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Anopheles gambiae
cluster # 9230 cluster # 9230       Sequences # 15       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9230#0 length = 1253 sequences # 14  
consensus_9230#1 length = 639 sequences # 1  

consensusID : consensus_9230#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1253
fasta sequence
                              [ATCTCTTTTGAGCATG-TTTTGGTTTAGTTGCGTGAAATTACACCGGTGCTAGAAATTAATTAGAAAACGTTGGAAATGTCTGGG-TTTGTAAAACGTAAACGCGCT-TTAAATATTAATGGAACACGGCTTTCAGTGTATACGG-GACAGTCTATAATTTCTTTGGGAAACCCTTCATTAGATCATGTTTTCGGTGGCGGATTTCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCATGGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAA-GAATTGTAAACAAACACCCACTTGTGGTGGCCACTATGGATGAAGATGCTA-CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCC-GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC-AAAAACGTGCTACGAATTT-GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGA-TTTTTCGTTTGACTTGGAAGCATTTGCTGGTCAAATGGAAGAGCAGGCAAATCCCGCTTTCAAAGAGTACCATGGCTTGTTGAATATTACCAAAATTACACCGTTTAATAGTTTGGCATCCTATCACCCGAAGACGCGTGATTTAG-CGTTTAAGCTGAAACGC-AGCAAATTCGTTATCGAAAAGTTACATCTTCCACCGGATATAGCGGATGAGGACGGTGCAAGCAAAAGCCAAGTGCCTGCAATGAGTTGTGCTAGCGTAGGAGGCAAAAGCAAGCTGGATTTTTAGCCGCACGTCCTAAGCGATTGAGCAGAGCGACACCGTGCGCAAATACATTAGACGTTTAAAAATTGGACAAAA]

