These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9267#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1294 fasta sequence [CCGCGGACGCGTGGGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAATGCTGAGGCGGCAAAGCGCGGCCTCGACGGTACCACGCGCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGTGTTCGGTCCGCTCGAGCGAGCCGTCGTGCAGGTGGACGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGGAGAAATGCTATTTCCTGACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAGATGATCAT-GGAGGAGG-AAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCTGAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATTAAAACGGAACTCGAAGAAATGACTACCCGTATCAAACGATCGGATGAAGAATTGCATCGCCGACAAAAAGAAAACAACATGTTCATGCAGAATCGCCAGATGAACATCATCGATCCGCAGCAGCAAATGAACGATATGGGTGGTATGGGTAGTGGTGGTGAT] [+] EMBL BM608041 [CCGCGGACGCGTGGGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAATGCTGAGGCGGCAAAGCGCGGCCTCGACGGTACCACGCGCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGTGTTCGGTCCGCTCGAGCGAGCCGTC ] [+] EMBL BM648682 [ cCGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAATGCTGAGGCGGCAAAGCGCGGCCTCGACGGTACCACGCGCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGTGTTCGGTCCGCTCGAGCGAGCCGTCGTGCAGGTGGACGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGGAGAAATGCTATTTCC GACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAAATGATCATGGGAGCAGGAAAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGC ] [+] EMBL BM653435 [ ccgCACGCGCAAGAACCGTGTGCTACGCGTGCGATTCGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTCGAAGTGTTCGGTCCGCTCGAGCGAGCCGTCGTACAGGTGGATGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCGATGGCTGCCATACGATACTGTACGGAGAAATGCTATTTCCTGACCGCGTCATTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGACTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAGATGATCAT GGAGGAGG AAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCTGAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATTAAAACGGAACTCGAAGAAATGACTACCCGTATCAAACG ] [+] EMBL BX616086 [ GAGCCGTCGTGCAGGTGGACGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGGAGAAATGCTATTTCCTGACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAGATGATCAT GGAGGAGG AAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCTGAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATTAAAACGGAACTCGAGGAAATGACTACCCGTATCAAACGATCGGATGAAGAATTGCATCGCCGACAAAAAGAAAACAACATGTTCATGCAGAATCGCCAGATGAACATCATCGATCCGCAGCAGCAAATGAACGATATGGGTGGTATGGGTAGTGGTGGTGAT] consensusID : consensus_9267#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 871 fasta sequence [CCGCCCACGCGTCCGCTTTTTCTTTGGTGTTCGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA-GCGTCCACAGCA-GCAAC--CGCATGGTGGT-GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC---------GGCGGACCA----G-----GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT---GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG-AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG-AAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCAT] [+] EMBL BM615580 [CCGCCCACGCGTCCGCTTTTTCTTTGGTGTTCGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAGTTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGGGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGTCCGGGCGGACCGGGTGGACCC GGCGGACCATGCGGACCATGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGTGGCGGCGGCGGTGGCAATCCCA ] [+] EMBL BM579550 [ ccgcTCGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG AAGCTTACTTT ] [+] EMBL BM593520 [ ccgGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCG ] [+] EMBL BM583262 [ ccgGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAAGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG AAGCTTACTTTATCAACGAG ] [+] EMBL BM605321 [ cCGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAA ] [+] EMBL BM585488 [ ccgGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAA ] [+] EMBL BM601263 [ ccGCC CACGCGTCCGC CCACGCGTCCGCGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG AAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCAT] consensusID : consensus_9267#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 865 fasta sequence [GTGAACCAAACGCAATCCCGTGCCAAGGAGCAGTCGGAGCAGCAGTCGAAGGACGATCAGCAGCAGCAGCAGCAGGCAGGCGTCGGGGCCGGCACTCGGGGTCAGCAGGAGCTTAACTCACTGGACGAAATAACGAACAAGGTGTTCGACGAGCTGAGGAATGGCAAAACGGCATTCGGTGGTGTCGTGACGGCAGTTGGAAAGGGGCCCGGCACCGTGGATGTAGATTGCGCGTCCGATACTTCATCGACGCGGCGCGATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAAAGTAAAAAATGCTCCACCGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCGGCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACACGCTCCCAGAACGATGAGCTGCTGGAGGGTCTGAAGCGAGCCCAACGGAGCCGGCTGGAGGATCAGCGGGGCACGGAAATCAATTTCGAGCTGCCCGACTTTCTGAAGGACAAGGAAAACTTTTCCACTAGCTCCGCCGCGGTTAGTAGCAGTGCGGGATCGATTGGCCCCTCGGCAGCACCCTCGTCGGCGGCAGGCCCTTCCAAGCTGACGCGCAGTAAGCCGGCCCGCCGCTCGGAGGCTACCACCCCGACGGCGGAGTTTGTAGGCGGTTCGTTGCAGCAAATCAACAAGCCCCAGCCAGCGCCGCGGTTATCGATCACCGGTCAGCAGGGACGCCAGAACCTGTCCGGGCCGGGATCGCCCGTCCATGCGGCCGTCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGC] [+] EMBL AGA282063 [GTGAACCAAACGCAATCCCGTGCCAAGGAGCAGTCGGAGCAGCAGTCGAAGGACGATCAGCAGCAGCAGCAGCAGGCAGGCGTCGGGGCCGGCACTCGGGGTCAGCAGGAGCTTAACTCACTGGACGAAATAACGAACAAGGTGTTCGACGAGCTGAGGAATGGCAAAACGGCATTCGGTGGTGTCGTGACGGCAGTTGGAAAGGGGCCCGGCACCGTGGATGTAGATTGCGCGTCCGATACTTCATCGACGCGGCGCGATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAAAGTAAAAAATGCTCCACCGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCGGCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACACGCTCCCAGAACGATGAGCTGCTGGAGGGTCTGAAGCGAGCCC ] [+] EMBL BX602402 [ TCATCGACGCGGCGCGATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAAAGTAAAAAATGCTCCACCGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCGGCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACACGCTCCCAGAACGATGAGCTGCTGGAGGGTCTGAAGCGAGCCCAACGGAGCCGGCTGGAGGATCAGCGGGGCACGGAAATCAATTTCGAGCTGCCCGACTTTCTGAAGGACAAGGAAAACTTTTCCACTAGCTCCGCCGCGGTTAGTAGCAGTGCGGGATCGATTGGCCCCTCGGCAGCACCCTCGTCGGCGGCAGGCCCTTCCAAGCTGACGCGCAGTAAGCCGGCCCGCCGCTCGGAGGCTACCACCCCGACGGCGGAGTTTGTAGGCGGTTCGTTGCAGCAAATCAACAAGCCCCAGCCAGCGCCGCGGTTATCGATCACCGGTCAGCAGGGACGCCAGAACCTGTCCGGGCCGGGATCGCCCGTCCATGCGGCCGTCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGC] consensusID : consensus_9267#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence [CCGCGGACGCGTGGGGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCAGGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTGTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAAATGCTGAGGCGGCAAAGCGC] [+] EMBL BM611695 [CCGCGGACGCGTGGGGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCAGGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTGTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAAATGCTGAGGCGGCAAAGCGC] consensusID : consensus_9267#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 489 fasta sequence [GTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGCTGGACCCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGCCGCAGGACGATCCATTCCACGTGCACGGGGGCGGCAGCGGCACTAATGGCGGTTCGCAGTCCGAAACTAGCTATGCCGACACTACCCTAGTCTTCACCCATGCCCGACCTTACAAT] [+] EMBL BM642267 [GTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGCTGGACCCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGCCGCAGGACGATCCATTCCACGTGCACGGGGGCGGCAGCGGCACTAATGGCGGTTCGCAGTCCGAAACTAGCTATGCCGACACTACCCTAGTCTTCACCCATGCCCGACCTTACAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 ------------------------------------------------------------ consensus_9267#0 CCGCGGACGCGTGGGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCG 60 consensus_9267#2 ------------------------------------------------------------ consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 ------------------------------------------------------------ consensus_9267#0 TCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGATTTCGGTCCCAATCA 120 consensus_9267#2 ------------------------------------------------------------ consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 ------------------------------------------------------------ consensus_9267#0 GCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAA 180 consensus_9267#2 ------------------------------------------------------------ consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 ------------------------------------------------------------ consensus_9267#0 CAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATCAACGAGAAGCTTCGCCA 240 consensus_9267#2 ------------------------------------------------------------ consensus_9267#3 --------------------------------------------------CCGCGGACGC 10 consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 ---------------------------------CCGCCCACGCGTCCGCTTTTTCTTTGG 27 consensus_9267#0 GCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGG 300 consensus_9267#2 ------------------------------------------------------------ consensus_9267#3 GTGGGGTGGGAA--ACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATC-GATTGG 67 consensus_9267#4 -----GTGGGAA--ACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATC-GATTGG 52 consensus_9267#1 TGTTCGTGGGAA--ACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATC-GATTGG 84 consensus_9267#0 CCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGA 360 consensus_9267#2 -------GTGAA--CCAAACGCAATCCCGT--GCCAAGGAGCAGTCG--GAGC--AGCAG 45 * * **** * * * * ** * consensus_9267#3 TGTGAGCAA-GTGAGTGGCTGA--CAGTGAAGTGTAATTTGAGAATTACATAATTTGGGA 124 consensus_9267#4 TGTGAGCAA-GTGAGTGGCTGA--CAGTGAAGTGTAATTTGAGAATTACATAATTTTGGA 109 consensus_9267#1 TGTGAGCAA-GTGAGTGGCTGA--CAGTGAAGTGTAATTTGAGAATTACATAATTTTGGA 141 consensus_9267#0 TATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGC 420 consensus_9267#2 TCGAAGGACGATCAGCAGCAGCAGCAGC-AGGCAGGCGTCGGGGCCGGCAC---TCGGGG 101 * * * ** *** * * * * * * consensus_9267#3 TTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAA-AAGAAACAA-GCGAAAA-TGGATG 181 consensus_9267#4 TTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAA-AAGAAACAA-GCGAAAA-TGGATG 166 consensus_9267#1 TTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAA-AAGAAACAA-GCGAAAA-TGGATG 198 consensus_9267#0 CTTTGTGCGCGTAGATTA---TCTCTCGAATGCTG-AGGCGGCAAAGCGCGGCCTCGACG 476 consensus_9267#2 TCA---GCAGGAGCTTAA---CTCACTGGACGAAATAACGAACAAGGTGT----TCGACG 151 * * * * * * * *** * * * ** * consensus_9267#3 TTGCTGTGAAGCAAGAAAT-----TAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCA 236 consensus_9267#4 TTGCTGTGAAGCAAGAAAT-----TAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCA 221 consensus_9267#1 TTGCTGTGAAGCAAGAAAT-----TAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCA 253 consensus_9267#0 GTACCACGC-GCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATC 535 consensus_9267#2 A-GCTGAGGAATGGCAAAACGGCATTCGGTGGTGTCGTGACGGCAGTTGGAAAGGGGCCC 210 * * ** * * * * * * * consensus_9267#3 ACCGC-ATGGTGGTGGGTGGTGGGGGTCCCGGCC------CTATGCAAGGCAATAATCAA 289 consensus_9267#4 ACCGC-ATGGTGGTGG-TGGTGGGGGTCCCGGCC------CTATGCAAGGCAATAATCAA 273 consensus_9267#1 ACCGC-ATGGTGGTGG-TGGTGGGGGTCCCGGCC------CTATGCAAGGCAATAATCAA 305 consensus_9267#0 CGCGT-CAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGT 594 consensus_9267#2 GGCACCGTGGATGTAG--ATTGCGCGTCCGATAC------TTCATCGACGCGG----CGC 258 * * * * *** * * * * ** consensus_9267#3 GCTGGGCCCGATCAGCACGGCCCAGGCG--GCCCGGGCGGACCGGGTGGACC---CGGCG 344 consensus_9267#4 GCTGGGCCCGATCAGCACGGCCCAGGCG--GCCCGGGCGGACCGGCTGGACC---CAGCG 328 consensus_9267#1 GCTGGGCCCGATCAGCACGGCCCAGGCG--GCCCGGGCGGACCGGGTGGACC---CGGCG 360 consensus_9267#0 GTTCGGTCCGCTCGAGCGAGCCGTCGTGC-AGGTGGACGAGCGTGGTAAACCGACCGGCG 653 consensus_9267#2 GATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAA 318 * * * * ** * * ** * * consensus_9267#3 G--ACCAGGCGGACCA----GGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACA 398 consensus_9267#4 ATAGCCATCTGAATCT----GTCCACCCAG-TGCAATGCTTCGCCCCTGCCGCAGGACGA 383 