|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9254#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1089 fasta sequence
[TCTTAGCAGATTCCCCGCGGTATATCGGCGAAAGCGGAGTTGGAAAATCTAGTCTTATCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACGTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGTACTACCGGGAACGCGCCAGGGGGCCCATCCTCGTGTACGACGTTACCAAGCCGGGAAGACGTTCCATAAGCTCGAGTCGTAGGCATGACACGAGCTGGGCAAATTTACGGGCGACTGCGCACACAACCATGGGGCCAAAGNTTGGTTGGTTGGGGCAAACAAAGATTCGGAACAACCCGAACACAGGGGGCCCCATCCGGTGGAGANGGGGCAGGACAGGGGGGTTTCACCCGGGTTTTCCGGGAAAGAAAAGGCACCGGCGATTGATTGTTTCAGTCGGAAAAACGGTTCCAGATGGAAAGAAACCNGAAGCNGNAGGGNGCCGTGCACAGGGCACGGCNATTTACGAAGGGGAAGGGTGGGTNGCCGGCCACCACGAACTTTANATTGGGACAGACCGGAGGAACGGGANACCATGGTGGTGTGAAAAACCGTGAAAAACAGAACATAACNCTGTGACAAGCACTACGATTGAGCGGNATACAGAAATTCTTTGCAGCCAGGTGGGCAAAATTCAGNGTNCAGTGTCATTGTNATCCGGGCCCGAGCTAACCGCGTCAGGNTACACTATCATGGNTAANAAGGCAATNCCCCCNGGNATTAATCGGGCATTGGCCATTGCANNTATACCCGATNGCAAAAAGCGCCACAATTANCCACANGCCCACAAATATTATCCATAATGATATCCGTACAACCCGGCAATCNNATGACTTNCTTTCCAACTGCACAGCAATTTACAAGTTGGGTACCCAATTATAAAACAGGATANAAAGAAGAGGTATACATCAGTTAGAGGTTAAAAAGATTNGAAACCGTTGTATCATATAAAACNACGTAGGCATCCCATTGGTANATAATAACGGGATAACAACNAA]
[+] EMBL AL696504 [TCTTAGCAGATTCCCCGCGGTATATCGGCGAAAGCGGAGTTGGAAAATCTAGTCTTATCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACGTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGTACTACCGGGAACGCGCCAGGGGGCCCATCCTCGTGTACGACGTTACCAAGCCGGGAAGACGTTCCATAAGCTCGAGTCGTAGGCATGACACGAGCTGGGCAAATTTACGGGCGACTGCGCACACAACCATGGGGCCAAAGNTTGGTTGGTTGGGGCAAACAAAGATTCGGAACAACCCGAACACAGGGGGCCCCATCCGGTGGAGANGGGGCAGGACAGGGGGGTTTCACCCGGGTTTTCCGGGAAAGAAAAGGCACCGGCGATTGATTGTTTCAGTCGGAAAAACGGTTCCAGATGGAAAGAAACCNGAAGCNGNAGGGNGCCGTGCACAGGGCACGGCNATTTACGAAGGGGAAGGGTGGGTNGCCGGCCACCACGAACTTTANATTGGGACAGACCGGAGGAACGGGANACCATGGTGGTGTGAAAAACCGTGAAAAACAGAACATAACNCTGTGACAAGCACTACGATTGAGCGGNATACAGAAATTCTTTGCAGCCAGGTGGGCAAAATTCAGNGTNCAGTGTCATTGTNATCCGGGCCCGAGCTAACCGCGTCAGGNTACACTATCATGGNTAANAAGGCAATNCCCCCNGGNATTAATCGGGCATTGGCCATTGCANNTATACCCGATNGCAAAAAGCGCCACAATTANCCACANGCCCACAAATATTATCCATAATGATATCCGTACAACCCGGCAATCNNATGACTTNCTTTCCAACTGCACAGCAATTTACAAGTTGGGTACCCAATTATAAAACAGGATANAAAGAAGAGGTATACATCAGTTAGAGGTTAAAAAGATTNGAAACCGTTGTATCATATAAAACNACGTAGGCATCCCATTGGTANATAATAACGGGATAACAACNAA]
consensusID : consensus_9254#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 915 fasta sequence
[ATACGTTCGACAAAAGG-G-AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA-GATATTAATAATCGGCGAAAGCGGAGTT-GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTTCCCGCTATCGCTGCCATGCTTTCGTG-AAACCCCCTCCCCCCCATTTTCCTATGCTCG]
[+] EMBL CNS09MXE [ATACGTTCTACAAAAGG G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAAATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTTCCCGCTATCGCTGCCATGCTTTCGTG AAACCCCCTCCCC ]
[+] EMBL AL929772 [ agaTCGCCAGCAGGTGAAAGGC AGCACGCAGAAAAACACGGAACTACACGGTCTAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAG CCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAATGATATTAATAATCGGCGAAAGCGGAGTTNGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCAT ]
[+] EMBL BM593064 [ cCGACAAAAGG G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGT ]
[+] EMBL CNS093E6 [ G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGT ]