[+] EMBL CNS096TF             [ATCTCTTTTGAGCATG TTTTGGTTTAGTTGCGTGAAATTACACCGGTGCTAGAAATTAATTAGAAAACGTTGGAAATGTCTGGGCTTTGTAAAACGTAAACGCGCT TTAAATATTAATGGAACACGGCTTTCAGTGTATACGG GACAGTCTATAATTTCTTTGGGAAACCCTTCATTAGATCATGTTTTCGGTGGCGGATTTCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCATGGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAA GAATTGTAAACAAACACCCACTTGTGGTGGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAGACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAATTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCC GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGA TTTTTCGTTTGACTTGGAAGCATTTGC                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08TBJ             [            CATGTTTTTGGTTTAGTTGCGTGAAATTACACCGGTGCTAGAAATTAATTAGAAAACGTTGGAAATGTCTGGG TTTGTAAAACGTAAACGCGCT TTAAATATTAATGGAACACGGCTTTCAGTGTATACGGTGACAGTCTATAATTTCTTTGGGAAACCCTTCATTAGATCATGTTTTCGGTGGCGGATTTCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCATGGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAA GAATTGTAAACAAACACCCACTTGTGGTGGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAAAAAAAATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCC GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AL932043             [                  TTCGGTTTAGTTGCGTGAAATTACACCGGTGCTAGAAATTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08WQE             [                           GTTGCGTGAAATTACACCGGTGCTAGAAATTAATTAGAAAACGTTGGAAATGTCTGGG TTTGTAAAACGTAAACGCGCTATTAAATATTAATGGAACACGGCTTTCAGTGTATACGG GACAGTCTATAATTTCTTTGGGAAACCCTTCATTAGATCATGTTTTCGGTGGCGGATTTCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCATGGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAA GAATTGTAAACAAACACCCACTTGTGGTGGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCC GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08NRL             [                             TGCGTGAAATTACACCGGTGCTAGAAATTAATTAGAAAACGTTGGAAATGTCTGGG TTTGTAAAACGTAAACGCGCT TTAAATATTAATGGAACACGGCTTTCAGTGTATACGGTGACAGTCTATAATTTCTTTGGGAAACCCTTCATTAGATCATGTTTTCGGTGGCGGATTCCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCATGGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAA GAATTGTAAACAAACACCCACTTGTGGTGGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCC GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGA TTTTTCGTTTGACTTGGAAGCATTTGCTGGTCAAATGGAAGAGCAGGCAAATCCCGCTTTCAAAGAGTACCATGGCTTGTTGAATATTACCAAAATTACA                                                                                                                                                                                                                                                                       ]
[+] EMBL BM610845             [                               ccgGAAATTACACCGGTGCTAGAAATTAATTAGAAAACGTTGGAAATGTCTGGA TTTGTGAAACGTAAACGCGCT TTAAATATTAATGGAACACGGCTTTCAGTGCATACGG GACAGTCTATAATTTCTTTGGGAAACCCTTCATTAGATCATGTTTTCGGTGGCGGATTTCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCATGGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAAGGAATTGTAAACAAACACCCACTTGTGGTGGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTTAACAACCCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCA GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAACGTGCTACGAATTTGGTTTAAATTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX606646             [                                                                     GTTGGAAATGTCTGGG TTTGTGAAACGTAAACGCGCT TTAAATATTAATGGAACACGGCTTTCAGTGCATACGG GACAGTCTATAATTTCTTTGGGAAACCCATCATTAGATCATGTTTTTGGTGGTGGATTTCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCATGGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAAGGAATTGTAAACAAACACCCACTTGTGGTGGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM614648             [                                                                                                                                                                                                                                                                       ccgCTAAATATTTTCTCGCCGAAGGAATTGTAAACAAACACCCACTTGTGGTAGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACCCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCC GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCAGTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAAGCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGCGAAATATGTTCGATTTTTTCGTTTGACTTGGA                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS096TG             [                                                                                                                                                                                                                                                                                                             CACCCACTTGT GTGGCCACTATGGATGAAGATGCTACCCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAGACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAATTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCCGGGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGA TTTTTCGTTTGACTTGGAAGCATTTGCTGGTCAAATGGAAGAGCAGGCAAATCCCGCTTTCAAAGAGTACCATGGCTTGTTGAATATTACCAAAATTACACCGTTTAATAGTTTGGCATCCTATCACCCGAAGACGCGTGATTTAG CGTTTAAGCTGAAACGC AGCAAATTCGTTATCGAAAAGTTACATCTTCCACCGGATATAGCGGATGAGGACGGTGCAAGCAAAAGCCAAGTGCCTGCAATGAGTTGTGCTAGCGTAGGAGGCAAAAGCAAGCTGGATTTTTAGCCGCACGTCCTAAGCGATTGAGCAGAGCGACACCGTGCGCAAATACATTAGACGTTTAAAAATTGGACAAAA]
[-] EMBL CNS08NRM             [                                                                                                                                                                                                                                                                                                                           GGCCACTATGGATGAAGATGCTA CCCAATTGATAAACAAATTACCAACACCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCC GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCC AAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGA TTTTTCGTTTGACTTGGAAGCATTTGCTGGTCAAATGGAAGAGCAGGCAAATCCCGCTTTCAAAGAGTACCATGGCTTGTTGAATATTACCAAAATTACACCGTTTAATAGTTTGGCATCCTATCACCCGAAGACGCGTGATTTAG CGTTTAAGCTGAAACGC AGCAAATTCGTTATCGAAAAGTTACATCTTCCACCGGATATAGCGGATGAGGACGGTGCAAGCAAAAGCCAAGTGCCTGCAA                                                                                                                    ]
[+] EMBL CNS09B91             [                                                                                                                                                                                                                                                                                                                                                                                                CAGATGATAACAACTCCACCATGCCAGAGCCGGAAATTATGCGGATTGACTTTCGGTACAATCAGAAAACTCCTGTAAATTCCGAACAGAAACCTGCAACTTCGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08TBK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCCTTTTTCCGTAGTAAAGCC GGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCCAAAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGA TTTTTCGTTTGACTTGGAAGCATTTGCTGGTCAAATGGAAGAGCAGGCAAATCCCGCTTTCAAAGAGTACCATGGCTTGTTGAATATTACCAAAATTACACCGTTTAATAGTTTGGCATCCTATCACCCGAAGACGCGTGATTTAG CGTTTAAGCTGAAACGC AGCAAATTCGTTATCGAAAAGTTACATCTTCCACCGGATATAGCGGATGAGGACGGTGCAAGCAAAAGCCAAGTGCCTGCAATGAGTTGTGCTAGCGTAGGAGGCAAAAGCAAGCTGGATTTTTAGCCGCACGTCCTAAGCGATTGAGCAGAGCGACACCGTGCGCAAATACATTAGACGTTTAGCAACTGG      ]
[-] EMBL CNS08WQF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        atTTTAATGCTTCTTCTTACTAAAGCTCC AAAAACGTGCTACGAATTT GTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGA TTTTTCGTTTGACTTGGAAGCATTTGCTGGTCAAATGGAAGAGCAGGCAAATCCCGCTTTCAAAGAGTACCATGGCTTGTTGAATATTACCAAAATTACACCGTTTAATAGTTTGGCATCCTATCACCCGAAGACGCGTGATTTAG CGTTTAAGCTGAAACGC AGCAAATTCGTTATCGAAAAGTTACATCTTCCACCGGATATAGCGGATGAGGACGGTGCAAGCAAAAGCCAAGTGCCTGCAATGAGTTGTGCTAGCGTAGGAGGCAAAAGCAAGCTGGATTTTTAGCCGCACGTCCTAAGCGATTGAGCAGAGCGACACCGTGCGCA                               ]
[-] EMBL CNS09B92             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGACGCGTGATTTAGTCGTTTAAGCTGAAACGCTAGCAAATTCGTTATCGAAAAGTTACATCTTCCACCGGATATAGCGGATGAGGACGGTGCAAGCAAAAGCCAAGTGCCTGCAATGAGTTGTGCTAGCGTAGGAGGCAAAAGCAAGCTGGATTTTTAGCCTCAC                                                                  ]


