cluster # 9257

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Anopheles gambiae
cluster # 9257 cluster # 9257 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9257#0 length = 899 sequences # 8
consensus_9257#1 length = 717 sequences # 5

consensus_9257#2 length = 577 sequences # 1
consensus_9257#3 length = 439 sequences # 1

consensusID : consensus_9257#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 899
fasta sequence

                              [AATCGCCCGAGGTTAAAATGGCTCTAATCAACATCCACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAACGAACGGCAGT-GG-TCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA-GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG-AAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGCTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAGGCACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATCATCACCAAAGTGTAGCCCCCAATAACGGTGCGGAGAAATAACGTGC]

[+] EMBL AL933402             [AATCGCCCGAGGTTAAAATGGCTCTAATCAACATCCACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAACGAACGGCAGT GG TCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG AAACGACCGACGGGCGGAT AATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGC  TTCGTTGCCATCGTTTg                                                                                                                                                                      ]
[+] EMBL AL694658             [                             atcccccgaGGTTAT CCTGGCTCA CGAGCTGGATGCATNNGAAAATCTGAGCAACGATATACAATCCCAGCTAGCGGCACGCAACCGCGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGCGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTTCTCTCCGGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTGGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAACGAACGGCAGT GG TCGCGGGCGAGGTGTAGTGGCGTTTGCCGACGAAGACGATGATGACGATCCGGCCCTGATACCGACGAACAGCAATTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGACGCTGGCGACAAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGGCAAACGACCGACGGGCGGATAAATCGAGAAACGCGTCAAA                                                                                                                                                                                                                                                  ]
[+] EMBL BX613674             [                                                       CGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAACGAACGGCAGT GG TCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG AAA                                                                                                                                                                                                                                                                                      ]
[+] EMBL AGA281421            [                                                                                                                                                                                                                                                                                                                                                     CGGTCCGCGCTGTTCGAAACGAACGGCAGTKGGTTCGCGGGCGAGGTGCAGTGGCGTTTGCSGACGACGACGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG AAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGCTTTTCGTTGCCATCGTTTT GTGGGCATTTTCTGAAAGTAAAGC                                                                                                                                             ]
[-] EMBL AGA283176            [                                                                                                                                                                                                                                                                                                                                                            CGCTGTTCGAAACGAACGGCAGT GG TCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG AAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGCTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAGGCACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATCATCACCAAAGTGTAGCCCCCAATAA                     ]
[+] EMBL AGA280692            [                                                                                                                                                                                                                                                                                                                                                             GCTGTTCGAAACGAACGGCAGT GG TCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG AAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGCTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAGGCACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTA                                                                               ]
[-] EMBL AGA281583            [                                                                                                                                                                                                                                                                                                                                                                                                                   GACGACGACGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG AAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGCTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAGGCACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATCATCACCAAAGTGTAGCCCCCAATAACGGTG                ]
[-] EMBL AGA282312            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACTATAGCGTGCCCGATTTGCGCAACCAGCAGACGCGCATTTTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGA GCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACGATCTGGCTCAAACGATGG AAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGCTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAGGCACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATCATCACCAAAGTGTAGCCCCCAATAACGGTGCGGAGAAATAACGTGC]




>consensus_9257#0
AATCGCCCGAGGTTAAAATGGCTCTAATCAACATCCACGGTGATCCCTGGCTCACCGAAC
TGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTG
AAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGC
AGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCA
CGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCC
AGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAA
CGAACGGCAGTGGTCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGATGACG
ATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGA
CGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGC
AAAAGGAGCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGACATACTGGACG
ATCTGGCTCAAACGATGGAAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCG
GAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGGGTTGCTTTTCG
TTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAGGCACAAGCTTCTT
GTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCT
CCGCCTGAGCATCATCACCAAAGTGTAGCCCCCAATAACGGTGCGGAGAAATAACGTGC

consensusID : consensus_9257#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 717
fasta sequence

                              [CAGATCGCCGAGGTGCGAAGACGATCGCCTTATCAAAATATTAATTACTCATCATTTTCTGGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCGTGACGTTGTCCTTCCACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAACGAACGGCAGTGGTCGCGGGCGAGGTG-AGTGGCGTTTGCCGACGACGACGATGAT-GACGATCCGGCACTGATACCGACGAGCAGCAACTATACAGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGAGCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCATCATCGTCGTCGTCGG]

[+] EMBL AL931222             [CAGATCGCCGAGGTGCGAAGACGATCGCCTTATCAAAATATTAATTACTCATCATTTTCTGGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCGTGACGTTGTCCTTCCACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCG                                                                                                                                                                                                                                                                     ]
[+] EMBL BX611377             [                                                                    GTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCGTGACGTTGTCCTTCCACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAACGAACGGCAGTGGTCGCGGGCGAGGTG TGTGGCGTTTGCCGACGACGACGATGAT GACGATCCGGCACTGATAC                                                                                                                                                                    ]
[+] EMBL BX615058             [                                                                                                                                            CTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTCAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAACGAACGGCAGTGGTCGC                                                                                                                                                                                                                               ]
[+] EMBL AGA284139            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTGTTCGAAACGAACGGCAGTGGTCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGATCGACGATCCGGCACTGATATCGACGAGCAGCAACTATACAGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGAGCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCATCATCGTCGTCGTCGG]
[-] EMBL AGA285435            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCAGTGGTCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGACGATGAT GACGATCCGGCACTGGTACCGACGAACAGCAACTATAGAGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGAGCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCATCATCGT         ]




>consensus_9257#1
CAGATCGCCGAGGTGCGAAGACGATCGCCTTATCAAAATATTAATTACTCATCATTTTCT
GGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCGTGACGTTGTCCTTC
CACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACT
GGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGA
AAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCA
GCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCAC
GGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCA
GTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGCGCTGTTCGAAAC
GAACGGCAGTGGTCGCGGGCGAGGTGAGTGGCGTTTGCCGACGACGACGATGATGACGAT
CCGGCACTGATACCGACGAGCAGCAACTATACAGTGGCCGATTTGCGCAACCAGCAGACG
CGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAA
AAGGAGCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCATCATCGTCGTCGTCGG

consensusID : consensus_9257#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 577
fasta sequence

                              [ACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGAGCTGGCGACAAGGATCGGCGGCGAGGTGGATCGTCACAATGACATTCTGGATGATTTGGCTCAAACGATGGAAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACTTGGGGTTACTGGATCGTTATAGGGTTACTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAAGCACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATCATCACCAAAGTGTAGCCCCCACTAACGTGCGGGTGTACTGGCAACTGATTACACTCCATATCGCAATGTATTTAAAGCCTAAAACACTACTATGTATACTACCTTAATAAAGCAAAACTTATTTACAATTTTAAAAAAAAAAAAAACCCACGCGTCCGCGG]

[-] EMBL BM622247             [ACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGAGCTGGCGACAAGGATCGGCGGCGAGGTGGATCGTCACAATGACATTCTGGATGATTTGGCTCAAACGATGGAAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAGGACTCAACTTGGGGTTACTGGATCGTTATAGGGTTACTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAAGCACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATCATCACCAAAGTGTAGCCCCCACTAACGTGCGGGTGTACTGGCAACTGATTACACTCCATATCGCAATGTATTTAAAGCCTAAAACACTACTATGTATACTACCTTAATAAAGCAAAACTTATTTACAATTTTAAAAAAAAAAAAAACCCACGCGTCCGCGG]




>consensus_9257#2
ACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGAT
CAAAACGAGGGCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGAGCTGGCGACA
AGGATCGGCGGCGAGGTGGATCGTCACAATGACATTCTGGATGATTTGGCTCAAACGATG
GAAACGACCGACGGGCGGATAAATCGAGAAACGCGCCAAATCGGAGCGATCACCACGCAG
GACTCAACTTGGGGTTACTGGATCGTTATAGGGTTACTTTTCGTTGCCATCGTTTTGGTG
GGCATTTTCTGAAAGTAAGGCAGGCTTGAAGCACAAGCTTCTTGTGTACACATTTATATA
ACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATCATCA
CCAAAGTGTAGCCCCCACTAACGTGCGGGTGTACTGGCAACTGATTACACTCCATATCGC
AATGTATTTAAAGCCTAAAACACTACTATGTATACTACCTTAATAAAGCAAAACTTATTT
ACAATTTTAAAAAAAAAAAAAACCCACGCGTCCGCGG

consensusID : consensus_9257#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence

                              [CCGCTTTCATCGCGAAGACGATCGCCCTTATCAAAATAATTAAATTACTCATCATTTTCTGGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCGTGACGTTGTCCTTCCACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAG]