[+] EMBL BM600250 [ cc G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGAACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATC ]
[+] EMBL BX603882 [ AGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAAC ]
[+] EMBL BX628648 [ GACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAGTTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCTATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGANGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGGAACGACTACNGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCG ]
[+] EMBL BX623689 [ TACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGCACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTCACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCGATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACAGACGGACTGTGGGAACGGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCGGGAGCGGCCGGTTCGTGTTCTTGNTAGCTTCCCGCTATTGCTGNC TGCTTTCGTGCAAACCCCCCCCCCCCCATTTTCCTATGCTCG]
consensusID : consensus_9254#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 878 fasta sequence
[CAGAATCGCGCNGAGGTTANATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAAACAACATGGCCAAGATGGTGGTGGGCAACAAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATT-CGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACG-GAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTT-CCCGCTATCGCTGCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAGTTAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTATAGGTAAAATATTTTTAGCACATATTTAATCGCCCAGCCTCCCCTCTCC-CACAGCGCGAGTGTGTGTGTTTTTGGAGAGGGGGTAGCGGATAAGGATGTAAAACACTAGGTGGAAATAAAAAGAAAAAAAACCGTTAAGATCACCTAA]
[+] EMBL AL697158 [CAGAATCGCGCNGAGGTTANATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAAACAACATGGCCAAGATGGTGGTGGGCAACAAAGA ]
[+] EMBL BX618569 [ GCTGAACGAGCTGGAAATTTACGGCACGCGC AACAACATGGCCAAGATGGTGGTGGGCAAC AAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATT CGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACG GAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTT CCCGCTATCGCTGCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTC ]
[-] EMBL CNS09MXF [ ACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGCGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGAAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTTCCCCGCTATCGCTGCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAGTTAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTATAGGTAAAATATTTTTAGCACATATTTAATCGCCCAGCCTCCCCTCTCC CACAGCGCGAGTGTGTGTGTTTTTGGAGAGGGGGTAGCGGATAAGGATGTAAAACACTAGGTGGAAATAAAAAGAAAAAAAACCGTTAAGATCACCTAA]
[+] EMBL BX614723 [ CGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGGGTTCTTGTTAGCTT CCCGCTATCGCTGCCATGCTTTCGGGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAAGGCAACATTAACTGGTACCATTTAAACAGTTAATAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTT ]
[-] EMBL CNS093E7 [ GCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAGTTAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTATAGGTAAAATATTTTTAGCACATATTTAATCACCCAGCCTCCCCTCTCCGCACAGCGCG ]
consensusID : consensus_9254#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 720 fasta sequence
[ATTGCCCTGAGGTTTGAGTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGTGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCTGCACCCTGACTGCCCAGCTACTACCGGGACTGCTGCAGGGTGTGCCATCCTCGTGTACGACTGTTACCAAGCCTGGACACTGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGACTGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCTGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCTGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGANAGGACGCATTCGAGGAGGTGGTGCGCAAGATTTATGGAAACGGACGGACTGTGGGAACGGAACGATACGGCCGATTGGGTGGGGTCGATCTGCACGGCATCGGGCGGCTGGAGCGGCCGGGTTCGTGTTCNTNGTTAGCTTTCCCCGCGTATCGCGTGNCATGCTTTACGTGCAAAACCCACCTCCNCCCCCCCATATATCCTAATGTTACCGTCAACCGGCACTTCAATGACTNATTCNAATGCAACATCATTAACTGGTTACCAATT]
[+] EMBL AL932023 [ATTGCCCTGAGGTTTGAGTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGTGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCTGCACCCTGACTGCCCAGCTACTACCGGGACTGCTGCAGGGTGTGCCATCCTCGTGTACGACTGTTACCAAGCCTGGACACTGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGACTGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCTGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCTGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGANAGGACGCATTCGAGGAGGTGGTGCGCAAGATTTATGGAAACGGACGGACTGTGGGAACGGAACGATACGGCCGATTGGGTGGGGTCGATCTGCACGGCATCGGGCGGCTGGAGCGGCCGGGTTCGTGTTCNTNGTTAGCTTTCCCCGCGTATCGCGTGNCATGCTTTACGTGCAAAACCCACCTCCNCCCCCCCATATATCCTAATGTTACCGTCAACCGGCACTTCAATGACTNATTCNAATGCAACATCATTAACTGGTTACCAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9254#2 ------------------------------------------------------------
consensus_9254#3 ------------------------------------------------------------
consensus_9254#1 ATACGTTCGACAAAAGGGAAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAA 60
consensus_9254#0 ------------------------------------------------------------
consensus_9254#2 ------------------------------------------------------------
consensus_9254#3 ------------------------------------------------------------
consensus_9254#1 ACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTT 120
consensus_9254#0 ------------------------------------------------------------
consensus_9254#2 ------------------------------------------------------------
consensus_9254#3 ------------------------------------------------------------
consensus_9254#1 ATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTC 180
consensus_9254#0 ------------------------------------------------------------
consensus_9254#2 ------------------------------------------------------------
consensus_9254#3 ------------------------------------------------------------
consensus_9254#1 CCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATC 240
consensus_9254#0 ------------------------------------------------------------
consensus_9254#2 --------------------------------------------------------CAGA 4
consensus_9254#3 -------------------------------------------ATTGCCCTGAGGTTTGA 17
consensus_9254#1 ATCATGGATCCGGATCGCATTCTGGCAACGTTCAAGATATTAATAATCGGCGAAAGCGGA 300
consensus_9254#0 ----------------------TCTTAGCAGATTCCCCGCGGTATATCGGCGAAAGCGGA 38
**
consensus_9254#2 ATCGCGCNGA--GGTTANATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 62
consensus_9254#3 GTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 77
