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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9252#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1246 fasta sequence
[ACTGGGTGTTAAACGCATTTCGGCAAGCGGCAAATGTAAATAAATTTCGCTCTCGTTGAAGCGTGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAA-CTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGC-CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAAGCGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGAGCTGGTGTTTAATCTGTGCAACA-ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCTGAAGCTGAGCAAGGACGAGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGAACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACC-GGTCGCCAAGCATACACACTTCTCGT-CCGGCATTGCGACCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAGCCGCAAGGCTTTGAAACGGATGGACC-GGCGCCGCCCTCGCTGGAGGAGGTGATCAACAACGGCTACATCAGGCACATACGAGTTGAAAATTTGGCAGAGAAAGCGGGAGGATTCCAAACGAACATTTCCTGCCTGCGAGCTATTCAGGAAGCGTTGGCCGGATTATATCACGGTTAGTTTGGAGGTTGAATAGGATTAGCTAGAGGTAAACAAGAATAAATTTACACCATTTTTTAACATGCAAAAAAA]
[+] EMBL CNS08Z6A [ACTGGGTGTTAAACGCATTTCGGCAAGCGGCAAATGTAAATAAATTTCGCTCTCGTTGAAGCGTGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAA GTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGC CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAAGCGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGAGCTGGTGTTTAATCTGTGC ACA ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCCGAAGCTGAGCAAGGACGAGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGAACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCAGGGTCAGCACG ]
[+] EMBL CNS08E4H [ ttgtttGCATTTCGGCAAGCGGCAAATGTAAATAAATTTCGCTCTCGTTGAAGCGTGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAGCAGTACCTTCCTGTGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAA CTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGC CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAAACGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGAGCTGGTGTTTAATCTGTGCAACA ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCTGAAGCTGAGCAAGGACGAGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGAACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAGCCGCAAGGTTTTGAAACGGATGG ]
[+] EMBL CNS08D3V [ TCTCGTTGAAGCGTGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAA CTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGC CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGGGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAAGCGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGAGCTGATATAAAATCTGTGC ACAGACATCG ]
[+] EMBL CNS08FU6 [ TGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGCGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAA CTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGC CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAAGCGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGAGCTGGTGTTTAATCTGTGCAACA ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCTGAAGCTGAGCAAGGACGAGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGAACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAGCCGCAAGGTTTTGAAACGGATGGACC GGCGCC ]
