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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9209#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1266 fasta sequence
[CCGCGAAAACCGAACCTTCATACTGGCGAAGGATGCGGAGATAGAGCTCAACTTCTTCATCCGCTACAACCAGATGGGACCGATCCCGGACGTGGTGGAGGTGAATTTCAACGGTCACAATCACTGCCAACAACGAAGACGCCGTGTGTTGAACGAACCTGCCAGGGAGGAAGAACATCGGAGAACCACAGGCAGGACTATGTCCACTACGGAACGTGCTACGGCGTGGGTAAAGTTGGATCACACAACGGAAAGGACGGTAAGATCGGATAATTGCCTAATGTGAGCTGTTAATGAAGAGGTGTTTCTTTAGCATGAAAATACCGGATGGTCATTGGAGCAGGATGAGTGTGCAACAGTGTTGGAACCGGTCGGGACCCGTATACGATCGCGAATCATTGGTGGAGTTACGTCCAACCAGGGCGAACATCCGTGGCATGTGGCTATCTATCTGGATGAGGAGTATCAATGCGGTGGCAGTATCATCGGACGACGCTGGATCCTAACGGCGGCCCACTGTTTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGGGCATCATAGATATCAGTACGATCGATGATCACTTTTATCGTACCGCCGATGAGGTTATTGTTCATCGGGACTACAATCCGGTGATGTACACGACGGATATAGGGCTGCTACGGCTCAAGCGTAACATCACCTACAACAGCTTTATAAAGCCCGTCTGTCTCTACAATCGTACGGTGGACATTAGCACGTTCTATGGCCGCGAGGGAAAGGTTACCGGCTGGGGATTCAATCGGGACGGCGTGATCAGCAACGTGCTGAACTATCTAGAGGTGCCGGTCGTGTCGCAAAAGATGTGCTCCCAGCGGAATGTACAGTTTAATGGAGTGCTGGCGGTAGGCGAATCTTTCTGTGCCGGACATGCTGATGGCAACTCCGTGTGCAATGGGGACAGTGGTGGCGGATTAGTGTTTGCCGAAGGCCCACGGTACTACGTCCGCGGCATCGTGTCGATCAGTGCCCAGCGTCGGAACTTACTGCTCTGCGACCCGAACCAATACTCCGTCTTTACCGATGTTTCCAAATTCCTCAACTGGATACGGCAGCAAGTATCGTAGACAGGCGGGCCGGCGCGTTGCTCTTTTATGGAGAGAAAATATTTATTTCAATCGACACAGCAAAAATAGAACAGAACNACGATTAATAAAAATGCTTCTGCGCACAAAAAAATCCAACNNAAAGACAGCATGTG]
[+] EMBL BM639511 [CCGCGAAAACCGAACCTTCATACTGGCGAAGGATGCGGAGATAGAGCTCAACTTCTTCATCCGCTACAACCAGATGGGACCGATCCCGGACGTGGTGGAGGTGAATTTCAACGGTCACAATCACTGCCAACAACGAAGACGCCGTGTGTTGAACGAACCTGCCAGGGAGGAAGAACATCGGAGAACCACAGGCAGGACTATGTCCACTACGGAACGTGCTACGGCGTGGGTAAAGTTGGATCACACAACGGAAAGGACGGTAAGATCGGATAATTGCCTAATGTGAGCTGTTAATGAAGAGGTGTTTCTTTAGCATGAAAATACCGGATGGTCATTGGAGCAGGATGAGTGTGCAACAGTGTTGGAACCGGTCGGGACCCGTATACGATCGCGAATCATTGGTGGAGTTACGTCCAACCAGGGCGAACATCCGTGGCATGTGGCTATCTATCTGGATGAGGAGTATCAATGCGGTGGCAGTATCATCGGACGACGCTGGATCCTAACGGCGGCCCACTGTTTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGGGCATCATAGATATCAGTACGATCGATGATCACTTTTATCGTACCGCCGATGAGGTTATTGTTCATCGGGACTACAATCCGGTGATGTACACGACGGATATAGGGCTGCTACGGC ]
