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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9199#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1158 fasta sequence
[CCGCCCACGCGTCCGGAAAACTCCGATCGGTGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAGCGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT---GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGACTATGCGGAGGCGACTTCAA]
[+] EMBL BM585991 [CCGCCCACGCGTCCGGAAAACTCCGATCTGTGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAGCGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTATAGAAATAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTT ]
[+] EMBL BM584640 [ cCGGTGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAGCGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGT ]
[+] EMBL BM634981 [ ccgGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAACGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTTTGCAGAGACTGACCGTGGGCGGAGGGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTG TATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATT ]
[+] EMBL AGA283025 [ cggcacgaAGGCTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGT ]
[+] EMBL BM602793 [ ccg GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTATAGAAATAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAAACGGGGTGGATACGGCGATTCGAAa ]
[+] EMBL BM596573 [ ccgGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATT TAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAAATTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGTTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAA ]
[-] EMBL AGA281412 [ GTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGACTATGCGGAGGCGACTTCAA]
consensusID : consensus_9199#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 671 fasta sequence
[CCGGGTTTTCAGGCTTCGGCAGTCGTAGTACCGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACAAAGCATTGCTTGTCTTGCACATTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGTG---CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT---GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAAACTGTTTCGGTAAACG]
[+] EMBL BM631485 [CCGGGTTTTCAGGCTTCGGCAGTCGTAGTAGAGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTTTCAGGACAAAGCATTGCTTGTCTTGCACATTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGT ]
[+] EMBL BM579699 [ CCGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACTAAGCATTGCTTGTCTTGCACATTTGTTACAA GAGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTG TATGTATGCATGTGTGTGTGTGAC CCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGT ]
[+] EMBL BM611835 [ CCGCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACAAAGCATTGCTTGTCTTGCACACTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTATAGAAATAGCACAGCTTTAAAGGACAACGCTTGATT ]
[+] EMBL BM625438 [ CAGGACAAAGCATTGCTTGTCTTGCACATTTGTTACAAGCGTTTGCGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGTG CCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATTTCAAACAAGTGAGAACACACAGTATTTGGAAAGT GTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATTTAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGTTCGGTAAAAACTGTTTCGGTAAACG]
consensusID : consensus_9199#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence
[CCGCCCACGCGTCCGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGGACTATCGCGGAGGCGACTTCAACAGGCGTAGCGGGAGGCGGCGGTGGAGGCCGCTATCAGAACGATCGGCGCGGCGGCGACTACGGCAACTATGGGCCGCGGCGGTGGCGACCGGGGCTACCAACAATGGCGGTGGCTTCCAGCGCGGCGGGGGACGGCGGGGGCTATCAGAATTCTGAAGGT]
[+] EMBL BM576834 [CCGCCCACGCGTCCGGGCGTTCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGTGCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAATCGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGGACTATCGCGGAGGCGACTTCAACAGGCGTAGCGGGAGGCGGCGGTGGAGGCCGCTATCAGAACGATCGGCGCGGCGGCGACTACGGCAACTATGGGCCGCGGCGGTGGCGACCGGGGCTACCAACAATGGCGGTGGCTTCCAGCGCGGCGGGGGACGGCGGGGGCTATCAGAATTCTGAAGGT]
consensusID : consensus_9199#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence
[CCGGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAACGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGTGTATAGGAAACTAGGGCGTTCGGTACAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCT]
[+] EMBL BM610475 [CCGGGAAAAGAACGTCGGTAACGTCGTGTCCGTTTTGTATGAACGAAAACTTACGCTAAATTGTGCAAACCCTCAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTACAGCTTTAAAGGACAACGCTTGATTAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAAAATTGCAGTGAATTTGGTGGCGAGATATCAAACAGAACAGTACGTAATTACTCTTCCCAAGGTGTGCATCGCCGTAAGTGTGTGTGTGTATAGGAAACTAGGGCGTTCGGTACAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCT]
consensusID : consensus_9199#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence
[CCGCGGACGCGTGGGCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACTAAGCATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGGTATATTTAGTTAAAAAAAAATGTGTTACCAAAAGTTGTGAAATAGATAAGCGGTCGACAAGCTCTAGAACACAAAAGTCCCGTGAACTGCTGGAGGATGATGACCCCGTTTTCTCATGAATGGAGTGTGCAATACGTAGAAGAAGATTGTACATGACGCGCTCCTCTCCTCTGTTGCGTTAATTTCCCAAGCAGCAGCATTCAACATCCCACCCTCCCCGTCGAGTGACAAAGAGCGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGT]
[+] EMBL BM629327 [CCGCGGACGCGTGGGCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGTTTCTCAGGACTAAGCATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGGTATATTTAGTTAAAAAAAAATGTGTTACCAAAAGTTGTGAAATAGATAAGCGGTCGACAAGCTCTAGAACACAAAAGTCCCGTGAACTGCTGGAGGATGATGACCCCGTTTTCTCATGAATGGAGTGTGCAATACGTAGAAGAAGATTGTACATGACGCGCTCCTCTCCTCTGTTGCGTTAATTTCCCAAGCAGCAGCATTCAACATCCCACCCTCCCCGTCGAGTGACAAAGAGCGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATGTATGCATGTGTGTGTGTGACCCTGTCTGGTGGTACATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGT]
consensusID : consensus_9199#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 500 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGGTTTTCAGGACAAAGTATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATT]
[+] EMBL BM622216 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCCGCGTTTGACCGTTATTTTGCGGAGATTTTTGCCAGTTTTAGGAGAAGGTTTTCAGGACAAAGTATTGCTTGTCTTGCACATTTGTTACAAGAGTTTATTGGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTTTGTTCCCCCTTTCAACTGTGTGTGCGCGCGCGTGTATATGTATGCAAGTGTGTGTGCCTGTCTGGTGGTGCATTCGAAATCAAAGATACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTACCAGTGAGTGCGCACACTTCATCTCAAACAAGTGAGAACACACAGTATTTGGAAAGTGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCACAGCTTTAAAGGACAACGCTTGATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9199#1 ----------------CCGGGTTTTCAGGCTT-CGGCAGTCGTAGTACCGCGGTA-CGCC 42
consensus_9199#5 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTC-CGGTA-CGCC 58
consensus_9199#3 -----------------------------------CCGGGAAAAGAACGTCGGTAACGTC 25
consensus_9199#4 -------------------------------------------------------CCGCG 5
consensus_9199#0 -------CCGCCCACGCGTCCGGAAAACTCCGATCGGTGGAAAAGAACGTCGGTAACGTC 53
consensus_9199#2 ------------CCGCCCACGCGTCCGGGCGTTCGGTAAAACTGTTTCGGTAAAA-CGGT 47
**
consensus_9199#1 G-CGTTTGACCGTTATTTT--GCGGAGATTTTTGCCA-----GTTTTAGGAGAAGTTTCT 94
consensus_9199#5 G-CGTTTGACCGTTATTTT--GCGGAGATTTTTGCCA-----GTTTTAGGAGAAGGTTTT 110
consensus_9199#3 G-TGTCCGTTTTGTATGA---ACGAAAACTTACGCTA-----AATT---GTGCAAACCCT 73
consensus_9199#4 GACGCGTGGGCGTTATTTT--GCGGAGATTTTTGCCA-----GTTTTAGGAGAAGTTTCT 58
consensus_9199#0 G-TGTCCGTTTTGTATGA---GCGAAAACTTACGCTA-----AATT---GTGCAAACCCT 101
consensus_9199#2 ACCGCTTCACCCCCGCTAAAAAAGAACACTTTTCTCATCGTAACTTTCGTCCCAAATCCT 107
* * * * ** * ** * *
consensus_9199#1 ----CAGGACAAA-GCATTGCTTGT-CTTGCACATTTGTTA-CAAGCGTTTGCGTTTATT 147
consensus_9199#5 ----CAGGACAAA-GTATTGCTTGT-CTTGCACATTTGTTA-CAAGAGTTT------ATT 157
consensus_9199#3 ----CAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTG-GCTACGGTT-------TT 121
consensus_9199#4 ----CAGGACTAA-GCATTGCTTGT-CTTGCACATTTGTTA-CAAGAGTTT------ATT 105
consensus_9199#0 ----CAGCGGAAGTGTATTCTTCGTGCTCGCCAACGTTTTGGCTACGGTTTTGGTGTGTT 157
consensus_9199#2 ACGGTGGAAGGAAGACAACAAAACTATACGAACGCTCACTGTAATATGAGTAATGCTATT 167
* * * * * * * * **
consensus_9199#1 ---------------------GGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 186
