|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1721 fasta sequence
[CCGAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACAAGCCGTCATGGCGCTACTGGTGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCTTCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGAGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT-GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC-GGGGCATTGTG-AGTGCGGC-GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGAGTCGACAAGGTGCCGCGCTACTTCTTGGGCGGCCTGATGGTGTTTAGCTTCCCGCACTGCCGGGCGGAGGGAAGCGAGATGTTTGTA]
[+] EMBL BM578490 [CCGAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACAAGCCGTCATGGCGCTACTGGTGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCTTCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGAGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATACTTCATCCAAAGTATGACCGGCACACCTTCAACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCTATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAGTGCA ]
[+] EMBL BM595355 [ ccgTATTAATTCAACAACCTTTTGAAGTTGCTGCTTCAACGTGTGGAGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGTGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCACACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGT ]
[+] EMBL BM607808 [ CCGCATGAAGTCTGCGAAACCAGAATACAAGTGTGGCGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGTATACACCATCTGAACAACGATAACGACACGAGCGTGATCGTTTACAACCTGTTCGAGATCATCCTCCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCTTTCTCCATCTTCCCGATCTGCTTATGGCCGTCGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCTGTTGGGTTTGGATTTGATGAGACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTCAATGAAGGTAATCGAGAAGCAGCAGTGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGAACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGTGGGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGCGGGGGCATTGTGAAGTGCGGCGGGCCCGGC ]
[+] EMBL BX624832 [ AACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAANAAGCCGGTGNTCAATCAGTACCCGTGGAATGCGCTG ]
[+] EMBL BX603630 [ GGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGG ]
[+] EMBL BX602686 [ AGACGCACCGTATCAGCTAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAG ]
[+] EMBL BX615350 [ CTCTATGAAGGTAATCGAGAAGCAGCTTTGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGTCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAAT ]
[+] EMBL BX622500 [ AGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAGCCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGANGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGAGTCGACAAGGTGCCGCGC ]
[+] EMBL BM629031 [ ccgCGCGATACGTCCTTGCGTTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGAAAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGAGTCGACAAGGTGCCGCGCTACTTCTTGGGCGGCCTGATGGTGTTTAGCTTCCCGCACTGCCGGGCGGAGGGAAGCGAGATGTTTGTA]
[+] EMBL BX621286 [ ACTACAACAAACCGCAGTATGNCAACAATCTCNCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAANCCGAACATTAAACCCATCTGTCTGCCAGCGGNCNACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGNTCATCTTTCCCAAGATGGAGCGCNACGNAATGAACCTCACTTCGNCGATAACCTGTCNCAATGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCNAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCNAGCGAGNCGAC ]
consensusID : consensus_9243#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 769 fasta sequence
[CCGGTGCAATCAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACGAGCCGTCATGGCGCTACTGGGGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCATGTAATTCTACACCGAAATAGGGAAGATTTTTTCTTAACATTAGTACCTGATGTACAATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTCTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTTGCACTGTTTGCCCACATGAAGTCTGCGAAACCAGAATACAAGTGTGGCGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAAACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTC]
[+] EMBL BM656283 [CCGGTGCAATCAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACGAGCCGTCATGGCGCTACTGGGGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCATGTAATTCTACACCGAAATAGGGAAGATTTTTTCTTAACATTAGTACCTGATGTACAATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTCTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTTGCACTGTTTGCCCACATGAAGTCTGCGAAACCAGAATACAAGTGTGGCGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGTATACACCATCTGAACAACGATAACGACACGAGCGTGATCGTTTACAACCTGTTCGAGATCATCCTCCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCTTTCTCCATCTTCCCGATCTGCTTATGGCCGTCGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCTGGTGGGTTTGGATTTGATGAAACGCACCGCATCAGCGAAACGCTTC ]
[+] EMBL BX602859 [ AATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGTGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCACACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTC]
[+] EMBL BX604864 [ AACCGAACCCCGATCACTATTTCCTGAAGGCTGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTG ]
consensusID : consensus_9243#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 555 fasta sequence
[CAGATCGCCCGACGGTGNATTCTAATACACCCGCGATACGTCCTTGCGGTGGNTGCACTGTGTAGAGGGAGTGTTCAGTAACGTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAGCCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGCATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGA]
[+] EMBL AL697004 [CAGATCGCCCGACGGTGNATTCTAATACACCCGCGATACGTCCTTGCGGTGGNTGCACTGTGTAGAGGGAGTGTTCAGTAACGTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAGCCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGCATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGA]
consensusID : consensus_9243#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence
[GCAGAATCGGCACTAGAGCGTCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGCGGCTGGAAGCGCAATAAGCTTGTCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGAGTAACCTGTCGCAGTGAGTACGAAAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACGTGTCACAACGTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGGGTCGACNAAGGTACCGACGCTACTTCTTGGCCGGGACCTGACTGGCTCGTTNCT]
[+] EMBL BX468310 [GCAGAATCGGCACTAGAGCGTCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGCGGCTGGAAGCGCAATAAGCTTGTCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGAGTAACCTGTCGCAGTGAGTACGAAAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACGTGTCACAACGTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGGGTCGACNAAGGTACCGACGCTACTTCTTGGCCGGGACCTGACTGGCTCGTTNCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 CCGAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGT 60
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 GTTGGGGAATACCCATACAAGCCGTCATGGCGCTACTGGTGCTGCTATTAATTCAACAAC 120
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 CTTCTGAAGTTGCTGCTTCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCA 180