[+] EMBL BX627909 [ TACACGGGCATCATAGATATCAGTACGATCGATGATCACTTTTATCGTACCGCCGATGAGGTTATTGTTCATCGGGACTACAATCCGGTGATGTACACGACGGATATAGGGCTGCTACGGCTCAAGCGTAACATCACCTACAACAGCTTTATAAAGCCCGTCTGTCTCTACAATCGTACGGTGGACATTAGCACGTTCTATGGCCGCGAGGGAAAGGTTACCGGCTGGGGATTCAATCGGGACGGCGTGATCAGCAACGTGCTGAACTATCTAGAGGTGCCGGTCGTGTCGCAAAAGATGTGCTCCCAGCGGAATGTACAGTTTAATGGAGTGCTGGCGGTAGGCGAATCTTTCTGTGCCGGACATGCTGATGGCAACTCCGTGTGCAATGGGGACAGTGGTGGCGGATTAGTGTTTGCCGAAGGCCCACGGTACTACGTCCGCGGCATCGTGTCGATCAGTGCCCAGCGTCGGAACTTACTGCTCTGCGACCCGAACCAATACTCCGTCTTTACCGATGTTTCCAAATTCCTCAACTGGATACGGCAGCAAGTATCGTAGACAGGCGGGCCGGCGCGTTGCTCTTTTATGGAGAGAAAATATTTATTTCAATCGACACAGCAAAAATAGAACAGAACNACGATTAATAAAAATGCTTCTG ]
[-] EMBL BX466681 [ GAATCTTTCTGTGCCGGACATGCTGATGGCAACTCCGTGTGCAATGGGGACAGTGGTGGCGGATTAGTGTTTGCCGAAGGCCCACGGTACTACGTCCGCGGCATCGTGTCGATCAGTGCCCAGCGTCGGAACTTACTGCTCTGCGACCCGAACCAATACTCCGTCTTTACCGATGTTTCCAAATTCCTCAACTGGATACGGCAGCAAGTATCGTAGACAGGCGGGCCGGCGCGTTGCTCTTTTATGGAGAGAAAATATTTATTTCAATCGACACAGCAAAAATAGAACAGAACAACGATTAATAAAAATGCTTCTGCGCACAAAAAAATCCAACNNAAAGACAGCATGTG]
consensusID : consensus_9209#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 737 fasta sequence
[GGCAGAATCGGCACGTGGTCACTTCTTCATCCGCTACAACCAGATGGGACCGATCCCGGACGTGGTGGAGGTGAATTTCAACGGTCACAATCACTGCCAACAACGAAGACGCCGTGTGTTGAACGAACCTGCCAGGGAGGAAGAACATCGGAGAACCACAGGCAGGACTATCTCCACTACGGAACGTGCTACGGCGTGGGTAAAGTTGGATCACACAACGGAAAGGACGCATGAAAATACCGGATGGTCATTGGAGCAGGATGAGTGTGCAACAGTGTTGGAACCGGTCGGGACCCGTATACGATCGCGAATCATTGGTGGAGTTACGTCCAACCAGGGCGAACATCCGTGGCATGTGGCTATCTATCTGGATGAGGAGTATCAA-TGCGGTGGCAGTATCATCGGACGACGCTGGATCCTAACGGCGGCCCACT-GTNTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGGGCATCATAGATATCAGTACGATCGATGATCACTTTTACCGTACCGCCGATGAGGTCATTGTTCATCGGGACTACAATCCGGTGATGTACACGACGGATATAGGGCTGCTACGGCTCAAGCGTAACATCACCTACAACAGCTTTATAAAGCCCGTCTGTCTCTACAATCGTACGGTGGACATTAGCACGTTCTATGGCCGCGAGGGAAAGGTTACCGGCTGGGGATTCAATCGGGACGGCGTGA]
[+] EMBL BX469791 [GGCAGAATCGGCACGTGGTCACTTCTTCATCCGCTACAACCAGATGGGACCGATCCCGGACGTGGTGGAGGTGAATTTCAACGGTCACAATCACTGCCAACAACGAAGACGCCGTGTGTTGAACGAACCTGCCAGGGAGGAAGAACATCGGAGAACCACAGGCAGGACTATCTCCACTACGGAACGTGCTACGGCGTGGGTAAAGTTGGATCACACAACGGAAAGGACGCATGAAAATACCGGATGGTCATTGGAGCAGGATGAGTGTGCAACAGTGTTGGAACCGGTCGGGACCCGTATACGATCGCGAATCATTGGTGGAGTTACGTCCAACCAGGGCGAACATCCGTGGCATGTGGCTATCTATCTGGATGAGGAGTATCAAGTGCGGTGGCAGTATCATCGGACGACGCTGGATCCTAACGGCGGGCCACTGGTNTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTACC ]
[+] EMBL BX602422 [ TTCTTCATCCGCTACAACCAGATGGGACCGATCCCGGACGTGGTGGAGGTGAATTTCAACGGTCACAATCACTGCCAACAACGAAGACGCCGTGTGTTGAATGAACCTGCCAGGGAGCAAGAACATCGGAGAACCACAGGCAGGACTACCTCCACTACGGAACGTGTTACGGCGTGGGTAAAGTTGGATCACACAACGGAAAGGACGCATGAAAATACCGGATGGTCATTGGAGCAGGATGAGTGTGCAACAGTGCTGGAACCGGTCGGGACCCGTATACGATCGCGAATCATTGGTGGAGTTACGTCCAACCAGGGCGAACATCCGTGGCATGTGGCTATCTATCTGGATGAGGAGTATCAA TGCGGTGGCAGTATCATCGGAAGACGCTGGATCCTAACGGCGGCCCACT GTCTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGGGCATCATAGATATCAGTACGATCGATGATCACTTTTACCGTACCGCCGATGAGGTCATTGTTCATCGGGACTACAATCCGGTGATGTACACGACGGATATAGGGCTGCTACGGCTCAAGCGTAACATCACCTACAACAGCTTTATAAAGCCCGTCTGTCTCTACAATCGTACGGTGGA ]
