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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9237#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1316 fasta sequence
[CCGGTTGCGCATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTGCCTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG-ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCA-CCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG-CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGC-TTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAACAGGGTAA]
[+] EMBL BM582113 [CCGGTTGCGCATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTGCCTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGGAACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAA AAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCG ACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGAC ]
[+] EMBL CNS08YC1 [ CGCATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTG CTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAGCGGAAGTGCCCGCGGGAAGCGTGAGCACCCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAAatat ]
[+] EMBL CNS08XLY [ AGTGAGTGAGAGAGA CCTGCCCGTCCTGCCTGTGCCTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCA CCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGGGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCCGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTT ]
[-] EMBL CNS08XLZ [ ccCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCCCCTGGCGGGGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGGGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACAACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACAACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCTACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGC TTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAA ]
[-] EMBL CNS08H51 [ CGGCTCGTAGTGTTTTACGGTTCCCAAAAAGGCACGGCAGAGGAATTTGCCGGTCCCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGGGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGGGTTCTACCACTGGATTCAAAACAACGATCTGGATATGCCCGGTTTGAATTACGCGGTGAGTGTTGTGCCGGGGCACGTTTGACCCTAAAAAAGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGGACTCCTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGGCTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCGTTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAACA ]
[-] EMBL CNS08YC2 [ AAAATTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGGACTCTTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGC TTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAAACGGGTAA]
consensusID : consensus_9237#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1041 fasta sequence
[CCGGTTCAACGATATCGGCCACAGCAGCAACGCGGAGCGGACGACGACACACGCGGTGCCCCCGTTCTTTGTGTAGCCAAAGTGTACGCCCAAGCGCAAACGCGCCGCAAACAGTCGAACGGCAGCAGCAGCAGCAGCACACACACACACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG-ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTT]
[+] EMBL BM626327 [CCGGTTCAACGATATCGGCCACAGCAGCAACGCGGAGCGGACGACGACACACGCGGTGCCCCCGTTCTTTGTGTAGCCAAAGTGTACGCCCAAGCGCAAACGCGCCGCAAACAGTCGAACGGCAGCAGCAGCAGCAGCACACACACACACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGATAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGGAACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAA AAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGA ]
[+] EMBL BX629272 [ CACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACNACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACC ]
[+] EMBL BX629165 [ CACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACNACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAA ]
[+] EMBL BX626036 [ CTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCCACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTT]
consensusID : consensus_9237#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 652 fasta sequence
[CCGCCCACGCGTCCGGCCAGAGAGTGAGGGAAGAAAAACAGCCAGTCTATCCGTAGCCGCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCG--GTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTGACGATGATGCCAACATCGAGGACTACTTCATCACGTGGAAGGAAAAGTTTTGGCCCACGGTTTGCGACTACTTCGGCATCGAGAGCACGGGCGAGGATGTGCTGATGCGGCAGTACCGCCTGCTGGAGCAGCCGGACGTGAG]
[+] EMBL BM647999 [CCGCCCACGCGTCCGGCCAGAGAGTGAGGGAAGAAAAACAGCCAGTCTATCCGTAGGGCCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCGGTGTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTG ]
[+] EMBL BM614872 [ CCGCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCG GTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTGACGATGATGCCAACATCGAGGACTACTTCATCACGTGGAAGGAAAAGTTTTGGCCCACGGTTTGCGACTACTTCGGCATCGAGAGCACGGGCGAGGATGTGCTGATGCGGCAGTACCGCCTGCTGGAGCAGCCGGACGTGAG]
[+] EMBL BM596928 [ CCG CGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCG GTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTGACGATGATG ]
consensusID : consensus_9237#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence
[CCCACGGTTTATGTTCAATCCGAGATATTCTTTTTACTACAAATCATCAACTCGCAGGACTTTACATCAAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTAGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTATGACCGAATACGCTTATTGTTGTTGCCCGGAAGAAGAAAAGAAGAAGCAACTNTAAACTGATNAAGAAAAGTACAATCACTCGATTCCGATATACGCCTATCGTCTATCCGAAANACGACGATCGTGACTGTAAACTATTGTATTTTTGTTNAACAANGTATCATTGTGCACCAGGTTCTCTTGNAGCCACTGCTTCANTGGAAGACTAGTAGCTGGACAGTCCGCATGATAGCATTACAATGGTTGTCGCATAATATGTTACCGTGTTNTCTCAAACATGTATACAGCGCCCTATATCGGACGCCTCAGTATCTGCANNATCTNTGAAACGGCGTATAATAGCTGTGATATGGTTCATTCAGCTAGNATTNAATCGTGGGTTTCGAGCCTTTTT]
[+] EMBL AL693670 [CCCACGGTTTATGTTCAATCCGAGATATTCTTTTTACTACAAATCATCAACTCGCAGGACTTTACATCAAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTAGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTATGACCGAATACGCTTATTGTTGTTGCCCGGAAGAAGAAAAGAAGAAGCAACTNTAAACTGATNAAGAAAAGTACAATCACTCGATTCCGATATACGCCTATCGTCTATCCGAAANACGACGATCGTGACTGTAAACTATTGTATTTTTGTTNAACAANGTATCATTGTGCACCAGGTTCTCTTGNAGCCACTGCTTCANTGGAAGACTAGTAGCTGGACAGTCCGCATGATAGCATTACAATGGTTGTCGCATAATATGTTACCGTGTTNTCTCAAACATGTATACAGCGCCCTATATCGGACGCCTCAGTATCTGCANNATCTNTGAAACGGCGTATAATAGCTGTGATATGGTTCATTCAGCTAGNATTNAATCGTGGGTTTCGAGCCTTTTT]
consensusID : consensus_9237#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence
[CCGCAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGG]
[+] EMBL BM636565 [CCGCAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9237#1 CCGGTTCAACGATATCGGCCACAGCAGCAACGCGGAGCGGACGACGACACACGCGGTGCC 60
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 ------------------------------------------------------------
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 CCCGTTCTTTGTGTAGCCAAAGTGTACGCCCAAGCGCAAACGCGCCGCAAACAGTCGAAC 120
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 ------------------------------------------------------------
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 GGCAGCAGCAGCAGCAGCACACACACACACACGCGCGCGCAAGGAGTGTGTGTGTAGAGC 180
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 --------------------------------------------------CCGGTTGCGC 10
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 GGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTG 240
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 ATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTGCCTGTGCTG 70
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 TGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTA 300
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 TGTTGCCGTTTGCTAGA---------TTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTA 121
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 GACGCGGACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAA 360
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 GACGCGGACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAA 181
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 AAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCG 420
consensus_9237#4 ------------------------CCGCAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCG 36
consensus_9237#0 AAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCA 241
consensus_9237#3 -----------------------------------------CCCACGGTTTATGTTCAAT 19
consensus_9237#2 ------------------CCGCCCACGCGTCCG-GCCAGAGAGTGAGGGAAGAAAAACAG 41
**
consensus_9237#1 ACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTG 480
consensus_9237#4 ACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTG 96
consensus_9237#0 CCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTG 301
consensus_9237#3 CCGAGATATTCTT---TTTACTACAAATCATCA-ACTCGCAGG---ACTTTACATCAAAG 72
consensus_9237#2 CCAGTCTATCCGT-AGCCGCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAA 100
* * * * * * * * *
consensus_9237#1 CCTGGTATCTGCTCAAGGGCAA----GAAAAAGGAAAGCCAAGCTAG---TCAGTTTAAA 533
consensus_9237#4 CCTGGTATCTGCTCAAGGGCAA----GAAAAAGGAAAGCCAAGCTAG---TCAGTTTAAA 149
consensus_9237#0 CCTGGTATCTGCTCAAGGGCAA----GAAAAAGGAAAGCCAAGCTAG---TCAGTTTAAA 354
consensus_9237#3 CCCGGCATGGGTTCAAGCTTTG----GA---CGTGTCTCCATACT-----TTGGACTGAC 120
consensus_9237#2 TTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCGGTGTGTG 160
* * *** * ** * * *
consensus_9237#1 TCCTACTCGATCCAGCCGACGACGGTGAA-CACGATGACGATGGTGGAGAACTCGTTCAT 592
consensus_9237#4 TCCTACTCGATCCAGCCGACGACGGTGAA-CACGATGACGATGGTGGAGAACTCGTTCAT 208
consensus_9237#0 TCCTACTCGATCCAGCCGACGACGGTGAA-CACGATGACGATGGTGGAGAACTCGTTCAT 413
consensus_9237#3 TATCTATCCGGCTATGCGTAATCAGTAAGTCACTAGGAAGCCAGTCAAG--CCCACTAGT 178
consensus_9237#2 TAGTGTTTCGCTCGCTCGGAGAAGCTGAG-----GGGGCAAAGGTGGAC--TTTACACAC 213
* * ** * * * ** *
consensus_9237#1 CAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCAC 652
consensus_9237#4 CAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCAC 268
consensus_9237#0 CAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCAC 473
consensus_9237#3 --AGTACAGGCAGGCTTATGACCGAATACGCTTATTGTTGTTG---CCCGGAAGAAGAAA 233
consensus_9237#2 --AAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGG-TGCGCGACAGAGCT 270
* * * * * * ** * * *
consensus_9237#1 GGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCAT 712
