cluster # 9268

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Anopheles gambiae
cluster # 9268 cluster # 9268 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9268#0 length = 1781 sequences # 13

consensus_9268#1 length = 575 sequences # 1
consensus_9268#2 length = 101 sequences # 1

consensusID : consensus_9268#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1781
fasta sequence

                              [CCGCCCACGCGTCCGCGC-GGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAAATTCTGCCAGTG-ACCATCAAAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCATGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCTGAAGG------TGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCC-GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACCTGGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGATGGCGCGCGAAAACGCCAAGGATATCATTGCGATTGGGTTCGATCCGAGCAAAACGTTCATCTTTTCCAACCTGGAC-TTTATGGGCCAGTGCCCCCAGTTCTACCAGAACATTATACGCATCCAGAAGTGCGTCACGTTCAACCAGGTGAAGGGCATATTCGGGTTCGGCGACTCGGACGTGATTGGCAAGATCGGGTTTCCGGCGGCCCAGGCAGCACCCGCGTTCTCGACCACCTTTCCCTTCATCTTCGGCACGGACAAGCTGCCCGTGCTGATTCCCTGTGCGATCGATCAGGATCCTTACTTCCGCATGACGCGTGACGTATCGCCCCGGCTCGGCTT-CCCCAAGCCGGCCCTTATCC-ATTCGAGCTTTTT-CCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATACCAACTCGGCCGTCTTCCTAACCGACACGGCCAAGCAGAACAAGACGAAGAACAACAAGCACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGGACATTGACGTGAGCTTCCAGCTGCTGCGATTCTTCCTGGAGGACGATGCCGAGCTGGAGCGCATCCGGGTCGCGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGATCGACACGCTGCAACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGACGTGGCGGATGAGGTGCTTAATCTGTTCCTTACGCCCAGGAAGCTCAACTACGAGTTCACCGTAAAGCTGCCCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAAAGATAAGAAGGCGGCTAAGCCGAATTAGCGACGATTGTGTGGCAAATACACATCGCGGTTGGTCGCATTCGGGCATGCAATTATCGGTACTTTAGAGGATTATGATAAGGGCGGCGTAACACACGTCGCTAATCATTTTCCGCGTTCGGCAGCAGTGCTTCTATGGATTTGAACGGTACGGAAGTACCTGTTCCGCGAATTACTTCACCCCCAAGCCACACCAACACGGAAC-----ACTTCGGTTGGTGGTGGTGCTGTGGAAACATTTATTTATTTTATTTTTAGCCGCGTCGTTGCTTTGCTTACTGCAAGTAAAACTAAATGCACGGTGATGAATAAACGTGATGGTTAAAAAAAA]

