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Anopheles gambiae
cluster # 9223 cluster # 9223       Sequences # 15       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9223#0 length = 1825 sequences # 12  
consensus_9223#1 length = 473 sequences # 1  
consensus_9223#2 length = 419 sequences # 1  
consensus_9223#3 length = 140 sequences # 1  

consensusID : consensus_9223#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1825
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGATCGAACGAAAGCGAACTCGCTGGACACGGGAGCGCGTATCTCCGTTTGGCGTTAGATCGGCTTTGCTTGCTGCGCTACGTCACACTGTAACTAGGGTGCCAACCACCACCACCACCACCTCCTATCAATTTAAATACTCGCTTCTCCTCCCCCCTTTCCGGGTATCAGCACATACGCCACGCGGTTATCGTTCCTTCCGTACGTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACA---GAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATTCGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCG-AGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGG-AACTGTCGCGTGC-G-TCCGGCTCGGTCGCCCT-GTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTA-CCTGCCCAAGCTGTGCAGCGGCGAACACATCGGCGCCCTGGCCATGTCCGAGGCCGGCTCGGGCAGCGATGTCGTGTCGATGAAGCTGCGGGCCGACAAGCACGGCGACTACTACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGGACACGTACGTCATCTACGCGAAGACGGACACGAGCGCGAAACCGCAGCACGGCATTACCGCGTTCATTGTCGAGCGCGGCACGGCCGGGTTCACGCAGGGCCCGAAGCTGGACAAGCTGGGCATCCGGGGCAGCCCGACCGGGGAGCTGATCTTCGAGGACGCGAAGGTGCCGGCCGGCAACATTCTCGGCGGGCTGAACAAGGGCGTGTACGTGCTGATGTCGGGGCTGGATCTGGAGCGGCTCGTGCTGGCCGCCGGTCCGGTCGGGCTGATGCAGGCGGCCTGCGACGTGGCGTTCGAGTATGCGCACTCGCGCAAGCAGTTCAACACGCGCATCGGCGAGTTTCAGCTGCTGCAGGGCAAGATGGCCGACATGTACACGACGATGAACGCGTGCCGGGCGTACCTGTACTCGGTGGCGCTGGCCTGCGACCGCGGCCAGGCCAATCCGAAGGACTGCGCGGGCGTCATCCTGTACTGTGCCGAGAAGGCGACGCAGGTCGCGCTCGACGCGATCCAGATCCTCGGCGGCAACGGGTACATCAACGACTATCCGACCGGGCGGATCATGCGCGACTGCAAGCTGTACGAGATCGGCGCTGGTACGTCCGAAATTAGGCGCATGCTGATCGGGCGCGCCCTAAACAAGGAGTACCAGTGATGGTTGAGGGCGAAGCAGAGCGAAACCGACAGCAAACACTGACCGACGCTGCCATATCGGCGTTTGGCTGTGGTTGACACAGCAAAACGACCGCCAATAATTCCAAGCAAAAAAGTGCATTTACTAGAGTTAGTGTCCAGGAAACGTTTTATGAAAACGTTTGGTGGAAAATCGAAACCCTTTTGCTACTCCCGCTAATCTGTAATATACTGTTG]