[+] EMBL BM586115             [CCGCTTTCATCGCGAAGACGATCGCCCTTATCAAAATAATTAAATTACTCATCATTTTCTGGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCGTGACGTTGTCCTTCCACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACTGGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGAAAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCACGGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCAGTTGCAGCGCCAGTTCCAG]




>consensus_9257#3
CCGCTTTCATCGCGAAGACGATCGCCCTTATCAAAATAATTAAATTACTCATCATTTTCT
GGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCGTGACGTTGTCCTTC
CACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCACCGAACT
GGATGCATGCGAAAATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCGCAATCGTGA
AAATCAGCTCTCCCGCCAGTACAGCATCATTTCCGGCACGGTGCGCGTCCGGTTGAAGCA
GCTCGGCAGTGAGCTGGACCAGCTGACCCGCAAGCTGGGCCTGCTCTCCAGCACGCTCAC
GGCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTCGAAGCTGATCCA
GTTGCAGCGCCAGTTCCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9257#1      -CAGATCGCCGAGGT-GCGAAGACGATCGCC-TTATCAAAATATT--AATTACTCATCAT 55
consensus_9257#3      -----CCGCTTTCATCGCGAAGACGATCGCCCTTATCAAAATAATTAAATTACTCATCAT 55
consensus_9257#0      ------------------------------------------------------------
consensus_9257#2      ACGAACAGCAACTATAGCGTGGCCGATTTGCGCAACCAGCAGACGCGCATTCTGGAGGAT 60
                                                                                  

consensus_9257#1      TTTCTGGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCG--TGACGTT 113
consensus_9257#3      TTTCTGGCTGTGCGTAGTGGCCACTACACTTCCCTCCCCCCATCGAAAGCG--TGACGTT 113
consensus_9257#0      ------------------------------------------------------------
consensus_9257#2      CAAAACGAGG-GCCTGGAAGCGCTGTCGCAGGTGATCGCACGGCAAAAGGAGCTGGCGAC 119
                                                                                  

consensus_9257#1      GTCCTTCCACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCA 173
consensus_9257#3      GTCCTTCCACAAACCACTCCAAAATGGCTCTAATCAACATCGACGGTGATCCCTGGCTCA 173
consensus_9257#0      ------AATCGCCCGAGGTTAAAATGGCTCTAATCAACATCCACGGTGATCCCTGGCTCA 54
consensus_9257#2      AAGGATCGGCGGCGAGGTGGATCGTCACAATGA-CATTCTGGATGATTTGGCTCAAACGA 178
                               *          *   *  *  * * **   *  * * *    *       *

consensus_9257#1      CCGAACTGGATG-CATGCGAA-AATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCG 231
consensus_9257#3      CCGAACTGGATG-CATGCGAA-AATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCG 231
consensus_9257#0      CCGAACTGGATG-CATGCGAA-AATCTGAGCAACGATATACAGTCCCAGCTAGCGGCGCG 112
consensus_9257#2      TGGAAACGACCGACGGGCGGATAAATCGAGAAACGCGCCA-AATCGGAGCGATCACCACG 237
                        ***  *   * *  *** * **   *** ****    * * **  *** * *  * **

consensus_9257#1      CAATCGTGAAAATCAGCTCTCCCG-CCAGTACAGCATCATTTCCGGCACGGTGCGCGTCC 290
consensus_9257#3      CAATCGTGAAAATCAGCTCTCCCG-CCAGTACAGCATCATTTCCGGCACGGTGCGCGTCC 290
consensus_9257#0      CAATCGTGAAAATCAGCTCTCCCG-CCAGTACAGCATCATTTCCGGCACGGTGCGCGTCC 171
consensus_9257#2      CAGGACTCAACTTGGGGTTACTGGATCGTTATAGGGTTACTTTTCGT-TGCCATCGTTTT 296
                      **    * **  *  * *  *  *  *  ** **  * * **   *   *       *  

consensus_9257#1      GGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTG-ACCCGCAAGCTGGGCCTGCTCTCC 349
consensus_9257#3      GGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTG-ACCCGCAAGCTGGGCCTGCTCTCC 349
consensus_9257#0      GGTTGAAGCAGCTCGGCAGTGAGCTGGACCAGCTG-ACCCGCAAGCTGGGCCTGCTCTCC 230
consensus_9257#2      GGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAAGCACAAGCTTCTTGTGTACACATTTA 356
                      *** *         *  *** **   * *  *  * **  **    ** *    *  *  