[+] EMBL BM629776             [CCGCCCACGCGTCCGCGC GGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAAATTCTGCCAGTG ACCATCAAAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCATGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCTGAAGG      TGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCC GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACCTGGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS08O1A             [         CGGCAGCGCGGGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAAATTCTGCCAGTG ACCATCAAAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCATGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCTGAAGG      TGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCC GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACCTGGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGATGGCGCGCGAAAACGCCAAGGATATCATTGCGATTGGGTTCGATCCGAGCAAAACGTTCATCTTTTCCAACCTGGAC TTTATGGGCCAGTGCCCCCAGTTCTACCAGAACATTATACGCATCCAGAAGTGCGTCACGTTCAACCAGGTGAAGGGCATATTCGGGTTCGGCGACTCGGACGTGATTGGCAAGATCGGGTTTCCGGCGGCCCAGGCAGCACCCGCGTTCTCGACAACCTTCCCCTTCATCTTCGGCACGGACAAGCTGCCCGTGTTGATTCCCTGTGCGATCGATCAGGATCCTTACTTCCGCATGACGCGTGACGTATCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM632042             [            CCGCGC GGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAAATTCTGCCAGTG ACCATCAAAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCATGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCTGAAGG      TGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCC GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM628984             [            CCG GC GGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAAATTCTGCCAGTG ACCATCAAAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCATGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCTGAAGG      TGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCC GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACC  GTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGATGGCGCGCGAAAACGCCAAGGATATCATTGCGATTGGGTTCGATCCGAGCAAAACGTTCATCTTTTCCAACCTGGACTTTTATGGGCCAGTGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM597488             [              cCGC GGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAAATTCTGCCAGTG ACCATCAGAGTTTGAATGAAAGTGCGGCAATATTAGGACAGGAAATCATGAGCAATCTTCCGGACGTAGAGCAGCTGAAGCTGGAGGAAAACCACAACAGCGCGGAAGGGAATGCTGCCGCCGCCGCCCCGGTCGCAGAAGACGTGGTCGATCCATGGACTGTTACCAGCTCATCC GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTTGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAAGCGGGCAAGAAGTTTTACCTGTACACCGGCCGTGGGCCGTCGTCGGACTCGATGCATTTAGGTCACCTGGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGATGGCGCGCGAAAACGCCAAGGATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09OWL             [                                        cCACTTTCGCACAGCACGGAAATTCTGCCAGTGCACCATCAGAGTTTGAATGAAAGTGCGGCAATATTAGGACAGAAAATCATGAGCAATCTTCCGGATGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCAGAAGGGAATGCTGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCCTGATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATCTAGGTCACCTGGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGATGGCGCGCGAAAACGCCAAGGATATCATTGCGATTGGGTTCGATCCGAGCAAAACGTTCATCTTTTCCAACCTGGAC TTTATGGGCCAGTGCCCCCAGTTCTACCAGAACATTATACGCATCCAGAAGTGCGTCACATTCAACCAGGTGAAGGGCATATTCGGGTTCGGCGACTCGGACGTGATTGGCAAGATCGGGTTTCCGGCGGCCCAGGCAGCACCCGCATTCTCGACCACCTTTCCCTTCATCTTCGGCACGGACAAGCTGCCCGTGCTGATTCCCTGTGCGATCGATCAGGATCCCTACTTCCGCATGACGCGTGACGTATCGCCCCGGCTCGGCTT CCCCAAGCCGGCCCTTATCC ATTCGAGCTTTTT CCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATACCAACTCAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM596864             [                                      ccgCACTTTCGCACAGCACGGAAATTCTGCCAGTG ACCATCAGAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCATGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAACCACAACAGCGCGGAAGGGAATGCTGCCGCCGCCGCTCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCC GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACCTTGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX609687             [                                                                                                                                      CGGACGTAGAGCAGTTGAAGCTGGAGGAAAA CACACCAGCGCTGAAGG      GGCCGCCGCCGCCCCGGTCGTGGAAGACGGGGTGGAACCATGGACGGTTACCAGCTCATCC GAag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AGA282582            [                                                                                                                                                                                   AAGG      TGCCGCCGCCGCCCCGGTCGTGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCATCC GATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTTGGATGTTCACATATCGATGCGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTCGTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCAAGAAGTTTTACCTGTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACTTGGTGCCCTTCATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX618190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGCAGGAAGCGTTCGATGTGCCGCTGGGCATTCAGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGAGGGCGCGCGAAAACGCCAAGGATATCATTGCGATCGGGTTCGATCCGAGCAAAACGTTCATCTTTTCCAACCTGGAC TTTATGGGCCAGTGTCCGCAGTTCTACCAGAACATTATACGCATCCAGAAGGGCGTCACGTTCAACCAGGTGAAGGGCATATTCGGGTTCGGCGACTCGGACGTGATTGGCAAGATCGGGTTTCCGGCGGCCCAGGCAGCACCCGCGTTCTCGACCACCTTTCCCTTCATCTTCGGCACGGACAAGCTGCCCGGGCTGATTCCCTGTGCGATCGATCAGGATCCCTACTTCCGCATGACGCGTGACTTATCGCCCCGGCTCGGCTT CCCCAAGCCGGCCCTCATCC ATTCGAGCTTTTT CCCCGCGCTGCAGGGCGCACGGACGAAAAGGTCGGCCAGCGATACCAACTCGGCCGTCTTCCTAACCGACACGGCCAAGCAGAACAAGACGAAGAACAACAAGCACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGGACATTGACGTGAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS09OWM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTGACCGACGATGAGAAGACGCTGTGGAAAAACCTGACCGTCGAGCAGTCGATGCGGATGGCGCGCGAAAACGCCAAGGATATCATTGCGATTGGGTTCGATCCGAGCAAAACGTTCATTTTTTCCAACCTGGAC TTTATGGGCCAGTGCCCCCAGTTCTACCAGAACATTATACGCATCCAGAAGTGCGTCAAATTCAACCAGGTGAAGGGCATATTCGGGTTCGGCGAATCGGACGTGATTGGCAAGATCGGGTTTCCGGCGGCCCAGGCAGCACCCGCATTCTCGACCACCTTTCCCTTCATTTTCGGCACGGACAAGCTGCCCGTGCTGATTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS08O1B             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTACTTCCGCTTGACGCGTGACGTATCGCCCCGGCTCGGCTTCCCCCAAGCCGGCCCTTATCCAATTCGAGCTTTTTCCCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATACCAACTCGGCCGTCTTCCTTACCGACACGGCCAAGCAGATCAAGACGAAGATCAAAAAGCACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGGACATTGACGTGAGCTTCCAGCTGCTGCGATTCTTCCTGGAGGACGATGCCGAGCTGGAGCGCATCCGGGTCGCGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGATCGACACGCTGCAACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGACGTGGCGGATGAGGTGCTTAATCTGTTCCTTACGCCCAGGAAGCTCAACTACGAGTTCACCGTAAAGCTGCCCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAAAGATAAGAAGGCGGCTAAGCCGAATTAGCGACGATTGTGTGGCAAATACACATCGCGGTTGGTCGCATTCGGGCATGCAATTATCGGTACTTTAGAGGATTATGATAAGGGCGGCGTAACACACGTCGCTAATCATTTTCCGCGTTCGGCAGCAGTGCTTCTATGGATTTGAACGGTACGGAAGTACCTGTTCCGCGAATTACTTCACCCCCAAGCCACACCAACACGGAAC     ACTTCGGTTGGTGGTGGTGCTGTGGAAACATTTATTTATTTTATTTTTAGCCGCGTCGTTGCTTTGCTTACTGCAAGTAAAACTAAATGCACGGTGA                          ]
[-] EMBL AGA280952            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAAAGCTCCCCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAAAGATAAGAAGGCGGCTAAGCCGAATTAGCGACGATTGTG GGCAAATACACATCGCGGTCGGTCGCATTCGGGCATGCAATTATCGGTACTTTAGAGGATTATGATAAGGGCGGCGTCACACACGTCACTAATCATGTTCCGCGTTCGGCAGCAGTGCTTCTATGAATTTGAACGGTACGGAAGTACCTGTTCCGCGAATTACTTCACCCCACAGCCACATAAAAACGGAACCGGATACTTCAGTTGGTGGTGGTGCTGTGGAAATATTTATTTATTTTATTTTTAGCCGCGTCGTTGCTTTGCTTACTGCAAGTAAAACTAAATGCACGGTGATGAATAAACGTGATGGTTAAAAAAAA]