consensus_9237#4 GGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCAT 328
consensus_9237#0 GGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCAT 533
consensus_9237#3 AGAAGAAGCAACTNTAAACTGATNAAGAAAAGTACAATCACTCGATTCCGATATACGCCT 293
consensus_9237#2 GCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGC 330
* * * * * * *
consensus_9237#1 GGTCGCCGACCCAGAGGAGTGCAATATGGAA---GAGCTGCTGA--TGCTGAAGGACATC 767
consensus_9237#4 GGTCGCCGACCCAGAGGAGTGCAATATGGAA---GAGCTGCTGA--TGCTGAAGGACATC 383
consensus_9237#0 GGTCGCCGACCCAGAGGAGTGCAATATGGAA---GAGCTGCTGA--TGCTGAAGGACATC 588
consensus_9237#3 A-TCGTCTATCCGAAANACGACGATCGTGACTGTAAACTATTGTATTTTTGTTNAACAAN 352
consensus_9237#2 AAT-GTTTGCCCCGCATACAGCAGCTGCTGCT--GGACCACCGT-----GGCAAGTTTCG 382
* * ** * * * * *
consensus_9237#1 GACAAATCGTTGGCCG-TGTTTTGCT-TAGCGACG--TACGGCG-AGGGCGACCCGACGG 822
consensus_9237#4 GACAAATCGTTGGCCG-TGTTTTGCT-TAGCGACG--TACGGCG-AGGGCGACCCGACGG 438
consensus_9237#0 GACAAATCGTTGGCCG-TGTTTTGCT-TAGCGACG--TACGGCG-AGGGCGACCCGACGG 643
consensus_9237#3 GTATCATTGTGCACCA-GGTTCTCTTGNAGCCACTGCTTCANTGGAAGACTAGTAGCTGG 411
consensus_9237#2 GAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAA-AACGTACGAGCACTACAACAAGG 441
* * * *** ** ** * * * * **
consensus_9237#1 ACAA---CTGCATGG---AGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCG 876
consensus_9237#4 ACAA---CTGCATGG---AGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCG 492
consensus_9237#0 ACAA---CTGCATGG---AGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCG 697
consensus_9237#3 ACAGT--CCGCATGAT--AGCATTACAA-TGGTTGTCGCATAAT-ATGTTACCGTGTTNT 465
consensus_9237#2 TCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCG 501
* * * ** ** * * * * ** * *
consensus_9237#1 GTTTGAATTACGCGGA---CTTTACATCAAGCCCGGCATG-----GGTTCAAGC-TTTGG 927
consensus_9237#4 GTTTGAATTACGCGGT---GTTTG-GCCTTGGCAACAAAA-----CGTACGAGC-ACTAC 542
consensus_9237#0 GTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGC-GATGC 756
consensus_9237#3 CTCAAACATGTATACAGCGCCCTATATCGGACGCCTCAGTATC--TGCANNATC-TNTGA 522
consensus_9237#2 GTCTGGGTGACGATGATGCCAACATCGAGGACTACTTCATCACGTGGAAGGAAAAGTTTT 561
* *
consensus_9237#1 ACGTGT-CTCCATACTTTGGACTGACTATCTATCC----GGCTATGCGTAATCAGTAAGT 982
consensus_9237#4 AACAAG-GTCGG------------------------------------------------ 553
consensus_9237#0 AAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACG 816
consensus_9237#3 AACGGC-GTATAATAGCTGTGAT-ATGGTTCATTC----AGCTAGNATTNAATCGTGGGT 576
consensus_9237#2 GGCCCACGGTTTGCGACTACTTCGGCATCGAGAGCAC-GGGCGAGGATGTGCTGATGCGG 620
consensus_9237#1 CACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTT- 1041
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 TACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTT 876
consensus_9237#3 TTCGAGCCTTTTT----------------------------------------------- 589
consensus_9237#2 CAGTACCGCCTGCTGGAGCAGCCGGACGTGAG---------------------------- 652
consensus_9237#1 ------------------------------------------------------------
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 TCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCCACTGGCC 936
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 ------------------------------------------------------------
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 TTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATT 996
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 ------------------------------------------------------------
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 GAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTA 1056
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 ------------------------------------------------------------
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 CTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACG 1116
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 ------------------------------------------------------------
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 TGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAA 1176
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 ------------------------------------------------------------
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 GCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTTGTTGTGCCC 1236
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 ------------------------------------------------------------
consensus_9237#4 ------------------------------------------------------------
consensus_9237#0 GGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATAT 1296
consensus_9237#3 ------------------------------------------------------------
consensus_9237#2 ------------------------------------------------------------
consensus_9237#1 --------------------
consensus_9237#4 --------------------
consensus_9237#0 ACGCTATCGTAACAGGGTAA 1316
consensus_9237#3 --------------------
consensus_9237#2 --------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||