consensus_9254#1 GTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 360
consensus_9254#0 GTTGGAAAATCTAGTCTTAT-CTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 97
* * ** ** ***************************************
consensus_9254#2 CTCACGATCGGGGTCGAC-TTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAG-GTGA 120
consensus_9254#3 CTCACGATCGGGGTCGAC-TTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGTGTGA 136
consensus_9254#1 CTCACGATCGGGGTCGAC-TTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAG-GTGA 418
consensus_9254#0 CTCACGATCGGGGTCGACGTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAG-GTGA 156
****************** ************************************ ****
consensus_9254#2 AGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTC-GCACCCTGAC-GCCCAGCTA 178
consensus_9254#3 AGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCTGCACCCTGACTGCCCAGCTA 196
consensus_9254#1 AGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTC-GCACCCTGAC-GCCCAGCTA 476
consensus_9254#0 AGCTGGCGATCTGGGACACGGC-GGCCAGGAGCGGTTTC-GCACCCTGAC-GCCCAG-TA 212
********************** **************** ********** ****** **
consensus_9254#2 CTACCGGGAC----GCGCAGGGGGCCATCCTCGTGTACGAC-GTTACCAAGCC-GGACAC 232
consensus_9254#3 CTACCGGGACTGCTGCAGGGTGTGCCATCCTCGTGTACGACTGTTACCAAGCCTGGACAC 256
consensus_9254#1 CTACCGGGAC----GCGCAGGGGGCCATCCTCGTGTACGAC-GTTACCAAGCC-GGACAC 530
consensus_9254#0 CTACCGGGAACGC-GCCAGGGGGCCCATCCTCGTGTACGAC-GTTACCAAGCCGGGAAGA 270
********* ** * * ***************** *********** ***
consensus_9254#2 -GTTCCAGAAGCTCGAGTCGTGGC--TGA-ACGAGCTGG--AAATTTACGG---CACGCG 283
consensus_9254#3 TGTTCCAGAAGCTCGAGTCGTGGC--TGA-ACGAGCTGG--AAATTTACGG---ACTGCG 308
consensus_9254#1 -GTTCCAGAAGCTCGAGTCGTGGC--TGA-ACGAGCTGG--AAATTTACGG---CACGCG 581
consensus_9254#0 CGTTCCATAAGCTCGAGTCGTAGGCATGACACGAGCTGGGCAAATTTACGGGCGACTGCG 330
****** ************* * *** ********* ********** ***
consensus_9254#2 CAAACAAC---ATGGCCAAGAT------GGTGGTGGGCAACAAAGATC---GACCACCCG 331
consensus_9254#3 CAA-CAAC---ATGGCCAAGAT------GGTGGTGGGCAACAAGATCT---GACCACCCG 355
consensus_9254#1 CAA-CAAC---ATGGCCAAGAT------GGTGGTGGGCAACAA-GATC---GACCACCCG 627
consensus_9254#0 CACACAACCATGGGGCCAAAGNTTGGTTGGTTGGGGCAAACAAAGATTCGGAACAACCCG 390
** **** ****** *** * ** ***** ** *****
consensus_9254#2 AAC-CGGG-----CCATCGGGCGGG-------------AGGAGGGCTTC---C-GGTTCG 368
consensus_9254#3 AAC-CGGG-----CCATCGGGCGGG-------------AGGAGGGCTTC---CTGGTTCG 393
consensus_9254#1 AAC-CGGG-----CCATCGGGCGGG-------------AGGAGGGCTTC---C-GGTTCG 664
consensus_9254#0 AACACAGGGGGCCCCATCCGGTGGAGANGGGGCAGGACAGGGGGGTTTCACCCGGGTTTT 450
*** * ** ***** ** ** *** *** *** * ****
consensus_9254#2 C----GAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTG 424
consensus_9254#3 C----GAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTG 449
consensus_9254#1 C----GAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTG 720
consensus_9254#0 CCGGGAAAGAAAAGGCACCGGCGATTGATTGTTTCAGTCGGAAAAACGGTTCCAGATGGA 510
* ***** * * * ** ** * * ** ** *** * *
consensus_9254#2 AA-GGACGCA---TTCGAGGAGGTGGTGCGCAAG--------ATT----ATGGAAACGGA 468
consensus_9254#3 ANAGGACGCA---TTCGAGGAGGTGGTGCGCAAG--------ATTT---ATGGAAACGGA 495