>consensus_9230#0 ATCTCTTTTGAGCATGTTTTGGTTTAGTTGCGTGAAATTACACCGGTGCTAGAAATTAAT TAGAAAACGTTGGAAATGTCTGGGTTTGTAAAACGTAAACGCGCTTTAAATATTAATGGA ACACGGCTTTCAGTGTATACGGGACAGTCTATAATTTCTTTGGGAAACCCTTCATTAGAT CATGTTTTCGGTGGCGGATTTCCCATTGGTTCCATCATTGGAATAGGTGAAGATAAGCAT GGAAATTATGCTAGAGTGTTGTCTAAATATTTTCTCGCCGAAGAATTGTAAACAAACACC CACTTGTGGTGGCCACTATGGATGAAGATGCTACCCAATTGATAAACAAATTACCAACAC CGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGC GGATTGCCTTTCGGTACAATCAGCTAACTCCTGTAGATTCCGAACAGAAACCTGCAACTT CGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTTATTAGCCCACG ATGTAACCTGCTGGAACGGAGGCGAACTAGAAACAAATGCGCCAGAATTTGGTTCGTTCA ACAACTCACATTACGCTTCCCTTTTATCCTGCATCCGTAGTAAAGCCGGCGAACAACAGT TTAATGCTGCTTCGGACGAAAGCTCCAAAAACGTGCTACGAATTTGTTTAAATTCTATGG GCTCACCATTGTGGTATGGCAAGCACTTCTCGGAAGATTTTCTGCGGTTCATGGTGTTGT TAAAATCTATCGTGCGCAACACGCTTTCAGTTTGCCTTATTACCGTACCACTACACCTAT TCAACCATCTCGATGATGTATACCTATCCAAAAAGGTGAGAAATATGTTCGATTTTTCGT TTGACTTGGAAGCATTTGCTGGTCAAATGGAAGAGCAGGCAAATCCCGCTTTCAAAGAGT ACCATGGCTTGTTGAATATTACCAAAATTACACCGTTTAATAGTTTGGCATCCTATCACC CGAAGACGCGTGATTTAGCGTTTAAGCTGAAACGCAGCAAATTCGTTATCGAAAAGTTAC ATCTTCCACCGGATATAGCGGATGAGGACGGTGCAAGCAAAAGCCAAGTGCCTGCAATGA GTTGTGCTAGCGTAGGAGGCAAAAGCAAGCTGGATTTTTAGCCGCACGTCCTAAGCGATT GAGCAGAGCGACACCGTGCGCAAATACATTAGACGTTTAAAAATTGGACAAAA



consensusID : consensus_9230#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence
                              [AAATCGCCCCCACNGATTATCGGGTCGCAGCGTGAAANCNACACCCGGTGCTACAAATTATTNAACACGCTTGGACAATGTCTGGATATTGTGAAACGTANACGCGCTTTAAATATTAATGGAACACGGCGTTTCAGATGCAGTACGGGACAGTCTCATAACATTCTTTGGGAAACCCCTANCATTAGATCATGTTTTCGGTGGCGGATTTCCCCATTGGTTCCCATCCATTGGCAATANGTGAAGATAAGCATGGCAACATTATAGCTCAGCAGTGTATGTCTCAAATCATATTTCTCGCCGGAAGGGAATTNGTAAACAAACACCCACTTGTGGTGGCCATTCATGGATGAAGATGCTACCCAATTGATAAACAAATTACCAACACGCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGGCTAACTCCTGTAGATNCCGAAGCAGAAACCTGCNACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTATTAGCCCACGATGTAACCTGTGGAACGGAGGCGAACCAAACCAATGCGCCAGAATTTGGGTCGNTAACAAACCCACATT]