[+] EMBL BX602933 [ CAACGGTCACAATCACTGCCAACAACGAAGACGCCGTGTGTTGAACGAACCTGCCAGGGAGGAAGAACATCGGAGAACCACAGGCAGGACTATCTCCACTACGGAACGTGCTACGGCGTGGGTAAAGTTGGATCACACAACGGAAAGGACGCATGAAAATACCGGATGGTCATTGGAGCAGGATGAGTGTGCAACAGTGTTGGAACCGGTCGGGACCCGTATACGATCGCGAATCATTGGTGGAGTTACGTCCAACCAGGGCGAACATCCGTGGCATGTGGCTATCTATCTGGATGAGGAGTATTAA TGCGGTGGCAGTATCATCGGACGACGCTGGATCCTAACGGCGGCCCACT GTTTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGGGCATCATAGATATCAGTACGATCGATGATCACTTTTATCGTACCGCCGATGAGGTTATTGTTCATCGGGACTACAATCCGGTGATGTACACGACGGATATAGGGCTGCTACGGCTCAAGCGTAACATCACCTACAACAGCTTTATAAAGCCCGTCTGTCTCTACAATCGTACGGTGGACATTAGCACGTTCTATGGCCGCGAGGGAAAGGTTACCGGCTGGGGATTCAATCGGGACGGCGTGA]
consensusID : consensus_9209#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 637 fasta sequence
[GATCCCCCGAGGCGTCGTGTG-CAGTTTCGGAAGAAACCTGTGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGACCTTTTCCAACGATGGCAGCCTCTAAGGTTACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACAGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGATCGCGTCGGATGCCGTTGCTAGTGACCCGCGATAGTTTCCGTTTCAGTGTCGCCTGCTGCTTCGACAGGAATGGGTTCCGTTTCGTCCGTACTGCTGCTACCAACGCAATGTGATACGGCACAAC-TAAAACATCC-GCG-A-------GTCCGCTTTGTGCGCAGAAGCATTTTTATTAATCGTTGTTCTGTTCTATTTTTGCTGTGTCGATTGAAATAAATATTTTCTCTCCAT]
[+] EMBL AL694325 [GATCCCCCGAGGTGTCGTGTG CAGTTTCGGAAGGAACTTGTGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCAGCGAAAGGCATCCTGAGCTAGCCTTTATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGAACTTGTCCAACGATGGCAGCCTCTAAGGTAACATTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAA CCGCAGCAGACGGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGATCGGGTCGGATGCCGTTGCTAGTGACCCGCGATAGTTTCCGTTTCAGTGTCCACTGCTACTTCGATAGGAATGGGTTCCGTTTCATCCGTACTGCTGCTACCAACGCAATGTGATACGCAACAACGCAAAACATCCAGCGta ]
[+] EMBL BM604694 [ CCGCGGACGCGT GGGTGCCAGTTTCGGAAGAAACCTGAGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGACCTTTTCCAACGATGGCAGCCTCTAAGGTTACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACAGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGATCGCGTCGGATGCCGTTGCTAGTGACCCGCGATAGTTTCCGTTTCAGTGTCGCCTGCTGCTTCGACAGGAATGGGTTCCGTTTCGTCCGTACTGCTGCTACCAACGCAATGTGATACGGCACAAC TAAAACATCC GCG A GTCCGCTTTGTGCGCAGAAGCATTTTTATTAATCGTTGTTCTGTTCTATTTTTGCTGTGTCGATTGA ]