[+] EMBL BX624779 [ CCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAAGCTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGC CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAAGCGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGAGCTGGTGTTTAATCTGTGCAACA ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCTGAAGCTGAGCAAGGACGAGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGANGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGAACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACCGGGTCGCCAAGCATACACACTTCTCGTNCCGGCA ]
[-] EMBL CNS08E4I [ AAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAAGCTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGC CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGAACTCGAACGTCGACAAGGAGGTGCAGATACGCAAACGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGGGCTGGTGTTTAATCTGTGCAACA ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCTGAAGCTGAGCAAGGACGAGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGGGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGAACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAGCCGCAAGGCTTTGAAACGGATGGACC GGCGCCGCCCTCGCTGGAGGAGGTGATCAACAACGGCTACACCAGGCACATACGAGTTGAAAATTTGGCAGAGAAAGCGGGAGGATTCCAAACGAACATTTCCTGCCTGCGAGCTATTCAGGAAGCGTTGGCCGGATTTTATCACGGTTAGTTTGGAGGTTGAATAGGATTAGCTAGAGGTAAACAAGAATAAATTTACACCATT ]
[-] EMBL CNS08FU7 [ GCCACACGCTGTGCGAAAGCTGCGTCGGGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAGTGTGGC CCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGAACTCGAACGTCGACAAGGAGGTGCAGATACGCAAGCGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTGTCTGGAGATGATCGAGGGGGTGGTGTTTAATCTGTGCAACA ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGGTCATGAAGAACAAGCTGAAGGTGAGCAAGGACGAGGTGGAGGTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGGTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGGACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAGCCGCAAGGCTTTGAAACGGATGGACC GGCGCCGCCCTCGCTGGAGGAGGTGATCAACAACGGCTACATCAGGCACATACGAGTTGAAAATTTGGCAGAGAAAGCGGGAGGATTCCAAACGAACATTTCCTGCCTGCGAGCTATTCAGGAAGCGTTGGCCGGATTATATCACGGTTAGTTTGGAGGTTGAATAGGATTAGCTAGAGGTAAACAAGAA ]
[+] EMBL CNS08PZ4 [ TGCTGTTTCTCAAAGGGTTCGGCTCCTGTCCGGAGTGCAATGTGGCTCCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAAACGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGAGGAGCTGGTGTTTAATCTGTGCAACA ACATCGACATCATCAACACGAACAAGCGCATTGAGCAGT CAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCTGAAGCTGAGCAAGGACGAACTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGCTGGCGATGATTGA ]
[-] EMBL CNS08Z6B [ TGGC CCTGCGCCGGGGCCACTTCCGCGTGCAGCTGTTCGAGAACTCGAACGTCGACAAGGAGGTGGAGATACGCAAGCGCATCCTGAAGGATTTCAACAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTTTCTGGAGATGATCGAGGGGCTGGTGTTTAATCTGTGCAACA ACATCCACATCATCAACACGGACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGATCATGAAGAACAAGCCGAAGCTGAGCAAGGACGGGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGGGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGGACAGTCCCAGATACGGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAGCCGCAAGGCTTTGAAACGGATGGACCGGGCGCCGCCCTCGCTGGAGGAGGTGATCAACAACGGCTACCTCAGGCACATACGAGTTGAAAATTTGGCAGAGAAAGCGGGAGGATTCCAAACGAACATTTCCTGCCTGCGAGCTATTCAGGAAGCGTTGGCCGGATTATATCACGGTTAGTTTGGAGGTTGAATAGGATTAGCTAGAGGTAAACAAGAATAAATTTACACCATTTTTTAACATGCAAAAAAA]
[-] EMBL CNS08D3W [ GAGCTGGAGCTGGAGCAGATCGTGGAGTACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGGGCTGGCGATGATTGAGGCGGAAAACCGGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGGATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGGACAGTCCCAGATACAGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCGGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAGCCGCAAGGCTTTGAAACGGATGGACC GGCGCCGCCCTCGCTGGAGGAGGTGATCAACAACGGCTACATCAGGCACATACGAGTTGAAAATTTGGCAGAGAAAGCGGGAGGATTCCAAACGAACATTTCCTGCCTGCGAGCTATTCAGGAAGCGTTGGCCGGATTATATCACGGTTAGTTTGGAGGTTGAATAGGATTAGCTAGAGGTAAACAAGAATAAATTTACAC ]
[-] EMBL CNS08PZ5 [ CAGCTGCCGAAACCGGTCGCACCGCCACC GGTCGCCAAGCATACACACTTCTCGT CCGGCATTGCGACCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGTACGTGTACGAACCGCAAGGCTTTGAAACGGATGGACC GGCGCCGCCCTCGCTGGAGGAGGTGATCAACAACGGCTACATCAGGCACATACGACTTGAAAATTTGGCAGAGAAAGCGGGAGGATTCCAAACGAACATTTCCTGCCTGCGAGCTATTCAGGAAGCGTTGGCCGGATTATATCACGGTTAGTTTGGAGGTTGAATAGGATTAGCTAGAGGTAAACAAGAATAAA ]
consensusID : consensus_9252#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 584 fasta sequence
[ATCGCCACGAGGTTCAGCAGCGGCAATGTAAATAAATTTCGCTCTCGTTGAAGCGTGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAAGCTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGCCCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAA-GCGCATCCTGAAGGATTTCAAGCAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGGAGGAGCTGGTGTTTAATCTGTGCAACAACATCGACATCATCAACACGAACAAN]
[+] EMBL BX466249 [ATCGCCACGAGGTTCAGCAGCGGCAATGTAAATAAATTTCGCTCTCGTTGAAGCGTGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAAGCTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGCCCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAA GCGCATCCTGAAGGATTTCAAGCAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATCGGAGGAGCTGGTGTTTAAT ]
[+] EMBL AL935007 [ TCGGC CGAGG TCTNCAGCGGCAATGTAAATAAATTTCGCTCTCGTTGAAGCGTGCTCGTAATTGGCTAATTTTCATTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTG TCGTGTAAAAATAGTTTTTAGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGATCGCGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAAGCTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGCAATGTGGCCCTGCGCCGGAGCAACTTCCGCGTGCAGCTGTTCGAGGACTCGAACGTCGACAAGGAGGTGCAGATACGCAACGCGCATCCTGAAGGATTTCAA CAAAAAGGAGGACGACTTCGGCTCGCTGGACGAGTACAACGACTATCTGGAGATGATC GAGGAGCTGGTGTTTAATCTGTGCAACAACATCGACATCATCAACACGAACAAN]
[+] EMBL CNS09MZI [ CGTGATCCACCGAACCTCAACCAAAAAAAATCCAACCATCATGGATGATCAGGTCTGTCCGCGATGCAAAACCACCAAATACCGCAACCCGTCGCTCAAGCTGATGGTGAACGTGTGCGGCCACACGCTGTGCGAAAGCTGCGTCGAGCTGCTGTTTCTCAAAGGGTCCGGCTCCTGTCCGGAGTGC ]