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 CGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACA 240
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 TGAAGTCTGAGAAACCAGCATACAAGTGTGGAGGATCGATTATCAGTCAACACTTTGTGC 300
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 TTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCA 360
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 TACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCA 420
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 TCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTG 480
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 ATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACA 540
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 ACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATG 600
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 AGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGC 660
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 AATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGT 720
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 GTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGTGGCGGTGGGTTGT 780
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 ACTTCGCAAAGGATCAGGTTTGGTACCTGCGGGGCATTGTGAGTGCGGCGGCTCGGCGTG 840
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 ATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGG 900
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 CGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCA 960
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 AGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGG 1020
consensus_9243#1 ------------------------------------------------------------
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 TGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGA 1080
consensus_9243#1 -----------------------------------------------------CCGGTGC 7
consensus_9243#2 --CAGATCGCCCGACGGTGNATTCTAATACACCCGCGATACGTCCTTGCGGTGGNTGCAC 58
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 CACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGG-GCAC 1139
consensus_9243#1 AATCAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAG 67
consensus_9243#2 TGTGTAGAGGGAGTGTTCAGTAACGTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAA 118
consensus_9243#3 ------------------------GCAGAATCGGCACTAGAG-CGTCTTGGGGAGTACAA 35
consensus_9243#0 TGTGTAGAGGGAGTGTTCAGTAAC-TATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAA 1198
consensus_9243#1 TGTTGGGGAATACCCATACGAGCCGTCATGGCGCTACTGGGGCTGCTATTAATTCAACAA 127
* * * * * * ****
consensus_9243#2 CATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATC 178
consensus_9243#3 CATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATC 95
consensus_9243#0 CATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATC 1258
consensus_9243#1 CCTTCTGAAGTTGCTGCATGTAATTCT--ACACCGAAATAGGGAAGATTTTTTCTTAACA 185
* * * * ** * * ** ** * * *** ** **
consensus_9243#2 GGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAAC---CGCAGTATGCCAA 235
consensus_9243#3 GGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAAC---CGCAGTATGCCAA 152
consensus_9243#0 GGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAAC---CGCAGTATGCCAA 1315
consensus_9243#1 TTAGTACCTGATGTACA-ATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTCTCCC 244
* ** * * * * ** ** * * ** * ** ** * *
consensus_9243#2 CAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAG--CAAACCGAACATTAAG 293
consensus_9243#3 CAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAG--CAAACCGAACATTAAA 210
consensus_9243#0 CAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAG--CAAACCGAACATTAAA 1373
consensus_9243#1 CAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTTG 304
**** *** * * * * * ** * * ** * *** * ***
consensus_9243#2 C-CCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTG 352
consensus_9243#3 C-CCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGCGGCTG 269
consensus_9243#0 C-CCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTG 1432
consensus_9243#1 CACTGTTTGCCCACATGAAGTCTGCGAA-ACCAGAATACAAGTGTGGCGG--ATCGATTA 361
* * * ** * * * *** *** ** ** * ** ** *** * * *
consensus_9243#2 GAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTC 412
consensus_9243#3 GAAGCGCAATAAGCTTGTCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTC 329
consensus_9243#0 GAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTC 1492
consensus_9243#1 TCAGT-CAACAC-TTTGTGCTTTCCGCTGCTCACTGTATA--AAGGAACCGAACCCCGAT 417
** *** * * * ** ** * * ** ***** ** **
consensus_9243#2 GA-TAACCTGTCGCAGTGAGTACG-ACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGC- 469
consensus_9243#3 GAGTAACCTGTCGCAGTGAGTACG-AAAAACTTGGCGTCGTTCTGCCTCCCACCGAGG-- 386
consensus_9243#0 GA-TAACCTGTCGCAGTGAGTACG-ACAAACTTGGCGTCGTTCTGCCTCCCACCGAGG-- 1548
consensus_9243#1 CACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTC 477
* ** * * * * * * ** * ** * * * ** **
consensus_9243#2 ATGTGCTGTGTGCG-GTGTACAAGACACGTCCGAAGGGTCAC-TGTCACAAC---TACGC 524
consensus_9243#3 ATGTGCTGTGTGCG-GTGTACAAGACACGTCCGAAGGGTCACGTGTCACAACG--TACGC 443
consensus_9243#0 ATGTGCTGTGTGCG-GTGTACAAGACACGTCCGAAGGGTCAC-TGTCACAAC---TACGC 1603
consensus_9243#1 GTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGAC-CGGCACACCTTCTACAA 536
* * * ** * * ** * *** *** * ** * **** * ***
consensus_9243#2 CACCGGCTCGCCGCTGCAGTAC-ATCAAGCGA---------------------------- 555
consensus_9243#3 CACCGGCTCGCCGCTGCAGTAC-ATCAAGCGGGTCGACNAAGGTACCGACGCTACTTCTT 502
consensus_9243#0 CACCGGCTCGCCGCTGCAGTAC-ATCAAGCGAGTCGACAA-GGTGCCG-CGCTACTTCTT 1660
consensus_9243#1 CGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCC 596
* * * * * *** *** ****
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 GGCCGGGACCTGACTGGCTCGTTNCT---------------------------------- 528
consensus_9243#0 GGGCGGCCTGATGGTGTTTAGCTTCCCGCACTGCCGGGCGGAGGGAAGCGAGATGTTTGT 1720
consensus_9243#1 GATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCAT 656
consensus_9243#2 ------------------------------------------------------------
consensus_9243#3 ------------------------------------------------------------
consensus_9243#0 A----------------------------------------------------------- 1721
consensus_9243#1 AGCCGTTGGGTTTGGATTTGATGAAACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTC 716
consensus_9243#2 -----------------------------------------------------
consensus_9243#3 -----------------------------------------------------
consensus_9243#0 -----------------------------------------------------
consensus_9243#1 TATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTC 769
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||