[+] EMBL BM581514 [ CCGTGG GTCGTGTGCCAGTTTCGGAAGAAACCTGTGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGACCTTTTCCAACGATGGCAGCCTCTAAGGTTACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACAGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGATCGCGTCGGATGCCGTTGCTAGTGACCCG ]
[+] EMBL BM645586 [ ccggc CAGTTTCGGAAGAAACCTGTGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGACCTTTTCCAACGATGGCAGCCTCTAAGGTTACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACAGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGATCGCGTCGGATGCCGTTGCTAGTGACCCGCGATAGTTTCCGTTTCAGTGTCGCCTGCTGCTTCGACAGGAATGGGTTCCGTTTCGTCCGTACTGCTGCTACCAACGCAATGTGATACGGCACAAC TAAAACATCC GCG A GTCCGCTTTGTGCGCAGAAGCATTTTTATTAATCGTTGTTCTGTTCTATTTTTGCTGTGTCGATTGAAATAAATATTTTCTCTCCAT]
[+] EMBL BM628525 [ ccggc CAGTTTCGGAAGAAACCTGTGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGACCTTTTCCAACGATGGCAGCCTCTAAGGTTACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACAGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGATCGCGTCGGATGCCGTTGCTAGTGACCCGCGATAGTTTCCGTTTCAGTGTCGCCTGCTGCTTCGACAGGAATGGGTTCCGTTTCGTCCGTACTGCTGCTACCAACGCAATGTGATACGGCACAAC TAAAACATCC GCG A GTCCGCTTTGTGCGCAGAAGCATTTTTATTAATCGTTGTTCTGTTCTATTTTTGCTGTGTCGATTGAAATAAATATTTTCTCTCCAT]
[+] EMBL BM656515 [ ccgggAACTTGTGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCAGCGAAAGGCATCCTGAGCTAGCCTTTATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGAACTTGTCCAACGATGGCAGCCTCTAAGGTAACATTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACGGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGATCGGGTCGGATGCCGTTGCTAGTGACCCGCGATAGTTTCCGTTTCAGTGTCCACTGCTACTTCGATAGGAATGGGTTCCGTTTCATCCGTACTGCTGCTACCAACGCAATGTGATACGCAACAACGCAAAACATCCAGCGTACCGCGGTGTCCGCTTTGTGCGCAGAAGCATTTTTATTAATCGTTGTTCTGTTCTATTTTTGCTGTGTCGATTGAA ]
consensusID : consensus_9209#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 548 fasta sequence
[CCACGAATCCCCCCGAGGTTAAGATAGAGCTCAACTTCTTCATCCCGCTACACCAGATTGGACCGATCCCGCGACGTNGTGGAGNGTGAATTTCAACGGTCACCATCACTGGCAAACAACGAAACGCCGCTGTGTTGAATGAACCTGGCAAGGAGCAAGAAACATCGGGAGAAACACAGTGGCGAGTGACTATCTCCACTACGGAACGTGTTACGGCGGCTTGGGTAAAAGTATGGAATCACCACAACCGGAAAGTGACGCAGTTAACAAATACCGGATGGTCACTNAGGANGCACGCGCACTGCACGTGGTNCACACACGTGCTGGGAACCCGGGTCGGGACCCGTATAACGATCGCGAATCATTTGGTGGAGTTACGTCCAACAGGGGCGAACATTCCGTGGCATTGTGGGTATCTATCTGGATGAGGAGTATCAATGCCGGTGGGCAGTATCATCGGAAGACGCTGGATCCTAACGGCGGCCACTGTCTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGG]