consensus_9267#1 G-----------ACCA----GGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACA 405 consensus_9267#0 AGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGG 713 consensus_9267#2 AGTAAAAAATGCTCCAC--CGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCG 376 * * * * * consensus_9267#3 TGAACAGAAA-----TAATCGCAACAATAGCAAGAATCGCCA--GAGCATGCCGCTGTTC 451 consensus_9267#4 TCCATTCCA------CGTGCACGGGGGCGGCAGCGGCACTAA--TGGCGGTTCGCAGTCC 435 consensus_9267#1 TGAACAGAAA-----TAATCGCAACAATAGCAAGAATCGCCA--GAGCATGCCGAATCGC 458 consensus_9267#0 AGAAATGCTATTTCCTGACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACC 773 consensus_9267#2 GCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACAC 436 * * ** * consensus_9267#3 GAAATTCCACCGA-TCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTGTACGT 510 consensus_9267#4 GAAACT--AGCTA-TGCCGACAC----TACCCTAGTCTTCACCCATGCCCGACCTTACAA 488 consensus_9267#1 AATCGCGGTCCGGGTGGTAATGCTGGTGGCGGCGGTGGCAATCCCAACAATAACGGTGGT 518 consensus_9267#0 AGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGA 833 consensus_9267#2 GCTCCCAGAACGATGAGCTGCTGG---AGGGTCTGAAGCGAGCCCAACGGAGCCGGCTGG 493 * consensus_9267#3 CGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGG 570 consensus_9267#4 T----------------------------------------------------------- 489 consensus_9267#1 CCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGAT 578 consensus_9267#0 AGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATG-GC 892 consensus_9267#2 AGGATCAGCGG--GGCACGGAAATCAATTTCGAGCTGCCCGACTTTCTGAAGGACAAGGA 551 consensus_9267#3 CGAGATCAGCGAAGTGTTCATGAACAAG--GAGAAAA--ATTACGCCTTTGTGCGCGTAG 626 consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 TTCGGTCCCAATCAGCACCAGAACCGGG--GTGGCATGCATCGGGGCAACAACCGCGGAG 636 consensus_9267#0 CAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAG 952 consensus_9267#2 AAACTTTTCCACTAGCTCCGCCG-CGGTTAGTAGCAG-TGCGGGATCGATTGGCCCCTCG 609 consensus_9267#3 ATTATCTCTC-GAAATGCTGAGGCGGCAAAGCGC-------------------------- 659 consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 GAAATGATAT-GGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATC 695 consensus_9267#0 ATGATCATGGAGGAGGAAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAA 1012 consensus_9267#2 GCAGCACCCT--CGTCGGCGGCAGGCCCTTCCAAGCTGACGCGCAGTAAGCCGGCCCGCC 667 consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 AACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAG 755 consensus_9267#0 ACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCT 1072 consensus_9267#2 GCTCGGAGGCTACCACCCCGACGGCGGAGTTTGTAGGCGGTTCGTTGCAGCAAATCAACA 727 consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 GATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACG 815 consensus_9267#0 GAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATT 1132 consensus_9267#2 AGCCCCAGCCAGCGCCGCGGTTATCGATCACCGGTCAGCAGGGACGCCAGAACCTGTCCG 787 consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 GAGGAAGA--GCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCAT-- 871 consensus_9267#0 AAAACGGA--ACTCGAAGAAATGACTACCCGTATCAAACGATCGGATGAAGAATTGCATC 1190 consensus_9267#2 GGCCGGGATCGCCCGTCCATGCGGCCGTCAGCGATAGCCATCTGAATCTGTCCACCCAGT 847 consensus_9267#3 ------------------------------------------------------------ consensus_9267#4 ------------------------------------------------------------ consensus_9267#1 ------------------------------------------------------------ consensus_9267#0 GCCGACAAAAAGAAAACAACATGTTCATGCAGAATCGCCAGATGAACATCATCGATCCGC 1250 consensus_9267#2 GCAATGCTTCGCCCCTGC------------------------------------------ 865 consensus_9267#3 -------------------------------------------- consensus_9267#4 -------------------------------------------- consensus_9267#1 -------------------------------------------- consensus_9267#0 AGCAGCAAATGAACGATATGGGTGGTATGGGTAGTGGTGGTGAT 1294 consensus_9267#2 -------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||