consensusID : consensus_9252#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence
[GCAGAATCGGCCCGAGGCTGTAAAAGCGTGCTCGTAATTGGCTAACTTTTCACGTTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGCATCGCGTGATCCACCGAACCTCAACCAAGAAAGANAATCCAAACCATCATGGATGATCCAGGGTCTGTCCGCGGAGTGCANTAACCAGCCAAATACCGGCGAACCCGGTCGCGTCAAGCTGATGTGTGGAACGTGTGCGGGCACACGGCTGGTGCCGAAAACGCTGNCGTCNGAGCTTGCTTGGTTGTNCTCAAANGGGGTCCCGGGTCCATGGTACCGGGAGGTGGCAAATGGTTGGCCCCTGCGTCCCGTGGAGGCAAAGCCTTTCCCGGACGGTGGCAGAGCGTTGTTNCCGAAGGGAGCTTCNGGAGAACCGGNCAGACAACGGGGACGGGTCGCGAGGGAATAACCGGCGACAAGGCCGCCATCACGTGGAAAAGGGAGTTNTCCAAGCACAAGAGAAANAGGACGAGGAACNCNG]
[+] EMBL BX469321 [GCAGAATCGGCCCGAGGCTGTAAAAGCGTGCTCGTAATTGGCTAACTTTTCACGTTAGTATTTCAAGTCTTGGTTGTTGTACGAACAGTTGTTCGTGTAAAAATAGTTTTTAGGAAGCGGAAAAGCAATACAAACAGTACCTTCCTGTGAAATCGCATCGCGTGATCCACCGAACCTCAACCAAGAAAGANAATCCAAACCATCATGGATGATCCAGGGTCTGTCCGCGGAGTGCANTAACCAGCCAAATACCGGCGAACCCGGTCGCGTCAAGCTGATGTGTGGAACGTGTGCGGGCACACGGCTGGTGCCGAAAACGCTGNCGTCNGAGCTTGCTTGGTTGTNCTCAAANGGGGTCCCGGGTCCATGGTACCGGGAGGTGGCAAATGGTTGGCCCCTGCGTCCCGTGGAGGCAAAGCCTTTCCCGGACGGTGGCAGAGCGTTGTTNCCGAAGGGAGCTTCNGGAGAACCGGNCAGACAACGGGGACGGGTCGCGAGGGAATAACCGGCGACAAGGCCGCCATCACGTGGAAAAGGGAGTTNTCCAAGCACAAGAGAAANAGGACGAGGAACNCNG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9252#0 ACTGGGTGTTAAACGCATTTCGGCAAGCGGCAAATGTAAATAAATTTCGCTCTCGTTGAA 60
consensus_9252#1 ----ATCGCCA--CGAGGTTCAGCA-GCGGCAA-TGTAAATAAATTTCGCTCTCGTTGAA 52
consensus_9252#2 -----------------------------------GCAGAATCGGCCCGAGGCTGTAAAA 25
* * * ** ** **
consensus_9252#0 GCGTGCTCGTAATTGGCTAATTTT---CATTAGTATTTCAAGTCTTGGTTGTTGTACGAA 117
consensus_9252#1 GCGTGCTCGTAATTGGCTAATTTT---CATTAGTATTTCAAGTCTTGGTTGTTGTACGAA 109
consensus_9252#2 GCGTGCTCGTAATTGGCTAACTTTTCACGTTAGTATTTCAAGTCTTGGTTGTTGTACGAA 85
******************** *** * *******************************
consensus_9252#0 CAGTTGTTCGTGTAAAAATAGTTTTTAG-AAGCGGAAAAGCAATACAAACAGTACCTTCC 176
consensus_9252#1 CAGTTGTTCGTGTAAAAATAGTTTTTAG-AAGCGGAAAAGCAATACAAACAGTACCTTCC 168
consensus_9252#2 CAGTTGTTCGTGTAAAAATAGTTTTTAGGAAGCGGAAAAGCAATACAAACAGTACCTTCC 145
**************************** *******************************
consensus_9252#0 TGTGAAATCG-ATCGCGTGATCCACCGAACCTCAACCAAAAAAAAT----CCAACCATCA 231
consensus_9252#1 TGTGAAATCG-ATCGCGTGATCCACCGAACCTCAACCAAAAAAAAT----CCAACCATCA 223
consensus_9252#2 TGTGAAATCGCATCGCGTGATCCACCGAACCTCAACCAAGAAAGANAATCCAAACCATCA 205
********** **************************** *** * * ********
consensus_9252#0 TGGATGATC--AGGTCTGTCCGCGA--TGCAA-AACCA-CCAAATACCGC--AACCCG-T 282
consensus_9252#1 TGGATGATC--AGGTCTGTCCGCGA--TGCAA-AACCA-CCAAATACCGC--AACCCG-T 274
consensus_9252#2 TGGATGATCCAGGGTCTGTCCGCGGAGTGCANTAACCAGCCAAATACCGGCGAACCCGGT 265
********* ************ **** ***** ********** ****** *
consensus_9252#0 CGC-TCAAGCTGATG-GTG-AACGTGTGCGGCCACACGCT--GTGCGAAA-CTGCGTCGA 336
consensus_9252#1 CGC-TCAAGCTGATG-GTG-AACGTGTGCGGCCACACGCT--GTGCGAAAGCTGCGTCGA 329