[+] EMBL AL933641 [CCACGAATCCCCCCGAGGTTAAGATAGAGCTCAACTTCTTCATCCCGCTACACCAGATTGGACCGATCCCGCGACGTNGTGGAGNGTGAATTTCAACGGTCACCATCACTGGCAAACAACGAAACGCCGCTGTGTTGAATGAACCTGGCAAGGAGCAAGAAACATCGGGAGAAACACAGTGGCGAGTGACTATCTCCACTACGGAACGTGTTACGGCGGCTTGGGTAAAAGTATGGAATCACCACAACCGGAAAGTGACGCAGTTAACAAATACCGGATGGTCACTNAGGANGCACGCGCACTGCACGTGGTNCACACACGTGCTGGGAACCCGGGTCGGGACCCGTATAACGATCGCGAATCATTTGGTGGAGTTACGTCCAACAGGGGCGAACATTCCGTGGCATTGTGGGTATCTATCTGGATGAGGAGTATCAATGCCGGTGGGCAGTATCATCGGAAGACGCTGGATCCTAACGGCGGCCACTGTCTGACGCGCCAAAACACGAACGAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGG]
consensusID : consensus_9209#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence
[CCGCCCACGCGTCCGGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGACCTTTTCCAACGATGGCAGCCTCTAAGGTTACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACAGCTGGCACCGTGTTCCTCAAGCACGGT]
[+] EMBL BM642180 [CCGCCCACGCGTCCGGGAAAAGGAAATTCAGGGAAAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTAGCTAGACGTAGATTATAGACAACTCACTCAGAGACCTTTTCCAACGATGGCAGCCTCTAAGGTTACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAAGGTGCTAAGCGTTCCGGAAGCGACACCCTTCACGGCGGTTCTAAAATTCGCGGCGGAAGAGTTCAAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAGCAGACAGCTGGCACCGTGTTCCTCAAGCACGGT]
consensusID : consensus_9209#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 278 fasta sequence
[GATCGAAAACCGAACCTTCATACTGGCGAANGATGCGGAGATAGAGCTCNACTTCTTCATCCGCTACAACCAGATGGGACCGATCCCGGACGTGGTGGAGGTGAATTTCAACGGTCACAATCACTGCCAACAACNAAGACGCCGTGTGTTGAATGAACCTGCCAGGGAGGAAGAACACCGGAGAACCACAGGCAGGACCATCTCCACTACNGAACGTGCTACGGNGTGGGTAAAGTTGGATCACNCAACGGAAAGGACGCATGAAAATAACNGATGGT]
[+] EMBL BX626151 [GATCGAAAACCGAACCTTCATACTGGCGAANGATGCGGAGATAGAGCTCNACTTCTTCATCCGCTACAACCAGATGGGACCGATCCCGGACGTGGTGGAGGTGAATTTCAACGGTCACAATCACTGCCAACAACNAAGACGCCGTGTGTTGAATGAACCTGCCAGGGAGGAAGAACACCGGAGAACCACAGGCAGGACCATCTCCACTACNGAACGTGCTACGGNGTGGGTAAAGTTGGATCACNCAACGGAAAGGACGCATGAAAATAACNGATGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9209#0 ------------CCGCGAAAACCGAACCTTCATACTGGCGAAGGATGCGGAGATAGAGCT 48
consensus_9209#1 --------------------------------------GGCAGAATCGGCACGTGG---- 18
consensus_9209#3 -----------------------------CCACGAATCCCCCCGAGGTTAAGATAGAGCT 31
consensus_9209#5 ------------GATCGAAAACCGAACCTTCATACTGGCGAANGATGCGGAGATAGAGCT 48
consensus_9209#2 GATCCCCCGAGGCGTCGTGTGCAGTTTCGGAAGAAACCTGTGGAAAAGGAAATTCAGGGA 60
consensus_9209#4 --------------------------CCGCCCACGCGTCCGGGAAAAGGAAATTCAGGGA 34
* * *
consensus_9209#0 CAACTTCTTCATCC-GC--TACAACCAGATGGGACCGATCCCG-GACGTGGTGGAGG-TG 103