[+] EMBL BM646216             [CCGCCCACGCGTCCGCCCACGCGTCCGGATCGAACGAAAGCGAACTCGCTGGACACGGGAGCGCGTATCTCCGTTTGGCGTTAGATCGGCTTTGCTTGCTGCGCTACGTCACACTGTAACTAGGGTGCCAACCACCACCACCACCACCTCCTATCAATTTAAATACTCGCTTCTCCTCCCCCCTTTCCGGGTATCAGCACATACGCCACGCGGTTATCGTTCCTTCCGTACGTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACA   GAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGA TCGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCG AGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM601771             [                              ccgACGAAAGCGAACTCGCTGGACACGGGAGCGCGTATCTCCGTTTGGCGTTAGATCGGCTTTGCTTGCTGCGCTACGTCACACTGTAACTAGGGTGCCAACCACCACCACCACCACCTCCTATCAATTTAAATACTCGCTTCTCCTCCCCCCTTTCCGGGTATCAGCACATACGCCACGCGGTTATCGTTCCTTCCGTACGTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACA   GAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATCCGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCG AGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGG AACTGTCGCGTGC G TC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM646529             [                                     ccGCGAACTCGCTGGACACGGGAGCGCGTATCTCCGTTTGGCGTTAGATCGGCTTTGCTTGCTGCGCTACGTCACACTGTAACTAGCGTGCCAACCACCACCACCACCACCTCCTATCAATTTAAATACTCCCTTCTCCT CCCCCTTTCCGGGTATCAGCACATACGCCACGCGGTTATCGTTCCTTCCGTACGTTC  GTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACAGAGGAGGGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTTCTGTCCGCTAGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM615262             [                                                                                                                                                        ccgAATTTAAATACTCGCTTCTCCTCCCCCCTTTCCGGGTATCAGCACATACGCCACGCGGTTATCGTTCCTTCCGTACGTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACA   GAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATTCGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCG AGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGGAAACTGTCGCGTGCGG TCCGGCTCGGTCGCCCT GTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTA CCTGCCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM598534             [                                                                                                                                                                                                              ccgGCGGTTATCGTTCCTTCCGTACGTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACA   GAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATTCGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCGAAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGGAAACTGTCGCGTGC GATCCGGCTCGGTCGCCCTGGTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTACCCTGCCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM633855             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGGCGCAAGCTGGGCG AGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGG AACTGTCGCGTGC G TCCGGCTCGGTCGCCCT GTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTA CCTGCCCAAGCTGTGCAGTGGCGAACACATCGGCGCCCTGGCCATGTCCGAGGCCGGCTCGGGCAGCGACGTCGTGTCGATGAAGCTGCGGGCCGACAAGCACGGCGACTACTACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGGACACGTACGTCATCTACGCGAAGACGGACACGAGCGCGAAACCGCAGCACGGCATTACCGCTTTCATTGTCGAGCGCGGCACGGCCGGGTTCACGCAGGGCCCGAAGCTGGACAAGCTGGGCATCCGGGGCAGCCCGACCGGTGAGCTGATCTTCGAGGACGCGAAGGTGCCGGCCGGCAACATTCTCGGCGGGCTGAACAAGGGCGTGTACGTGCTGATGTCGGGGCTGGATCTGGAGCGGCTCGTGCTGGCCGCCGGTCCGGTCGGGCTGATGCAGGCGGCCTGCGACGTGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX615539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGG AACTGTCGCGTGC G TCCGGCTCGGTCGCCCT GTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTA CCTGCCCAAGCTGTGCAGCGGCGAACACATCGGCGCCCTGGCCATGTCCGAGGCCGGCTCGGGCAGCGATGTCGTGTCGATGAAGCTGCGGGCCGACAAGCACGGCGACTACTACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGGACACGTACGTCATCTACGCGAAGACGGACACGAGCGCGAAACCGCAGCACGGCATTACCGCGTTCATTGTCGAGCGTGGCACGGCCGGGTTCACGCAGGGCCCGAAGCTGGACAAGCTGGGCATCCGGGGCAGCCCTACCGGGGAGCTGATCTTCGAGGACGCGAAGGTGCCGGCCGGCAACATTCTCGGCGGGCTGAACAAGGGCGTGTACGTGCTGATGTCGGGGCTGGATCTGGAGCGGCTCGTGCTGGCCGCCGGTCCGGTCGGGCTGATGCAGGCGGCCTGCGACGTGGCGTTCGAGTATGCGCACTCGCGCAAGCAGTTCAACACGCGCATCGGCGAGTTTCAGCTGCTGCAGGGCAAGATGGCCGACATGTACACGACGATGAACGCGTGCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX604395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCGTGC G TCCGGCTCGGTCGCCCT GTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTA CCTGCCCAAGCTGTGCAGCGGCGAACACATCGGCGCCCTGGCCATGTCCGAGGCCGGCTCGGGCAGCGATGTCGTGTCTATGAAGCTGCGGGCCGACAAGCACGGCGACTACTACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTTGCGGACACGTACGTCATCTACGCGAAGACGGACACGAGCGCGAAACCGCAGCACGGCATTACCGCGTTCATTGTCGAGCGCGGCACGGCCGGGTTCACGCAGGGCCCGAAGCTGGACAAGCTGGGCATCCGGGGCAGCCCGACCGGGGAGCTGATCTTCGAGGACGCGAAGGTGCCGGCCGGCAACATTCTCGGCGGGCTGAACAAGGGCGTGTACGTGCTGATGTCGGGGCTGGATCTGGAGCGGCTCGTGCTGGCCGCCGGTCCGGTCGGGCTGATGCAGGCGGCTTGCGACGTGGCGTTCGAGTATGCGCACTCGCGCAAGCAGTTCAACACGCGCATCGGCGAGTTTCAGCTGCTGCAGGGCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX606078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCGCGGCACGGCCGGGGTCACGCAGGGCCCGAAGCTGGACAAGCCGGGCACCCGGGGCAGCCCGACCGGGGAGCCGAACATCGAGGACGCGAAGGGGCCGGCCGGCAACAaacacg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AGA281508            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGGCTGAACAAGGGCGTGTACGTGCTGATGTCGGGGCTGGATCTGGAGCGGCTCGTGCTGGCCGCCGGTCCGGTCGGGCTGATGCAGGCGGCCTGCGACGTGGCGTTCGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX619031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGTTCAACACGCGCATCGGCGAGTTTCAGCTGCTGCAGGGCAAGATGGCCGACATGTACACGACGATGAACGCGTGCCGGGCGTACCTGTACTCGGTGGCGCTGGCCTGCGACCGCGGCCAGGCCAATCCGAAGGACTGCGCGGGCGTCATCCTGTACTGTGCCGAGAAGGCGACGCAGGTCGCGCTCGACGCGATCCAGATCCTCGGCGGCAACGGGTACATCAACGACTATCCGACCGGGCGGATCATGCGCGACTGCAAGCTGTACGAGATCGGCGCTGGTACGTCCGAAATTAGGCGCATGCTGATCGGGCGCGCCCTAAACAAGGAGTACCAGTGATGGTTGAGGGCGAAGCAGAGCGAAACCGACAGCAAACACTGACCGACGCTGCCATATCGGCGTTTGGCTGTGGTTGACACAGCAAAACGACCGCCAATAATTCCAAGCAAAAAAGTGCATTTACTAGAGTTAGTGTCCAGGAAACGTTTTATGAAAACGTTTGGTGGAAAATCGAAACCCTTTTGCTACTCCCGCTAATCTGTAATATACTGTTG]
[-] EMBL CNS08JF6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TATCCGACCGGCCGGATCATGCGCGACTGCAAGCTGTACGAGATCGGCGCTGGTACGTCCGAAATTAGGCGCATGCTGATCGGGCGCGCCCTAAACAAGGAGTACCAGTGATGGTTGAGGGCGGAGCAGAGCGAAACCGACAGCAAACACTGACCGACGCTGCCATATCGGGGTTTGGCTATGGTTGAGACAGCTAAACGACCGCCAATAATACCAAGCAAAAAAGaaaccta                                                                                             ]