>consensus_9268#0
CCGCCCACGCGTCCGCGCGGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAA
ATTCTGCCAGTGACCATCAAAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCA
TGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCTGAAG
GTGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCAT
CCGATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATG
CGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTC
GTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCA
AGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACC
TGGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTC
AGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGA
TGGCGCGCGAAAACGCCAAGGATATCATTGCGATTGGGTTCGATCCGAGCAAAACGTTCA
TCTTTTCCAACCTGGACTTTATGGGCCAGTGCCCCCAGTTCTACCAGAACATTATACGCA
TCCAGAAGTGCGTCACGTTCAACCAGGTGAAGGGCATATTCGGGTTCGGCGACTCGGACG
TGATTGGCAAGATCGGGTTTCCGGCGGCCCAGGCAGCACCCGCGTTCTCGACCACCTTTC
CCTTCATCTTCGGCACGGACAAGCTGCCCGTGCTGATTCCCTGTGCGATCGATCAGGATC
CTTACTTCCGCATGACGCGTGACGTATCGCCCCGGCTCGGCTTCCCCAAGCCGGCCCTTA
TCCATTCGAGCTTTTTCCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATA
CCAACTCGGCCGTCTTCCTAACCGACACGGCCAAGCAGAACAAGACGAAGAACAACAAGC
ACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGG
ACATTGACGTGAGCTTCCAGCTGCTGCGATTCTTCCTGGAGGACGATGCCGAGCTGGAGC
GCATCCGGGTCGCGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGA
TCGACACGCTGCAACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGACGTGGCGGATG
AGGTGCTTAATCTGTTCCTTACGCCCAGGAAGCTCAACTACGAGTTCACCGTAAAGCTGC
CCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAAAGATAAGAAGGCGG
CTAAGCCGAATTAGCGACGATTGTGTGGCAAATACACATCGCGGTTGGTCGCATTCGGGC
ATGCAATTATCGGTACTTTAGAGGATTATGATAAGGGCGGCGTAACACACGTCGCTAATC
ATTTTCCGCGTTCGGCAGCAGTGCTTCTATGGATTTGAACGGTACGGAAGTACCTGTTCC
GCGAATTACTTCACCCCCAAGCCACACCAACACGGAACACTTCGGTTGGTGGTGGTGCTG
TGGAAACATTTATTTATTTTATTTTTAGCCGCGTCGTTGCTTTGCTTACTGCAAGTAAAA
CTAAATGCACGGTGATGAATAAACGTGATGGTTAAAAAAAA