[+] EMBL AL933100             [AAATCGCCCCCACNGATTATCGGGTCGCAGCGTGAAANCNACACCCGGTGCTACAAATTATTNAACACGCTTGGACAATGTCTGGATATTGTGAAACGTANACGCGCTTTAAATATTAATGGAACACGGCGTTTCAGATGCAGTACGGGACAGTCTCATAACATTCTTTGGGAAACCCCTANCATTAGATCATGTTTTCGGTGGCGGATTTCCCCATTGGTTCCCATCCATTGGCAATANGTGAAGATAAGCATGGCAACATTATAGCTCAGCAGTGTATGTCTCAAATCATATTTCTCGCCGGAAGGGAATTNGTAAACAAACACCCACTTGTGGTGGCCATTCATGGATGAAGATGCTACCCAATTGATAAACAAATTACCAACACGCGCTTGAGGAAAGCAAAACAGCTGATAACAACTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGGCTAACTCCTGTAGATNCCGAAGCAGAAACCTGCNACTTCGCTTGGACACTACTTCGACCTTACCAAAACGATGAGTCCTGATATGTATTAGCCCACGATGTAACCTGTGGAACGGAGGCGAACCAAACCAATGCGCCAGAATTTGGGTCGNTAACAAACCCACATT]


>consensus_9230#1 AAATCGCCCCCACNGATTATCGGGTCGCAGCGTGAAANCNACACCCGGTGCTACAAATTA TTNAACACGCTTGGACAATGTCTGGATATTGTGAAACGTANACGCGCTTTAAATATTAAT GGAACACGGCGTTTCAGATGCAGTACGGGACAGTCTCATAACATTCTTTGGGAAACCCCT ANCATTAGATCATGTTTTCGGTGGCGGATTTCCCCATTGGTTCCCATCCATTGGCAATAN GTGAAGATAAGCATGGCAACATTATAGCTCAGCAGTGTATGTCTCAAATCATATTTCTCG CCGGAAGGGAATTNGTAAACAAACACCCACTTGTGGTGGCCATTCATGGATGAAGATGCT ACCCAATTGATAAACAAATTACCAACACGCGCTTGAGGAAAGCAAAACAGCTGATAACAA CTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGGCTAACTC CTGTAGATNCCGAAGCAGAAACCTGCNACTTCGCTTGGACACTACTTCGACCTTACCAAA ACGATGAGTCCTGATATGTATTAGCCCACGATGTAACCTGTGGAACGGAGGCGAACCAAA CCAATGCGCCAGAATTTGGGTCGNTAACAAACCCACATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9230#0      ATCTCTTTTGAGCATGTTTTGGTTTAGTTGCGTGAAAT-TACACC-GGTGCTAGAAATTA 58
consensus_9230#1      AAATCGCCCCCACNGATTATCGGGTCGCAGCGTGAAANCNACACCCGGTGCTACAAATTA 60
                      *  **       *   ** * *  * *  ********   ***** ******* ******

consensus_9230#0      ATTAGAAAACGTTGGAAATGTCTGGGT-TTGTAAAACGTAAACGCGCTTTAAATATTAAT 117
consensus_9230#1      TTNAACACGCTTGGACAATGTCTGGATATTGTGAAACGTANACGCGCTTTAAATATTAAT 120
                       * *  *  * * *  ********* * **** ******* *******************

consensus_9230#0      GGAACACGGC-TTTCAG-TGTA-TACGGGACAGTCT-ATAAT-TTCTTTGGGAAACCCTT 172
consensus_9230#1      GGAACACGGCGTTTCAGATGCAGTACGGGACAGTCTCATAACATTCTTTGGGAAACCCCT 180
                      ********** ****** ** * ************* ****  *************** *