consensus_9199#5 ---------------------GGAAAGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 196
consensus_9199#3 ---------------------G-----CGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 155
consensus_9199#4 ---------------------G-------GAAAGGTA------TATTTAGTTAAAAAAAA 131
consensus_9199#0 TGCAGAGACTGACCGTGGGCGGAAAGGCGGAAAGCTTTTCCCTTCCTTCGTCGGAGCAGA 217
consensus_9199#2 AACCA----------------AAATGGTACAGGTCTAGAACAGCAGTTTGCTGGTCTGGA 211
* * ** * *
consensus_9199#1 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 245
consensus_9199#5 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 255
consensus_9199#3 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 214
consensus_9199#4 ATGTGTTACCAA-AAGTTGTGAAATAGATAAGCG-GTCGACA-AGCTCTAGAACACAAAA 188
consensus_9199#0 ACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGCATCCGTT-TGTTCCCCCTTTCAACT 276
consensus_9199#2 CTTGCAGCAGAAGCAGCAGC-AACTTGGCGGCGGCGGTGGCAGCAACCCAGAATCCGGAA 270
** ** * * * * *
consensus_9199#1 GTGTGTGCGCGCGCGTGTATATGTAT--GCAAGTGTGTGTGTGCCTGTCTG-GTG-GTGC 301
consensus_9199#5 GTGTGTGCGCGCGCGTGTATATGTAT--GCAAGTGTGTGTG--CCTGTCTG-GTG-GTGC 309
consensus_9199#3 GTGTGTGCGCGCGCGTGTATGTATGC--ATGTGTGTGTGTGACCCTGTCTG-GTG-GTAC 270
consensus_9199#4 GTCC---CGTGAACTGCTGGAGGATG--ATGACCCCGTTTTCTCATGAATG-GAGTGTGC 242
consensus_9199#0 GTGTGTGCGCGCGCGTGTATATGTATGCATGTGTGTGTGTGACCCTGTCTG-GTG-GTGC 334
consensus_9199#2 ATCC-----TAAGCATCCGGCCGGGC-----GGTACGTACCACCGCAATTGCGAGAATGT 320
* * ** * ** * * *
consensus_9199#1 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 359
consensus_9199#5 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 367
consensus_9199#3 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 328
consensus_9199#4 AATACGTAGAAGAAGATTGTACATGACGCGCTCCTCTCCTCTGTTGCGTTAATTTCCCAA 302
consensus_9199#0 ATT-CGAAATCAAAGAT-ACCCGTGACACGACGCTTCGAGTGTATACGTGTGTTGTGTAC 392
consensus_9199#2 GCT--GATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAA 378
* * * ** * * *** * *
consensus_9199#1 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 415
consensus_9199#5 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 423
consensus_9199#3 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 384
consensus_9199#4 GCAGCAGCA-TTCA-ACATCCCACCCTCCCCGTCGAGTG-ACAAAGAGCGCGGAA--AGC 357
consensus_9199#0 CAGTGAGTG-CGCACACTTCATCTCAAACAAGTGAGAAC-ACACAGTATTTGGAA--AGT 448
consensus_9199#2 GCGGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGA 438
* * * * * * *** *
consensus_9199#1 GTCG---GGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCA-CAGC 471
consensus_9199#5 GTCG---GGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCA-CAGC 479
consensus_9199#3 GTCGTCGGGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGTA-CAGC 443
consensus_9199#4 TTTTCCCTTCCTTCGTCGGAGCAGAACATCTAAAGAAGAAGAAGCGGAAGCAGTAGCAGC 417
consensus_9199#0 GTCG---GGGCAGCGTGTTGTGCAAACGCTGTGTGCAGTGCTTAGAGAAAGAGCA-CAGC 504
consensus_9199#2 ATCG---TGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGGACTATCGCGGAGGCGAC 495
* * ** * * * * *
consensus_9199#1 TTTAAAGGACAACGCTTGATTAAAAAAAAAAACA-GTTTGTGAACATTTTTGAACTATAA 530
consensus_9199#5 TTTAAAGGACAACGCTTGATT--------------------------------------- 500
consensus_9199#3 TTTAAAGGACAACGCTTGATTAAAAAAAAAAACA-GTTTGTGAACATTTTTGAACTATAA 502
consensus_9199#4 ATCCGTTTGTTCCCCCT--TTCAACTGTGTGTGC-GCGCGCGTGTATGTATGCATGTGTG 474
consensus_9199#0 TTTAAAGGACAACGCTTGATTAAAAAAAAAAAACAGTTTGTGAACATTTTTGAACTATAA 564
consensus_9199#2 TTCAACAGGCGTAGCGGGAGGCGGCGGTGGAGGCCGCTATCAGAACGATCGGCGCGGCGG 555
* *
consensus_9199#1 AA-TTGCAGTGAATTTGG--TGGCGAGATATCAAACAGAACAGTACGTAATTACTCTT-C 586
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 AA-TTGCAGTGAATTTGG--TGGCGAGATATCAAACAGAACAGTACGTAATTACTCTT-C 558
consensus_9199#4 TG-TGTGACCCTGTCTGG--TGGTACATTCGAAATCAAAGATACCCGTGAC-ACGACG-C 529
consensus_9199#0 AA-TTGCAGTGAATTTGG--TGGCGAGATATCAAACAGAACAGTACGTAATTACTCTT-C 620
consensus_9199#2 CGACTACGGCAACTATGGGCCGCGGCGGTGGCGACCGGGGCTACCAACAATGGCGGTGGC 615
