These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9202#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1446 fasta sequence [TCCGCGCCCTGTCGGCGAACAAGATCGCCGAGATCGCCGTGGAAGACATGGAGCATCCGCAGCAGGCGGCCGAAGGGGCCACCCTGGGCCAACTACAAGTTCCAGGCGTTCAAGAGCAAGGAGAAACAAACGCCGCTGCCCGCGGTAAGCTTCGCGGAGGATGCCAGCGGGAAGGCCGATTGGGATCGGGGTGTGATCA-TGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACACCGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTGCCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGTTCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTGGATCCCTGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTGGCATCAGCCTGAAGCCGTCCGCCAACATGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC-GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCA] [+] EMBL AGA281707 [TCCGCGCCCTGTCGGCGAACAAGATCGCCGAGATCGCCGTGGAAGACATGGAGCATCCGCAGCAGGCGGCCGAAGGGGCCACCCTGGGCCAACTACAAGTTCCAGGCGTTCAAGAGCAAGGAGAAACAAACGCCGCTGCCCGCGGTAAGCTTCGCGGAGGATGCCAGCGGGAAGGCCGATTGGGATCGGGGTGTGATCA TGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACACCGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTGCCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGTTCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTGGATCCCTGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTGGCATCAGCCTGAAGCCGTCCGCCAACATGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGT ] [+] EMBL BX603176 [ GGTGTGATCATTGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACACCGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTGCCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGTTCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTGGATCCCAGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTGGCATCAGCCTGAAGCCGTCCGCCAACATGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGTGCCGCTGTGCGAAAACATGCCAA ] [+] EMBL BM577769 [ ccgGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTG ] [-] EMBL AGA282987 [ AGGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGA GGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCAKSCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCA] [+] EMBL BX612926 [ GGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTTTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCC ] [+] EMBL BX626637 [ TACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCNGNTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGAT ] consensusID : consensus_9202#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1052 fasta sequence [TCGGTAGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATCTGCGGTCCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCGGTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGAGCGAAGGAAAACGTGCGCA-TTGCGGCCGCGGCCGGTGTCCGCGCCCTGTCGGGCGTGTTTTCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA----GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATAAATAGTCAAT] [+] EMBL CNS09K09 [TCGGTAGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATCTGCGGTCCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCGGTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGAGCGAAGGAAAACGTGCGCA TTGCGGCCGCGGCCGGTGTCCGCGCCCTGTCGGGCGTGTTTTCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAA GGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTGTTTTTCTTCTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGCG ACTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTA ] [-] EMBL CNS09K0A [ TTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATCTAAAAACCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCGGTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGAGCGAAGGAAAACGTGCGCATTTGCGGCCGCGGCCGGTGTCCCCG CCTGTCGGGCGTGTTTTCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGAACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTGTTTTTCTTCTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATA ] [+] EMBL BM580958 [ CCGGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATA ] [+] EMBL BM581938 [ ccgCGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAA ] [-] EMBL AGA283282 [ GGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCAAGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAG ] [-] EMBL BM581172 [ CTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATAAATAGTCAAT] consensusID : consensus_9202#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 666 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCG-GTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTACAGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACA-CCAGTGTTGTGGATAGCATTTCCGGGGGACTAC-TTCTATGATCCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCTTTACCCGCATTCGGTTTTGT] [+] EMBL