consensus_9209#1 TCACTTCTTCATCC-GC--TACAACCAGATGGGACCGATCCCG-GACGTGGTGGAGG-TG 73
consensus_9209#3 CAACTTCTTCATCCCGC--TACA-CCAGATTGGACCGATCCCGCGACGTNGTGGAGNGTG 88
consensus_9209#5 CNACTTCTTCATCC-GC--TACAACCAGATGGGACCGATCCCG-GACGTGGTGGAGG-TG 103
consensus_9209#2 AAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTA 120
consensus_9209#4 AAGCTGCTACATTTTGCGATACATTCCCCCGCGAAAGACATCCTGAGCTAGCCTATATTA 94
** ** *** ** **** * ** ** * ** * * * *
consensus_9209#0 AATTTCAACGGTCACAATCACTGCCAA-CAACGAAGACGCCG-TGTGTTGAACGAACCTG 161
consensus_9209#1 AATTTCAACGGTCACAATCACTGCCAA-CAACGAAGACGCCG-TGTGTTGAACGAACCTG 131
consensus_9209#3 AATTTCAACGGTCACCATCACTGGCAAACAACGAA-ACGCCGCTGTGTTGAATGAACCTG 147
consensus_9209#5 AATTTCAACGGTCACAATCACTGCCAA-CAACNAAGACGCCG-TGTGTTGAATGAACCTG 161
consensus_9209#2 G--CTAGACGT---AGATTATAGACAACTCACTCAGAGACCT---TTTCCAACGA---TG 169
consensus_9209#4 G--CTAGACGT---AGATTATAGACAACTCACTCAGAGACCT---TTTCCAACGA---TG 143
* *** ** * * *** ** * * ** * * ** ** **
consensus_9209#0 CCAGGGAGGAAGAA-CATCGG-AGAACCACAG----GCAGGACT-ATGTCCACTACGGAA 214
consensus_9209#1 CCAGGGAGGAAGAA-CATCGG-AGAACCACAG----GCAGGACT-ATCTCCACTACGGAA 184
consensus_9209#3 GCAAGGAGCAAGAAACATCGGGAGAAACACAGTGGCGAGTGACT-ATCTCCACTACGGAA 206
consensus_9209#5 CCAGGGAGGAAGAA-CACCGG-AGAACCACAG----GCAGGACC-ATCTCCACTACNGAA 214
consensus_9209#2 GCAGCCTCTAAGGT-TACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAA 228
consensus_9209#4 GCAGCCTCTAAGGT-TACGTTCAAGATTACACTCACCTCCGACCCGAAGCTGCCGTTCAA 202
** *** * * * *** *** * * **
consensus_9209#0 CGTGCTACGGCG---TGGGTAAAGTT---GGATCAC-ACAAC-GGAAAG-GACGGTAAGA 265
consensus_9209#1 CGTGCTACGGCG---TGGGTAAAGTT---GGATCAC-ACAAC-GGAAAG-GACG------ 229
consensus_9209#3 CGTGTTACGGCGGCTTGGGTAAAAGTATGGAATCACCACAACCGGAAAGTGACG------ 260
consensus_9209#5 CGTGCTACGGNG---TGGGTAAAGTT---GGATCAC-NCAAC-GGAAAG-GACG------ 259
consensus_9209#2 GGTGCTA-AGCGTTCCGGAAGCGACA--CCCTTCACGGCGGTTCTAAAA-TTCGC----- 279
consensus_9209#4 GGTGCTA-AGCGTTCCGGAAGCGACA--CCCTTCACGGCGGTTCTAAAA-TTCGC----- 253
*** ** * * ** **** * *** **
consensus_9209#0 TCGGATAATTGCCTAATGTGAGCTGTTAATGAAGAGGTGTTTCTTTAGCATGAAAATACC 325
consensus_9209#1 ------------------------------------------------CATGAAAATACC 241
consensus_9209#3 ---------------------------------------------CAGTTAACAAATACC 275
consensus_9209#5 ------------------------------------------------CATGAAAATAAC 271
consensus_9209#2 -----------------------------------------------GGCGGAAGAGTTC 292
consensus_9209#4 -----------------------------------------------GGCGGAAGAGTTC 266