consensusID : consensus_9268#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence

                              [ATCGCCCGAGGNTTGCCGTGCTGATTCCCTGTGCGATCGATCAGGATCCCTACTTCCGCATGACGCGTGACGTATCGCCCCGGCTCGGCTTCCCCAAGCCGGCCCTCATCCATTCGAGCTTTTTCCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATACCAACTCGGCCGTCTTCCTAACCGACACGGCCAAGCAGATCAAGACGAAGATCAACAAGCACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGGACATTGACGTGAGCTTCCAGCTGCTGCGGTTCTTCCTGGAGGATGATGCCGAGCTGGAGCGCATCCGGGTCGCGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGATCGACACGCTGCAACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGAAGTGACGGATGAGGTGCTTAACCTGGTTCCTTACGCCCAGGAAGCTGAACTACGAGTTCACAGTAAAGCTGCCCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAA]

[+] EMBL AL693445             [ATCGCCCGAGGNTTGCCGTGCTGATTCCCTGTGCGATCGATCAGGATCCCTACTTCCGCATGACGCGTGACGTATCGCCCCGGCTCGGCTTCCCCAAGCCGGCCCTCATCCATTCGAGCTTTTTCCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATACCAACTCGGCCGTCTTCCTAACCGACACGGCCAAGCAGATCAAGACGAAGATCAACAAGCACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGGACATTGACGTGAGCTTCCAGCTGCTGCGGTTCTTCCTGGAGGATGATGCCGAGCTGGAGCGCATCCGGGTCGCGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGATCGACACGCTGCAACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGAAGTGACGGATGAGGTGCTTAACCTGGTTCCTTACGCCCAGGAAGCTGAACTACGAGTTCACAGTAAAGCTGCCCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAA]