consensus_9257#1      AGCACGCTCACG-GCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTC 408
consensus_9257#3      AGCACGCTCACG-GCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTC 408
consensus_9257#0      AGCACGCTCACG-GCGGGCGAGGCCGAACGAAGGCAGCGCCGCATAGAGGCGCTACAGTC 289
consensus_9257#2      TATAACCCCACTTGCAGTTGCGCCGTACCCTTATCTGCGATTTATCTCCGCCTGAGCATC 416
                         *  * ***  ** *  * * *  * *     * ***    **    **   *   **

consensus_9257#1      GAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGC 468
consensus_9257#3      GAAGCTGATCCAGTTGCAGCGCCAGTTCCAG----------------------------- 439
consensus_9257#0      GAAGCTGATCCAGTTGCAGCGCCAGTTCCAGTACGTTGAGCCGGCGGCCGCCCGGTCCGC 349
consensus_9257#2      A----TCACCAAAGTGTAGCCCCCACTAACGTGCGGGTGTACTGGCAACTGATTACACTC 472
                           * * * *  ** *** **   *   *                             

consensus_9257#1      GCTGTTCGAAACGAACGGCAGTGGTCGCGGGCGAGGTG-AGTGGCGTTTGCCGACGACGA 527
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      GCTGTTCGAAACGAACGGCAGTGGTCGCGGGCGAGGTGCAGTGGCGTTTGCCGACGACGA 409
consensus_9257#2      CATATCGCAATGTATTTAAAGCCTAAAACACTACTATGTATACTACCTTAATAAAGCAAA 532
                                                                                  

consensus_9257#1      CGATGATGACGATCCGGCACTGATACCGACGAGCAGCAACTATACAGTGGCCGATTTGCG 587
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      CGATGATGACGATCCGGCACTGATACCGACGAACAGCAACTATAGCGTGGCCGATTTGCG 469
consensus_9257#2      ACTTATTTACAATTTTAAAAAAAAAAAAAACCCACGCGTCCGCGG--------------- 577
                                                                                  

consensus_9257#1      CAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGT 647
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      CAACCAGCAGACGCGCATTCTGGAGGATCAAAACGAGGGCCTGGAAGCGCTGTCGCAGGT 529
consensus_9257#2      ------------------------------------------------------------
                                                                                  

consensus_9257#1      GATCGCACGGCAAAAGGAGCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCATCATCG 707
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      GATCGCACGGCAAAAGGAGCTGGCGACGAGGATCGGCGGCGAGGTGGATCGTCACAATGA 589
consensus_9257#2      ------------------------------------------------------------
                                                                                  

consensus_9257#1      TCGTCGTCGG-------------------------------------------------- 717
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      CATACTGGACGATCTGGCTCAAACGATGGAAACGACCGACGGGCGGATAAATCGAGAAAC 649
consensus_9257#2      ------------------------------------------------------------
                                                                                  

consensus_9257#1      ------------------------------------------------------------
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      GCGCCAAATCGGAGCGATCACCACGCAGGACTCAACCTGGGGCTACTGGATCGTGATAGG 709
consensus_9257#2      ------------------------------------------------------------
                                                                                  

consensus_9257#1      ------------------------------------------------------------
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      GTTGCTTTTCGTTGCCATCGTTTTGGTGGGCATTTTCTGAAAGTAAGGCAGGCTTGAGGC 769
consensus_9257#2      ------------------------------------------------------------
                                                                                  

consensus_9257#1      ------------------------------------------------------------
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      ACAAGCTTCTTGTGTACACATTTATATAACCCCACTTGCAGTTGCGCCGTACCCTTATCT 829
consensus_9257#2      ------------------------------------------------------------
                                                                                  

consensus_9257#1      ------------------------------------------------------------
consensus_9257#3      ------------------------------------------------------------
consensus_9257#0      GCGATTTATCTCCGCCTGAGCATCATCACCAAAGTGTAGCCCCCAATAACGGTGCGGAGA 889
consensus_9257#2      ------------------------------------------------------------
                                                                                  

consensus_9257#1      ----------
consensus_9257#3      ----------
consensus_9257#0      AATAACGTGC 899
consensus_9257#2      ----------