>consensus_9223#0 CCGCCCACGCGTCCGCCCACGCGTCCGGATCGAACGAAAGCGAACTCGCTGGACACGGGA GCGCGTATCTCCGTTTGGCGTTAGATCGGCTTTGCTTGCTGCGCTACGTCACACTGTAAC TAGGGTGCCAACCACCACCACCACCACCTCCTATCAATTTAAATACTCGCTTCTCCTCCC CCCTTTCCGGGTATCAGCACATACGCCACGCGGTTATCGTTCCTTCCGTACGTTCGTGTG TGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGC ACAGAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCT GTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATTCGTGGGGCGGTTCGTTCGTTGTGCCCG CCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGC AACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGG AGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCGAGA TGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTG ACCACTGCATCGTGAACGAGGAACTGTCGCGTGCGTCCGGCTCGGTCGCCCTGTCCTACG GTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGG AGCGCTACCTGCCCAAGCTGTGCAGCGGCGAACACATCGGCGCCCTGGCCATGTCCGAGG CCGGCTCGGGCAGCGATGTCGTGTCGATGAAGCTGCGGGCCGACAAGCACGGCGACTACT ACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGGACACGTACGTCA TCTACGCGAAGACGGACACGAGCGCGAAACCGCAGCACGGCATTACCGCGTTCATTGTCG AGCGCGGCACGGCCGGGTTCACGCAGGGCCCGAAGCTGGACAAGCTGGGCATCCGGGGCA GCCCGACCGGGGAGCTGATCTTCGAGGACGCGAAGGTGCCGGCCGGCAACATTCTCGGCG GGCTGAACAAGGGCGTGTACGTGCTGATGTCGGGGCTGGATCTGGAGCGGCTCGTGCTGG CCGCCGGTCCGGTCGGGCTGATGCAGGCGGCCTGCGACGTGGCGTTCGAGTATGCGCACT CGCGCAAGCAGTTCAACACGCGCATCGGCGAGTTTCAGCTGCTGCAGGGCAAGATGGCCG ACATGTACACGACGATGAACGCGTGCCGGGCGTACCTGTACTCGGTGGCGCTGGCCTGCG ACCGCGGCCAGGCCAATCCGAAGGACTGCGCGGGCGTCATCCTGTACTGTGCCGAGAAGG CGACGCAGGTCGCGCTCGACGCGATCCAGATCCTCGGCGGCAACGGGTACATCAACGACT ATCCGACCGGGCGGATCATGCGCGACTGCAAGCTGTACGAGATCGGCGCTGGTACGTCCG AAATTAGGCGCATGCTGATCGGGCGCGCCCTAAACAAGGAGTACCAGTGATGGTTGAGGG CGAAGCAGAGCGAAACCGACAGCAAACACTGACCGACGCTGCCATATCGGCGTTTGGCTG TGGTTGACACAGCAAAACGACCGCCAATAATTCCAAGCAAAAAAGTGCATTTACTAGAGT TAGTGTCCAGGAAACGTTTTATGAAAACGTTTGGTGGAAAATCGAAACCCTTTTGCTACT CCCGCTAATCTGTAATATACTGTTG



