensus_9196#2 ------------------------------------------------------------ consensus_9196#0 GAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTT 960 consensus_9196#3 ------------------------------------------------------------ consensus_9196#1 GGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAG 65 consensus_9196#2 ------------------------TTATCATCATCGCCGGAATCGTCCTCACTGTTGGAG 36 consensus_9196#0 GGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAG 1020 consensus_9196#3 -----------------------------------------------------------A 1 consensus_9196#1 GCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTC 125 consensus_9196#2 GCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTC 96 consensus_9196#0 GCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTC 1080 consensus_9196#3 AGATGATACGCTTACAAAATTAG----TTTATTGCATGTGTATTTTGTATTACA-CTTTC 56 * * * * * * * ** * ** * ** * * ** consensus_9196#1 TTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCC 185 consensus_9196#2 TTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCC 156 consensus_9196#0 TTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCC 1140 consensus_9196#3 GTAGGGGAATTCGCAATGATGGTTGAAATGAAAAAGCAAGCAAAGCAGGTTTTGTCAATG 116 ** * **** * **** * ** * * * ** consensus_9196#1 TCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTG 245 consensus_9196#2 TCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTG 216 consensus_9196#0 TCCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTG 1200 consensus_9196#3 CGCTT-TGCATTTAATTAGTTTT----TCGCTG--AAAATTGATTATTTTCTACATACTC 169 ** * * ** * * ** ** *** * *** * **** * * * * consensus_9196#1 TTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCG 305 consensus_9196#2 TTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCG 276 consensus_9196#0 TTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCG 1260 consensus_9196#3 TTGGGATTGCCAC--GCGATATAATGTTAATTGTTC----CATGTTCTACTGCTATATCA 223 ** ***** * ** ** * * * * * * *** * ** ** consensus_9196#1 GAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTG 365 consensus_9196#2 GAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTG 336 consensus_9196#0 GAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTG 1320 consensus_9196#3 GAAGTTGGATGTGTAGTT-CACTATACACGAAAAGAATGTAC-----TGTAATACTATTT 277 ** * * **** * ** * * ** * ** * * * * * *** consensus_9196#1 GAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCC 425 consensus_9196#2 GAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCC 396 consensus_9196#0 GAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCC 1380 consensus_9196#3 AAAATTCTGTGCAATATAGGCTTATTTAATAGTTGA-------TTTTGTATGAAGACAAT 330 *** * * * * *** * * ** ** * ** ** * consensus_9196#1 TCCAGGTTGGCATCCTTAAGAATTTTTTGAAT--TTCAGCCTTAAGCTCAGCTTTCGTCG 483 consensus_9196#2 TCCAGGTTGGCATCCTTAAGAATTTTTTGAAT--TTCAGCCTTAAGCTCAGCTTTCGTCG 454 consensus_9196#0 TCCAAGTTTGCATCCTTTAGAATTTTTTGAAT--TTCAGCCTTAAGCTCAGCTTTCGTCG 1438 consensus_9196#3 GTAAAATAGAGAACTTTTTTTGTTGCTTAAATCATATAACCGTATATCC-GCTGTCGTAG 389 * * * * ** ** ** *** * * ** ** * *** **** * consensus_9196#1 GATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCG-G 542 consensus_9196#2 GATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCG-G 513 consensus_9196#0 GATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGCG-G 1497 consensus_9196#3 G--TTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACG 447 * **** * * * * * * * * ** * ** * **** * * consensus_9196#1 TTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACT-- 600 consensus_9196#2 TTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACT-- 571 consensus_9196#0 TTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACT-- 1555 consensus_9196#3 AAATGTGTAAAAAACACTACAGCTTCGTA-ACCTCGGGCCTTACTGCCCAAATGCACTAT 506 *** * ** * * * * * * *** * * ** ** *** consensus_9196#1 -GCAGGAGCTGCAAGAGTTTGTTGAGTGA--AAAACTCTAGCGAAATAATTCACGAA-CG 656 consensus_9196#2 -GCAGGAGCTGCAAGAGTTTGTTGAGTGA--AAAACTCTAGCGAAATAATTCACGAA-CG 627 consensus_9196#0 -GCAGAAGCTGCAAGAGTTTGTTGAGTGA--AAAACTCTAGCGAAATAATTCACGAA-CG 1611 consensus_9196#3 TGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCG 566 **** ** * *** *** *** * * * * *** * * ** ** consensus_9196#1 TGCTCGAAGATGCCGATCGG-ACGCG--TGGGCGG------------------------- 688 consensus_9196#2 TGCTCGAAGATGCCGATTTATGCACC--TCGATGCAAGCGAGCCCACGCGTCCGCGG--- 682 consensus_9196#0 TGCTCGAAGATGCCGATTTATGCACC--TCGATGCAAGCGAGAGGCCGATTTTTTTTTGG 1669 consensus_9196#3 TACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGCGGACGCGTGGGCGG------- 619 * ** * * * * * * consensus_9196#1 --------------------------------------------------- consensus_9196#2 --------------------------------------------------- consensus_9196#0 GCGAAATGTGTACCGGGGTGCCAAAGACGCTTACTTCAGCGCTGCGTGCGG 1720 consensus_9196#3 --------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||