>consensus_9268#1
ATCGCCCGAGGNTTGCCGTGCTGATTCCCTGTGCGATCGATCAGGATCCCTACTTCCGCA
TGACGCGTGACGTATCGCCCCGGCTCGGCTTCCCCAAGCCGGCCCTCATCCATTCGAGCT
TTTTCCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATACCAACTCGGCCG
TCTTCCTAACCGACACGGCCAAGCAGATCAAGACGAAGATCAACAAGCACGCGTTCTCGG
GCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGGACATTGACGTGA
GCTTCCAGCTGCTGCGGTTCTTCCTGGAGGATGATGCCGAGCTGGAGCGCATCCGGGTCG
CGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGATCGACACGCTGC
AACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGAAGTGACGGATGAGGTGCTTAACC
TGGTTCCTTACGCCCAGGAAGCTGAACTACGAGTTCACAGTAAAGCTGCCCGGCGATAGT
GCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAA

consensusID : consensus_9268#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 101
fasta sequence

                              [TCCGGACGTAGAGCAGTCGAAGCCGGAGGAAAATCACACCAGCGCTGAAGGGGCCGCCGCCGCCCCGGTCGGGGAAGACGTGGTGGAACCATGGACGGGTA]

[+] EMBL BX618108             [TCCGGACGTAGAGCAGTCGAAGCCGGAGGAAAATCACACCAGCGCTGAAGGGGCCGCCGCCGCCCCGGTCGGGGAAGACGTGGTGGAACCATGGACGGGTA]




>consensus_9268#2
TCCGGACGTAGAGCAGTCGAAGCCGGAGGAAAATCACACCAGCGCTGAAGGGGCCGCCGC
CGCCCCGGTCGGGGAAGACGTGGTGGAACCATGGACGGGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9268#0      CCGCCCACGCGTCCGCGCGGTGTGTTGGCAGAGAAAATCACACTTTCGCACAGCACGGAA 60
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      ATTCTGCCAGTGACCATCAAAGTTTGAATGAAAGTGCGGCAATATTAGGACGGGAAATCA 120
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TGAGCAATCTTCCGGACGTAGAGCAGTTGAAGCTGGAGGAAAATCACACCAGCGCTGAAG 180
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      GTGCCGCCGCCGCCCCGGTCGCGGAAGACGTGGTTGATCCATGGACTGTTACCAGCTCAT 240
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CCGATGCGGGAATTGATTACGATAAGTTGATAAAGCGGTTCGGATGTTCACATATCGATG 300
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CGGCACTGATCGAGCGGCTCGAAAAGGTCGCGGGAAAACCGGTTCACCATCTGATCCGTC 360
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      GTGGTATATTCTTTTCGCACCGTGACCTACACACACTGCTGAATGCGGTAGAGGCGGGCA 420
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      AGAAGTTTTACCTCTACACCGGCCGTGGACCGTCGTCGGACTCGATGCATTTAGGTCACC 480
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TGGTGCCCTTTATCGTGACGAAATGGTTGCAGGAAGCGTTCGATGTGCCGCTGGTCATTC 540
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      AGCTGACCGACGATGAGAAGACGCTGTGGAAAGACCTGACCGTCGAGCAGTCGATGCGGA 600
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TGGCGCGCGAAAACGCCAAGGATATCATTGCGATTGGGTTCGATCCGAGCAAAACGTTCA 660
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TCTTTTCCAACCTGGACTTTATGGGCCAGTGCCCCCAGTTCTACCAGAACATTATACGCA 720
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TCCAGAAGTGCGTCACGTTCAACCAGGTGAAGGGCATATTCGGGTTCGGCGACTCGGACG 780
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TGATTGGCAAGATCGGGTTTCCGGCGGCCCAGGCAGCACCCGCGTTCTCGACCACCTTTC 840
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CCTTCATCTTCGGCACGGACAAGCTGCCCGTGCTGATTCCCTGTGCGATCGATCAGGATC 900
consensus_9268#1      ---------ATCGCCCG---AGGNTTGCCGTGCTGATTCCCTGTGCGATCGATCAGGATC 48
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CTTACTTCCGCATGACGCGTGACGTATCGCCCCGGCTCGGCTTCCCCAAGCCGGCCCTTA 960
consensus_9268#1      CCTACTTCCGCATGACGCGTGACGTATCGCCCCGGCTCGGCTTCCCCAAGCCGGCCCTCA 108
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TCCATTCGAGCTTTTTCCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATA 1020
consensus_9268#1      TCCATTCGAGCTTTTTCCCCGCGCTGCAGGGCGCACGGACGAAAATGTCGGCCAGCGATA 168
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CCAACTCGGCCGTCTTCCTAACCGACACGGCCAAGCAGAACAAGACGAAGAACAACAAGC 1080
consensus_9268#1      CCAACTCGGCCGTCTTCCTAACCGACACGGCCAAGCAGATCAAGACGAAGATCAACAAGC 228
consensus_9268#2      ---------------------TCCGGACG-TAGAGCAGTCGAAGCCGGAGGAAAATCA-C 37
                                            *   ***    *****   *** ** **   **  * *