consensusID : consensus_9223#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 473
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGCGGTTATCGTTCCTTCCGTACGTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACAGAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATCGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCGAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCCGAGTACGGTGGGCTCGGCGGATCGT]

[+] EMBL BM603984             [CCGCCCACGCGTCCGCCCACGCGTCCGCGCGGTTATCGTTCCTTCCGTACGTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCACAGAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATCGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCGAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCCGAGTACGGTGGGCTCGGCGGATCGT]


>consensus_9223#1 CCGCCCACGCGTCCGCCCACGCGTCCGCGCGGTTATCGTTCCTTCCGTACGTTCGTGTGT GTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGCA CAGAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCTG TCCGCCAGGTTGGCCCCGAGCCAAGCCCGATCGTGGGGCGGTTCGTTCGTTGTGCCCGCC CGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGCAA CAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGGAG ATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCGAGATG GGAGTGCTCGGCGTGACGGTAAAGCCCCGAGTACGGTGGGCTCGGCGGATCGT



consensusID : consensus_9223#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 419
fasta sequence
                              [AGCTCGATTGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCTTCTGGCGCAACTGGGCGAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGGAATTGTCGCGTGCGTCCGGCTCGGTCGCCCTGTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTACCTGCCCAAGCTGTGCAGTGGCGAACACATCGGCGCCCTGGCCATGTCCGAGGCCGGCTCGGGCAGCGACGTCGTGTCGATGAAGCTGCGGGCCGACAAGCACGGCGACTACTACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGG]

[+] EMBL CNS08JF5             [AGCTCGATTGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCTTCTGGCGCAACTGGGCGAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTGACCACTGCATCGTGAACGAGGAATTGTCGCGTGCGTCCGGCTCGGTCGCCCTGTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGGAGCGCTACCTGCCCAAGCTGTGCAGTGGCGAACACATCGGCGCCCTGGCCATGTCCGAGGCCGGCTCGGGCAGCGACGTCGTGTCGATGAAGCTGCGGGCCGACAAGCACGGCGACTACTACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGG]


>consensus_9223#2 AGCTCGATTGTGGGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCTTCTGGCGCA ACTGGGCGAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGG ATCGTACCTTGACCACTGCATCGTGAACGAGGAATTGTCGCGTGCGTCCGGCTCGGTCGC CCTGTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGA CGAGCAGAAGGAGCGCTACCTGCCCAAGCTGTGCAGTGGCGAACACATCGGCGCCCTGGC CATGTCCGAGGCCGGCTCGGGCAGCGACGTCGTGTCGATGAAGCTGCGGGCCGACAAGCA CGGCGACTACTACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGG



consensusID : consensus_9223#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 140
fasta sequence
                              [CCGCGGACGCGTGGGTTTGGCTGTGATTGACACAGCAAAACTACCGCCAATAATTCCAAGCAAAAAAGTGCATTTACTAGAGTTAGTGTCCAGGGAACGTTTTATGAAAACGTTTGGTGGAAAATCGAAACCCTTTTGCT]