consensus_9254#1 AA-GGACGCA---TTCGAGGAGGTGGTGCGCAAG--------ATT----ATGGAAACGGA 764
consensus_9254#0 AAGAAACCNGAAGCNGNAGGGNGCCGTGCACAGGGCACGGCNATTTACGAAGGGGAAGGG 570
* ** *** * **** ** * *** * ** * **
consensus_9254#2 CGGACTGTGGGA----ACGGAAC---GACTACGGCGAT--GGTGGGGTCGATCTGCACGG 519
consensus_9254#3 CGGACTGTGGGA----ACGGAAC---GATACGGCCGATTGGGTGGGGTCGATCTGCACGG 548
consensus_9254#1 CGGACTGTGGGA----ACGGAAC---GACTACGGCGAT--GGTGGGGTCGATCTGCACGG 815
consensus_9254#0 TGGGTNGCCGGCCACCACGAACTTTANATTGGGACAGACCGGAGGAACGGGANACCATGG 630
** * ** *** * * * * ** ** * ** **
consensus_9254#2 CAAT-CGGGCGGCTG-GAGCGGCCGG-TTCGTGTTCTTG-TTAGCTTCCCGC---TATCG 572
consensus_9254#3 CA-T-CGGGCGGCTG-GAGCGGCCGGGTTCGTGTTCNTNGTTAGCTTTCCCCGCGTATCG 605
consensus_9254#1 CAAT-CGGGCGGCTG-GAGCGGCCGG-TTCGTGTTCTTG-TTAGCTTCCCGC---TATCG 868
consensus_9254#0 TGGTGTGAAAAACCGTGAAAAACAGAACATAACNCTGTGACAAGCACTACGATTGAGCGG 690
* * * * ** * * * *** * *
consensus_9254#2 C-TGCC---ATGCTTT---------CGTGCAAACCCCCTCCCCCCCCAT-----TTTCCT 614
consensus_9254#3 CGTGNC---ATGCTTTA--------CGTGCAAAACCCACCTCCNCCC-------CCCCAT 647
consensus_9254#1 C-TGCC---ATGCTTT-----------CGTGAAACCCCCTCCCCCCCAT-----TTTCCT 908
consensus_9254#0 NATACAGAAATTCTTTGCAGCCAGGTGGGCAAAATTCAGNGTNCAGTGTCATTGTNATCC 750
* ** **** * ** *
consensus_9254#2 ATGTTCG---TCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAG 671
consensus_9254#3 ATATCC----TAATGTTACCGT--CAACCGGCACTTCAATGACTNATTCNAATGCAACAT 701
consensus_9254#1 ATGCTCG----------------------------------------------------- 915
consensus_9254#0 GGGCCCGAGCTAACCGCGTCAGGNTACACTATCATGGNTAANAAGGCAATNCCCCCNGGN 810
*
consensus_9254#2 T-TAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTA 730
consensus_9254#3 CATTAACTGGTTACCAATT----------------------------------------- 720
consensus_9254#1 ------------------------------------------------------------
consensus_9254#0 ATTAATCGGGCATTGGCCATTGCANNTATACCCGATNGCAAAAAGCGCCACAATTANCCA 870
consensus_9254#2 TAGGTAAAATATTTTTAGCACATATTTAATCGCCCAGCCTCCCCTCTCCCACAGCGCGAG 790
consensus_9254#3 ------------------------------------------------------------
consensus_9254#1 ------------------------------------------------------------
consensus_9254#0 CANGCCCACAAATATTATCCATAATGATATCCGTACAACCCGGCAATCNNATGACTTNCT 930
consensus_9254#2 TGTGTGTGTTTTTGGAGAGGGGGTAGCGGATAAGGATGTAAAACACTAGGTGGAAATAAA 850
consensus_9254#3 ------------------------------------------------------------
consensus_9254#1 ------------------------------------------------------------
consensus_9254#0 TTCCAACTGCACAGCAATTTACAAGTTGGGTACCCAATTATAAAACAGGATANAAAGAAG 990
consensus_9254#2 AAGAAAAAAAACCGTTAAGATCACCTAA-------------------------------- 878
consensus_9254#3 ------------------------------------------------------------
consensus_9254#1 ------------------------------------------------------------
consensus_9254#0 AGGTATACATCAGTTAGAGGTTAAAAAGATTNGAAACCGTTGTATCATATAAAACNACGT 1050
consensus_9254#2 ---------------------------------------
consensus_9254#3 ---------------------------------------
consensus_9254#1 ---------------------------------------
consensus_9254#0 AGGCATCCCATTGGTANATAATAACGGGATAACAACNAA 1089
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||