consensus_9230#0      --CATTAGATCATGTTTTCGGTGGCGGATTTCCC-ATTGGTTCCA--TCATTGG-AATAG 226
consensus_9230#1      ANCATTAGATCATGTTTTCGGTGGCGGATTTCCCCATTGGTTCCCATCCATTGGCAATAN 240
                        ******************************** *********    ****** **** 

consensus_9230#0      GTGAAGATAAGCATGGAAA--TTATG---CTAGAGTGT-TGTCTAAA--TAT-TTTCTCG 277
consensus_9230#1      GTGAAGATAAGCATGGCAACATTATAGCTCAGCAGTGTATGTCTCAAATCATATTTCTCG 300
                      **************** **  ****    *   ***** ***** **   ** *******

consensus_9230#0      CCGAAGAA----TTGTAAACAAACACCCACTTGTGGTGGCCACT-ATGGATGAAGATGCT 332
consensus_9230#1      CCGGAAGGGAATTNGTAAACAAACACCCACTTGTGGTGGCCATTCATGGATGAAGATGCT 360
                      *** *       * **************************** * ***************

consensus_9230#0      ACCCAATTGATAAACAAATTACCAACAC-CGCTTGAGGAAAGCAAAACAGCTGATAACAA 391
consensus_9230#1      ACCCAATTGATAAACAAATTACCAACACGCGCTTGAGGAAAGCAAAACAGCTGATAACAA 420
                      **************************** *******************************

consensus_9230#0      CTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAG-CTAACTC 450
consensus_9230#1      CTCCACCATGCCAGAGCCGGAAACTATGCGGATTGCCTTTCGGTACAATCAGGCTAACTC 480
                      **************************************************** *******

consensus_9230#0      CTGTAGATTCCGAA-CAGAAACCTGCAACTTCGCTTGGACACTACTTCGACCTTACCAAA 509
consensus_9230#1      CTGTAGATNCCGAAGCAGAAACCTGCNACTTCGCTTGGACACTACTTCGACCTTACCAAA 540
                      ******** ***** *********** *********************************

consensus_9230#0      ACGATGAGTCCTGATATGTTATTAGCCCACGATGTAACCTGCTGGAACGGAGGCGAACTA 569
consensus_9230#1      ACGATGAGTCCTGATATGT-ATTAGCCCACGATGTAACCTG-TGGAACGGAGGCGAACCA 598
                      ******************* ********************* **************** *

consensus_9230#0      GAAACAAATGCGCCAGAATTTGGTTCGTTCAACAACTCACATTACGCTTCCCTTTTATCC 629
consensus_9230#1      --AACCAATGCGCCAGAATTTGGGTCGNTAACAAACCCACATT----------------- 639
                        *** ***************** *** * *  *** ******                 

consensus_9230#0      TGCATCCGTAGTAAAGCCGGCGAACAACAGTTTAATGCTGCTTCGGACGAAAGCTCCAAA 689
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      AACGTGCTACGAATTTGTTTAAATTCTATGGGCTCACCATTGTGGTATGGCAAGCACTTC 749
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      TCGGAAGATTTTCTGCGGTTCATGGTGTTGTTAAAATCTATCGTGCGCAACACGCTTTCA 809
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      GTTTGCCTTATTACCGTACCACTACACCTATTCAACCATCTCGATGATGTATACCTATCC 869
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      AAAAAGGTGAGAAATATGTTCGATTTTTCGTTTGACTTGGAAGCATTTGCTGGTCAAATG 929
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      GAAGAGCAGGCAAATCCCGCTTTCAAAGAGTACCATGGCTTGTTGAATATTACCAAAATT 989
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      ACACCGTTTAATAGTTTGGCATCCTATCACCCGAAGACGCGTGATTTAGCGTTTAAGCTG 1049
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      AAACGCAGCAAATTCGTTATCGAAAAGTTACATCTTCCACCGGATATAGCGGATGAGGAC 1109
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      GGTGCAAGCAAAAGCCAAGTGCCTGCAATGAGTTGTGCTAGCGTAGGAGGCAAAAGCAAG 1169
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      CTGGATTTTTAGCCGCACGTCCTAAGCGATTGAGCAGAGCGACACCGTGCGCAAATACAT 1229
consensus_9230#1      ------------------------------------------------------------
                                                                                  

consensus_9230#0      TAGACGTTTAAAAATTGGACAAAA 1253
consensus_9230#1      ------------------------
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)