[+] EMBL BM609998             [CCGCGGACGCGTGGGTTTGGCTGTGATTGACACAGCAAAACTACCGCCAATAATTCCAAGCAAAAAAGTGCATTTACTAGAGTTAGTGTCCAGGGAACGTTTTATGAAAACGTTTGGTGGAAAATCGAAACCCTTTTGCT]


>consensus_9223#3 CCGCGGACGCGTGGGTTTGGCTGTGATTGACACAGCAAAACTACCGCCAATAATTCCAAG CAAAAAAGTGCATTTACTAGAGTTAGTGTCCAGGGAACGTTTTATGAAAACGTTTGGTGG AAAATCGAAACCCTTTTGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9223#0      CCGCCCACGCGTCCGCCCACGCGTCCGGATCGAACGAAAGCGAACTCGCTGGACACGGGA 60
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      GCGCGTATCTCCGTTTGGCGTTAGATCGGCTTTGCTTGCTGCGCTACGTCACACTGTAAC 120
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      TAGGGTGCCAACCACCACCACCACCACCTCCTATCAATTTAAATACTCGCTTCTCCTCCC 180
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      CCCTTTCCGGGTATCAGCACATACGCCACGCGGTTATCGTTCCTTCCGTACGTTCGTGTG 240
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      TGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACACTTGCCGCAGAATAAGAAGGC 300
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      ACAGAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGGCAAGGTTCCT 360
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      GTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATTCGTGGGGCGGTTCGTTCGTTGTGCCCG 420
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      CCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGGAAGATCAGC 480
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      AACAGCTGCGCCAAACCGTGTTCAACTTTGCGCAAAAAGAATTGGCTCCCTTGGCACAGG 540
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      AGATCGACAAGCAGAATGAATTCAAAGAGATGCGCAGCTTCTGGCGCAAGCTGGGCGAGA 600
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      TGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGGATCGTACCTTG 660
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      ACCACTGCATCGTGAACGAGGAACTGTCGCGTGCGTCCGGCTCGGTCGCCCTGTCCTACG 720
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      GTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGGACGAGCAGAAGG 780
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      AGCGCTACCTGCCCAAGCTGTGCAGCGGCGAACACATCGGCGCCCTGGCCATGTCCGAGG 840
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      CCGGCTCGGGCAGCGATGTCGTGTCGATGAAGCTGCGGGCCGACAAGCACGGCGACTACT 900
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      ACGTGCTGAATGGTAGCAAGTTCTGGATCACCAACGGCCCAGTGGCGGACACGTACGTCA 960
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      TCTACGCGAAGACGGACACGAGCGCGAAACCGCAGCACGGCATTACCGCGTTCATTGTCG 1020
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      AGCGCGGCACGGCCGGGTTCACGCAGGGCCCGAAGCTGGACAAGCTGGGCATCCGGGGCA 1080
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      GCCCGACCGGGGAGCTGATCTTCGAGGACGCGAAGGTGCCGGCCGGCAACATTCTCGGCG 1140
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      GGCTGAACAAGGGCGTGTACGTGCTGATGTCGGGGCTGGATCTGGAGCGGCTCGTGCTGG 1200
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      CCGCCGGTCCGGTCGGGCTGATGCAGGCGGCCTGCGACGTGGCGTTCGAGTATGCGCACT 1260
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      CGCGCAAGCAGTTCAACACGCGCATCGGCGAGTTTCAGCTGCTGCAGGGCAAGATGGCCG 1320
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ------------------------------------------------------------
consensus_9223#1      ------------------------------------------------------------
                                                                                  

consensus_9223#0      ACATGTACACGACGATGAACGCGTGCCGGGCGTACCTGTACTCGGTGGCGCTGGCCTGCG 1380
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      -----------------------------------------------------------A 1
consensus_9223#1      ----------CCGCCCACGCGTCCGCCCACGCGTCCGCGCGGTTATCGTTCCTTCCGTAC 50
                                                                                  