consensus_9268#0      ACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGG 1140
consensus_9268#1      ACGCGTTCTCGGGCGGGCGGCAAACGCTCGAGGAGCACCGGGAGCACGGTGGCAACACGG 288
consensus_9268#2      ACCAGCGCT-GAAGGGGCCGCCGCCGCCCCGGT--CGGGGAAGACGTGGTGGAACCATGG 94
                      **  *  ** *   **** **   *** *  *   *   *    *  ***** * ** **

consensus_9268#0      ACATTGACGTGAGCTTCCAGCTGCTGCGATTCTTCCTGGAGGACGATGCCGAGCTGGAGC 1200
consensus_9268#1      ACATTGACGTGAGCTTCCAGCTGCTGCGGTTCTTCCTGGAGGATGATGCCGAGCTGGAGC 348
consensus_9268#2      ACGGGTA----------------------------------------------------- 101
                      **    *                                                     

consensus_9268#0      GCATCCGGGTCGCGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGA 1260
consensus_9268#1      GCATCCGGGTCGCGTACGGCAAGGGCGAGCTGCTCAGCGGCGAAATGAAGAAGATCGCGA 408
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      TCGACACGCTGCAACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGACGTGGCGGATG 1320
consensus_9268#1      TCGACACGCTGCAACCGATCGTGGAGGAGCATCAGAACCGGCGGAAGGAAGTGACGGATG 468
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      AGGTGCTTAATCTG-TTCCTTACGCCCAGGAAGCTCAACTACGAGTTCACCGTAAAGCTG 1379
consensus_9268#1      AGGTGCTTAACCTGGTTCCTTACGCCCAGGAAGCTGAACTACGAGTTCACAGTAAAGCTG 528
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CCCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAAAGATAAGAAGGCG 1439
consensus_9268#1      CCCGGCGATAGTGCGAACGGGGCGGAGGGAGCGAAGAAGAAGGGCAA------------- 575
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      GCTAAGCCGAATTAGCGACGATTGTGTGGCAAATACACATCGCGGTTGGTCGCATTCGGG 1499
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CATGCAATTATCGGTACTTTAGAGGATTATGATAAGGGCGGCGTAACACACGTCGCTAAT 1559
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CATTTTCCGCGTTCGGCAGCAGTGCTTCTATGGATTTGAACGGTACGGAAGTACCTGTTC 1619
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      CGCGAATTACTTCACCCCCAAGCCACACCAACACGGAACACTTCGGTTGGTGGTGGTGCT 1679
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      GTGGAAACATTTATTTATTTTATTTTTAGCCGCGTCGTTGCTTTGCTTACTGCAAGTAAA 1739
consensus_9268#1      ------------------------------------------------------------
consensus_9268#2      ------------------------------------------------------------
                                                                                  

consensus_9268#0      ACTAAATGCACGGTGATGAATAAACGTGATGGTTAAAAAAAA 1781
consensus_9268#1      ------------------------------------------
consensus_9268#2      ------------------------------------------