BM579468 [CCGCCCACGCGTCCGCCCACGCGTCCG GTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTACAGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACA CCAGTGTTGTGGATAGCATTTCCGGGGGACTAC TTCTATGATCCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCTTTACCCGCATTCGGTTTTGT] [+] EMBL BM613364 [ ccgtattgGCGGACGCGTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTACAGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTTCTATGATCCGTATGC ] consensusID : consensus_9202#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence [CCGCAATTCGGTACGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAGGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATATCCACTGTTATGTTCTAAGCCCCAACCTGGTACACACTTTTGCAAACGATAGCAAAGCAAAGCGAATAAGCACAGTGCGCGAGAAAAATGCAAACATTCATATTAGAGAACTCGACTTTCTCTAAAGCACACCCATACGATATAGTGAAAGTGTATAGGAAAAGATAACAGACAGTTCAACTGTACGACGGATATACACGTCGCGCGTAACGCAGTTTGTTCATTCGAAGATGATGTTGTTGATTTGTAAAAAAAACACACACTGCACAGCTTAATCGTCTTAATAAGTTCAGTTTTTGAAATGTTTTAAAGTTTATTGGTGTGATTCGGGTTTGAGTTACGTACGATATGCTTTTACTGTGACTTCCGGCTAGAAACAATCGTTTCTGTTAAGCGCTATCTGTAGACGAGTTGTGTTTGAGTGCTCTAATCTATCCAATCGATTAACTCTA] [+] EMBL BM632474 [CCGCAATTCGGTACGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAGGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATATCCACTGTTATGTTCTAAGCCCCAACCTGGTACACACTTTTGCAAACGATAGCAAAGCAAAGCGAATAAGCACAGTGCGCGAGAAAAATGCAAACATTCATATTAGAGAACTCGACTTTCTCTAAAGCACACCCATACGATATAGTGAAAGTGTATAGGAAAAGATAACAGACAGTTCAACTGTACGACGGATATACACGTCGCGCGTAACGCAGTTTGTTCATTCGAAGATGATGTTGTTGATTTGTAAAAAAAACACACACTGCACAGCTTAATCGTCTTAATAAGTTCAGTTTTTGAAATGTTTTAAAGTTTATTGGTGTGATTCGGGTTTGAGTTACGTACGATATGCTTTTACTGTGACTTCCGGCTAGAAACAATCGTTTCTGTTAAGCGCTATCTGTAGACGAGTTGTGTTTGAGTGCTCTAATCTATCCAATCGATTAACTCTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9202#0 TCCGCGCCCTGTCGGCGAACAAGATCGCCGAGATCGCCGTGGAAGACATGGAGCATCCGC 60 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 AGCAGGCGGCCGAAGGGGCCACCCTGGGCCAACTACAAGTTCCAGGCGTTCAAGAGCAAG 120 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 GAGAAACAAACGCCGCTGCCCGCGGTAAGCTTCGCGGAGGATGCCAGCGGGAAGGCCGAT 180 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 TGGGATCGGGGTGTGATCATGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACAC 240 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 CGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTG 300 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 CCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGT 360 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 TCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTG 420 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 GATCCCTGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTG 480 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ------------------------------------------------------------ consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 GCATCAGCCTGAAGCCGTCCGCCAACA-TGGACCAGATGCGTGCCGACATGGGTGGTGCA 539 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ---------------------TCGGTA-GGTCGTGGAGTCGCAGCTACGCTTCAATGTCG 38 consensus_9202#3 --------------CCGCAATTCGGTACGGTCGTGGAGTCGCAGCTACGCTTCAATGTCG 46 consensus_9202#0 GCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAA 599 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 AAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACG 98 consensus_9202#3 AAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAGGGATGAGGTGAAGTTTACG 106 consensus_9202#0 GGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTG 659 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 CCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATC 158 consensus_9202#3 CCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATA 166 consensus_9202#0 GTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTT 719 consensus_9202#2 -------------------------------------------CCGCCCACG--CGTCC- 14 consensus_9202#1 TGCGGTCCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCG 218 consensus_9202#3 TCCACTGTTAT------------------------------GTTC--TAAGCCCCAACC- 193 * * * consensus_9202#0 ATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATT 779 consensus_9202#2 GCCCACGCGTCCG-GTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATT 73 consensus_9202#1 GTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGA 278 consensus_9202#3 ----TGGTACACACTTTTGCAAACGATAGCAAAGCAAAGCGAATAAGCACAGTGCGCGAG 249 * * ** * * * * * * consensus_9202#0 GCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCG---TGTCGGGCGTGTTT 836 consensus_9202#2 GCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCG---TGTCGGGCGTGTTT 130 consensus_9202#1 GCGAAGGAAAACGTGCGCATTGCGGCCGCGGCCGGTGTCCGCGCCCTGTCGGGCGTGTTT 338 consensus_9202#3 AAAAATGCAAACATTCATATTAGAGA---ACTCGACTTTCTCTAAAGCACACCCATACGA 306 * * * ** * * * * * * consensus_9202#0 TCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGG 896 consensus_9202#2 TCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGG 190 consensus_9202#1 TCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGG 398 consensus_9202#3 TATAGTGAAAGTGTATAGGAAAAGATAACAGAC-AGTTCAACTGTACGACGGATA--TAC 363 * ** * * * * *** * ** ** ** *** * * consensus_9202#0 GTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACC---ACAACGGT 953 consensus_9202#2 GTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACC---ACAACGGT 247 consensus_9202#1 GTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACC---ACAACGGT 455 consensus_9202#3 ACGTCGCGCGTAACGCAGTTTGTTCATT-CGAAGATGATGTTGTTGATTTGTAAAAAAAA 422 ** **** * * * *** ** * * ** * * ** * ** consensus_9202#0 TACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTC 1013 consensus_9202#2 TACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTC 307 consensus_9202#1 TACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTC 515 consensus_9202#3 CACACACTGCACAGCTTAATCGTCT-TAATAAGTTCAGTTTTTGAAATGTTTTAAAGTTT 481 ** *** *** * * * ** * * * ** * ** ** consensus_9202#0 TT--GCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGA 1071 consensus_9202#2 TT--GCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGA 365 consensus_9202#1 TT--GCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGA 573 consensus_9202#3 ATTGGTGTGATTCGGGTTTGAGTTACGTACGATATGCTTTTACTGTGACTTCCGGCTAGA 541 * * * ** * * ** ** * * * ***** ** consensus_9202#0 TGGGCGATTGTAGCGATCAAA-GCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATG 1130 consensus_9202#2 TGGGCGATTGTAGCGATCAAA-GCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATG 424 consensus_9202#1 TGGGCGATTGTAGCGATCAAA-GCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATG 632 consensus_9202#3 --AACAATCGTTTCTGTTAAGCGCTATCTGTAGACGAGTTGTGT-TTGAGTGCTCTAATC 598 * ** ** * * ** **** * *** * * * * * * ** consensus_9202#0 CGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAAC 1190 consensus_9202#2 CGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTAC 484 consensus_9202#1 CGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAAC 692 consensus_9202#3 TATCCAATCGATTAACTCTA---------------------------------------- 618 * * *** * ** consensus_9202#0 AGTTTGTTTGTTTGTTT----TTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTT 1246 consensus_9202#2 AGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTT 544 consensus_9202#1 AGTTTGTTTGTTTGTTT----TTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTT 748 consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 TACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAA 1306 consensus_9202#2 TACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATGAT 604 consensus_9202#1 TACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAA 808 consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 CCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTT 1366 consensus_9202#2 CCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCTTTACCCGCATTCGGTTTT 664 consensus_9202#1 CCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTT 868 consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 GTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATC 1426 consensus_9202#2 GT---------------------------------------------------------- 666 consensus_9202#1 GTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATC 928 consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 GATCAAGCGAAGTATTTTCA---------------------------------------- 1446 consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 GATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTAC 988 consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 ------------------------------------------------------------ consensus_9202#2 ------------------------------------------------------------ consensus_9202#1 ATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATAAATAGT 1048 consensus_9202#3 ------------------------------------------------------------ consensus_9202#0 ---- consensus_9202#2 ---- consensus_9202#1 CAAT 1052 consensus_9202#3 ---- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||