consensus_9252#2 CGCGTCAAGCTGATGTGTGGAACGTGTGCGGGCACACGGCTGGTGCCGAAAACGCTGNCG 325
*** *********** *** *********** ****** **** ** **
consensus_9252#0 GCTGCTGTTTCTCAAAGGGTC-CGGCTCCTGTCCGGAGTGCAATGTGGCCCTGCGCCGGA 395
consensus_9252#1 GCTGCTGTTTCTCAAAGGGTC-CGGCTCCTGTCCGGAGTGCAATGTGGCCCTGCGCCGGA 388
consensus_9252#2 TCNGAGCTTGCTTGGTTGTNCTCAAANGGGGTCCCGGGTCCA---TGGTACCGGGAGGTG 382
* * ** ** * * * **** * ** ** *** * * * *
consensus_9252#0 GCAACTT-CCGCGTGCAGCTGTTCGAGGACTCGAA-CGTCGACAAGGAGGTGCAGATACG 453
consensus_9252#1 GCAACTT-CCGCGTGCAGCTGTTCGAGGACTCGAA-CGTCGACAAGGAGGTGCAGATACG 446
consensus_9252#2 GCAAATGGTTGGCCCCTGCGTCCCGTGGAGGCAAAGCCTTTCCCGGACGGTGGCAGAGCG 442
**** * * * ** ** *** * ** * * * * **** **
consensus_9252#0 CAAGCGCATCCTGAAGGATTTCAA-CAAAA--AGGAGGACGACTTCGGCTCGCTGGACGA 510
consensus_9252#1 CAAGCGCATCCTGAAGGATTTCAAGCAAAA--AGGAGGACGACTTCGGCTCGCTGGACGA 504
consensus_9252#2 T---TGTTNCCGAAGGGAGCTTCNGGAGAACCGGNCAGACAACGGGGACGGGTCGCGAGG 499
* ** * *** * * ** * *** ** * * * * *
consensus_9252#0 GTACAAC-GACTATCTGGAGATGATC--G-AGGAGCTGGTGTTTAATCTGTGCAACAACA 566
consensus_9252#1 GTACAAC-GACTATCTGGAGATGATC--GGAGGAGCTGGTGTTTAATCTGTGCAACAACA 561
consensus_9252#2 GAATAACCGGCGACAAGGCCGCCATCACGTGGAAAAGGGAGTTNTCCAAGCACAAGAGAA 559
* * *** * * * ** *** * * * ** *** * *** * *
consensus_9252#0 TCGACATCATCAACACGAACAAGCGCATTGAGCAGTACAAGCGGGACAACCGGGACGTGA 626
consensus_9252#1 TCGACATCATCAACACGAACAAN------------------------------------- 584
consensus_9252#2 ANAGGACGAGGAACNCNG------------------------------------------ 577
* * *** *
consensus_9252#0 TCATGAAGAACAAGCTGAAGCTGAGCAAGGACGAGCTGGAGCTGGAGCAGATCGTGGAGT 686
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 ACGAGAAGGAGCAGTTCGACCAGCGGCGGAAGGAGCTGGCGATGATTGAGGCGGAAAACC 746
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 GGAAGCAGAAGACGAAAAACAAGGAAGAGCTGATCGATTCGCTGATGGCAAGCTACGAGG 806
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 ATGCGAGCGCGATCGTGGACAAGTTCACGCAGAAGGCGGAACAGTCCCAGATACAGCTGC 866
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 CGAAACCGGTCGCACCGCCACCGGTCGCCAAGCATACACACTTCTCGTCCGGCATTGCGA 926
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 CCGGTTTCCAGGGTCAGCACGGTTTCCTGGCCGTGCCGAAGCTGGAGGAGGGCCCGCTGT 986
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 ACGTGTACGAGCCGCAAGGCTTTGAAACGGATGGACCGGCGCCGCCCTCGCTGGAGGAGG 1046
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 TGATCAACAACGGCTACATCAGGCACATACGAGTTGAAAATTTGGCAGAGAAAGCGGGAG 1106
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 GATTCCAAACGAACATTTCCTGCCTGCGAGCTATTCAGGAAGCGTTGGCCGGATTATATC 1166
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 ACGGTTAGTTTGGAGGTTGAATAGGATTAGCTAGAGGTAAACAAGAATAAATTTACACCA 1226
consensus_9252#1 ------------------------------------------------------------
consensus_9252#2 ------------------------------------------------------------
consensus_9252#0 TTTTTTAACATGCAAAAAAA 1246
consensus_9252#1 --------------------
consensus_9252#2 --------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||