consensus_9199#1 CCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGT 646
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 CCAAGGTGTGCATCGCCGTAAGTGTGTGTG----------TGTATAGGAAACTAGGGCGT 608
consensus_9199#4 TTCGAGTGTATACGTGTGTT-GTGT----------------------------------- 553
consensus_9199#0 CCAAGGTGTGCATCGCCGTAAGTGTGTGTGCGCGTGACAGTGTATAGGAAACTAGGGCGT 680
consensus_9199#2 TTCCAGCGCG-GCGGGGGACGGCGGGGGCTATCAGAATTCTGAAGGT------------- 661
consensus_9199#1 TCGGTAAAAACTGTTTCGGTAAACG----------------------------------- 671
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 TCGGTACAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCT---------------- 652
consensus_9199#4 ------------------------------------------------------------
consensus_9199#0 TCGGTAAAACTGTTTCGGTAAAACGGTACCGCTTCACCCCCGCTAAAAAAGAACACTTTT 740
consensus_9199#2 ------------------------------------------------------------
consensus_9199#1 ------------------------------------------------------------
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 ------------------------------------------------------------
consensus_9199#4 ------------------------------------------------------------
consensus_9199#0 CTCATCGTAACTTTCGTCCCAAATCCTACGGTGGAAGGAAGACAACAAAACTATACGAAC 800
consensus_9199#2 ------------------------------------------------------------
consensus_9199#1 ------------------------------------------------------------
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 ------------------------------------------------------------
consensus_9199#4 ------------------------------------------------------------
consensus_9199#0 GCTCACTGTAATATGAGTAATGCTATTAACCAAAATGGTACAGGTCTAGAACAGCAGTTT 860
consensus_9199#2 ------------------------------------------------------------
consensus_9199#1 ------------------------------------------------------------
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 ------------------------------------------------------------
consensus_9199#4 ------------------------------------------------------------
consensus_9199#0 GCTGGTCTGGACTTGCAGCAGAAGCAGCAGCAACTTGGCGGCGGCGGTGGCAGCAACCCA 920
consensus_9199#2 ------------------------------------------------------------
consensus_9199#1 ------------------------------------------------------------
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 ------------------------------------------------------------
consensus_9199#4 ------------------------------------------------------------
consensus_9199#0 GAATCCGGAAATCCTAAGCATCCGGCCGGGCGGTACGTACCACCGCAATTGCGAGAATGT 980
consensus_9199#2 ------------------------------------------------------------
consensus_9199#1 ------------------------------------------------------------
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 ------------------------------------------------------------
consensus_9199#4 ------------------------------------------------------------
consensus_9199#0 GCTGATAGCGGTGGCGACTTTCAACCTGCTGATACCGGTGCCGGCGTTGGTCCTGTAAGC 1040
consensus_9199#2 ------------------------------------------------------------
consensus_9199#1 ------------------------------------------------------------
consensus_9199#5 ------------------------------------------------------------
consensus_9199#3 ------------------------------------------------------------
consensus_9199#4 ------------------------------------------------------------
consensus_9199#0 GGCGGCGGTATCGGTGGCGGAGGTGGCAGACGGGGTGGATACGGCGATTCGAACCGGAAT 1100
consensus_9199#2 ------------------------------------------------------------
consensus_9199#1 ----------------------------------------------------------
consensus_9199#5 ----------------------------------------------------------
consensus_9199#3 ----------------------------------------------------------
consensus_9199#4 ----------------------------------------------------------
consensus_9199#0 CGTGGCGGCGGCGACTTCGGGCGCTACGGCGATCGTGACTATGCGGAGGCGACTTCAA 1158
consensus_9199#2 ----------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||