* * *
consensus_9209#0 GGATGGTCATTGGAGCAGGATG------------AGTGTGCAACAGTGTTGGAACC---G 370
consensus_9209#1 GGATGGTCATTGGAGCAGGATG------------AGTGTGCAACAGTGTTGGAACC---G 286
consensus_9209#3 GGATGGTCACTNAGGANGCACGCGCACTGCACGTGGTNCACACACGTGCTGGGAACCCGG 335
consensus_9209#5 NGATGGT----------------------------------------------------- 278
consensus_9209#2 AAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAG 352
consensus_9209#4 AAAGTGCCCCCAGCGACGAGTGCCATCATTACGGACGATGGTATCGGCATCAACCCGCAG 326
* *
consensus_9209#0 GTCGGGACCCGTATA-CGATCGCGAATCATT-GGTGGAGTTACGTCCAA---CCAGGGCG 425
consensus_9209#1 GTCGGGACCCGTATA-CGATCGCGAATCATT-GGTGGAGTTACGTCCAA---CCAGGGCG 341
consensus_9209#3 GTCGGGACCCGTATAACGATCGCGAATCATTTGGTGGAGTTACGTCCAA---CAGGGGCG 392
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 CAGACAGCTGGCACCGTGTTCCTCAAGCACGGTTCCGAGCTTCGGTTAATTCCCCGCGAT 412
consensus_9209#4 CAGACAGCTGGCACCGTGTTCCTCAAGCACGGT--------------------------- 359
consensus_9209#0 AACAT-CCGTGGCAT-GTGGCTATCTATCTGGATGAGGAGTATCAATGC-GGTGG-CAGT 481
consensus_9209#1 AACAT-CCGTGGCAT-GTGGCTATCTATCTGGATGAGGAGTATCAATGC-GGTGG-CAGT 397
consensus_9209#3 AACATTCCGTGGCATTGTGGGTATCTATCTGGATGAGGAGTATCAATGCCGGTGGGCAGT 452
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 CGCGTCGGATGCCGTTGCTAGTGACCCGCGATAGTTTCCGTTTCAGTGTCGCCTGCTGCT 472
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 ATCATCGGACGACGCTGGATCCTAACGGCGGCCCACTGTTTGACGCGCCAAAACACGAAC 541
consensus_9209#1 ATCATCGGACGACGCTGGATCCTAACGGCGGCCCACTGTNTGACGCGCCAAAACACGAAC 457
consensus_9209#3 ATCATCGGAAGACGCTGGATCCTAACGGCGGCC-ACTGTCTGACGCGCCAAAACACGAAC 511
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 TCGACAGGAATGGGTTCCGTTTCGTCCGTACTGCTGCTACCAACGCAATGTGATACGGCA 532
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 GAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGGGCATCATAGATATCAGTACGATC 601
consensus_9209#1 GAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGGGCATCATAGATATCAGTACGATC 517
consensus_9209#3 GAAACGCTGGACGTGGATCTGTTCCGGGTGTACACGG----------------------- 548
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 CAACTAAAACATCCGCGAGTCCGCTTTGTGCGCAGAAGCATTTTTATTAATCGTTGTTCT 592
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 GATGATCACTTTTATCGTACCGCCGATGAGGTTATTGTTCATCGGGACTACAATCCGGTG 661
consensus_9209#1 GATGATCACTTTTACCGTACCGCCGATGAGGTCATTGTTCATCGGGACTACAATCCGGTG 577
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 GTTCTATTTTTGCTGTGTCGATTGAAATAAATATTTTCTCTCCAT--------------- 637