consensus_9223#0      ACCGCGGCCAG-GCCAATCCGAAGGACTGCGCGGGCGTCATCCTGTACTGTGCCGAGAAG 1439
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      GCTCGATTGTG-GGGCGGTTCGTTCGTTGTGCCCGCCCGGTCCATGCAGCTTCTGGCGCA 60
consensus_9223#1      GTTCGTGTGTGTGTGTGGTGGTGTTGTTTTGCGTTGTTGGTGCGAACA-CTTGCCGCAGA 109
                                                                                  

consensus_9223#0      GCGACGCAGGTCGCGCTCGACGCGATCCAGATCCTCGGCGGCAACGGGTACATCAACGAC 1499
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ACTGGGCGAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCGAGTACGGTGGGCTCGGCGG 120
consensus_9223#1      ATAAGAAGGCACAGAGCGAGTAGGGCAAAATGTCAGCAATACGCAACCTAACGACTGCGG 169
                                                                                  

consensus_9223#0      TATCCGACCGGGCGGATCATGCGCGACTGCAAGCTGTACGAGATCGGC-GCTGGTACGTC 1558
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      ATCGTACCTTGACCACTGCATCGTGAACGAGGAATTGTCGCGTGCGTC-CGGCTCGGTCG 179
consensus_9223#1      CAAGGTTCCTGTCCGCCAGGTTGGCCCCGAGCCAAGCCCGATCGTGGGGCGGTTCGTTCG 229
                                                                                  

consensus_9223#0      CGAAATTAGGCGCATGCTGATCGGGCGCGCCCTAAACAAGGAGTACCAGTGATGGTTGAG 1618
consensus_9223#3      ------------------------------------------------------------
consensus_9223#2      CCCTGTCCTACGGTGCCCACTCGAACCTGTGCGTCAATCAGATCCATCGGCACGGTACGG 239
consensus_9223#1      TTGTGCCCGCCCGGTCCATGCAGCACTATCCGATCGATGAGTATCTGTTCGGCTTGACGG 289
                                                                                  

consensus_9223#0      GGCGAAGCAGAGCGAAACCGACAGCAAACACTGACCGACGCTGCCATATCGGCG-TTTGG 1677
consensus_9223#3      -------------------------------------CCGCGGACGCGTGGG---TTTGG 20
consensus_9223#2      ACGAGCAGAAGGAGCGCTACCTGCCCAAGCTGTGCAGTGGCGAACACATCGGCGCCCTGG 299
consensus_9223#1      AAGATCAGCAACAGCTGCGCCAAACCG---TGTTCAACTTTGCGCAAAAAGA---ATTGG 343
                                                                  *     *      ***

consensus_9223#0      CTGTGGTTG-ACAC-AGCAAAACGACCGCCAATAATTCCAAGCAAAAAAGTGCATTTACT 1735
consensus_9223#3      CTGTGATTG-ACAC-AGCAAAACTACCGCCAATAATTCCAAGCAAAAAAGTGCATTTACT 78
consensus_9223#2      CCATGTCCG-AGGCCGGCTCGGGCAGCGACGTCGTGTCGATG--AAGCTGCGGGCCGACA 356
consensus_9223#1      CTCCCTTGGCACAGGAGATCGACAAGCAGAATGAATTCAAAG---AGATGCGCAGCTTCT 400
                      *       * *     *       * *         ** * *   *   * *      * 

consensus_9223#0      AGAGTT-----AGTGTCCAGGAAACGTT--TTATGAAAACGTTTGGTGGAAAATCGAAAC 1788
consensus_9223#3      AGAGTT-----AGTGTCCAGGGAACGTT--TTATGAAAACGTTTGGTGGAAAATCGAAAC 131
consensus_9223#2      AGCAC------GGCGACTACTACGTGCT--GAATGGTAGCAAGTTCTGGATCACCAACGG 408
consensus_9223#1      GGCGCAAGCTGGGCGAGATGGGAGTGCTCGGCGTGACGGTAAAGCCCCGAGTACGGTGGG 460
                       *          * *          * *     **             **  *       

consensus_9223#0      CCTTTTGCTACTCCCGCTAATCTGTAATATACTGTTG 1825
consensus_9223#3      CCTTTTGCT---------------------------- 140
consensus_9223#2      CCCAGTGGCGG-------------------------- 419
consensus_9223#1      CTCGGCGGATCGT------------------------ 473
                      *     *                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)