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 ATGTACACGACGGATATAGGGCTGCTACGGCTCAAGCGTAACATCACCTACAACAGCTTT 721
consensus_9209#1 ATGTACACGACGGATATAGGGCTGCTACGGCTCAAGCGTAACATCACCTACAACAGCTTT 637
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 ATAAAGCCCGTCTGTCTCTACAATCGTACGGTGGACATTAGCACGTTCTATGGCCGCGAG 781
consensus_9209#1 ATAAAGCCCGTCTGTCTCTACAATCGTACGGTGGACATTAGCACGTTCTATGGCCGCGAG 697
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 GGAAAGGTTACCGGCTGGGGATTCAATCGGGACGGCGTGATCAGCAACGTGCTGAACTAT 841
consensus_9209#1 GGAAAGGTTACCGGCTGGGGATTCAATCGGGACGGCGTGA-------------------- 737
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 CTAGAGGTGCCGGTCGTGTCGCAAAAGATGTGCTCCCAGCGGAATGTACAGTTTAATGGA 901
consensus_9209#1 ------------------------------------------------------------
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 GTGCTGGCGGTAGGCGAATCTTTCTGTGCCGGACATGCTGATGGCAACTCCGTGTGCAAT 961
consensus_9209#1 ------------------------------------------------------------
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 GGGGACAGTGGTGGCGGATTAGTGTTTGCCGAAGGCCCACGGTACTACGTCCGCGGCATC 1021
consensus_9209#1 ------------------------------------------------------------
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 GTGTCGATCAGTGCCCAGCGTCGGAACTTACTGCTCTGCGACCCGAACCAATACTCCGTC 1081
consensus_9209#1 ------------------------------------------------------------
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 TTTACCGATGTTTCCAAATTCCTCAACTGGATACGGCAGCAAGTATCGTAGACAGGCGGG 1141
consensus_9209#1 ------------------------------------------------------------
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 CCGGCGCGTTGCTCTTTTATGGAGAGAAAATATTTATTTCAATCGACACAGCAAAAATAG 1201
consensus_9209#1 ------------------------------------------------------------
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 AACAGAACNACGATTAATAAAAATGCTTCTGCGCACAAAAAAATCCAACNNAAAGACAGC 1261
consensus_9209#1 ------------------------------------------------------------
consensus_9209#3 ------------------------------------------------------------
consensus_9209#5 ------------------------------------------------------------
consensus_9209#2 ------------------------------------------------------------
consensus_9209#4 ------------------------------------------------------------
consensus_9209#0 ATGTG 1266
consensus_9209#1 -----
consensus_9209#3 -----
consensus_9209#5 -----
consensus_9209#2 -----
consensus_9209#4 -----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||